Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000003

Orthogroup ID

OG0000542

Physical Location & Seq

Genomic Coordinates Forward (+)

8307807 .. 8314444

Gene Structure 6638 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_3G00225070.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1827 bp

ATGGAAGAAGGTGAAATCCAGCAGCGACTCCACTATCCTCTACCCAAACGGAGAGCTCAGGCCAAGAAAGAAGCTATAACTCTGCCTGAGGCTGAGCAGATGGCCGCCACCATGCACGCCAAGATGAACCGCAGGAATCTCTACCAGATCGACCTCATCAGAATCTGCGAAGAGATTCTGAATCCAAGAGCTCCTATGGCTCTCCGACTCTCCAGTATTCTCATGGGTGGAGTCGTCATCGTCTACGAACGTAAAGTGAAGCTCCTATTCGATGATGTGCACCGTCTTCTGGATGAATTAAACGAAGCATGGAAGAAGGTGAAATCCAACACAGACTCCACTATCCTACCCAAACGGAGAGCTCAGGCCAAGAAAGAAGCAATAACTCTGCCTGAGGCTGAGCACCAAGATACTGATCTTGTTGGTGACATCGAGCAGTCTCTTGATTTCTCTCACCATGCCACTCTTTTCCAGCAGCAAACCGGCTATTTTCTCATGCAACTGGATAGTGTAGATGTGGGAGAACCACTTAACGATAATGCAGCGGAGGGAGATCAACCTCAGAACTTACATCAAGCTGATCCTGAGGATATCACATTGCCTAAATGTTATGATCCATCAGATGCACTTGCAGATTTGTTCAACCCTCGCTTTGAGAGCATCAGGAAGGACAGCAGGCTAATAATGTGTTTTGATGAAGTGGTGCAGATGCAGGATGTTCAAGAGAATGCTCAACAGAGGCAGAGGCCTATAAGGAGGAGAAAGAGAAAAACACCAGGCTCTGTAATGGATAATGACCAAACAATCCATCCTGGACATGTGTACCAATCTTGGCTTCAAGATACTTCAGATATAGTTTCAAGAAGAAGAAGAAACCAAAAGCCCAAGAACATAATGTCTACTATGAAGATTGGTAAACTCATGGAGCAGCCAGCTAGTGTTCTCATGGGTCGTTTATTTAAACCTGGAAGTGGAGAAACATATTACCCAGCTCCTCTCTTAGAGCTATTCAAGGAAAAACATACCCATGACTCACCTTCTGCATTCACCTCGCCACCTCTGCCTCTAGAACCATCATCATGGTCACCACCTGGAAGACAAACTTATCAAGACCTGCCTGTTGAAGATTTTCTTAGTGGAGGTGGCTCGCAGTCATTTGCAACTCCCACGGAACAGATACGGACAAATTTAGTTAACAATGACCGACAACATGAAGTGCTGGATGATCTGCGAGCCAATCTTATTGGCAAGAGAGGAGCTGATGCCAACCTGGCAACACCAAGGAATTCCGGAGATGAAAGAAGATCCGTCCTGAGCTCCTCATCTGGGAAGGGAGTTGACAAAAACATTTCAGAAGTCAATTCAGGACGTGTACTTGTGATTGGAGTACTGATGGTCACAGATCCAACAGGAAAAGGCGTTATTCATCTAAACATAGCAACGACAGACTTGAACCAGTGTCGGCCGGAGGATAATGGATATCATCACTCTGATCCAAACTTCAAGGTATCAAGGTTATCTGGAAATGGCCCAACACCTGAGCAAGAACTATTGATGGAAACTGGACCGACACAGACACAACAACCTATCATCAATCAGCCACTGGAAAAAGTGACTGATGCAATTCGAATGGAACTGAAATCCCATTTTGAAATACCGGGTGGCCCTCAAGTAGAATCCCTGAACAACCTGACTGCTGGACTGAATCGAAGAGGAGCGGCTTTGCTTTTCTATCAAACTTGTGTTCTTGCTACTCGTGATTTCGTAAAAGTTAAACAAAATGCCCCTTACGAGGATATTCTCATTACTAGAGGATCAAATATGTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0000003 GO:0000228 GO:0000280 GO:0000793 GO:0000794 GO:0000798 GO:0000819 GO:0003674 GO:0003682 GO:0005488 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005694 GO:0006139 GO:0006259 GO:0006281 GO:0006302 GO:0006323 GO:0006725 GO:0006807 GO:0006950 GO:0006974 GO:0006996 GO:0007049 GO:0007059 GO:0007062 GO:0007127 GO:0007135 GO:0008150 GO:0008152 GO:0008278 GO:0008608 GO:0009987 GO:0010032 GO:0016043 GO:0022402 GO:0022414 GO:0030261 GO:0031974 GO:0031981 GO:0032991 GO:0033554 GO:0034641 GO:0043170 GO:0043226 GO:0043227 GO:0043228 GO:0043229 GO:0043231 GO:0043232 GO:0043233 GO:0044237 GO:0044238 GO:0044260 GO:0044422 GO:0044424 GO:0044427 GO:0044428 GO:0044446 GO:0044454 GO:0044464 GO:0045132 GO:0045143 GO:0045144 GO:0046483 GO:0048285 GO:0050896 GO:0051177 GO:0051276 GO:0051316 GO:0051321 GO:0051455 GO:0051716 GO:0051754 GO:0061982 GO:0061983 GO:0070013 GO:0070192 GO:0070601 GO:0071103 GO:0071704 GO:0071840 GO:0090304 GO:0098813 GO:0140013 GO:1901360 GO:1903046

