Rroxscaffold_3G00225350

Sister chromatid cohesion 1 protein 1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Reverse (-)
8619370 .. 8625677
6308 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00225350.1

Sequence Viewer

Length: 1944 bp
ATGAATATGCACCCATTTAAGGCAACAAAGAAGTTCCAAGCTCTTGAAGAACGTGGCCATCTCATACTATGCAATGTTCCCCAATCTGGACGAGTTACTTTTCGTTGGTCAGTGCTTCCATGTCTGAGCGAAGAGATTCTGAATCCAAGAGCTCCTATGGCTCTCCGGCTCTCCAGTATTCTCATGGGTGGAGTCGTCATCGTCTACGAACGTAAAGTGAAGCTCCTATTCGATGATGTGCACCGTCTTCTGGATGAATTAAACGAAGCATGGAAGAAGGTGAAATCCAACACAGACTCCACTATCCTACCCAAACGGAGAGCTCAGGCCAAGAAAGAAGCAATAACTCTGCCTGAGGCTGAGCACCAAGATACTGATCTTGTTGGTGACATCGAGCAGTCTCTTGATTTCTCTCACCATGCCACTCTTTTCCAGCAGCAAACCGGCTATTTTCTCATGCAACTGGATAGCGTAGATGTGGGAGAAATACTTGACGATAATGCAGTGGAGGGAGATCAACATCAGAACTTACATCAAGCTGATCCTGAGGATATCACATTGCCTAAATGTTATGATCCATCAGATGCACATGCAGATTTGTTCAACCCTCGCTTTGAGAGATTTGAAATTGAGGGAGATAACTTAGACCTCACATCAGGAGAGCCCGCACATATTCGACCACCTTCTCCAAATTATCTAATACCTTCTCCACCTCGTCAAGACCAGCATCAGGAAGGACAGCAGGCTAATAATGTGTTTGATGAAGTGGTGCAGATGCAAGATGTTCAAGAGAATGCTCAACAGAGGCAGAGGCCTATAAGGAGGAAAAAGAGAAAAACACCAGCCTCTGTAATGGATAATGACCTAACAATCCATCCTGCTCATGTGTACCAATCTTGGCTTCAAGATACTTCAGATATAGTTTCAAGAAGACGAAGAAACCAAAAGCCCAAGAACATAATGTCTACTATGAAGATTGGTAAACTCATGGAGCAGCCAGCTAGTGTTCTCATGGGTCGTTTATTTAAACCCGGAAGTGGAGAAACATATTATCCAACTCCTCTCTTAGAGCTATTCAAGGAAAAACATACCCATGACTCACCTTCAGCATTCACCTCGCCACCTCTGCCTCCAGAACCATCATCATGGTCACCACCTGAAAGACAAACTTATCAAGACCCGCCTTTTGAAGATTTTCTTAGTGGAGGTGGCTCCCAGTCATTTGTAACCCCCACAGAACAGATACGGACAAATTTAGTTAACAATGACATAACACTACAACCTGAACTCATGGATGAACTGAAAGCCAATCTTAATGGCATGAAAGGAGCTGATACCAACCCGGCAACACCAAGAAATTCTGGAGATGAGAGAAGATCCATCCTGAGCTCCTCATCTGGAAAGGGAGTTAACAGAAACAGTTCAGAAGTCAATTCTGGACGATCCAACAGGAAGAGGCGTTATTCATCTATACATAGCAATGATGGACTTGAACCAGTATTAGAGGATAATGGATGTCAGCATTCTGATCCAAACTTCAACGTAATAAGGTTATCTGGAAATGGCCCTACACCTGAGCATGAATTATTGATGGAAACTGGACCGACACCGACACAACAACCTATCATCAATCAACCACTGGAAAAAGTGACTGATGCCATTCGAATGGAACTGAAATCCCATTTTGAAATACCAGGTGGCCCTCAAGTAGAATCCCTGAACAAACTGACTGCTGGAATGAATCGAAGAGGAGCGGCTATGCTTTTCTATCAAACTTGTGGTAGGAATCCATACTATCTTTCCCTTCCTGCTTATGTTATGCGCTTGTTCTTACGAACTGCTTGTGTTCTGTCATCTGCAGTTCTTGCAACTCGTGATTTCGTAAAAGTTAAACAAAATCCCCCTTATGAGGATATTCTCATTACTCGAGGACCAAATATGTGA

Protein Analysis

647

Amino Acids

72.97

Weight (kDa)

