Rroxscaffold_3G00229860

Sister chromatid cohesion 1 protein 1-like

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000003
Physical Location & Seq
Forward (+)
14441163 .. 14446066
4904 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_3G00229860.1

Sequence Viewer

Length: 1863 bp
ATGTTCTACTCTCACAGCCTCCTTGCTCGCAAAGAGCCGCTCGGCCAAATCTGGATGGCCGCCACCATGCACGCCAAGATGAACCGCAGGAATCTCAACCAGATCGACCTCATCAGAATCTGCGAAGAGATTTTGAATCCAAGAGCTCCTATGGCTCTCCGACTCTCCAGTATTCTCATGGGTGGAGTCGTCATCGTCTACGAACGTAAAGTGAAGCTCCTATTCGATGATGTGCACCGTCTTCTGGATCAATTAAACGAAGCATGGAAGAAGGTGAAATCCAACACAGACTCCACTGTCCTCCCCAAACGGAGAGCTCAGGCCAAGAAAGAAGCAATAACTCTGCCCGAGGCTGAGCATGAAGATACAGATCTTGGTGGTGGTAGAGACATTGACATCGAGCAGTCTCTTGATTTTTCTCACCATGCCACGCTTTTCCAGCAGCAAACCGGTTATTTTCTCATGCAACTGGATAGCGTAGATGTGGGAGAAACACTTGACGATAATGCAGTGGAGGGAGATCAACATCAGAACTTACATCAAGCTGATCCTGAGGACATCACATTGCCTAAATGTTATGATCCATCAGATGCACTTGCAGATTTGTTCAACCGTCACTTTGAGAGATTTGAAATCGAGGGAGATAACGTAGACCTCACATCAGGAGAGCCCACACATATTCGACCACCTTCTCCAAATTATCTAATACCTTCTCCACCTCGTCAAGACCAGCATCAGGAAGGACAGCAGGCTAATAATGTGTTTGTTGAAGTGGTGCAGATGCAGGATGTTGAAGAGAATGCTCAACAGAGGCAGAGGCCTATAAGGAGGAGAAAGAGAAAAACACCAGCCTCTGTAATGGATAATGACCAAACAATCCATCCTGGACATGTGTACCAATCTTGGCTTCAAGATACTTCAGATATAGTTTCAAGAAGAAGACAAAACCAAAAGCCCAAGAACATAATGTCTACTATGAAGATTGGTAAACTCATGGAGCAGCCAGCTAGTGTTCTCATGGGTCGTTTATTTAAACCTGGAAGTGGAGAAACATATTATCCAGTTCCTCTATTAGAGCTATTCAAGGAAATGCATACCCATGACTCACCTCCTGCATTCACCTCGCCACCTCTGCCTCCAGAACCATCATCATGGTCACCACCTGGAAGACAAACTTATGAAGACCTGCCTGTTGAAGATTTTCTTAGTGGAGGTGGCTCCCAATCGTTTGCAACTCCCACGGAACAGATACGAACAAATTTAGTTAACAATGACCGACAACATGAAGTGCTGGATGATCTGCGAGCCAGTCTTATTGGCAAGAGAGGAGCTGATGCCAACCTGGCAACACCAAGGAATTCTGGAGATGAAAGAAGATCCGTCCTGAGCTCCTCGTCTGGGAAGGGAGTTGACAAAAACAGTTCAGAAGTCAATTCAGGACGATCCAACAGGAAAAGGCGTTATTCATCTAAACATAGCAACAATGGACTTGAACCAGTGTCGGAGGATAATGGATATCATCACTCTGATCCAAACTTCAAGGTATCATGGTTATCTGGAAATGGCCCAACACCTGAGCAAGAACTATTAATGGAAACTGGACCGACACAGACACAACAACCTATCATCAATCAGCCACTGGAAAAAGTGACTGATGCAATTCGAATGGAACTGAAATCCCATTTTGAAATACCGGGTGGCCCTCAAGTAGAATCCCTGAACAACCTGACTACTGGACTGAATCGAAGAGGAGCGGCTTTGCTTTTCTATCAAACTTGTGTTCTTGCTACTCGTGATTTCGTAAAAGTTAAACAAAATGCCCCTTACGAGGATATTCTAATTACTAGAGGATCAAATATGTAA