KEGG Pathways

Metabolic & Signaling

ko04110 ko04111 map04110 map04111

Pfam Domains

Protein Families

Rad21_Rec8 Rad21_Rec8_N

Protein Analysis

608

Amino Acids

68.41

Weight (kDa)

6.19

Isoelectric Point (pI)

52.79

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Rad21_Rec8_N	PF04825	34 - 118	3.9e-21	N terminus of Rad21 / Rec8 like protein
Rad21_Rec8	PF04824	556 - 608	3.8e-19	Conserved region of Rad21 / Rec8 like protein

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000542)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT5G05490 AT5G05490
fragaria_vesca	FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica	MD12G1179600.v1.1
prunus_persica	Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis	pycom12g16940
rosa_chinensis	RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata	RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora	Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii	Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa	Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha	Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana	Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	1122
AccBSI	CCGCTC	1 cut(s)	1718
AccI	GTMKAC	2 cut(s)	243, 899
AccIII	TCCGGA	1 cut(s)	1289
AciI	CCGC	4 cut(s)	105, 130, 545, 1718
AclWI	GGATC	6 cut(s)	575, 608, 1299, 1397, 1487, 1822
AcoI	YGGCCR	2 cut(s)	102, 1463
AcsI	RAATTY	2 cut(s)	1186, 1285
AcuI	CTGAAG	1 cut(s)	831
AfaI	GTAC	3 cut(s)	824, 1374, 1389
AfiI	CCNNNNNNNGG	4 cut(s)	289, 971, 1326, 1792
AflIII	ACRYGT	2 cut(s)	817, 1369
AgsI	TTSAA	9 cut(s)	643, 722, 839, 861, 1012, 1124, 1453, 1504, 1652
AjiI	CACGTC	1 cut(s)	1370
AjnI	CCWGG	5 cut(s)	775, 811, 964, 1090, 1269
AjuI	GAANNNNNNNTTGG	2 cut(s)	819, 851
Alw21I	GWGCWC	6 cut(s)	58, 193, 282, 364, 405, 1319
Alw26I	GTCTC	1 cut(s)	444
Alw44I	GTGCAC	1 cut(s)	278
AlwI	GGATC	6 cut(s)	575, 608, 1299, 1397, 1487, 1822
AlwNI	CAGNNNCTG	3 cut(s)	165, 782, 1603
Aor13HI	TCCGGA	1 cut(s)	1289
AoxI	GGCC	7 cut(s)	60, 102, 366, 746, 1463, 1528, 1663
ApaLI	GTGCAC	1 cut(s)	278
