Sister chromatid cohesion 1 protein 1-like
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| Rad21_Rec8 | PF04824 | 499 - 551 | 3.3e-19 | Conserved region of Rad21 / Rec8 like protein |
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AasI | GACNNNNNNGTC | 1 cut(s) | 203 |
| Acc36I | ACCTGC | 1 cut(s) | 1089 |
| AccBSI | CCGCTC | 1 cut(s) | 1547 |
| AccI | GTMKAC | 3 cut(s) | 96, 546, 866 |
| AciI | CCGC | 4 cut(s) | 337, 407, 1487, 1547 |
| AclWI | GGATC | 5 cut(s) | 437, 470, 1173, 1316, 1651 |
| AcsI | RAATTY | 1 cut(s) | 1159 |
| AcuI | CTGAAG | 1 cut(s) | 798 |
| AfaI | GTAC | 1 cut(s) | 791 |
| AfiI | CCNNNNNNNGG | 5 cut(s) | 130, 631, 938, 1200, 1621 |
| AflIII | ACRYGT | 1 cut(s) | 784 |
| AjnI | CCWGG | 4 cut(s) | 742, 778, 931, 1057 |
| AjuI | GAANNNNNNNTTGG | 2 cut(s) | 786, 818 |
| AluBI | AGCT | 7 cut(s) | 224, 440, 902, 959, 973, 1133, 1191 |
| AluI | AGCT | 7 cut(s) | 224, 440, 902, 959, 973, 1133, 1191 |
| Alw21I | GWGCWC | 2 cut(s) | 226, 1193 |
| Alw26I | GTCTC | 1 cut(s) | 306 |
| AlwI | GGATC | 5 cut(s) | 437, 470, 1173, 1316, 1651 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 260, 749, 1432 |
| AoxI | GGCC | 6 cut(s) | 20, 43, 228, 713, 1357, 1492 |
| ApeKI | GCWGC | 2 cut(s) | 404, 895 |
| ApoI | RAATTY | 1 cut(s) | 1159 |
| AseI | ATTAAT | 1 cut(s) | 1382 |
| Asp700I | GAANNNNTTC | 1 cut(s) | 1095 |
| AspS9I | GGNCC | 4 cut(s) | 21, 1358, 1394, 1493 |
| AsuHPI | GGTGA | 6 cut(s) | 193, 299, 308, 993, 1006, 1044 |
| AsuII | TTCGAA | 1 cut(s) | 1456 |
| AvaII | GGWCC | 1 cut(s) | 1394 |
| AxyI | CCTNAGG | 1 cut(s) | 447 |
| BaeI | ACNNNNGTAYC | 2 cut(s) | 773, 806 |
| BanII | GRGCYC | 3 cut(s) | 226, 567, 1193 |
| BauI | CACGAG | 1 cut(s) | 1584 |
| BbsI | GAAGAC | 1 cut(s) | 1069 |
| Bbv12I | GWGCWC | 2 cut(s) | 226, 1193 |
| BbvI | GCAGC | 2 cut(s) | 416, 907 |
| BccI | CCATC | 3 cut(s) | 487, 783, 1048 |
| BcgI | CGANNNNNNTGC | 2 cut(s) | 999, 1033 |
| BciT130I | CCWGG | 4 cut(s) | 744, 780, 933, 1059 |
| BcoDI | GTCTC | 1 cut(s) | 306 |
| BfaI | CTAG | 3 cut(s) | 903, 1034, 1638 |
| BfuAI | ACCTGC | 1 cut(s) | 1089 |
| BglI | GCCNNNNNGGC | 1 cut(s) | 1145 |
| BglII | AGATCT | 1 cut(s) | 277 |
| BisI | GCNGC | 4 cut(s) | 338, 405, 896, 1548 |
| BlpI | GCTNAGC | 1 cut(s) | 261 |
| BlsI | GCNGC | 4 cut(s) | 339, 406, 897, 1549 |