Protein Analysis

620

Amino Acids

69.93

Weight (kDa)

5.89

Isoelectric Point (pI)

55.75

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Rad21_Rec8_N PF04825 1 - 100 2.5e-31 N terminus of Rad21 / Rec8 like protein
Rad21_Rec8 PF04824 568 - 620 7.1e-19 Conserved region of Rad21 / Rec8 like protein
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000542)

Species Orthologous Gene IDs
arabidopsis_thaliana AT5G05490 AT5G05490
fragaria_vesca FvH4_5g27761 FvH4_5g31060 FvH4_5g35270
malus_domestica MD12G1179600.v1.1
prunus_persica Prupe.2G254800_v2.0.a1 Prupe.2G254800_v2.0.a1
pyrus_communis pycom12g16940
rosa_chinensis RchiOBHm_Chr0c11g0499361 RchiOBHm_Chr0c11g0499371 RchiOBHm_Chr0c11g0499561 RchiOBHm_Chr0c11g0499571 RchiOBHm_Chr0c11g0499581 RchiOBHm_Chr5g0049691 RchiOBHm_Chr5g0049701 RchiOBHm_Chr7g0230591 RchiOBHm_Chr7g0230601 RchiOBHm_Chr7g0231161 RchiOBHm_Chr7g0231171 RchiOBHm_Chr7g0231181 RchiOBHm_Chr7g0236141 RchiOBHm_Chr7g0236431 RchiOBHm_Chr7g0236461 RchiOBHm_Chr7g0236501
rosa_laevigata RLG00000001078 RLG00000001102 RLG00000001195 RLG00000001205 RLG00000001937 RLG00000030015 RLG00000030017
rosa_multiflora Rmu_co8170892.1_g000001 Rmu_co8276489.1_g000001 Rmu_sc0000112.1_g000006 Rmu_sc0000768.1_g000037 Rmu_sc0002222.1_g000015 Rmu_sc0002449.1_g000012 Rmu_sc0002449.1_g000029 Rmu_sc0002905.1_g000001 Rmu_sc0003720.1_g000008 Rmu_sc0005578.1_g000004 Rmu_sc0010974.1_g000001 Rmu_sc0010983.1_g000001
rosa_roxburghii Rroxscaffold_3G00225060 Rroxscaffold_3G00225070 Rroxscaffold_3G00225350 Rroxscaffold_3G00226600 Rroxscaffold_3G00229860
rosa_rugosa Rorug07G0294500 Rorug07G0294600 Rorug07G0295300 Rorug07G0297000
rosa_samantha Rh1AG102400 Rh5BG337600 Rh5DG349800 Rh7AG413200 Rh7AG440900 Rh7AG448200 Rh7AG448700 Rh7AG449500 Rh7AG451400 Rh7AG452700 Rh7AG452800 Rh7AG453000 Rh7AG453100 Rh7CG431600 Rh7CG432100 Rh7CG453400 Rh7CG469500 Rh7CG471500 Rh7DG368200 Rh7DG409000 Rh7DG430700 Rh7DG438900 Rh7DG440800
rosa_wichuraiana Rw1G008170 Rw7G034070 Rw7G036650 Rw7G036670 Rw7G036710 Rw7G037350 Rw7G037530 Rw7G037600