6.06

Isoelectric Point (pI)

56.01

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rad21_Rec8_N PF04825 43 - 105 6.4e-14 N terminus of Rad21 / Rec8 like protein
Rad21_Rec8 PF04824 621 - 647 1.4e-07 Conserved region of Rad21 / Rec8 like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Orthologous Genes (Group: OG0000542)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G05490 AT5G05490
fragaria_vesca FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica MD12G1179600.v1.1
prunus_persica Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis pycom12g16940
rosa_chinensis RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccBSI CCGCTC 1 cut(s) 1754
AccI GTMKAC 2 cut(s) 204, 965
AciI CCGC 3 cut(s) 666, 1181, 1754
AclWI GGATC 5 cut(s) 536, 569, 1371, 1437, 1523
AcoI YGGCCR 1 cut(s) 55
AcsI RAATTY 2 cut(s) 1252, 1357
AcuI CTGAAG 2 cut(s) 897, 1089
AfaI GTAC 1 cut(s) 890
AfiI CCNNNNNNNGG 6 cut(s) 19, 86, 250, 730, 1037, 1909
AjnI CCWGG 1 cut(s) 1693
AjuI GAANNNNNNNTTGG 2 cut(s) 885, 917
AluBI AGCT 9 cut(s) 41, 152, 223, 323, 539, 1001, 1072, 1331, 1389
AluI AGCT 9 cut(s) 41, 152, 223, 323, 539, 1001, 1072, 1331, 1389
Alw21I GWGCWC 5 cut(s) 154, 243, 325, 366, 1391
Alw26I GTCTC 1 cut(s) 405
Alw44I GTGCAC 1 cut(s) 239
AlwI GGATC 5 cut(s) 536, 569, 1371, 1437, 1523
AlwNI CAGNNNCTG 1 cut(s) 848
Ama87I CYCGRG 1 cut(s) 1926
AoxI GGCC 5 cut(s) 55, 327, 812, 1564, 1699
ApaLI GTGCAC 1 cut(s) 239
ApeKI GCWGC 2 cut(s) 436, 994
ApoI RAATTY 2 cut(s) 1252, 1357
ArsI GACNNNNNNTTYG 2 cut(s) 1169, 1201
Asp700I GAANNNNTTC 3 cut(s) 135, 1194, 1420
AspLEI GCGC 1 cut(s) 1824
AspS9I GGNCC 4 cut(s) 1565, 1601, 1700, 1931
AsuC2I CCSGG 2 cut(s) 1032, 1343
AsuHPI GGTGA 6 cut(s) 292, 398, 407, 1092, 1105, 1143
AsuII TTCGAA 1 cut(s) 1663
AvaI CYCGRG 1 cut(s) 1926
AvaII GGWCC 2 cut(s) 1601, 1931
AxyI CCTNAGG 2 cut(s) 354, 546
BaeGI GKGCMC 1 cut(s) 243
BalI TGGCCA 1 cut(s) 57
BanII GRGCYC 4 cut(s) 154, 325, 666, 1391
BauI CACGAG 1 cut(s) 1872
BbsI GAAGAC 2 cut(s) 239, 937
Bbv12I GWGCWC 5 cut(s) 154, 243, 325, 366, 1391
BbvI GCAGC 2 cut(s) 448, 1006
BccI CCATC 7 cut(s) 66, 586, 882, 1147, 1388, 1478, 1585
BcgI CGANNNNNNTGC 2 cut(s) 1098, 1132
BciT130I CCWGG 1 cut(s) 1695
BcnI CCSGG 2 cut(s) 1032, 1343
BcoDI GTCTC 1 cut(s) 405
BfaI CTAG 1 cut(s) 1002
BfmI CTRYAG 1 cut(s) 1857
BisI GCNGC 3 cut(s) 437, 995, 1755
BlpI GCTNAGC 1 cut(s) 360
BlsI GCNGC 3 cut(s) 438, 996, 1756