ApeKI	GCWGC	4 cut(s)	22, 475, 542, 928
ApoI	RAATTY	2 cut(s)	1186, 1285
Asp700I	GAANNNNTTC	2 cut(s)	174, 1128
AspS9I	GGNCC	3 cut(s)	1529, 1565, 1664
AsuC2I	CCSGG	1 cut(s)	1659
AsuHPI	GGTGA	7 cut(s)	23, 331, 437, 446, 1026, 1039, 1077
AsuII	TTCGAA	1 cut(s)	1627
AvaII	GGWCC	1 cut(s)	1565
AxyI	CCTNAGG	3 cut(s)	87, 393, 585
BaeGI	GKGCMC	1 cut(s)	282
BaeI	ACNNNNGTAYC	2 cut(s)	806, 839
BanII	GRGCYC	4 cut(s)	58, 193, 364, 1319
BauI	CACGAG	1 cut(s)	1755
BbsI	GAAGAC	2 cut(s)	278, 1102
Bbv12I	GWGCWC	6 cut(s)	58, 193, 282, 364, 405, 1319
BbvI	GCAGC	4 cut(s)	34, 487, 554, 940
BccI	CCATC	6 cut(s)	94, 625, 816, 1081, 1387, 1549
BcgI	CGANNNNNNTGC	2 cut(s)	1032, 1066
BciT130I	CCWGG	5 cut(s)	777, 813, 966, 1092, 1271
BcnI	CCSGG	1 cut(s)	1659
BcoDI	GTCTC	1 cut(s)	444
BfaI	CTAG	3 cut(s)	936, 1067, 1809
BfuAI	ACCTGC	1 cut(s)	1122
BglI	GCCNNNNNGGC	1 cut(s)	1271
BisI	GCNGC	6 cut(s)	23, 105, 476, 543, 929, 1719
BlpI	GCTNAGC	2 cut(s)	93, 399
BlsI	GCNGC	6 cut(s)	24, 106, 477, 544, 930, 1720
BmcAI	AGTACT	1 cut(s)	1389
Bme1390I	CCNGG	6 cut(s)	777, 813, 966, 1092, 1271, 1659
Bme18I	GGWCC	1 cut(s)	1565
BmgBI	CACGTC	1 cut(s)	1370
BmgT120I	GGNCC	3 cut(s)	1529, 1565, 1664
BmrFI	CCNGG	6 cut(s)	777, 813, 966, 1092, 1271, 1659
BmsI	GCATC	5 cut(s)	613, 669, 699, 1252, 1609
BpiI	GAAGAC	2 cut(s)	278, 1102
BpmI	CTGGAG	1 cut(s)	196
Bpu10I	CCTNAGC	4 cut(s)	57, 363, 1313, 1539
Bpu1102I	GCTNAGC	2 cut(s)	93, 399
Bpu14I	TTCGAA	1 cut(s)	1627
BpuEI	CTTGAG	1 cut(s)	1653
BpuMI	CCSGG	1 cut(s)	1659
BsaBI	GATNNNNATC	1 cut(s)	414
BsaJI	CCNNGG	2 cut(s)	1167, 1280
BsaWI	WCCGGW	1 cut(s)	1289
BsaXI	ACNNNNNCTCC	2 cut(s)	320, 350
Bsc4I	CCNNNNNNNGG	4 cut(s)	289, 971, 1326, 1792
Bse118I	RCCGGY	1 cut(s)	482
Bse1I	ACTGG	5 cut(s)	213, 507, 1456, 1567, 1608
Bse21I	CCTNAGG	3 cut(s)	87, 393, 585
Bse3DI	GCAATG	1 cut(s)	596
Bse8I	GATNNNNATC	1 cut(s)	414
BseAI	TCCGGA	1 cut(s)	1289
BseBI	CCWGG	5 cut(s)	777, 813, 966, 1092, 1271
BseDI	CCNNGG	2 cut(s)	1167, 1280
BseGI	GGATG	4 cut(s)	298, 721, 808, 1228
BseJI	GATNNNNATC	1 cut(s)	414
BseLI	CCNNNNNNNGG	4 cut(s)	289, 971, 1326, 1792