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 296
Acc36I ACCTGC 1 cut(s) 1194
AccBSI CCGCTC 2 cut(s) 40, 1754
AccI GTMKAC 3 cut(s) 198, 651, 971
AciI CCGC 4 cut(s) 38, 60, 85, 1754
AclWI GGATC 7 cut(s) 255, 542, 575, 1371, 1437, 1523, 1858
AcoI YGGCCR 2 cut(s) 43, 57
AcsI RAATTY 2 cut(s) 1258, 1357
AcuI CTGAAG 1 cut(s) 903
AfaI GTAC 1 cut(s) 896
AfiI CCNNNNNNNGG 5 cut(s) 244, 736, 1043, 1398, 1828
AflIII ACRYGT 1 cut(s) 889
AgeI ACCGGT 1 cut(s) 449
AjnI CCWGG 4 cut(s) 883, 1036, 1162, 1341
AjuI GAANNNNNNNTTGG 2 cut(s) 891, 923
AluBI AGCT 8 cut(s) 146, 217, 317, 545, 1007, 1078, 1331, 1389
AluI AGCT 8 cut(s) 146, 217, 317, 545, 1007, 1078, 1331, 1389
Alw21I GWGCWC 4 cut(s) 148, 237, 319, 1391
Alw26I GTCTC 2 cut(s) 381, 411
Alw44I GTGCAC 1 cut(s) 233
AlwI GGATC 7 cut(s) 255, 542, 575, 1371, 1437, 1523, 1858
AlwNI CAGNNNCTG 3 cut(s) 120, 854, 1639
Ama87I CYCGRG 1 cut(s) 347
AoxI GGCC 6 cut(s) 43, 57, 321, 818, 1564, 1699
ApaLI GTGCAC 1 cut(s) 233
ApeKI GCWGC 2 cut(s) 442, 1000
ApoI RAATTY 2 cut(s) 1258, 1357
AseI ATTAAT 1 cut(s) 1589
AsiGI ACCGGT 1 cut(s) 449
Asp700I GAANNNNTTC 1 cut(s) 1200
AspS9I GGNCC 3 cut(s) 1565, 1601, 1700
AsuC2I CCSGG 1 cut(s) 1695
AsuHPI GGTGA 5 cut(s) 286, 413, 1098, 1111, 1149
AsuII TTCGAA 1 cut(s) 1663
AvaI CYCGRG 1 cut(s) 347
AvaII GGWCC 1 cut(s) 1601
AxyI CCTNAGG 1 cut(s) 552
BaeGI GKGCMC 1 cut(s) 237
BaeI ACNNNNGTAYC 2 cut(s) 878, 911
BanII GRGCYC 4 cut(s) 148, 319, 672, 1391
BauI CACGAG 1 cut(s) 1791
BbsI GAAGAC 4 cut(s) 233, 946, 1174, 1188
Bbv12I GWGCWC 4 cut(s) 148, 237, 319, 1391
BbvI GCAGC 2 cut(s) 454, 1012
BccI CCATC 4 cut(s) 49, 592, 888, 1153
BcgI CGANNNNNNTGC 2 cut(s) 1104, 1138
BciT130I CCWGG 4 cut(s) 885, 1038, 1164, 1343
BcnI CCSGG 1 cut(s) 1695
BcoDI GTCTC 2 cut(s) 381, 411
BfaI CTAG 2 cut(s) 1008, 1845
BfuAI ACCTGC 1 cut(s) 1194
BglI GCCNNNNNGGC 1 cut(s) 1343
BglII AGATCT 1 cut(s) 370
BisI GCNGC 5 cut(s) 38, 60, 443, 1001, 1755
BlpI GCTNAGC 1 cut(s) 354
BlsI GCNGC 5 cut(s) 39, 61, 444, 1002, 1756
Bme1390I CCNGG 5 cut(s) 885, 1038, 1164, 1343, 1695
Bme18I GGWCC 1 cut(s) 1601
BmeT110I CYCGRG 1 cut(s) 347
BmgT120I GGNCC 3 cut(s) 1565, 1601, 1700
BmiI GGNNCC 1 cut(s) 1219
BmrFI CCNGG 5 cut(s) 885, 1038, 1164, 1343, 1695
BmsI GCATC 5 cut(s) 580, 742, 771, 1324, 1645
