Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0000112.1

Orthogroup ID

OG0000542

Physical Location & Seq

Genomic Coordinates Forward (+)

35814 .. 42149

Gene Structure 6336 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0000112.1_g000006.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1530 bp

atggccgccaccatgcacgccaagatgaaccgcaggaatctctaccagatcgacctcatcagaatctgcgaagagattctgaatccaagagctcctatggctctccgactctccagtattctcatgggtggagtcgtcatcgtctacgaacgtaaagtgaagctcctattcggtacccttccccttctttttttgctgaaagaagcaataactctgcctgaggctgagcatcaagatacagatcttgttggtgacatcgagcagtctcttgatttctctcaccatgccacgctattccagcagcaaaccggctattttctcatggtaaatgaccttaatgggctctactttcctggagattccccgagttctcaactggatagtgtagatgtgggagaaccacttaacgataatgcagcggagggagatcaacctcggaacttacatcaagctgatcctgaggatatcacattgcctaaatgttatcatccatcagatgcacatgcagatttgttcaaccctcgctttgagagatttgaaattgagggagataacgtagacctcacatcaggagagcccacacacattcgaccaccttctccaaattatctaataccttctccacctcgtcaagaccagcatcaggaaggacagcagactaataatgtgtttgatgaagtggtgcagatgcaggatgttcaagagaatgctcaacagaggcagaggcctataaggaggagaaagagaaaaacaccaggctctgtaatggataatgaccaaacaatccatcctggacatgtgtaccaatcttggcttcaagatacttcagatatagtttcaagaagaagaagaaaccagaagcccaagaacataatgtctactatgaagattggtaaactcatggagcagccagctagtgttctcatgggtcgtttatttaaacctggaagtggagaaacatattacccagctcctctcttagagctattcaaggaaaaacatacccatgactcaccttctgcattcacctcgccacctctgcctctagaaccatcatcatggtcaccacctggaagacaaacttatcaagacctgcctgttgaagattttcttagtggagccaatcttattggcaagagaggagctgatgccaatctggcaacaccaagaaattctggagatgaaagaagatccgtcctgagctcctcatctgggaaggcagggcgcaagcggcgacagttgacgacggcggtacttgaagacgtcgatcggcgactgagaacctcgcaacggcacgaaggtctcgagaatggaagcgatgctggtgacgaggtccttgatgatgaggtagacctggccgggcttgaaatccttgaccagaaaaagagagaacttgacgagttaaagcttaccggtggagtgattgacccaggagaggacatcgaagacgagttgctcgccgcagccggccatggggatgttatgggagatgctgatgcaggtggcgatggggagggtggtgcctattaa

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006323 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008152 GO:0008278 GO:0008608 GO:0009987 GO:0010032 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0046483 GO:0048285 GO:0050896 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051716 GO:0051754 GO:0061982 GO:0061983 GO:0070013 GO:0070192 GO:0070601 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

509

Amino Acids

56.64

Weight (kDa)

5.0

Isoelectric Point (pI)