BseMI	GCAATG	1 cut(s)	596
BseNI	ACTGG	5 cut(s)	213, 507, 1456, 1567, 1608
BseRI	GAGGAG	5 cut(s)	772, 984, 1269, 1309, 1728
BseSI	GKGCMC	1 cut(s)	282
BseX3I	CGGCCG	1 cut(s)	1463
BseXI	GCAGC	4 cut(s)	34, 487, 554, 940
BseYI	CCCAGC	1 cut(s)	988
BsgI	GTGCAG	1 cut(s)	725
Bsh1285I	CGRYCG	1 cut(s)	1466
BshFI	GGCC	7 cut(s)	62, 104, 368, 748, 1465, 1530, 1665
BsiEI	CGRYCG	1 cut(s)	1466
BsiHKAI	GWGCWC	6 cut(s)	58, 193, 282, 364, 405, 1319
BsiSI	CCGG	4 cut(s)	483, 1290, 1466, 1658
BslI	CCNNNNNNNGG	4 cut(s)	289, 971, 1326, 1792
BsmAI	GTCTC	1 cut(s)	444
BsmI	GAATGC	2 cut(s)	733, 1043
BsnI	GGCC	7 cut(s)	62, 104, 368, 748, 1465, 1530, 1665
Bsp119I	TTCGAA	1 cut(s)	1627
Bsp1286I	GDGCHC	6 cut(s)	58, 193, 282, 364, 405, 1319
Bsp13I	TCCGGA	1 cut(s)	1289
Bsp1720I	GCTNAGC	2 cut(s)	93, 399
BspACI	CCGC	4 cut(s)	105, 130, 545, 1718
BspANI	GGCC	7 cut(s)	62, 104, 368, 748, 1465, 1530, 1665
BspEI	TCCGGA	1 cut(s)	1289
BspMI	ACCTGC	1 cut(s)	1122
BspPI	GGATC	6 cut(s)	575, 608, 1299, 1397, 1487, 1822
BspT104I	TTCGAA	1 cut(s)	1627
BsrBI	CCGCTC	1 cut(s)	1718
BsrDI	GCAATG	1 cut(s)	596
BsrFI	RCCGGY	1 cut(s)	482
BsrI	ACTGG	5 cut(s)	213, 507, 1456, 1567, 1608
BssAI	RCCGGY	1 cut(s)	482
BssECI	CCNNGG	2 cut(s)	1167, 1280
BssSI	CACGAG	1 cut(s)	1755
BssT1I	CCWWGG	1 cut(s)	1280
Bst2BI	CACGAG	1 cut(s)	1755
Bst2UI	CCWGG	5 cut(s)	777, 813, 966, 1092, 1271
Bst4CI	ACNGT	1 cut(s)	284
Bst6I	CTCTTC	2 cut(s)	165, 1705
BstBI	TTCGAA	1 cut(s)	1627
BstC8I	GCNNGC	5 cut(s)	117, 677, 933, 1148, 1233
BstDSI	CCRYGG	1 cut(s)	1167
BstEII	GGTNACC	1 cut(s)	1083
BstF5I	GGATG	4 cut(s)	298, 721, 808, 1228
BstMAI	GTCTC	1 cut(s)	444
BstMCI	CGRYCG	1 cut(s)	1466
BstMWI	GCNNNNNNNGC	4 cut(s)	197, 657, 1060, 1271
BstNI	CCWGG	5 cut(s)	777, 813, 966, 1092, 1271
BstNSI	RCATGY	1 cut(s)	821
BstPI	GGTNACC	1 cut(s)	1083
BstSCI	CCNGG	6 cut(s)	775, 811, 964, 1090, 1269, 1657
BstSLI	GKGCMC	1 cut(s)	282
BstV1I	GCAGC	4 cut(s)	34, 487, 554, 940
BstV2I	GAAGAC	2 cut(s)	278, 1102
BstX2I	RGATCY	2 cut(s)	1304, 1402
BstXI	CCANNNNNNTGG	1 cut(s)	1080
BstYI	RGATCY	2 cut(s)	1304, 1402