BpiI GAAGAC 4 cut(s) 233, 946, 1174, 1188
BpmI CTGGAG 3 cut(s) 151, 1122, 1383
Bpu10I CCTNAGC 3 cut(s) 318, 1385, 1575
Bpu1102I GCTNAGC 1 cut(s) 354
Bpu14I TTCGAA 1 cut(s) 1663
BpuEI CTTGAG 1 cut(s) 1689
BpuMI CCSGG 1 cut(s) 1695
BsaBI GATNNNNATC 2 cut(s) 369, 525
BsaJI CCNNGG 3 cut(s) 348, 1239, 1352
BsaWI WCCGGW 1 cut(s) 449
BsaXI ACNNNNNCTCC 4 cut(s) 275, 305, 633, 663
Bsc4I CCNNNNNNNGG 5 cut(s) 244, 736, 1043, 1398, 1828
Bse118I RCCGGY 1 cut(s) 449
Bse1I ACTGG 8 cut(s) 168, 474, 1061, 1308, 1496, 1603, 1644, 1738
Bse21I CCTNAGG 1 cut(s) 552
Bse3DI GCAATG 1 cut(s) 563
Bse8I GATNNNNATC 2 cut(s) 369, 525
BseBI CCWGG 4 cut(s) 885, 1038, 1164, 1343
BseDI CCNNGG 3 cut(s) 348, 1239, 1352
BseGI GGATG 4 cut(s) 60, 793, 880, 1300
BseJI GATNNNNATC 2 cut(s) 369, 525
BseLI CCNNNNNNNGG 5 cut(s) 244, 736, 1043, 1398, 1828
BseMI GCAATG 1 cut(s) 563
BseMII CTCAG 5 cut(s) 332, 345, 543, 1376, 1566
BseNI ACTGG 8 cut(s) 168, 474, 1061, 1308, 1496, 1603, 1644, 1738
BseRI GAGGAG 4 cut(s) 844, 1341, 1381, 1764
BseSI GKGCMC 1 cut(s) 237
BseXI GCAGC 2 cut(s) 454, 1012
BsgI GTGCAG 1 cut(s) 797
BshFI GGCC 6 cut(s) 45, 59, 323, 820, 1566, 1701
BshTI ACCGGT 1 cut(s) 449
BsiHKAI GWGCWC 4 cut(s) 148, 237, 319, 1391
BsiHKCI CYCGRG 1 cut(s) 347
BsiSI CCGG 2 cut(s) 450, 1694
BslI CCNNNNNNNGG 5 cut(s) 244, 736, 1043, 1398, 1828
BsmAI GTCTC 2 cut(s) 381, 411
BsmI GAATGC 2 cut(s) 805, 1115
BsnI GGCC 6 cut(s) 45, 59, 323, 820, 1566, 1701
BsoBI CYCGRG 1 cut(s) 347
Bsp119I TTCGAA 1 cut(s) 1663
Bsp1286I GDGCHC 5 cut(s) 148, 237, 319, 672, 1391
Bsp1720I GCTNAGC 1 cut(s) 354
BspACI CCGC 4 cut(s) 38, 60, 85, 1754
BspANI GGCC 6 cut(s) 45, 59, 323, 820, 1566, 1701
BspCNI CTCAG 5 cut(s) 331, 346, 544, 1377, 1567
BspLI GGNNCC 1 cut(s) 1219
BspMI ACCTGC 1 cut(s) 1194
BspPI GGATC 7 cut(s) 255, 542, 575, 1371, 1437, 1523, 1858
BspT104I TTCGAA 1 cut(s) 1663
BsrBI CCGCTC 2 cut(s) 40, 1754
BsrDI GCAATG 1 cut(s) 563
BsrFI RCCGGY 1 cut(s) 449
BsrI ACTGG 8 cut(s) 168, 474, 1061, 1308, 1496, 1603, 1644, 1738
BssAI RCCGGY 1 cut(s) 449
BssECI CCNNGG 3 cut(s) 348, 1239, 1352
BssSI CACGAG 1 cut(s) 1791
BssT1I CCWWGG 1 cut(s) 1352
Bst2BI CACGAG 1 cut(s) 1791
Bst2UI CCWGG 4 cut(s) 885, 1038, 1164, 1343
Bst4CI ACNGT 4 cut(s) 239, 298, 614, 1421
Bst6I CTCTTC 3 cut(s) 120, 789, 1741