58.39

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05490 AT5G05490
fragaria_vesca	FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica	MD12G1179600.v1.1
prunus_persica	Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis	pycom12g16940
rosa_chinensis	RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata	RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora	Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa	Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha	Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana	Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AarI	CACCTGC	1 cut(s)	1490
AatII	GACGTC	1 cut(s)	1266
Acc36I	ACCTGC	2 cut(s)	1101, 1490
Acc65I	GGTACC	1 cut(s)	173
AccB1I	GGYRCC	2 cut(s)	173, 1520
AccI	GTMKAC	4 cut(s)	144, 558, 878, 1350
AciI	CCGC	6 cut(s)	6, 31, 419, 1231, 1250, 1461
AclWI	GGATC	2 cut(s)	449, 1185
AcoI	YGGCCR	3 cut(s)	3, 1356, 1468
AcsI	RAATTY	1 cut(s)	1171
AcuI	CTGAAG	1 cut(s)	810
AcyI	GRCGYC	1 cut(s)	1263
AfaI	GTAC	3 cut(s)	175, 803, 1254
AfiI	CCNNNNNNNGG	6 cut(s)	643, 950, 1212, 1290, 1435, 1473
AflIII	ACRYGT	1 cut(s)	796
AgeI	ACCGGT	1 cut(s)	1412
AgsI	TTSAA	9 cut(s)	517, 539, 701, 818, 840, 991, 1103, 1259, 1367
AjnI	CCWGG	7 cut(s)	352, 754, 790, 943, 1069, 1353, 1429
AjuI	GAANNNNNNNTTGG	2 cut(s)	798, 830
AluBI	AGCT	9 cut(s)	92, 163, 452, 914, 971, 985, 1145, 1203, 1408
AluI	AGCT	9 cut(s)	92, 163, 452, 914, 971, 985, 1145, 1203, 1408
Alw21I	GWGCWC	2 cut(s)	94, 1205
Alw26I	GTCTC	2 cut(s)	270, 1307
AlwI	GGATC	2 cut(s)	449, 1185
AlwNI	CAGNNNCTG	2 cut(s)	66, 761
Ama87I	CYCGRG	2 cut(s)	364, 1304
AoxI	GGCC	4 cut(s)	3, 725, 1356, 1468
ApeKI	GCWGC	4 cut(s)	301, 416, 907, 1463
ApoI	RAATTY	1 cut(s)	1171
AsiGI	ACCGGT	1 cut(s)	1412
Asp700I	GAANNNNTTC	2 cut(s)	75, 1107
Asp718I	GGTACC	1 cut(s)	173
AspLEI	GCGC	1 cut(s)	1227
AspS9I	GGNCC	1 cut(s)	1333
AsuC2I	CCSGG	1 cut(s)	1360
AsuHPI	GGTGA	6 cut(s)	263, 272, 1005, 1018, 1056, 1337
AvaI	CYCGRG	2 cut(s)	364, 1304
AvaII	GGWCC	1 cut(s)	1333
AxyI	CCTNAGG	2 cut(s)	219, 459
BaeI	ACNNNNGTAYC	2 cut(s)	785, 818
BanI	GGYRCC	2 cut(s)	173, 1520
BanII	GRGCYC	4 cut(s)	94, 345, 579, 1205
BbsI	GAAGAC	3 cut(s)	1081, 1266, 1452
Bbv12I	GWGCWC	2 cut(s)	94, 1205
BbvI	GCAGC	4 cut(s)	313, 428, 919, 1475
