Sister chromatid cohesion 1 protein 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rad21_Rec8 | PF04824 | 504 - 556 | 2.2e-19 | Conserved region of Rad21 / Rec8 like protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AarI | CACCTGC | 1 cut(s) | 667 |
| Acc36I | ACCTGC | 2 cut(s) | 667, 1005 |
| AccBSI | CCGCTC | 1 cut(s) | 1562 |
| AccI | GTMKAC | 1 cut(s) | 782 |
| AciI | CCGC | 1 cut(s) | 1562 |
| AclWI | GGATC | 5 cut(s) | 147, 353, 386, 1188, 1331 |
| AcoI | YGGCCR | 1 cut(s) | 43 |
| AcsI | RAATTY | 2 cut(s) | 1069, 1174 |
| AcuI | CTGAAG | 2 cut(s) | 714, 906 |
| AfaI | GTAC | 1 cut(s) | 707 |
| AfiI | CCNNNNNNNGG | 4 cut(s) | 136, 547, 854, 1636 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 702, 734 |
| AluBI | AGCT | 8 cut(s) | 77, 209, 233, 818, 875, 889, 1148, 1206 |
| AluI | AGCT | 8 cut(s) | 77, 209, 233, 818, 875, 889, 1148, 1206 |
| Alw21I | GWGCWC | 4 cut(s) | 79, 129, 211, 1208 |
| Alw26I | GTCTC | 1 cut(s) | 291 |
| Alw44I | GTGCAC | 1 cut(s) | 125 |
| AlwI | GGATC | 5 cut(s) | 147, 353, 386, 1188, 1331 |
| Ama87I | CYCGRG | 1 cut(s) | 239 |
| AoxI | GGCC | 5 cut(s) | 43, 213, 629, 1372, 1507 |
| ApaLI | GTGCAC | 1 cut(s) | 125 |
| ApeKI | GCWGC | 1 cut(s) | 811 |
| ApoI | RAATTY | 2 cut(s) | 1069, 1174 |
| Asp700I | GAANNNNTTC | 3 cut(s) | 60, 1011, 1237 |
| AspS9I | GGNCC | 4 cut(s) | 1373, 1409, 1508, 1658 |
| AsuC2I | CCSGG | 3 cut(s) | 849, 1160, 1503 |
| AsuHPI | GGTGA | 5 cut(s) | 178, 284, 293, 909, 960 |
| AsuII | TTCGAA | 1 cut(s) | 1471 |
| AvaI | CYCGRG | 1 cut(s) | 239 |
| AvaII | GGWCC | 2 cut(s) | 1409, 1658 |
| AxyI | CCTNAGG | 1 cut(s) | 363 |
| BaeGI | GKGCMC | 1 cut(s) | 129 |
| BanII | GRGCYC | 4 cut(s) | 79, 211, 483, 1208 |
| BauI | CACGAG | 1 cut(s) | 1599 |
| BbsI | GAAGAC | 2 cut(s) | 125, 754 |
| Bbv12I | GWGCWC | 4 cut(s) | 79, 129, 211, 1208 |
| BbvI | GCAGC | 1 cut(s) | 823 |
| BccI | CCATC | 6 cut(s) | 403, 699, 964, 1205, 1286, 1393 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 915, 949 |
| BciVI | GTATCC | 1 cut(s) | 346 |
| BcnI | CCSGG | 3 cut(s) | 849, 1160, 1503 |
| BcoDI | GTCTC | 1 cut(s) | 291 |
| BfaI | CTAG | 2 cut(s) | 819, 1653 |
| BfuAI | ACCTGC | 2 cut(s) | 667, 1005 |
| BfuI | GTATCC | 1 cut(s) | 346 |