BstBI TTCGAA 1 cut(s) 1663
BstC8I GCNNGC 5 cut(s) 28, 72, 750, 1005, 1305
BstDEI CTNAG 6 cut(s) 318, 354, 552, 1205, 1385, 1575
BstDSI CCRYGG 1 cut(s) 1239
BstEII GGTNACC 1 cut(s) 1155
BstF5I GGATG 4 cut(s) 60, 793, 880, 1300
BstMAI GTCTC 2 cut(s) 381, 411
BstMWI GCNNNNNNNGC 4 cut(s) 152, 439, 1132, 1343
BstNI CCWGG 4 cut(s) 885, 1038, 1164, 1343
BstNSI RCATGY 1 cut(s) 893
BstPI GGTNACC 1 cut(s) 1155
BstSCI CCNGG 5 cut(s) 883, 1036, 1162, 1341, 1693
BstSLI GKGCMC 1 cut(s) 237
BstV1I GCAGC 2 cut(s) 454, 1012
BstV2I GAAGAC 4 cut(s) 233, 946, 1174, 1188
BstX2I RGATCY 2 cut(s) 370, 1376
BstXI CCANNNNNNTGG 1 cut(s) 1152
BstYI RGATCY 2 cut(s) 370, 1376
Bsu36I CCTNAGG 1 cut(s) 552
BsuRI GGCC 6 cut(s) 45, 59, 323, 820, 1566, 1701
BtgI CCRYGG 1 cut(s) 1239
BtsCI GGATG 4 cut(s) 60, 793, 880, 1300
BtsI GCAGTG 1 cut(s) 516
BtsIMutI CAGTG 4 cut(s) 294, 516, 1503, 1637
BveI ACCTGC 1 cut(s) 1194
Cac8I GCNNGC 5 cut(s) 28, 72, 750, 1005, 1305
CaiI CAGNNNCTG 3 cut(s) 120, 854, 1639
Cfr10I RCCGGY 1 cut(s) 449
Cfr13I GGNCC 3 cut(s) 1565, 1601, 1700
Csp6I GTAC 1 cut(s) 895
CspAI ACCGGT 1 cut(s) 449
CviQI GTAC 1 cut(s) 895
DdeI CTNAG 6 cut(s) 318, 354, 552, 1205, 1385, 1575
DraI TTTAAA 1 cut(s) 1033
DrdI GACNNNNNNGTC 1 cut(s) 296
DseDI GACNNNNNNGTC 1 cut(s) 296
EaeI YGGCCR 2 cut(s) 43, 57
Eam1104I CTCTTC 3 cut(s) 120, 789, 1741
EarI CTCTTC 3 cut(s) 120, 789, 1741
Ecl136II GAGCTC 3 cut(s) 146, 317, 1389
Eco130I CCWWGG 1 cut(s) 1352
Eco147I AGGCCT 1 cut(s) 820
Eco24I GRGCYC 4 cut(s) 148, 319, 672, 1391
Eco32I GATATC 1 cut(s) 1517
Eco47I GGWCC 1 cut(s) 1601
Eco53kI GAGCTC 3 cut(s) 146, 317, 1389
Eco57I CTGAAG 1 cut(s) 903
Eco81I CCTNAGG 1 cut(s) 552
Eco88I CYCGRG 1 cut(s) 347
Eco91I GGTNACC 1 cut(s) 1155
EcoICRI GAGCTC 3 cut(s) 146, 317, 1389
EcoO65I GGTNACC 1 cut(s) 1155
EcoRI GAATTC 1 cut(s) 1357
EcoRII CCWGG 4 cut(s) 883, 1036, 1162, 1341
EcoRV GATATC 1 cut(s) 1517
EcoT14I CCWWGG 1 cut(s) 1352
EcoT22I ATGCAT 1 cut(s) 1095
EcoT38I GRGCYC 4 cut(s) 148, 319, 672, 1391
ErhI CCWWGG 1 cut(s) 1352
FalI AAGNNNNNCTT 4 cut(s) 1159, 1191, 1188, 1220
FblI GTMKAC 3 cut(s) 198, 651, 971
Fnu4HI GCNGC 5 cut(s) 38, 60, 443, 1001, 1755
FokI GGATG 4 cut(s) 67, 800, 867, 1307
FriOI GRGCYC 4 cut(s) 148, 319, 672, 1391
Fsp4HI GCNGC 5 cut(s) 38, 60, 443, 1001, 1755