BccI	CCATC	4 cut(s)	499, 795, 1060, 1502
BceAI	ACGGC	2 cut(s)	1263, 1307
BcgI	CGANNNNNNTGC	2 cut(s)	1011, 1045
BciT130I	CCWGG	7 cut(s)	354, 756, 792, 945, 1071, 1355, 1431
BcnI	CCSGG	1 cut(s)	1360
BcoDI	GTCTC	2 cut(s)	270, 1307
BfaI	CTAG	2 cut(s)	915, 1046
BfuAI	ACCTGC	2 cut(s)	1101, 1490
BglI	GCCNNNNNGGC	1 cut(s)	1157
BglII	AGATCT	1 cut(s)	241
BisI	GCNGC	7 cut(s)	6, 302, 417, 908, 1232, 1461, 1464
BlpI	GCTNAGC	1 cut(s)	225
BlsI	GCNGC	7 cut(s)	7, 303, 418, 909, 1233, 1462, 1465
Bme1390I	CCNGG	8 cut(s)	354, 756, 792, 945, 1071, 1355, 1360, 1431
Bme18I	GGWCC	1 cut(s)	1333
BmeT110I	CYCGRG	2 cut(s)	364, 1304
BmgT120I	GGNCC	1 cut(s)	1333
BmiI	GGNNCC	3 cut(s)	175, 1120, 1522
BmrFI	CCNGG	8 cut(s)	354, 756, 792, 945, 1071, 1355, 1360, 1431
BmsI	GCATC	8 cut(s)	238, 487, 649, 678, 1138, 1309, 1480, 1486
BpiI	GAAGAC	3 cut(s)	1081, 1266, 1452
BpmI	CTGGAG	3 cut(s)	97, 375, 1197
Bpu10I	CCTNAGC	1 cut(s)	1199
Bpu1102I	GCTNAGC	1 cut(s)	225
BpuMI	CCSGG	1 cut(s)	1360
BsaBI	GATNNNNATC	2 cut(s)	240, 1152
BsaHI	GRCGYC	1 cut(s)	1263
BsaI	GGTCTC	1 cut(s)	1307
BsaJI	CCNNGG	3 cut(s)	434, 1429, 1471
BsaWI	WCCGGW	1 cut(s)	1412
BsaXI	ACNNNNNCTCC	2 cut(s)	540, 570
Bsc4I	CCNNNNNNNGG	6 cut(s)	643, 950, 1212, 1290, 1435, 1473
Bse118I	RCCGGY	3 cut(s)	308, 1412, 1466
Bse1I	ACTGG	2 cut(s)	114, 381
Bse21I	CCTNAGG	2 cut(s)	219, 459
Bse3DI	GCAATG	1 cut(s)	470
Bse8I	GATNNNNATC	2 cut(s)	240, 1152
BseBI	CCWGG	7 cut(s)	354, 756, 792, 945, 1071, 1355, 1431
BseDI	CCNNGG	3 cut(s)	434, 1429, 1471
BseGI	GGATG	4 cut(s)	487, 700, 787, 1483
BseJI	GATNNNNATC	2 cut(s)	240, 1152
BseLI	CCNNNNNNNGG	6 cut(s)	643, 950, 1212, 1290, 1435, 1473
BseMI	GCAATG	1 cut(s)	470
BseMII	CTCAG	5 cut(s)	210, 216, 450, 1190, 1268
BseNI	ACTGG	2 cut(s)	114, 381
BseRI	GAGGAG	4 cut(s)	751, 963, 1155, 1195
BseXI	GCAGC	4 cut(s)	313, 428, 919, 1475
BseYI	CCCAGC	1 cut(s)	967
BsgI	GTGCAG	1 cut(s)	704
Bsh1285I	CGRYCG	1 cut(s)	1270
BshFI	GGCC	4 cut(s)	5, 727, 1358, 1470
BshNI	GGYRCC	2 cut(s)	173, 1520
BshTI	ACCGGT	1 cut(s)	1412
BsiEI	CGRYCG	1 cut(s)	1270
BsiHKAI	GWGCWC	2 cut(s)	94, 1205
BsiHKCI	CYCGRG	2 cut(s)	364, 1304
BsiSI	CCGG	4 cut(s)	309, 1359, 1413, 1467
BslI	CCNNNNNNNGG	6 cut(s)	643, 950, 1212, 1290, 1435, 1473
BsmAI	GTCTC	2 cut(s)	270, 1307