| BglII | AGATCT | 1 cut(s) | 262 |
| BisI | GCNGC | 2 cut(s) | 812, 1563 |
| BlsI | GCNGC | 2 cut(s) | 813, 1564 |
| Bme1390I | CCNGG | 3 cut(s) | 849, 1160, 1503 |
| Bme18I | GGWCC | 2 cut(s) | 1409, 1658 |
| BmeT110I | CYCGRG | 1 cut(s) | 239 |
| BmgT120I | GGNCC | 4 cut(s) | 1373, 1409, 1508, 1658 |
| BmiI | GGNNCC | 1 cut(s) | 1030 |
| BmrFI | CCNGG | 3 cut(s) | 849, 1160, 1503 |
| BmrI | ACTGGG | 1 cut(s) | 1027 |
| BmsI | GCATC | 6 cut(s) | 259, 391, 553, 576, 582, 1453 |
| BmuI | ACTGGG | 1 cut(s) | 1027 |
| BpiI | GAAGAC | 2 cut(s) | 125, 754 |
| BpmI | CTGGAG | 2 cut(s) | 74, 933 |
| Bpu10I | CCTNAGC | 3 cut(s) | 210, 1202, 1383 |
| Bpu14I | TTCGAA | 1 cut(s) | 1471 |
| BpuEI | CTTGAG | 1 cut(s) | 1497 |
| BpuMI | CCSGG | 3 cut(s) | 849, 1160, 1503 |
| BsaBI | GATNNNNATC | 3 cut(s) | 249, 261, 357 |
| BsaJI | CCNNGG | 1 cut(s) | 240 |
| Bsc4I | CCNNNNNNNGG | 4 cut(s) | 136, 547, 854, 1636 |
| Bse118I | RCCGGY | 1 cut(s) | 329 |
| Bse1I | ACTGG | 6 cut(s) | 91, 354, 1033, 1304, 1411, 1452 |
| Bse21I | CCTNAGG | 1 cut(s) | 363 |
| Bse3DI | GCAATG | 2 cut(s) | 374, 1294 |
| Bse8I | GATNNNNATC | 3 cut(s) | 249, 261, 357 |
| BseDI | CCNNGG | 1 cut(s) | 240 |
| BseGI | GGATG | 5 cut(s) | 250, 691, 1197, 1328, 1645 |
| BseJI | GATNNNNATC | 3 cut(s) | 249, 261, 357 |
| BseLI | CCNNNNNNNGG | 4 cut(s) | 136, 547, 854, 1636 |
| BseMI | GCAATG | 2 cut(s) | 374, 1294 |
| BseMII | CTCAG | 4 cut(s) | 224, 354, 1193, 1374 |
| BseNI | ACTGG | 6 cut(s) | 91, 354, 1033, 1304, 1411, 1452 |
| BseRI | GAGGAG | 4 cut(s) | 655, 867, 1198, 1572 |
| BseSI | GKGCMC | 1 cut(s) | 129 |
| BseXI | GCAGC | 1 cut(s) | 823 |
| BshFI | GGCC | 5 cut(s) | 45, 215, 631, 1374, 1509 |
| BsiHKAI | GWGCWC | 4 cut(s) | 79, 129, 211, 1208 |
| BsiHKCI | CYCGRG | 1 cut(s) | 239 |
| BsiSI | CCGG | 4 cut(s) | 330, 849, 1160, 1502 |
| BslI | CCNNNNNNNGG | 4 cut(s) | 136, 547, 854, 1636 |
| BsmAI | GTCTC | 1 cut(s) | 291 |
| BsmI | GAATGC | 1 cut(s) | 1330 |
| BsnI | GGCC | 5 cut(s) | 45, 215, 631, 1374, 1509 |
| BsoBI | CYCGRG | 1 cut(s) | 239 |
| Bsp119I | TTCGAA | 1 cut(s) | 1471 |
| Bsp1286I | GDGCHC | 5 cut(s) | 79, 129, 211, 483, 1208 |
| Bsp143I | GATC | 7 cut(s) | 139, 262, 358, 391, 613, 1193, 1336 |
| BspACI | CCGC | 1 cut(s) | 1562 |