BstZI	CGGCCG	1 cut(s)	1463
Bsu36I	CCTNAGG	3 cut(s)	87, 393, 585
BsuRI	GGCC	7 cut(s)	62, 104, 368, 748, 1465, 1530, 1665
BtgI	CCRYGG	1 cut(s)	1167
BtrI	CACGTC	1 cut(s)	1370
BtsCI	GGATG	4 cut(s)	298, 721, 808, 1228
BtsIMutI	CAGTG	2 cut(s)	1463, 1601
BveI	ACCTGC	1 cut(s)	1122
Cac8I	GCNNGC	5 cut(s)	117, 677, 933, 1148, 1233
CaiI	CAGNNNCTG	3 cut(s)	165, 782, 1603
Cfr10I	RCCGGY	1 cut(s)	482
Cfr13I	GGNCC	3 cut(s)	1529, 1565, 1664
Csp6I	GTAC	3 cut(s)	823, 1373, 1388
CviQI	GTAC	3 cut(s)	823, 1373, 1388
DraI	TTTAAA	1 cut(s)	961
EaeI	YGGCCR	2 cut(s)	102, 1463
EagI	CGGCCG	1 cut(s)	1463
Eam1104I	CTCTTC	2 cut(s)	165, 1705
EarI	CTCTTC	2 cut(s)	165, 1705
Ecl136II	GAGCTC	4 cut(s)	56, 191, 362, 1317
EclXI	CGGCCG	1 cut(s)	1463
Eco130I	CCWWGG	1 cut(s)	1280
Eco147I	AGGCCT	1 cut(s)	748
Eco24I	GRGCYC	4 cut(s)	58, 193, 364, 1319
Eco32I	GATATC	2 cut(s)	592, 1481
Eco47I	GGWCC	1 cut(s)	1565
Eco52I	CGGCCG	1 cut(s)	1463
Eco53kI	GAGCTC	4 cut(s)	56, 191, 362, 1317
Eco57I	CTGAAG	1 cut(s)	831
Eco81I	CCTNAGG	3 cut(s)	87, 393, 585
Eco91I	GGTNACC	1 cut(s)	1083
EcoICRI	GAGCTC	4 cut(s)	56, 191, 362, 1317
EcoO65I	GGTNACC	1 cut(s)	1083
EcoRI	GAATTC	1 cut(s)	1285
EcoRII	CCWGG	5 cut(s)	775, 811, 964, 1090, 1269
EcoRV	GATATC	2 cut(s)	592, 1481
EcoT14I	CCWWGG	1 cut(s)	1280
EcoT38I	GRGCYC	4 cut(s)	58, 193, 364, 1319
ErhI	CCWWGG	1 cut(s)	1280
FalI	AAGNNNNNCTT	4 cut(s)	1087, 1119, 1116, 1148
FblI	GTMKAC	2 cut(s)	243, 899
Fnu4HI	GCNGC	6 cut(s)	23, 105, 476, 543, 929, 1719
FokI	GGATG	4 cut(s)	305, 728, 795, 1235
FriOI	GRGCYC	4 cut(s)	58, 193, 364, 1319
Fsp4HI	GCNGC	6 cut(s)	23, 105, 476, 543, 929, 1719
FspBI	CTAG	3 cut(s)	936, 1067, 1809
GluI	GCNGC	6 cut(s)	23, 105, 476, 543, 929, 1719
GsaI	CCCAGC	1 cut(s)	992
GsuI	CTGGAG	1 cut(s)	196
HaeIII	GGCC	7 cut(s)	62, 104, 368, 748, 1465, 1530, 1665
HapII	CCGG	4 cut(s)	483, 1290, 1466, 1658
HincII	GTYRAC	2 cut(s)	1195, 1339
HindII	GTYRAC	2 cut(s)	1195, 1339
HpaI	GTTAAC	1 cut(s)	1195
HpaII	CCGG	4 cut(s)	483, 1290, 1466, 1658
HphI	GGTGA	7 cut(s)	23, 331, 437, 446, 1026, 1039, 1077