BsmI	GAATGC	2 cut(s)	712, 1022
BsnI	GGCC	4 cut(s)	5, 727, 1358, 1470
Bso31I	GGTCTC	1 cut(s)	1307
BsoBI	CYCGRG	2 cut(s)	364, 1304
Bsp1286I	GDGCHC	4 cut(s)	94, 345, 579, 1205
Bsp143I	GATC	6 cut(s)	48, 241, 427, 454, 1190, 1267
Bsp1720I	GCTNAGC	1 cut(s)	225
Bsp19I	CCATGG	1 cut(s)	1471
BspACI	CCGC	6 cut(s)	6, 31, 419, 1231, 1250, 1461
BspANI	GGCC	4 cut(s)	5, 727, 1358, 1470
BspCNI	CTCAG	5 cut(s)	211, 217, 451, 1191, 1269
BspLI	GGNNCC	3 cut(s)	175, 1120, 1522
BspMI	ACCTGC	2 cut(s)	1101, 1490
BspPI	GGATC	2 cut(s)	449, 1185
BspT107I	GGYRCC	2 cut(s)	173, 1520
BspTNI	GGTCTC	1 cut(s)	1307
BsrDI	GCAATG	1 cut(s)	470
BsrFI	RCCGGY	3 cut(s)	308, 1412, 1466
BsrI	ACTGG	2 cut(s)	114, 381
BssAI	RCCGGY	3 cut(s)	308, 1412, 1466
BssECI	CCNNGG	3 cut(s)	434, 1429, 1471
BssMI	GATC	6 cut(s)	48, 241, 427, 454, 1190, 1267
BssNI	GRCGYC	1 cut(s)	1263
BssT1I	CCWWGG	1 cut(s)	1471
Bst2UI	CCWGG	7 cut(s)	354, 756, 792, 945, 1071, 1355, 1431
Bst4CI	ACNGT	1 cut(s)	1239
Bst6I	CTCTTC	1 cut(s)	66
BstACI	GRCGYC	1 cut(s)	1263
BstC8I	GCNNGC	5 cut(s)	18, 912, 1229, 1458, 1468
BstDEI	CTNAG	7 cut(s)	219, 225, 459, 979, 1112, 1199, 1277
BstDSI	CCRYGG	1 cut(s)	1471
BstEII	GGTNACC	1 cut(s)	1062
BstF5I	GGATG	4 cut(s)	487, 700, 787, 1483
BstHHI	GCGC	1 cut(s)	1227
BstKTI	GATC	6 cut(s)	51, 244, 430, 457, 1193, 1270
BstMAI	GTCTC	2 cut(s)	270, 1307
BstMBI	GATC	6 cut(s)	48, 241, 427, 454, 1190, 1267
BstMCI	CGRYCG	1 cut(s)	1270
BstMWI	GCNNNNNNNGC	5 cut(s)	98, 298, 1039, 1157, 1231
BstNI	CCWGG	7 cut(s)	354, 756, 792, 945, 1071, 1355, 1431
BstNSI	RCATGY	2 cut(s)	506, 800
BstPI	GGTNACC	1 cut(s)	1062
BstSCI	CCNGG	8 cut(s)	352, 754, 790, 943, 1069, 1353, 1358, 1429
BstV1I	GCAGC	4 cut(s)	313, 428, 919, 1475
BstV2I	GAAGAC	3 cut(s)	1081, 1266, 1452
BstX2I	RGATCY	2 cut(s)	241, 1190
BstXI	CCANNNNNNTGG	1 cut(s)	1059
BstYI	RGATCY	2 cut(s)	241, 1190
Bsu36I	CCTNAGG	2 cut(s)	219, 459
BsuRI	GGCC	4 cut(s)	5, 727, 1358, 1470
BtgI	CCRYGG	1 cut(s)	1471
BtgZI	GCGATG	2 cut(s)	1332, 1521
BtsCI	GGATG	4 cut(s)	487, 700, 787, 1483
BveI	ACCTGC	2 cut(s)	1101, 1490
Cac8I	GCNNGC	5 cut(s)	18, 912, 1229, 1458, 1468
CaiI	CAGNNNCTG	2 cut(s)	66, 761
CfoI	GCGC	1 cut(s)	1227
Cfr10I	RCCGGY	3 cut(s)	308, 1412, 1466
Cfr13I	GGNCC	1 cut(s)	1333
Csp6I	GTAC	3 cut(s)	174, 802, 1253