| BspANI | GGCC | 5 cut(s) | 45, 215, 631, 1374, 1509 |
| BspCNI | CTCAG | 4 cut(s) | 223, 355, 1194, 1375 |
| BspHI | TCATGA | 1 cut(s) | 118 |
| BspLI | GGNNCC | 1 cut(s) | 1030 |
| BspMI | ACCTGC | 2 cut(s) | 667, 1005 |
| BspPI | GGATC | 5 cut(s) | 147, 353, 386, 1188, 1331 |
| BspT104I | TTCGAA | 1 cut(s) | 1471 |
| BsrBI | CCGCTC | 1 cut(s) | 1562 |
| BsrDI | GCAATG | 2 cut(s) | 374, 1294 |
| BsrFI | RCCGGY | 1 cut(s) | 329 |
| BsrI | ACTGG | 6 cut(s) | 91, 354, 1033, 1304, 1411, 1452 |
| BssAI | RCCGGY | 1 cut(s) | 329 |
| BssECI | CCNNGG | 1 cut(s) | 240 |
| BssMI | GATC | 7 cut(s) | 139, 262, 358, 391, 613, 1193, 1336 |
| BssSI | CACGAG | 1 cut(s) | 1599 |
| Bst2BI | CACGAG | 1 cut(s) | 1599 |
| Bst4CI | ACNGT | 2 cut(s) | 131, 1238 |
| Bst6I | CTCTTC | 3 cut(s) | 51, 1256, 1549 |
| BstBI | TTCGAA | 1 cut(s) | 1471 |
| BstC8I | GCNNGC | 3 cut(s) | 28, 561, 816 |
| BstDEI | CTNAG | 6 cut(s) | 210, 363, 883, 1016, 1202, 1383 |
| BstEII | GGTNACC | 1 cut(s) | 966 |
| BstF5I | GGATG | 5 cut(s) | 250, 691, 1197, 1328, 1645 |
| BstKTI | GATC | 7 cut(s) | 142, 265, 361, 394, 616, 1196, 1339 |
| BstMAI | GTCTC | 1 cut(s) | 291 |
| BstMBI | GATC | 7 cut(s) | 139, 262, 358, 391, 613, 1193, 1336 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 51, 83, 943 |
| BstNSI | RCATGY | 1 cut(s) | 410 |
| BstPI | GGTNACC | 1 cut(s) | 966 |
| BstSCI | CCNGG | 3 cut(s) | 847, 1158, 1501 |
| BstSLI | GKGCMC | 1 cut(s) | 129 |
| BstV1I | GCAGC | 1 cut(s) | 823 |
| BstV2I | GAAGAC | 2 cut(s) | 125, 754 |
| BstX2I | RGATCY | 2 cut(s) | 262, 1193 |
| BstXI | CCANNNNNNTGG | 2 cut(s) | 963, 1474 |
| BstYI | RGATCY | 2 cut(s) | 262, 1193 |
| Bsu36I | CCTNAGG | 1 cut(s) | 363 |
| BsuI | GTATCC | 1 cut(s) | 346 |
| BsuRI | GGCC | 5 cut(s) | 45, 215, 631, 1374, 1509 |
| BtgZI | GCGATG | 1 cut(s) | 1197 |
| BtsCI | GGATG | 5 cut(s) | 250, 691, 1197, 1328, 1645 |
| BtsIMutI | CAGTG | 1 cut(s) | 1445 |
| BveI | ACCTGC | 2 cut(s) | 667, 1005 |
| Cac8I | GCNNGC | 3 cut(s) | 28, 561, 816 |
| CciI | TCATGA | 1 cut(s) | 118 |
| Cfr10I | RCCGGY | 1 cut(s) | 329 |
| Cfr13I | GGNCC | 4 cut(s) | 1373, 1409, 1508, 1658 |
| Csp6I | GTAC | 1 cut(s) | 706 |
| CviQI | GTAC | 1 cut(s) | 706 |
| DdeI | CTNAG | 6 cut(s) | 210, 363, 883, 1016, 1202, 1383 |