Hpy166II	GTNNAC	8 cut(s)	244, 280, 823, 900, 917, 1195, 1339, 1373
Hpy188I	TCNGA	8 cut(s)	161, 180, 206, 564, 622, 850, 1354, 1492
Hpy8I	GTNNAC	8 cut(s)	244, 280, 823, 900, 917, 1195, 1339, 1373
HpyAV	CCTTC	4 cut(s)	310, 661, 1047, 1324
HpyCH4III	ACNGT	1 cut(s)	284
HpyCH4IV	ACGT	2 cut(s)	250, 1369
HpyF10VI	GCNNNNNNNGC	4 cut(s)	197, 657, 1060, 1271
HpySE526I	ACGT	2 cut(s)	250, 1369
Kpn2I	TCCGGA	1 cut(s)	1289
KspAI	GTTAAC	1 cut(s)	1195
LmnI	GCTCC	7 cut(s)	196, 267, 925, 997, 1256, 1322, 1715
Lsp1109I	GCAGC	4 cut(s)	34, 487, 554, 940
LweI	GCATC	5 cut(s)	613, 669, 699, 1252, 1609
MaeI	CTAG	3 cut(s)	936, 1067, 1809
MaeII	ACGT	2 cut(s)	250, 1369
MaeIII	GTNAC	4 cut(s)	425, 1083, 1396, 1612
MbiI	CCGCTC	1 cut(s)	1718
MflI	RGATCY	2 cut(s)	1304, 1402
MhlI	GDGCHC	6 cut(s)	58, 193, 282, 364, 405, 1319
MluCI	AATT	5 cut(s)	296, 1186, 1285, 1360, 1623
MlyI	GAGTC	5 cut(s)	21, 201, 240, 329, 1025
MmeI	TCCRAC	3 cut(s)	229, 351, 1430
MroI	TCCGGA	1 cut(s)	1289
MroXI	GAANNNNTTC	2 cut(s)	174, 1128
MseI	TTAA	5 cut(s)	299, 531, 960, 1194, 1773
MslI	CAYNNNNRTG	2 cut(s)	1026, 1078
MspA1I	CMGCKG	1 cut(s)	545
MspI	CCGG	4 cut(s)	483, 1290, 1466, 1658
MspR9I	CCNGG	6 cut(s)	777, 813, 966, 1092, 1271, 1659
Mva1269I	GAATGC	2 cut(s)	733, 1043
MvaI	CCWGG	5 cut(s)	777, 813, 966, 1092, 1271
MwoI	GCNNNNNNNGC	4 cut(s)	197, 657, 1060, 1271
NciI	CCSGG	1 cut(s)	1659
NmuCI	GTSAC	4 cut(s)	425, 1083, 1396, 1612
NspI	RCATGY	1 cut(s)	821
NspV	TTCGAA	1 cut(s)	1627
PceI	AGGCCT	1 cut(s)	748
PciI	ACATGT	1 cut(s)	817
PctI	GAATGC	2 cut(s)	733, 1043
PdmI	GAANNNNTTC	2 cut(s)	174, 1128
PfeI	GAWTC	6 cut(s)	136, 162, 175, 181, 1676, 1705
PfoI	TCCNGGA	1 cut(s)	811
PkrI	GCNGC	6 cut(s)	24, 106, 477, 544, 930, 1720
PleI	GAGTC	5 cut(s)	21, 201, 239, 329, 1025
PpsI	GAGTC	5 cut(s)	21, 201, 239, 329, 1025
PscI	ACATGT	1 cut(s)	817
Psp124BI	GAGCTC	4 cut(s)	58, 193, 364, 1319
Psp6I	CCWGG	5 cut(s)	775, 811, 964, 1090, 1269
PspEI	GGTNACC	1 cut(s)	1083
PspFI	CCCAGC	1 cut(s)	988
PspGI	CCWGG	5 cut(s)	775, 811, 964, 1090, 1269
PspPI	GGNCC	3 cut(s)	1529, 1565, 1664