CspAI	ACCGGT	1 cut(s)	1412
CviQI	GTAC	3 cut(s)	174, 802, 1253
DdeI	CTNAG	7 cut(s)	219, 225, 459, 979, 1112, 1199, 1277
DpnI	GATC	6 cut(s)	50, 243, 429, 456, 1192, 1269
DpnII	GATC	6 cut(s)	48, 241, 427, 454, 1190, 1267
DraI	TTTAAA	1 cut(s)	940
EaeI	YGGCCR	3 cut(s)	3, 1356, 1468
Eam1104I	CTCTTC	1 cut(s)	66
EarI	CTCTTC	1 cut(s)	66
Ecl136II	GAGCTC	2 cut(s)	92, 1203
Eco130I	CCWWGG	1 cut(s)	1471
Eco147I	AGGCCT	1 cut(s)	727
Eco24I	GRGCYC	4 cut(s)	94, 345, 579, 1205
Eco31I	GGTCTC	1 cut(s)	1307
Eco32I	GATATC	1 cut(s)	466
Eco47I	GGWCC	1 cut(s)	1333
Eco53kI	GAGCTC	2 cut(s)	92, 1203
Eco57I	CTGAAG	1 cut(s)	810
Eco81I	CCTNAGG	2 cut(s)	219, 459
Eco88I	CYCGRG	2 cut(s)	364, 1304
Eco91I	GGTNACC	1 cut(s)	1062
EcoICRI	GAGCTC	2 cut(s)	92, 1203
EcoO109I	RGGNCCY	1 cut(s)	1333
EcoO65I	GGTNACC	1 cut(s)	1062
EcoRII	CCWGG	7 cut(s)	352, 754, 790, 943, 1069, 1353, 1429
EcoRV	GATATC	1 cut(s)	466
EcoT14I	CCWWGG	1 cut(s)	1471
EcoT38I	GRGCYC	4 cut(s)	94, 345, 579, 1205
ErhI	CCWWGG	1 cut(s)	1471
FalI	AAGNNNNNCTT	4 cut(s)	1066, 1098, 1095, 1127
FblI	GTMKAC	4 cut(s)	144, 558, 878, 1350
Fnu4HI	GCNGC	7 cut(s)	6, 302, 417, 908, 1232, 1461, 1464
FokI	GGATG	4 cut(s)	474, 707, 774, 1490
FriOI	GRGCYC	4 cut(s)	94, 345, 579, 1205
Fsp4HI	GCNGC	7 cut(s)	6, 302, 417, 908, 1232, 1461, 1464
FspBI	CTAG	2 cut(s)	915, 1046
GlaI	GCGC	1 cut(s)	1226
GluI	GCNGC	7 cut(s)	6, 302, 417, 908, 1232, 1461, 1464
GsaI	CCCAGC	1 cut(s)	971
GsuI	CTGGAG	3 cut(s)	97, 375, 1197
HaeIII	GGCC	4 cut(s)	5, 727, 1358, 1470
HapII	CCGG	4 cut(s)	309, 1359, 1413, 1467
HhaI	GCGC	1 cut(s)	1227
Hin1I	GRCGYC	1 cut(s)	1263
Hin6I	GCGC	1 cut(s)	1225
HinP1I	GCGC	1 cut(s)	1225
HincII	GTYRAC	1 cut(s)	1242
HindII	GTYRAC	1 cut(s)	1242
HindIII	AAGCTT	1 cut(s)	1406
HinfI	GANTC	8 cut(s)	37, 63, 76, 82, 108, 132, 359, 1010
HpaII	CCGG	4 cut(s)	309, 1359, 1413, 1467
HphI	GGTGA	6 cut(s)	263, 272, 1005, 1018, 1056, 1337
Hpy166II	GTNNAC	7 cut(s)	145, 559, 802, 879, 896, 1242, 1351
Hpy188I	TCNGA	6 cut(s)	62, 81, 107, 438, 496, 829
Hpy8I	GTNNAC	7 cut(s)	145, 559, 802, 879, 896, 1242, 1351
Hpy99I	CGWCG	2 cut(s)	1249, 1268
HpyAV	CCTTC	8 cut(s)	188, 194, 606, 627, 641, 1026, 1210, 1292
HpyCH4III	ACNGT	1 cut(s)	1239
HpyCH4IV	ACGT	3 cut(s)	151, 555, 1263
HpyCH4V	TGCA	8 cut(s)	16, 416, 500, 506, 685, 691, 1022, 1499