| Bme1390I | CCNGG | 4 cut(s) | 744, 780, 933, 1059 |
| Bme18I | GGWCC | 1 cut(s) | 1394 |
| BmgT120I | GGNCC | 4 cut(s) | 21, 1358, 1394, 1493 |
| BmiI | GGNNCC | 1 cut(s) | 1108 |
| BmrFI | CCNGG | 4 cut(s) | 744, 780, 933, 1059 |
| BmrI | ACTGGG | 1 cut(s) | 86 |
| BmsI | GCATC | 6 cut(s) | 274, 475, 637, 666, 1126, 1438 |
| BmuI | ACTGGG | 1 cut(s) | 86 |
| BpiI | GAAGAC | 1 cut(s) | 1069 |
| BpmI | CTGGAG | 1 cut(s) | 1185 |
| Bpu10I | CCTNAGC | 3 cut(s) | 225, 1187, 1368 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 261 |
| Bpu14I | TTCGAA | 1 cut(s) | 1456 |
| BpuEI | CTTGAG | 1 cut(s) | 1482 |
| BsaBI | GATNNNNATC | 2 cut(s) | 276, 1140 |
| BsaJI | CCNNGG | 1 cut(s) | 422 |
| BsaXI | ACNNNNNCTCC | 4 cut(s) | 182, 212, 528, 558 |
| Bsc4I | CCNNNNNNNGG | 5 cut(s) | 130, 631, 938, 1200, 1621 |
| Bse118I | RCCGGY | 1 cut(s) | 344 |
| Bse1I | ACTGG | 5 cut(s) | 92, 369, 1289, 1396, 1437 |
| Bse21I | CCTNAGG | 1 cut(s) | 447 |
| Bse3DI | GCAATG | 1 cut(s) | 458 |
| Bse8I | GATNNNNATC | 2 cut(s) | 276, 1140 |
| BseBI | CCWGG | 4 cut(s) | 744, 780, 933, 1059 |
| BseDI | CCNNGG | 1 cut(s) | 422 |
| BseGI | GGATG | 3 cut(s) | 160, 688, 775 |
| BseJI | GATNNNNATC | 2 cut(s) | 276, 1140 |
| BseLI | CCNNNNNNNGG | 5 cut(s) | 130, 631, 938, 1200, 1621 |
| BseMI | GCAATG | 1 cut(s) | 458 |
| BseMII | CTCAG | 5 cut(s) | 239, 252, 438, 1178, 1359 |
| BseNI | ACTGG | 5 cut(s) | 92, 369, 1289, 1396, 1437 |
| BseRI | GAGGAG | 5 cut(s) | 739, 951, 1143, 1183, 1557 |
| BseXI | GCAGC | 2 cut(s) | 416, 907 |
| BseYI | CCCAGC | 1 cut(s) | 955 |
| BsgI | GTGCAG | 1 cut(s) | 692 |
| BshFI | GGCC | 6 cut(s) | 22, 45, 230, 715, 1359, 1494 |
| BsiHKAI | GWGCWC | 2 cut(s) | 226, 1193 |
| BsiSI | CCGG | 1 cut(s) | 345 |
| BslI | CCNNNNNNNGG | 5 cut(s) | 130, 631, 938, 1200, 1621 |
| BsmAI | GTCTC | 1 cut(s) | 306 |
| BsmI | GAATGC | 2 cut(s) | 700, 1010 |
| BsnI | GGCC | 6 cut(s) | 22, 45, 230, 715, 1359, 1494 |
| Bsp119I | TTCGAA | 1 cut(s) | 1456 |
| Bsp1286I | GDGCHC | 3 cut(s) | 226, 567, 1193 |
| Bsp143I | GATC | 7 cut(s) | 277, 415, 442, 475, 1178, 1321, 1643 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 261 |
| BspACI | CCGC | 4 cut(s) | 337, 407, 1487, 1547 |
| BspANI | GGCC | 6 cut(s) | 22, 45, 230, 715, 1359, 1494 |
| BspCNI | CTCAG | 5 cut(s) | 238, 253, 439, 1179, 1360 |
| BspLI | GGNNCC | 1 cut(s) | 1108 |