FspBI CTAG 2 cut(s) 1008, 1845
GluI GCNGC 5 cut(s) 38, 60, 443, 1001, 1755
GsuI CTGGAG 3 cut(s) 151, 1122, 1383
HaeIII GGCC 6 cut(s) 45, 59, 323, 820, 1566, 1701
HapII CCGG 2 cut(s) 450, 1694
HincII GTYRAC 2 cut(s) 1267, 1411
HindII GTYRAC 2 cut(s) 1267, 1411
HinfI GANTC 9 cut(s) 91, 117, 136, 162, 186, 290, 1103, 1712, 1741
HpaI GTTAAC 1 cut(s) 1267
HpaII CCGG 2 cut(s) 450, 1694
HphI GGTGA 5 cut(s) 286, 413, 1098, 1111, 1149
Hpy166II GTNNAC 8 cut(s) 199, 235, 652, 895, 972, 989, 1267, 1411
Hpy188I TCNGA 8 cut(s) 116, 161, 531, 589, 922, 1426, 1504, 1528
Hpy8I GTNNAC 8 cut(s) 199, 235, 652, 895, 972, 989, 1267, 1411
HpyAV CCTTC 5 cut(s) 265, 699, 720, 734, 1396
HpyCH4III ACNGT 4 cut(s) 239, 298, 614, 1421
HpyCH4IV ACGT 2 cut(s) 205, 648
HpyF10VI GCNNNNNNNGC 4 cut(s) 152, 439, 1132, 1343
HpyF3I CTNAG 6 cut(s) 318, 354, 552, 1205, 1385, 1575
HpySE526I ACGT 2 cut(s) 205, 648
KspAI GTTAAC 1 cut(s) 1267
LmnI GCTCC 7 cut(s) 151, 222, 997, 1223, 1328, 1394, 1751
Lsp1109I GCAGC 2 cut(s) 454, 1012
LweI GCATC 5 cut(s) 580, 742, 771, 1324, 1645
MaeI CTAG 2 cut(s) 1008, 1845
MaeII ACGT 2 cut(s) 205, 648
MaeIII GTNAC 3 cut(s) 614, 1155, 1648
MbiI CCGCTC 2 cut(s) 40, 1754
MflI RGATCY 2 cut(s) 370, 1376
MhlI GDGCHC 5 cut(s) 148, 237, 319, 672, 1391
MluCI AATT 7 cut(s) 251, 697, 1258, 1357, 1432, 1659, 1839
MlyI GAGTC 4 cut(s) 156, 195, 284, 1097
MmeI TCCRAC 4 cut(s) 184, 306, 1470, 1482
Mph1103I ATGCAT 1 cut(s) 1095
MroXI GAANNNNTTC 1 cut(s) 1200
MseI TTAA 5 cut(s) 254, 1032, 1266, 1589, 1809
MslI CAYNNNNRTG 2 cut(s) 1098, 1150
MspI CCGG 2 cut(s) 450, 1694
MspR9I CCNGG 5 cut(s) 885, 1038, 1164, 1343, 1695
Mva1269I GAATGC 2 cut(s) 805, 1115
MvaI CCWGG 4 cut(s) 885, 1038, 1164, 1343
MwoI GCNNNNNNNGC 4 cut(s) 152, 439, 1132, 1343
NciI CCSGG 1 cut(s) 1695
NlaIV GGNNCC 1 cut(s) 1219
NmeAIII GCCGAG 1 cut(s) 21
NmuCI GTSAC 3 cut(s) 614, 1155, 1648
NsiI ATGCAT 1 cut(s) 1095
NspI RCATGY 1 cut(s) 893
NspV TTCGAA 1 cut(s) 1663
PceI AGGCCT 1 cut(s) 820
PciI ACATGT 1 cut(s) 889
PctI GAATGC 2 cut(s) 805, 1115
PdmI GAANNNNTTC 1 cut(s) 1200
PfeI GAWTC 5 cut(s) 91, 117, 136, 1712, 1741
PfoI TCCNGGA 1 cut(s) 883
PinAI ACCGGT 1 cut(s) 449
PkrI GCNGC 5 cut(s) 39, 61, 444, 1002, 1756
PleI GAGTC 4 cut(s) 156, 194, 284, 1097