HpyF10VI	GCNNNNNNNGC	5 cut(s)	98, 298, 1039, 1157, 1231
HpyF3I	CTNAG	7 cut(s)	219, 225, 459, 979, 1112, 1199, 1277
HpySE526I	ACGT	3 cut(s)	151, 555, 1263
Hsp92I	GRCGYC	1 cut(s)	1263
HspAI	GCGC	1 cut(s)	1225
KpnI	GGTACC	1 cut(s)	177
KroI	GCCGGC	1 cut(s)	1466
KroNI	GCCGGC	1 cut(s)	1468
Kzo9I	GATC	6 cut(s)	48, 241, 427, 454, 1190, 1267
LmnI	GCTCC	7 cut(s)	97, 168, 904, 976, 1118, 1142, 1208
Lsp1109I	GCAGC	4 cut(s)	313, 428, 919, 1475
LweI	GCATC	8 cut(s)	238, 487, 649, 678, 1138, 1309, 1480, 1486
MaeI	CTAG	2 cut(s)	915, 1046
MaeII	ACGT	3 cut(s)	151, 555, 1263
MaeIII	GTNAC	3 cut(s)	251, 1062, 1325
MalI	GATC	6 cut(s)	50, 243, 429, 456, 1192, 1269
MboI	GATC	6 cut(s)	48, 241, 427, 454, 1190, 1267
MflI	RGATCY	2 cut(s)	241, 1190
MhlI	GDGCHC	4 cut(s)	94, 345, 579, 1205
MluCI	AATT	3 cut(s)	540, 604, 1171
MlyI	GAGTC	3 cut(s)	102, 141, 1004
MmeI	TCCRAC	1 cut(s)	130
MroNI	GCCGGC	1 cut(s)	1466
MroXI	GAANNNNTTC	2 cut(s)	75, 1107
MseI	TTAA	5 cut(s)	336, 405, 939, 1403, 1528
MslI	CAYNNNNRTG	3 cut(s)	1005, 1057, 1476
MspA1I	CMGCKG	1 cut(s)	419
MspI	CCGG	4 cut(s)	309, 1359, 1413, 1467
MspR9I	CCNGG	8 cut(s)	354, 756, 792, 945, 1071, 1355, 1360, 1431
Mva1269I	GAATGC	2 cut(s)	712, 1022
MvaI	CCWGG	7 cut(s)	354, 756, 792, 945, 1071, 1355, 1431
MwoI	GCNNNNNNNGC	5 cut(s)	98, 298, 1039, 1157, 1231
NaeI	GCCGGC	1 cut(s)	1468
NciI	CCSGG	1 cut(s)	1360
NcoI	CCATGG	1 cut(s)	1471
NdeII	GATC	6 cut(s)	48, 241, 427, 454, 1190, 1267
NgoMIV	GCCGGC	1 cut(s)	1466
NlaIV	GGNNCC	3 cut(s)	175, 1120, 1522
NmuCI	GTSAC	3 cut(s)	251, 1062, 1325
NspI	RCATGY	2 cut(s)	506, 800
PaeR7I	CTCGAG	1 cut(s)	1304
PaqCI	CACCTGC	1 cut(s)	1490
PceI	AGGCCT	1 cut(s)	727
PciI	ACATGT	1 cut(s)	796
PcsI	WCGNNNNNNNCGW	1 cut(s)	1302
PctI	GAATGC	2 cut(s)	712, 1022
PdiI	GCCGGC	1 cut(s)	1468
PdmI	GAANNNNTTC	2 cut(s)	75, 1107
PfeI	GAWTC	5 cut(s)	37, 63, 76, 82, 359
PflFI	GACNNNGTC	1 cut(s)	1331
PfoI	TCCNGGA	2 cut(s)	352, 790
PinAI	ACCGGT	1 cut(s)	1412
PkrI	GCNGC	7 cut(s)	7, 303, 418, 909, 1233, 1462, 1465
Ple19I	CGATCG	1 cut(s)	1270
PleI	GAGTC	3 cut(s)	102, 140, 1004
PpsI	GAGTC	3 cut(s)	102, 140, 1004
PpuMI	RGGWCCY	1 cut(s)	1333
PscI	ACATGT	1 cut(s)	796
Psp124BI	GAGCTC	2 cut(s)	94, 1205
Psp5II	RGGWCCY	1 cut(s)	1333