| BspMI | ACCTGC | 1 cut(s) | 1089 |
| BspPI | GGATC | 5 cut(s) | 437, 470, 1173, 1316, 1651 |
| BspT104I | TTCGAA | 1 cut(s) | 1456 |
| BsrBI | CCGCTC | 1 cut(s) | 1547 |
| BsrDI | GCAATG | 1 cut(s) | 458 |
| BsrFI | RCCGGY | 1 cut(s) | 344 |
| BsrI | ACTGG | 5 cut(s) | 92, 369, 1289, 1396, 1437 |
| BssAI | RCCGGY | 1 cut(s) | 344 |
| BssECI | CCNNGG | 1 cut(s) | 422 |
| BssMI | GATC | 7 cut(s) | 277, 415, 442, 475, 1178, 1321, 1643 |
| BssSI | CACGAG | 1 cut(s) | 1584 |
| Bst2BI | CACGAG | 1 cut(s) | 1584 |
| Bst2UI | CCWGG | 4 cut(s) | 744, 780, 933, 1059 |
| Bst4CI | ACNGT | 3 cut(s) | 148, 205, 1223 |
| Bst6I | CTCTTC | 1 cut(s) | 1534 |
| BstBI | TTCGAA | 1 cut(s) | 1456 |
| BstC8I | GCNNGC | 2 cut(s) | 645, 900 |
| BstDEI | CTNAG | 7 cut(s) | 225, 261, 447, 967, 1100, 1187, 1368 |
| BstEII | GGTNACC | 1 cut(s) | 1050 |
| BstENI | CCTNNNNNAGG | 1 cut(s) | 128 |
| BstF5I | GGATG | 3 cut(s) | 160, 688, 775 |
| BstKTI | GATC | 7 cut(s) | 280, 418, 445, 478, 1181, 1324, 1646 |
| BstMAI | GTCTC | 1 cut(s) | 306 |
| BstMBI | GATC | 7 cut(s) | 277, 415, 442, 475, 1178, 1321, 1643 |
| BstMWI | GCNNNNNNNGC | 3 cut(s) | 334, 1027, 1145 |
| BstNI | CCWGG | 4 cut(s) | 744, 780, 933, 1059 |
| BstNSI | RCATGY | 1 cut(s) | 788 |
| BstPI | GGTNACC | 1 cut(s) | 1050 |
| BstSCI | CCNGG | 4 cut(s) | 742, 778, 931, 1057 |
| BstV1I | GCAGC | 2 cut(s) | 416, 907 |
| BstV2I | GAAGAC | 1 cut(s) | 1069 |
| BstX2I | RGATCY | 2 cut(s) | 277, 1178 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 1047 |
| BstYI | RGATCY | 2 cut(s) | 277, 1178 |
| Bsu36I | CCTNAGG | 1 cut(s) | 447 |
| BsuRI | GGCC | 6 cut(s) | 22, 45, 230, 715, 1359, 1494 |
| BtsCI | GGATG | 3 cut(s) | 160, 688, 775 |
| BtsIMutI | CAGTG | 3 cut(s) | 201, 1296, 1430 |
| BveI | ACCTGC | 1 cut(s) | 1089 |
| Cac8I | GCNNGC | 2 cut(s) | 645, 900 |
| CaiI | CAGNNNCTG | 3 cut(s) | 260, 749, 1432 |
| Cfr10I | RCCGGY | 1 cut(s) | 344 |
| Cfr13I | GGNCC | 4 cut(s) | 21, 1358, 1394, 1493 |
| Csp6I | GTAC | 1 cut(s) | 790 |
| CviQI | GTAC | 1 cut(s) | 790 |
| DdeI | CTNAG | 7 cut(s) | 225, 261, 447, 967, 1100, 1187, 1368 |
| DpnI | GATC | 7 cut(s) | 279, 417, 444, 477, 1180, 1323, 1645 |
| DpnII | GATC | 7 cut(s) | 277, 415, 442, 475, 1178, 1321, 1643 |
| DraI | TTTAAA | 1 cut(s) | 928 |
| DrdI | GACNNNNNNGTC | 1 cut(s) | 203 |
| DseDI | GACNNNNNNGTC | 1 cut(s) | 203 |