| DpnI | GATC | 7 cut(s) | 141, 264, 360, 393, 615, 1195, 1338 |
| DpnII | GATC | 7 cut(s) | 139, 262, 358, 391, 613, 1193, 1336 |
| DraI | TTTAAA | 1 cut(s) | 844 |
| EaeI | YGGCCR | 1 cut(s) | 43 |
| Eam1104I | CTCTTC | 3 cut(s) | 51, 1256, 1549 |
| EarI | CTCTTC | 3 cut(s) | 51, 1256, 1549 |
| Ecl136II | GAGCTC | 3 cut(s) | 77, 209, 1206 |
| Eco147I | AGGCCT | 1 cut(s) | 631 |
| Eco24I | GRGCYC | 4 cut(s) | 79, 211, 483, 1208 |
| Eco32I | GATATC | 1 cut(s) | 370 |
| Eco47I | GGWCC | 2 cut(s) | 1409, 1658 |
| Eco53kI | GAGCTC | 3 cut(s) | 77, 209, 1206 |
| Eco57I | CTGAAG | 2 cut(s) | 714, 906 |
| Eco81I | CCTNAGG | 1 cut(s) | 363 |
| Eco88I | CYCGRG | 1 cut(s) | 239 |
| Eco91I | GGTNACC | 1 cut(s) | 966 |
| EcoICRI | GAGCTC | 3 cut(s) | 77, 209, 1206 |
| EcoO65I | GGTNACC | 1 cut(s) | 966 |
| EcoRV | GATATC | 1 cut(s) | 370 |
| EcoT38I | GRGCYC | 4 cut(s) | 79, 211, 483, 1208 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 999, 1031 |
| FblI | GTMKAC | 1 cut(s) | 782 |
| Fnu4HI | GCNGC | 2 cut(s) | 812, 1563 |
| FokI | GGATG | 5 cut(s) | 257, 678, 1184, 1335, 1652 |
| FriOI | GRGCYC | 4 cut(s) | 79, 211, 483, 1208 |
| Fsp4HI | GCNGC | 2 cut(s) | 812, 1563 |
| FspBI | CTAG | 2 cut(s) | 819, 1653 |
| GluI | GCNGC | 2 cut(s) | 812, 1563 |
| GsuI | CTGGAG | 2 cut(s) | 74, 933 |
| HaeIII | GGCC | 5 cut(s) | 45, 215, 631, 1374, 1509 |
| HapII | CCGG | 4 cut(s) | 330, 849, 1160, 1502 |
| HincII | GTYRAC | 2 cut(s) | 1078, 1228 |
| HindII | GTYRAC | 2 cut(s) | 1078, 1228 |
| HinfI | GANTC | 7 cut(s) | 61, 67, 109, 182, 914, 1520, 1549 |
| HpaI | GTTAAC | 2 cut(s) | 1078, 1228 |
| HpaII | CCGG | 4 cut(s) | 330, 849, 1160, 1502 |
| HphI | GGTGA | 5 cut(s) | 178, 284, 293, 909, 960 |
| Hpy166II | GTNNAC | 6 cut(s) | 127, 706, 783, 800, 1078, 1228 |
| Hpy188I | TCNGA | 5 cut(s) | 66, 400, 733, 1243, 1336 |
| Hpy8I | GTNNAC | 6 cut(s) | 127, 706, 783, 800, 1078, 1228 |
| HpyAV | CCTTC | 5 cut(s) | 157, 510, 531, 545, 930 |
| HpyCH4III | ACNGT | 2 cut(s) | 131, 1238 |
| HpyCH4IV | ACGT | 2 cut(s) | 1086, 1350 |
| HpyCH4V | TGCA | 6 cut(s) | 127, 346, 404, 410, 589, 595 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 51, 83, 943 |
| HpyF3I | CTNAG | 6 cut(s) | 210, 363, 883, 1016, 1202, 1383 |