Psp6I	CCWGG	7 cut(s)	352, 754, 790, 943, 1069, 1353, 1429
PspEI	GGTNACC	1 cut(s)	1062
PspFI	CCCAGC	1 cut(s)	967
PspGI	CCWGG	7 cut(s)	352, 754, 790, 943, 1069, 1353, 1429
PspN4I	GGNNCC	3 cut(s)	175, 1120, 1522
PspPI	GGNCC	1 cut(s)	1333
PspPPI	RGGWCCY	1 cut(s)	1333
PstNI	CAGNNNCTG	2 cut(s)	66, 761
PsuI	RGATCY	2 cut(s)	241, 1190
PsyI	GACNNNGTC	1 cut(s)	1331
PvuI	CGATCG	1 cut(s)	1270
RsaI	GTAC	3 cut(s)	175, 803, 1254
RsaNI	GTAC	3 cut(s)	174, 802, 1253
RseI	CAYNNNNRTG	3 cut(s)	1005, 1057, 1476
SacI	GAGCTC	2 cut(s)	94, 1205
SaqAI	TTAA	5 cut(s)	336, 405, 939, 1403, 1528
SatI	GCNGC	7 cut(s)	6, 302, 417, 908, 1232, 1461, 1464
Sau3AI	GATC	6 cut(s)	48, 241, 427, 454, 1190, 1267
Sau96I	GGNCC	1 cut(s)	1333
SchI	GAGTC	3 cut(s)	102, 141, 1004
ScrFI	CCNGG	8 cut(s)	354, 756, 792, 945, 1071, 1355, 1360, 1431
SduI	GDGCHC	4 cut(s)	94, 345, 579, 1205
SfaNI	GCATC	8 cut(s)	238, 487, 649, 678, 1138, 1309, 1480, 1486
Sfr274I	CTCGAG	1 cut(s)	1304
SinI	GGWCC	1 cut(s)	1333
SlaI	CTCGAG	1 cut(s)	1304
SmiMI	CAYNNNNRTG	3 cut(s)	1005, 1057, 1476
SmlI	CTYRAG	1 cut(s)	1304
SmoI	CTYRAG	1 cut(s)	1304
Sse9I	AATT	3 cut(s)	540, 604, 1171
SseBI	AGGCCT	1 cut(s)	727
SsiI	CCGC	6 cut(s)	6, 31, 419, 1231, 1250, 1461
SspMI	CTAG	2 cut(s)	915, 1046
SstI	GAGCTC	2 cut(s)	94, 1205
StuI	AGGCCT	1 cut(s)	727
StyD4I	CCNGG	8 cut(s)	352, 754, 790, 943, 1069, 1353, 1358, 1429
StyI	CCWWGG	1 cut(s)	1471
TaaI	ACNGT	1 cut(s)	1239
TaiI	ACGT	3 cut(s)	154, 558, 1266
TaqI	TCGA	6 cut(s)	51, 258, 589, 1266, 1305, 1443
TasI	AATT	3 cut(s)	540, 604, 1171
TauI	GCSGC	3 cut(s)	8, 1234, 1463
TfiI	GAWTC	5 cut(s)	37, 63, 76, 82, 359
Tru1I	TTAA	5 cut(s)	336, 405, 939, 1403, 1528
Tru9I	TTAA	5 cut(s)	336, 405, 939, 1403, 1528
TseFI	GTSAC	3 cut(s)	251, 1062, 1325
TseI	GCWGC	4 cut(s)	301, 416, 907, 1463
Tsp45I	GTSAC	3 cut(s)	251, 1062, 1325
TspDTI	ATGAA	4 cut(s)	41, 690, 899, 1197
TspGWI	ACGGA	1 cut(s)	1183
Tth111I	GACNNNGTC	1 cut(s)	1331
VpaK11BI	GGWCC	1 cut(s)	1333
XapI	RAATTY	1 cut(s)	1171
XbaI	TCTAGA	1 cut(s)	1045
XceI	RCATGY	2 cut(s)	506, 800
XcmI	CCANNNNNNNNNTGG	1 cut(s)	121
XhoI	CTCGAG	1 cut(s)	1304
XmiI	GTMKAC	4 cut(s)	144, 558, 878, 1350
XmnI	GAANNNNTTC	2 cut(s)	75, 1107
XspI	CTAG	2 cut(s)	915, 1046
ZraI	GACGTC	1 cut(s)	1264

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.