PpsI GAGTC 4 cut(s) 156, 194, 284, 1097
PscI ACATGT 1 cut(s) 889
PshBI ATTAAT 1 cut(s) 1589
Psp124BI GAGCTC 3 cut(s) 148, 319, 1391
Psp6I CCWGG 4 cut(s) 883, 1036, 1162, 1341
PspEI GGTNACC 1 cut(s) 1155
PspGI CCWGG 4 cut(s) 883, 1036, 1162, 1341
PspN4I GGNNCC 1 cut(s) 1219
PspPI GGNCC 3 cut(s) 1565, 1601, 1700
PstNI CAGNNNCTG 3 cut(s) 120, 854, 1639
PsuI RGATCY 2 cut(s) 370, 1376
RsaI GTAC 1 cut(s) 896
RsaNI GTAC 1 cut(s) 895
RseI CAYNNNNRTG 2 cut(s) 1098, 1150
SacI GAGCTC 3 cut(s) 148, 319, 1391
SaqAI TTAA 5 cut(s) 254, 1032, 1266, 1589, 1809
SatI GCNGC 5 cut(s) 38, 60, 443, 1001, 1755
Sau96I GGNCC 3 cut(s) 1565, 1601, 1700
SchI GAGTC 4 cut(s) 156, 195, 284, 1097
ScrFI CCNGG 5 cut(s) 885, 1038, 1164, 1343, 1695
SduI GDGCHC 5 cut(s) 148, 237, 319, 672, 1391
SfaNI GCATC 5 cut(s) 580, 742, 771, 1324, 1645
SfuI TTCGAA 1 cut(s) 1663
SinI GGWCC 1 cut(s) 1601
SmiMI CAYNNNNRTG 2 cut(s) 1098, 1150
SmlI CTYRAG 1 cut(s) 1704
SmoI CTYRAG 1 cut(s) 1704
Sse9I AATT 7 cut(s) 251, 697, 1258, 1357, 1432, 1659, 1839
SseBI AGGCCT 1 cut(s) 820
SsiI CCGC 4 cut(s) 38, 60, 85, 1754
SspMI CTAG 2 cut(s) 1008, 1845
SstI GAGCTC 3 cut(s) 148, 319, 1391
StuI AGGCCT 1 cut(s) 820
StyD4I CCNGG 5 cut(s) 883, 1036, 1162, 1341, 1693
StyI CCWWGG 1 cut(s) 1352
TaaI ACNGT 4 cut(s) 239, 298, 614, 1421
TaiI ACGT 2 cut(s) 208, 651
TaqI TCGA 7 cut(s) 105, 225, 399, 636, 682, 1663, 1744
TaqII GACCGA 2 cut(s) 1290, 1618
TasI AATT 7 cut(s) 251, 697, 1258, 1357, 1432, 1659, 1839
TauI GCSGC 3 cut(s) 40, 62, 1757
TfiI GAWTC 5 cut(s) 91, 117, 136, 1712, 1741
Tru1I TTAA 5 cut(s) 254, 1032, 1266, 1589, 1809
Tru9I TTAA 5 cut(s) 254, 1032, 1266, 1589, 1809
TscAI CASTG 4 cut(s) 301, 516, 1503, 1644
TseFI GTSAC 3 cut(s) 614, 1155, 1648
TseI GCWGC 2 cut(s) 442, 1000
Tsp45I GTSAC 3 cut(s) 614, 1155, 1648
TspDTI ATGAA 7 cut(s) 95, 375, 992, 1194, 1299, 1383, 1455
TspGWI ACGGA 3 cut(s) 325, 1256, 1369
TspRI CASTG 4 cut(s) 301, 516, 1503, 1644
VneI GTGCAC 1 cut(s) 233
VpaK11BI GGWCC 1 cut(s) 1601
VspI ATTAAT 1 cut(s) 1589
XapI RAATTY 2 cut(s) 1258, 1357
XceI RCATGY 1 cut(s) 893
XcmI CCANNNNNNNNNTGG 1 cut(s) 175
XmiI GTMKAC 3 cut(s) 198, 651, 971
XmnI GAANNNNTTC 1 cut(s) 1200
XspI CTAG 2 cut(s) 1008, 1845
Zsp2I ATGCAT 1 cut(s) 1095
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.