| Eam1104I | CTCTTC | 1 cut(s) | 1534 |
| EarI | CTCTTC | 1 cut(s) | 1534 |
| Ecl136II | GAGCTC | 2 cut(s) | 224, 1191 |
| Eco147I | AGGCCT | 2 cut(s) | 45, 715 |
| Eco24I | GRGCYC | 3 cut(s) | 226, 567, 1193 |
| Eco32I | GATATC | 2 cut(s) | 454, 1310 |
| Eco47I | GGWCC | 1 cut(s) | 1394 |
| Eco53kI | GAGCTC | 2 cut(s) | 224, 1191 |
| Eco57I | CTGAAG | 1 cut(s) | 798 |
| Eco81I | CCTNAGG | 1 cut(s) | 447 |
| Eco91I | GGTNACC | 1 cut(s) | 1050 |
| EcoICRI | GAGCTC | 2 cut(s) | 224, 1191 |
| EcoNI | CCTNNNNNAGG | 1 cut(s) | 128 |
| EcoO65I | GGTNACC | 1 cut(s) | 1050 |
| EcoRII | CCWGG | 4 cut(s) | 742, 778, 931, 1057 |
| EcoRV | GATATC | 2 cut(s) | 454, 1310 |
| EcoT38I | GRGCYC | 3 cut(s) | 226, 567, 1193 |
| FalI | AAGNNNNNCTT | 4 cut(s) | 1054, 1086, 1083, 1115 |
| FauI | CCCGC | 1 cut(s) | 1480 |
| FauNDI | CATATG | 1 cut(s) | 17 |
| FblI | GTMKAC | 3 cut(s) | 96, 546, 866 |
| Fnu4HI | GCNGC | 4 cut(s) | 338, 405, 896, 1548 |
| FokI | GGATG | 3 cut(s) | 167, 695, 762 |
| FriOI | GRGCYC | 3 cut(s) | 226, 567, 1193 |
| Fsp4HI | GCNGC | 4 cut(s) | 338, 405, 896, 1548 |
| FspBI | CTAG | 3 cut(s) | 903, 1034, 1638 |
| GluI | GCNGC | 4 cut(s) | 338, 405, 896, 1548 |
| GsaI | CCCAGC | 1 cut(s) | 959 |
| GsuI | CTGGAG | 1 cut(s) | 1185 |
| HaeIII | GGCC | 6 cut(s) | 22, 45, 230, 715, 1359, 1494 |
| HapII | CCGG | 1 cut(s) | 345 |
| HincII | GTYRAC | 2 cut(s) | 97, 1213 |
| HindII | GTYRAC | 2 cut(s) | 97, 1213 |
| HinfI | GANTC | 4 cut(s) | 197, 998, 1505, 1534 |
| HpaII | CCGG | 1 cut(s) | 345 |
| HphI | GGTGA | 6 cut(s) | 193, 299, 308, 993, 1006, 1044 |
| Hpy166II | GTNNAC | 6 cut(s) | 97, 547, 790, 867, 884, 1213 |
| Hpy188I | TCNGA | 7 cut(s) | 88, 426, 484, 817, 1297, 1321, 1632 |
| Hpy8I | GTNNAC | 6 cut(s) | 97, 547, 790, 867, 884, 1213 |
| Hpy99I | CGWCG | 1 cut(s) | 1280 |
| HpyAV | CCTTC | 7 cut(s) | 124, 172, 594, 615, 629, 1014, 1198 |
| HpyCH4III | ACNGT | 3 cut(s) | 148, 205, 1223 |
| HpyCH4IV | ACGT | 2 cut(s) | 28, 543 |
| HpyCH4V | TGCA | 8 cut(s) | 361, 404, 488, 494, 673, 679, 1010, 1451 |
| HpyF10VI | GCNNNNNNNGC | 3 cut(s) | 334, 1027, 1145 |
| HpyF3I | CTNAG | 7 cut(s) | 225, 261, 447, 967, 1100, 1187, 1368 |
| HpySE526I | ACGT | 2 cut(s) | 28, 543 |
| Kzo9I | GATC | 7 cut(s) | 277, 415, 442, 475, 1178, 1321, 1643 |
| LmnI | GCTCC | 6 cut(s) | 892, 964, 1106, 1130, 1196, 1544 |