| HpySE526I | ACGT | 2 cut(s) | 1086, 1350 |
| KspAI | GTTAAC | 2 cut(s) | 1078, 1228 |
| Kzo9I | GATC | 7 cut(s) | 139, 262, 358, 391, 613, 1193, 1336 |
| LmnI | GCTCC | 8 cut(s) | 82, 642, 808, 880, 1034, 1145, 1211, 1559 |
| Lsp1109I | GCAGC | 1 cut(s) | 823 |
| LweI | GCATC | 6 cut(s) | 259, 391, 553, 576, 582, 1453 |
| MaeI | CTAG | 2 cut(s) | 819, 1653 |
| MaeII | ACGT | 2 cut(s) | 1086, 1350 |
| MaeIII | GTNAC | 5 cut(s) | 272, 966, 1042, 1087, 1456 |
| MalI | GATC | 7 cut(s) | 141, 264, 360, 393, 615, 1195, 1338 |
| MbiI | CCGCTC | 1 cut(s) | 1562 |
| MboI | GATC | 7 cut(s) | 139, 262, 358, 391, 613, 1193, 1336 |
| MboII | GAAGA | 9 cut(s) | 68, 125, 172, 759, 765, 1019, 1203, 1273, 1566 |
| MflI | RGATCY | 2 cut(s) | 262, 1193 |
| MhlI | GDGCHC | 5 cut(s) | 79, 129, 211, 483, 1208 |
| MluCI | AATT | 8 cut(s) | 143, 444, 508, 1069, 1174, 1249, 1391, 1623 |
| MlyI | GAGTC | 3 cut(s) | 118, 176, 908 |
| MroXI | GAANNNNTTC | 3 cut(s) | 60, 1011, 1237 |
| MseI | TTAA | 6 cut(s) | 146, 843, 929, 1077, 1227, 1617 |
| MslI | CAYNNNNRTG | 5 cut(s) | 120, 909, 961, 1287, 1472 |
| MspI | CCGG | 4 cut(s) | 330, 849, 1160, 1502 |
| MspR9I | CCNGG | 3 cut(s) | 849, 1160, 1503 |
| Mva1269I | GAATGC | 1 cut(s) | 1330 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 51, 83, 943 |
| NciI | CCSGG | 3 cut(s) | 849, 1160, 1503 |
| NdeII | GATC | 7 cut(s) | 139, 262, 358, 391, 613, 1193, 1336 |
| NlaIV | GGNNCC | 1 cut(s) | 1030 |
| NmeAIII | GCCGAG | 1 cut(s) | 21 |
| NmuCI | GTSAC | 3 cut(s) | 272, 966, 1456 |
| NspI | RCATGY | 1 cut(s) | 410 |
| NspV | TTCGAA | 1 cut(s) | 1471 |
| PagI | TCATGA | 1 cut(s) | 118 |
| PaqCI | CACCTGC | 1 cut(s) | 667 |
| PceI | AGGCCT | 1 cut(s) | 631 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1264 |
| PctI | GAATGC | 1 cut(s) | 1330 |
| PdmI | GAANNNNTTC | 3 cut(s) | 60, 1011, 1237 |
| PfeI | GAWTC | 4 cut(s) | 61, 67, 1520, 1549 |
| PkrI | GCNGC | 2 cut(s) | 813, 1564 |
| PleI | GAGTC | 3 cut(s) | 117, 176, 908 |
| PpsI | GAGTC | 3 cut(s) | 117, 176, 908 |
| Psp124BI | GAGCTC | 3 cut(s) | 79, 211, 1208 |
| PspEI | GGTNACC | 1 cut(s) | 966 |
| PspN4I | GGNNCC | 1 cut(s) | 1030 |
| PspPI | GGNCC | 4 cut(s) | 1373, 1409, 1508, 1658 |
| PsuI | RGATCY | 2 cut(s) | 262, 1193 |
| RsaI | GTAC | 1 cut(s) | 707 |