Bme1390I CCNGG 3 cut(s) 1032, 1343, 1695
Bme18I GGWCC 2 cut(s) 1601, 1931
BmeT110I CYCGRG 1 cut(s) 1926
BmgT120I GGNCC 4 cut(s) 1565, 1601, 1700, 1931
BmiI GGNNCC 1 cut(s) 1213
BmrFI CCNGG 3 cut(s) 1032, 1343, 1695
BmrI ACTGGG 1 cut(s) 1210
BmsI GCATC 4 cut(s) 574, 736, 765, 1645
BmuI ACTGGG 1 cut(s) 1210
BpiI GAAGAC 2 cut(s) 239, 937
BpmI CTGGAG 3 cut(s) 157, 1116, 1383
Bpu10I CCTNAGC 3 cut(s) 324, 1385, 1575
Bpu1102I GCTNAGC 1 cut(s) 360
Bpu14I TTCGAA 1 cut(s) 1663
BpuEI CTTGAG 1 cut(s) 1689
BpuMI CCSGG 2 cut(s) 1032, 1343
BsaBI GATNNNNATC 2 cut(s) 375, 519
BsaXI ACNNNNNCTCC 2 cut(s) 281, 311
Bsc4I CCNNNNNNNGG 6 cut(s) 19, 86, 250, 730, 1037, 1909
Bse118I RCCGGY 1 cut(s) 443
Bse1I ACTGG 6 cut(s) 174, 468, 1216, 1496, 1603, 1644
Bse21I CCTNAGG 2 cut(s) 354, 546
Bse3DI GCAATG 3 cut(s) 79, 557, 1486
Bse8I GATNNNNATC 2 cut(s) 375, 519
BseBI CCWGG 1 cut(s) 1695
BseGI GGATG 5 cut(s) 259, 874, 1300, 1380, 1520
BseJI GATNNNNATC 2 cut(s) 375, 519
BseLI CCNNNNNNNGG 6 cut(s) 19, 86, 250, 730, 1037, 1909
BseMI GCAATG 3 cut(s) 79, 557, 1486
BseMII CTCAG 7 cut(s) 116, 338, 345, 351, 537, 1376, 1566
BseNI ACTGG 6 cut(s) 174, 468, 1216, 1496, 1603, 1644
BseRI GAGGAG 3 cut(s) 1050, 1381, 1764
BseSI GKGCMC 1 cut(s) 243
BseXI GCAGC 2 cut(s) 448, 1006
BsgI GTGCAG 1 cut(s) 791
BshFI GGCC 5 cut(s) 57, 329, 814, 1566, 1701
BsiHKAI GWGCWC 5 cut(s) 154, 243, 325, 366, 1391
BsiHKCI CYCGRG 1 cut(s) 1926
BsiSI CCGG 4 cut(s) 166, 444, 1032, 1343
BslI CCNNNNNNNGG 6 cut(s) 19, 86, 250, 730, 1037, 1909
BsmAI GTCTC 1 cut(s) 405
BsmI GAATGC 3 cut(s) 799, 1109, 1522
BsnI GGCC 5 cut(s) 57, 329, 814, 1566, 1701
BsoBI CYCGRG 1 cut(s) 1926
Bsp119I TTCGAA 1 cut(s) 1663
Bsp1286I GDGCHC 6 cut(s) 154, 243, 325, 366, 666, 1391
Bsp143I GATC 7 cut(s) 376, 514, 541, 574, 1376, 1442, 1528
Bsp1720I GCTNAGC 1 cut(s) 360
BspACI CCGC 3 cut(s) 666, 1181, 1754
BspANI GGCC 5 cut(s) 57, 329, 814, 1566, 1701
BspCNI CTCAG 7 cut(s) 117, 337, 346, 352, 538, 1377, 1567
BspLI GGNNCC 1 cut(s) 1213
BspMAI CTGCAG 1 cut(s) 1861
BspPI GGATC 5 cut(s) 536, 569, 1371, 1437, 1523
BspT104I TTCGAA 1 cut(s) 1663
BsrBI CCGCTC 1 cut(s) 1754
BsrDI GCAATG 3 cut(s) 79, 557, 1486
BsrFI RCCGGY 1 cut(s) 443
BsrI ACTGG 6 cut(s) 174, 468, 1216, 1496, 1603, 1644
BssAI RCCGGY 1 cut(s) 443
BssMI GATC 7 cut(s) 376, 514, 541, 574, 1376, 1442, 1528
BssSI CACGAG 1 cut(s) 1872
Bst2BI CACGAG 1 cut(s) 1872
Bst2UI CCWGG 1 cut(s) 1695