| Lsp1109I | GCAGC | 2 cut(s) | 416, 907 |
| LweI | GCATC | 6 cut(s) | 274, 475, 637, 666, 1126, 1438 |
| MaeI | CTAG | 3 cut(s) | 903, 1034, 1638 |
| MaeII | ACGT | 2 cut(s) | 28, 543 |
| MaeIII | GTNAC | 3 cut(s) | 287, 1050, 1441 |
| MalI | GATC | 7 cut(s) | 279, 417, 444, 477, 1180, 1323, 1645 |
| MbiI | CCGCTC | 1 cut(s) | 1547 |
| MboI | GATC | 7 cut(s) | 277, 415, 442, 475, 1178, 1321, 1643 |
| MboII | GAAGA | 9 cut(s) | 187, 843, 846, 849, 886, 1074, 1103, 1188, 1551 |
| MflI | RGATCY | 2 cut(s) | 277, 1178 |
| MhlI | GDGCHC | 3 cut(s) | 226, 567, 1193 |
| MluCI | AATT | 6 cut(s) | 158, 528, 592, 1159, 1234, 1452 |
| MlyI | GAGTC | 2 cut(s) | 191, 992 |
| MmeI | TCCRAC | 2 cut(s) | 213, 1275 |
| MroXI | GAANNNNTTC | 1 cut(s) | 1095 |
| MseI | TTAA | 6 cut(s) | 143, 161, 393, 927, 1382, 1602 |
| MslI | CAYNNNNRTG | 2 cut(s) | 993, 1045 |
| MspA1I | CMGCKG | 2 cut(s) | 337, 407 |
| MspI | CCGG | 1 cut(s) | 345 |
| MspR9I | CCNGG | 4 cut(s) | 744, 780, 933, 1059 |
| Mva1269I | GAATGC | 2 cut(s) | 700, 1010 |
| MvaI | CCWGG | 4 cut(s) | 744, 780, 933, 1059 |
| MwoI | GCNNNNNNNGC | 3 cut(s) | 334, 1027, 1145 |
| NdeI | CATATG | 1 cut(s) | 17 |
| NdeII | GATC | 7 cut(s) | 277, 415, 442, 475, 1178, 1321, 1643 |
| NlaIV | GGNNCC | 1 cut(s) | 1108 |
| NmuCI | GTSAC | 3 cut(s) | 287, 1050, 1441 |
| NspI | RCATGY | 1 cut(s) | 788 |
| NspV | TTCGAA | 1 cut(s) | 1456 |
| PceI | AGGCCT | 2 cut(s) | 45, 715 |
| PciI | ACATGT | 1 cut(s) | 784 |
| PcsI | WCGNNNNNNNCGW | 1 cut(s) | 1249 |
| PctI | GAATGC | 2 cut(s) | 700, 1010 |
| PdmI | GAANNNNTTC | 1 cut(s) | 1095 |
| PfeI | GAWTC | 2 cut(s) | 1505, 1534 |
| PflFI | GACNNNGTC | 1 cut(s) | 92 |
| PfoI | TCCNGGA | 1 cut(s) | 778 |
| PkrI | GCNGC | 4 cut(s) | 339, 406, 897, 1549 |
| PleI | GAGTC | 2 cut(s) | 191, 992 |
| PpsI | GAGTC | 2 cut(s) | 191, 992 |
| PscI | ACATGT | 1 cut(s) | 784 |
| PshBI | ATTAAT | 1 cut(s) | 1382 |
| Psp124BI | GAGCTC | 2 cut(s) | 226, 1193 |
| Psp6I | CCWGG | 4 cut(s) | 742, 778, 931, 1057 |
| PspEI | GGTNACC | 1 cut(s) | 1050 |
| PspFI | CCCAGC | 1 cut(s) | 955 |
| PspGI | CCWGG | 4 cut(s) | 742, 778, 931, 1057 |
| PspN4I | GGNNCC | 1 cut(s) | 1108 |
| PspPI | GGNCC | 4 cut(s) | 21, 1358, 1394, 1493 |
| PstNI | CAGNNNCTG | 3 cut(s) | 260, 749, 1432 |
| PsuI | RGATCY | 2 cut(s) | 277, 1178 |