| RsaNI | GTAC | 1 cut(s) | 706 |
| RseI | CAYNNNNRTG | 5 cut(s) | 120, 909, 961, 1287, 1472 |
| SacI | GAGCTC | 3 cut(s) | 79, 211, 1208 |
| SaqAI | TTAA | 6 cut(s) | 146, 843, 929, 1077, 1227, 1617 |
| SatI | GCNGC | 2 cut(s) | 812, 1563 |
| Sau3AI | GATC | 7 cut(s) | 139, 262, 358, 391, 613, 1193, 1336 |
| Sau96I | GGNCC | 4 cut(s) | 1373, 1409, 1508, 1658 |
| SchI | GAGTC | 3 cut(s) | 118, 176, 908 |
| ScrFI | CCNGG | 3 cut(s) | 849, 1160, 1503 |
| SduI | GDGCHC | 5 cut(s) | 79, 129, 211, 483, 1208 |
| SfaNI | GCATC | 6 cut(s) | 259, 391, 553, 576, 582, 1453 |
| SfuI | TTCGAA | 1 cut(s) | 1471 |
| SinI | GGWCC | 2 cut(s) | 1409, 1658 |
| SmiMI | CAYNNNNRTG | 5 cut(s) | 120, 909, 961, 1287, 1472 |
| SmlI | CTYRAG | 1 cut(s) | 1512 |
| SmoI | CTYRAG | 1 cut(s) | 1512 |
| Sse9I | AATT | 8 cut(s) | 143, 444, 508, 1069, 1174, 1249, 1391, 1623 |
| SseBI | AGGCCT | 1 cut(s) | 631 |
| SsiI | CCGC | 1 cut(s) | 1562 |
| SspI | AATATT | 1 cut(s) | 793 |
| SspMI | CTAG | 2 cut(s) | 819, 1653 |
| SstI | GAGCTC | 3 cut(s) | 79, 211, 1208 |
| StuI | AGGCCT | 1 cut(s) | 631 |
| StyD4I | CCNGG | 3 cut(s) | 847, 1158, 1501 |
| TaaI | ACNGT | 2 cut(s) | 131, 1238 |
| TaiI | ACGT | 2 cut(s) | 1089, 1353 |
| TaqI | TCGA | 5 cut(s) | 279, 493, 616, 1471, 1552 |
| TaqII | GACCGA | 1 cut(s) | 1426 |
| TasI | AATT | 8 cut(s) | 143, 444, 508, 1069, 1174, 1249, 1391, 1623 |
| TauI | GCSGC | 1 cut(s) | 1565 |
| TfiI | GAWTC | 4 cut(s) | 61, 67, 1520, 1549 |
| Tru1I | TTAA | 6 cut(s) | 146, 843, 929, 1077, 1227, 1617 |
| Tru9I | TTAA | 6 cut(s) | 146, 843, 929, 1077, 1227, 1617 |
| TscAI | CASTG | 1 cut(s) | 1452 |
| TseFI | GTSAC | 3 cut(s) | 272, 966, 1456 |
| TseI | GCWGC | 1 cut(s) | 811 |
| Tsp45I | GTSAC | 3 cut(s) | 272, 966, 1456 |
| TspDTI | ATGAA | 6 cut(s) | 594, 803, 1154, 1263, 1404, 1562 |
| TspGWI | ACGGA | 3 cut(s) | 217, 1078, 1273 |
| TspRI | CASTG | 1 cut(s) | 1452 |
| VneI | GTGCAC | 1 cut(s) | 125 |
| VpaK11BI | GGWCC | 2 cut(s) | 1409, 1658 |
| XapI | RAATTY | 2 cut(s) | 1069, 1174 |
| XceI | RCATGY | 1 cut(s) | 410 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 98 |
| XmiI | GTMKAC | 1 cut(s) | 782 |
| XmnI | GAANNNNTTC | 3 cut(s) | 60, 1011, 1237 |
| XspI | CTAG | 2 cut(s) | 819, 1653 |