Bst4CI ACNGT 2 cut(s) 245, 1421
Bst6I CTCTTC 3 cut(s) 126, 1448, 1741
BstAPI GCANNNNNTGC 1 cut(s) 1865
BstBI TTCGAA 1 cut(s) 1663
BstC8I GCNNGC 3 cut(s) 666, 744, 999
BstEII GGTNACC 1 cut(s) 1149
BstF5I GGATG 5 cut(s) 259, 874, 1300, 1380, 1520
BstHHI GCGC 1 cut(s) 1824
BstKTI GATC 7 cut(s) 379, 517, 544, 577, 1379, 1445, 1531
BstMAI GTCTC 1 cut(s) 405
BstMBI GATC 7 cut(s) 376, 514, 541, 574, 1376, 1442, 1528
BstMWI GCNNNNNNNGC 3 cut(s) 158, 1126, 1865
BstNI CCWGG 1 cut(s) 1695
BstNSI RCATGY 1 cut(s) 593
BstPI GGTNACC 1 cut(s) 1149
BstSCI CCNGG 3 cut(s) 1030, 1341, 1693
BstSFI CTRYAG 1 cut(s) 1857
BstSLI GKGCMC 1 cut(s) 243
BstV1I GCAGC 2 cut(s) 448, 1006
BstV2I GAAGAC 2 cut(s) 239, 937
BstX2I RGATCY 1 cut(s) 1376
BstXI CCANNNNNNTGG 2 cut(s) 1146, 1666
BstYI RGATCY 1 cut(s) 1376
Bsu36I CCTNAGG 2 cut(s) 354, 546
BsuRI GGCC 5 cut(s) 57, 329, 814, 1566, 1701
BtsCI GGATG 5 cut(s) 259, 874, 1300, 1380, 1520
BtsI GCAGTG 1 cut(s) 510
BtsIMutI CAGTG 3 cut(s) 117, 510, 1637
Cac8I GCNNGC 3 cut(s) 666, 744, 999
CaiI CAGNNNCTG 1 cut(s) 848
CfoI GCGC 1 cut(s) 1824
Cfr10I RCCGGY 1 cut(s) 443
Cfr13I GGNCC 4 cut(s) 1565, 1601, 1700, 1931
CsiI ACCWGGT 1 cut(s) 1693
Csp6I GTAC 1 cut(s) 889
CviQI GTAC 1 cut(s) 889
DpnI GATC 7 cut(s) 378, 516, 543, 576, 1378, 1444, 1530
DpnII GATC 7 cut(s) 376, 514, 541, 574, 1376, 1442, 1528
DraI TTTAAA 1 cut(s) 1027
EaeI YGGCCR 1 cut(s) 55
Eam1104I CTCTTC 3 cut(s) 126, 1448, 1741
EarI CTCTTC 3 cut(s) 126, 1448, 1741
Ecl136II GAGCTC 3 cut(s) 152, 323, 1389
Eco147I AGGCCT 1 cut(s) 814
Eco24I GRGCYC 4 cut(s) 154, 325, 666, 1391
Eco32I GATATC 1 cut(s) 553
Eco47I GGWCC 2 cut(s) 1601, 1931
Eco53kI GAGCTC 3 cut(s) 152, 323, 1389
Eco57I CTGAAG 2 cut(s) 897, 1089
Eco81I CCTNAGG 2 cut(s) 354, 546
Eco88I CYCGRG 1 cut(s) 1926
Eco91I GGTNACC 1 cut(s) 1149
EcoICRI GAGCTC 3 cut(s) 152, 323, 1389
EcoO65I GGTNACC 1 cut(s) 1149
EcoRII CCWGG 1 cut(s) 1693
EcoRV GATATC 1 cut(s) 553
EcoT38I GRGCYC 4 cut(s) 154, 325, 666, 1391
FalI AAGNNNNNCTT 6 cut(s) 1153, 1185, 1182, 1214, 1296, 1328
FauI CCCGC 2 cut(s) 673, 1188
FblI GTMKAC 2 cut(s) 204, 965
Fnu4HI GCNGC 3 cut(s) 437, 995, 1755
FokI GGATG 5 cut(s) 266, 861, 1307, 1367, 1527
FriOI GRGCYC 4 cut(s) 154, 325, 666, 1391
Fsp4HI GCNGC 3 cut(s) 437, 995, 1755
FspBI CTAG 1 cut(s) 1002
GlaI GCGC 1 cut(s) 1823
GluI GCNGC 3 cut(s) 437, 995, 1755
GsuI CTGGAG 3 cut(s) 157, 1116, 1383