| PsyI | GACNNNGTC | 1 cut(s) | 92 |
| RsaI | GTAC | 1 cut(s) | 791 |
| RsaNI | GTAC | 1 cut(s) | 790 |
| RseI | CAYNNNNRTG | 2 cut(s) | 993, 1045 |
| SacI | GAGCTC | 2 cut(s) | 226, 1193 |
| SalI | GTCGAC | 1 cut(s) | 95 |
| SaqAI | TTAA | 6 cut(s) | 143, 161, 393, 927, 1382, 1602 |
| SatI | GCNGC | 4 cut(s) | 338, 405, 896, 1548 |
| Sau3AI | GATC | 7 cut(s) | 277, 415, 442, 475, 1178, 1321, 1643 |
| Sau96I | GGNCC | 4 cut(s) | 21, 1358, 1394, 1493 |
| SchI | GAGTC | 2 cut(s) | 191, 992 |
| ScrFI | CCNGG | 4 cut(s) | 744, 780, 933, 1059 |
| SduI | GDGCHC | 3 cut(s) | 226, 567, 1193 |
| SfaNI | GCATC | 6 cut(s) | 274, 475, 637, 666, 1126, 1438 |
| SfuI | TTCGAA | 1 cut(s) | 1456 |
| SinI | GGWCC | 1 cut(s) | 1394 |
| SmiMI | CAYNNNNRTG | 2 cut(s) | 993, 1045 |
| SmlI | CTYRAG | 1 cut(s) | 1497 |
| SmoI | CTYRAG | 1 cut(s) | 1497 |
| Sse9I | AATT | 6 cut(s) | 158, 528, 592, 1159, 1234, 1452 |
| SseBI | AGGCCT | 2 cut(s) | 45, 715 |
| SsiI | CCGC | 4 cut(s) | 337, 407, 1487, 1547 |
| SspMI | CTAG | 3 cut(s) | 903, 1034, 1638 |
| SstI | GAGCTC | 2 cut(s) | 226, 1193 |
| StuI | AGGCCT | 2 cut(s) | 45, 715 |
| StyD4I | CCNGG | 4 cut(s) | 742, 778, 931, 1057 |
| TaaI | ACNGT | 3 cut(s) | 148, 205, 1223 |
| TaiI | ACGT | 2 cut(s) | 31, 546 |
| TaqI | TCGA | 6 cut(s) | 50, 96, 294, 577, 1456, 1537 |
| TaqII | GACCGA | 1 cut(s) | 1411 |
| TasI | AATT | 6 cut(s) | 158, 528, 592, 1159, 1234, 1452 |
| TauI | GCSGC | 2 cut(s) | 340, 1550 |
| TfiI | GAWTC | 2 cut(s) | 1505, 1534 |
| Tru1I | TTAA | 6 cut(s) | 143, 161, 393, 927, 1382, 1602 |
| Tru9I | TTAA | 6 cut(s) | 143, 161, 393, 927, 1382, 1602 |
| TscAI | CASTG | 3 cut(s) | 208, 1296, 1437 |
| TseFI | GTSAC | 3 cut(s) | 287, 1050, 1441 |
| TseI | GCWGC | 2 cut(s) | 404, 895 |
| Tsp45I | GTSAC | 3 cut(s) | 287, 1050, 1441 |
| TspDTI | ATGAA | 6 cut(s) | 106, 171, 678, 887, 1185, 1248 |
| TspGWI | ACGGA | 4 cut(s) | 232, 1171, 1258, 1293 |
| TspRI | CASTG | 3 cut(s) | 208, 1296, 1437 |
| Tth111I | GACNNNGTC | 1 cut(s) | 92 |
| VpaK11BI | GGWCC | 1 cut(s) | 1394 |
| VspI | ATTAAT | 1 cut(s) | 1382 |
| XagI | CCTNNNNNAGG | 1 cut(s) | 128 |
| XapI | RAATTY | 1 cut(s) | 1159 |
| XbaI | TCTAGA | 1 cut(s) | 1033 |
| XceI | RCATGY | 1 cut(s) | 788 |
| XmiI | GTMKAC | 3 cut(s) | 96, 546, 866 |
| XmnI | GAANNNNTTC | 1 cut(s) | 1095 |
| XspI | CTAG | 3 cut(s) | 903, 1034, 1638 |