PstNI	CAGNNNCTG	3 cut(s)	165, 782, 1603
PsuI	RGATCY	2 cut(s)	1304, 1402
RsaI	GTAC	3 cut(s)	824, 1374, 1389
RsaNI	GTAC	3 cut(s)	823, 1373, 1388
RseI	CAYNNNNRTG	2 cut(s)	1026, 1078
SacI	GAGCTC	4 cut(s)	58, 193, 364, 1319
SaqAI	TTAA	5 cut(s)	299, 531, 960, 1194, 1773
SatI	GCNGC	6 cut(s)	23, 105, 476, 543, 929, 1719
Sau96I	GGNCC	3 cut(s)	1529, 1565, 1664
ScaI	AGTACT	1 cut(s)	1389
SchI	GAGTC	5 cut(s)	21, 201, 240, 329, 1025
ScrFI	CCNGG	6 cut(s)	777, 813, 966, 1092, 1271, 1659
SduI	GDGCHC	6 cut(s)	58, 193, 282, 364, 405, 1319
SfaNI	GCATC	5 cut(s)	613, 669, 699, 1252, 1609
SfuI	TTCGAA	1 cut(s)	1627
SinI	GGWCC	1 cut(s)	1565
SmiMI	CAYNNNNRTG	2 cut(s)	1026, 1078
SmlI	CTYRAG	1 cut(s)	1668
SmoI	CTYRAG	1 cut(s)	1668
Sse9I	AATT	5 cut(s)	296, 1186, 1285, 1360, 1623
SseBI	AGGCCT	1 cut(s)	748
SsiI	CCGC	4 cut(s)	105, 130, 545, 1718
SspMI	CTAG	3 cut(s)	936, 1067, 1809
SstI	GAGCTC	4 cut(s)	58, 193, 364, 1319
StuI	AGGCCT	1 cut(s)	748
StyD4I	CCNGG	6 cut(s)	775, 811, 964, 1090, 1269, 1657
StyI	CCWWGG	1 cut(s)	1280
TaaI	ACNGT	1 cut(s)	284
TaiI	ACGT	2 cut(s)	253, 1372
TaqI	TCGA	5 cut(s)	150, 270, 432, 1627, 1708
TaqII	GACCGA	2 cut(s)	1218, 1582
TasI	AATT	5 cut(s)	296, 1186, 1285, 1360, 1623
TatI	WGTACW	2 cut(s)	1372, 1387
TauI	GCSGC	2 cut(s)	107, 1721
TfiI	GAWTC	6 cut(s)	136, 162, 175, 181, 1676, 1705
Tru1I	TTAA	5 cut(s)	299, 531, 960, 1194, 1773
Tru9I	TTAA	5 cut(s)	299, 531, 960, 1194, 1773
TscAI	CASTG	2 cut(s)	1463, 1608
TseFI	GTSAC	4 cut(s)	425, 1083, 1396, 1612
TseI	GCWGC	4 cut(s)	22, 475, 542, 928
Tsp45I	GTSAC	4 cut(s)	425, 1083, 1396, 1612
TspDTI	ATGAA	7 cut(s)	140, 309, 711, 920, 1227, 1311, 1415
TspGWI	ACGGA	5 cut(s)	64, 370, 1184, 1195, 1297
TspRI	CASTG	2 cut(s)	1463, 1608
VneI	GTGCAC	1 cut(s)	278
VpaK11BI	GGWCC	1 cut(s)	1565
XapI	RAATTY	2 cut(s)	1186, 1285
XbaI	TCTAGA	1 cut(s)	1066
XceI	RCATGY	1 cut(s)	821
XcmI	CCANNNNNNNNNTGG	1 cut(s)	220
XmiI	GTMKAC	2 cut(s)	243, 899
XmnI	GAANNNNTTC	2 cut(s)	174, 1128
XspI	CTAG	3 cut(s)	936, 1067, 1809
ZrmI	AGTACT	1 cut(s)	1389

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.