HaeIII GGCC 5 cut(s) 57, 329, 814, 1566, 1701
HapII CCGG 4 cut(s) 166, 444, 1032, 1343
HhaI GCGC 1 cut(s) 1824
Hin6I GCGC 1 cut(s) 1822
HinP1I GCGC 1 cut(s) 1822
HincII GTYRAC 2 cut(s) 1261, 1411
HindII GTYRAC 2 cut(s) 1261, 1411
HinfI GANTC 8 cut(s) 136, 142, 192, 296, 1097, 1712, 1741, 1786
HpaI GTTAAC 2 cut(s) 1261, 1411
HpaII CCGG 4 cut(s) 166, 444, 1032, 1343
HphI GGTGA 6 cut(s) 292, 398, 407, 1092, 1105, 1143
Hpy166II GTNNAC 7 cut(s) 205, 241, 889, 966, 983, 1261, 1411
Hpy188I TCNGA 7 cut(s) 126, 141, 525, 583, 916, 1426, 1528
Hpy8I GTNNAC 7 cut(s) 205, 241, 889, 966, 983, 1261, 1411
HpyAV CCTTC 6 cut(s) 271, 693, 714, 728, 1113, 1814
HpyCH4III ACNGT 2 cut(s) 245, 1421
HpyCH4IV ACGT 3 cut(s) 52, 211, 1542
HpyF10VI GCNNNNNNNGC 3 cut(s) 158, 1126, 1865
HpySE526I ACGT 3 cut(s) 52, 211, 1542
HspAI GCGC 1 cut(s) 1822
KspAI GTTAAC 2 cut(s) 1261, 1411
Kzo9I GATC 7 cut(s) 376, 514, 541, 574, 1376, 1442, 1528
LmnI GCTCC 7 cut(s) 157, 228, 991, 1217, 1328, 1394, 1751
Lsp1109I GCAGC 2 cut(s) 448, 1006
LweI GCATC 4 cut(s) 574, 736, 765, 1645
MabI ACCWGGT 1 cut(s) 1693
MaeI CTAG 1 cut(s) 1002
MaeII ACGT 3 cut(s) 52, 211, 1542
MaeIII GTNAC 5 cut(s) 94, 386, 1149, 1225, 1648
MalI GATC 7 cut(s) 378, 516, 543, 576, 1378, 1444, 1530
MbiI CCGCTC 1 cut(s) 1754
MboI GATC 7 cut(s) 376, 514, 541, 574, 1376, 1442, 1528
MflI RGATCY 1 cut(s) 1376
MhlI GDGCHC 6 cut(s) 154, 243, 325, 366, 666, 1391
MlsI TGGCCA 1 cut(s) 57
MluCI AATT 7 cut(s) 257, 627, 691, 1252, 1357, 1432, 1583
MluNI TGGCCA 1 cut(s) 57
MlyI GAGTC 3 cut(s) 201, 290, 1091
MmeI TCCRAC 3 cut(s) 312, 1079, 1470
Mox20I TGGCCA 1 cut(s) 57
MroXI GAANNNNTTC 3 cut(s) 135, 1194, 1420
MscI TGGCCA 1 cut(s) 57
MseI TTAA 7 cut(s) 18, 260, 1026, 1260, 1314, 1410, 1890
MslI CAYNNNNRTG 4 cut(s) 1092, 1144, 1479, 1664
Msp20I TGGCCA 1 cut(s) 57
MspI CCGG 4 cut(s) 166, 444, 1032, 1343
MspR9I CCNGG 3 cut(s) 1032, 1343, 1695
Mva1269I GAATGC 3 cut(s) 799, 1109, 1522
MvaI CCWGG 1 cut(s) 1695
MwoI GCNNNNNNNGC 3 cut(s) 158, 1126, 1865
NciI CCSGG 2 cut(s) 1032, 1343
NdeII GATC 7 cut(s) 376, 514, 541, 574, 1376, 1442, 1528
NlaIV GGNNCC 1 cut(s) 1213
NmuCI GTSAC 3 cut(s) 386, 1149, 1648
NspI RCATGY 1 cut(s) 593
NspV TTCGAA 1 cut(s) 1663
PaeR7I CTCGAG 1 cut(s) 1926
PceI AGGCCT 1 cut(s) 814
PctI GAATGC 3 cut(s) 799, 1109, 1522
PdmI GAANNNNTTC 3 cut(s) 135, 1194, 1420
PfeI GAWTC 5 cut(s) 136, 142, 1712, 1741, 1786
PkrI GCNGC 3 cut(s) 438, 996, 1756
PleI GAGTC 3 cut(s) 200, 290, 1091
PpsI GAGTC 3 cut(s) 200, 290, 1091
Psp124BI GAGCTC 3 cut(s) 154, 325, 1391
Psp6I CCWGG 1 cut(s) 1693
PspEI GGTNACC 1 cut(s) 1149
PspGI CCWGG 1 cut(s) 1693
PspN4I GGNNCC 1 cut(s) 1213
PspPI GGNCC 4 cut(s) 1565, 1601, 1700, 1931
PspXI VCTCGAGB 1 cut(s) 1926
PstI CTGCAG 1 cut(s) 1861
PstNI CAGNNNCTG 1 cut(s) 848
PsuI RGATCY 1 cut(s) 1376
RsaI GTAC 1 cut(s) 890
RsaNI GTAC 1 cut(s) 889
RseI CAYNNNNRTG 4 cut(s) 1092, 1144, 1479, 1664
SacI GAGCTC 3 cut(s) 154, 325, 1391
SaqAI TTAA 7 cut(s) 18, 260, 1026, 1260, 1314, 1410, 1890
SatI GCNGC 3 cut(s) 437, 995, 1755
Sau3AI GATC 7 cut(s) 376, 514, 541, 574, 1376, 1442, 1528
Sau96I GGNCC 4 cut(s) 1565, 1601, 1700, 1931
SchI GAGTC 3 cut(s) 201, 290, 1091
ScrFI CCNGG 3 cut(s) 1032, 1343, 1695
SduI GDGCHC 6 cut(s) 154, 243, 325, 366, 666, 1391
SexAI ACCWGGT 1 cut(s) 1693
SfaNI GCATC 4 cut(s) 574, 736, 765, 1645
SfcI CTRYAG 1 cut(s) 1857
Sfr274I CTCGAG 1 cut(s) 1926
SfuI TTCGAA 1 cut(s) 1663
SinI GGWCC 2 cut(s) 1601, 1931
SlaI CTCGAG 1 cut(s) 1926
SmiMI CAYNNNNRTG 4 cut(s) 1092, 1144, 1479, 1664
SmlI CTYRAG 2 cut(s) 1704, 1926
SmoI CTYRAG 2 cut(s) 1704, 1926
Sse9I AATT 7 cut(s) 257, 627, 691, 1252, 1357, 1432, 1583
SseBI AGGCCT 1 cut(s) 814
SsiI CCGC 3 cut(s) 666, 1181, 1754
SspMI CTAG 1 cut(s) 1002
SstI GAGCTC 3 cut(s) 154, 325, 1391
StuI AGGCCT 1 cut(s) 814
StyD4I CCNGG 3 cut(s) 1030, 1341, 1693
TaaI ACNGT 2 cut(s) 245, 1421
TaiI ACGT 3 cut(s) 55, 214, 1545
TaqI TCGA 6 cut(s) 231, 393, 676, 1663, 1744, 1927
TaqII GACCGA 1 cut(s) 1618
TasI AATT 7 cut(s) 257, 627, 691, 1252, 1357, 1432, 1583
TauI GCSGC 1 cut(s) 1757
TfiI GAWTC 5 cut(s) 136, 142, 1712, 1741, 1786
Tru1I TTAA 7 cut(s) 18, 260, 1026, 1260, 1314, 1410, 1890
Tru9I TTAA 7 cut(s) 18, 260, 1026, 1260, 1314, 1410, 1890
TscAI CASTG 3 cut(s) 117, 510, 1644
TseFI GTSAC 3 cut(s) 386, 1149, 1648
TseI GCWGC 2 cut(s) 436, 994
Tsp45I GTSAC 3 cut(s) 386, 1149, 1648
TspDTI ATGAA 9 cut(s) 17, 270, 777, 986, 1311, 1337, 1455, 1596, 1754
TspGWI ACGGA 2 cut(s) 331, 1261
TspRI CASTG 3 cut(s) 117, 510, 1644
VneI GTGCAC 1 cut(s) 239
VpaK11BI GGWCC 2 cut(s) 1601, 1931
XapI RAATTY 2 cut(s) 1252, 1357
XceI RCATGY 1 cut(s) 593
XcmI CCANNNNNNNNNTGG 1 cut(s) 181
XhoI CTCGAG 1 cut(s) 1926
XmiI GTMKAC 2 cut(s) 204, 965
XmnI GAANNNNTTC 3 cut(s) 135, 1194, 1420
XspI CTAG 1 cut(s) 1002
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.