MD05G1337700.v1.1

transmembrane receptor protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000699
Physical Location & Seq
Reverse (-)
45921403 .. 45924506
3104 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1337700.v1.1.491

Sequence Viewer

Length: 1983 bp
ATGATGAGGAATATGTCTACGATCCCTTTTCTGTTTCTCATGAGTTTGATCGCTAGAAGTGAAGCAGTTCGTTACTTCAGCCATCTCTGCCCAAACACTACCACTTTCACCCCGGCCGAAGTATTCGAATCCGACCCCGACAGCTTCCAATATAATCTCGGTCAACTTCTCAAATCCCTTTCCTCGAACGCCACACGTACTGACACCGGATTTTACACTGCCACCGCTGGCCGAAACTCAACTGAAAAGGCATATGGGATGTTTCTATGTCGCGGTGATGTCTCTACCGAGGTTTGCAAAGAGTGCGTGCCCGATGCAATCGTGGAGGCAGCACAACGCTGCCCTGATATAAAAGAGGTTACCATATGGTTCGACGAGTGCATGCTACGCTACTCGAATGAGACATTACTTTTCTCGATGAACATTTCGCTCGCAACGGGCGTGTTGGACGAGGTTAATGTTACAGAACCAAGAGGATTTACCCTGAATATGAGTGAACTAACCACTGAGGCTGCCAATAACAGCAAGTACTTTGCAACCAAAGAAGCCAAAGTTGAAGGGTCAAATGAGACGCTGTACAGCCTTGTGCAGTGCACGCAGGATCTCTCTGCTTCAGATTGCAAACGTTGTCTGGAAAAAGCTGCAGAACAATTAGTTTCATTTGGAACCCAATTGGGACGATTGCAATATCCCAGTTGTACCGTTTGGATCGATACTACCCTCTTTTACGCCATCAATCGGACCGACGCACAGCATCCTCCCACACCAGAGGCTCTTCCTCCTCCTAGTACTCTACTACCAAATTCGCGATTACCTATAGGAAGAAAGAATCGCTTCTCTATAACTATCATTGTTGTTGTGAGTGTCGTAATTGCTCTTCTAGTTGCCTCTCTGGTCCTTGTAGCATTGGGCTACTGCCTCCCAGGCAGAAGAGAAACAAAGAAGAACGATGAGGCTCTACAACAAGAAAATGGCAAACAGCAAGATATGAGGACGGCTGAGTCCTTGCAATTTGATTTGGGAACTCTCGAAACTGCCACAAATAAGTTTTCCGAAGATAACAAGTTAGGCGAAGGTGGATTCGGTGCAGTTTTTAAGGGAATGCTAAGCGATGGCCAAGAAATACCAGTAAAGAGGTTGTCAAAAAGCTCTGGACAAGGTGTAGAAGAATTTAAGAATGAGGTTGTGTTGGTAGCCAAGCTTCAACACAGAAATCTTGTCAGGCTTTTAGGATTTTGCTTGGAAGGAGAAGAAACCTTACTTGTTTATGAATATGTGCCTAACAAAAGCCTTGATTATTTTCTGTTTGATTGGTTGAGCCGCACCATGATAATTGGAGGAATTGCTCGAGGAATTTTGTATCTCCATGAAGATTCAAGGCTTAGAATTATACATCGTGATTTGAAAGCTAGCAACATTTTATTAGACAGCAACATGAACCCGAAAATATCAGATTTTGGGATGGCTAGAATGTTTGGAGTTGATGATCAAACTGAAGGAAATACCAAAAGAATTGTTGGTACTTACGGTTACATGGCTCCAGAATATGCTATGGAAGGGTTGTATTCAGTAAAATCGGATGTCTTCAGCTTCGGAGTACTTCTGCTTGAGATCATAACGGGGAGAAGGAACTTTTTAGGCTTTCATCGCACAAATTGTAAACCTACTCTTATAGGTTATGCTTGGCAATTATGGAATGAAACGAAAGGGTTGGAGTTGATGGATCCCTTGTTAAAAGATTCCTGCCGTCCAAATGAATTTTTGAGGTACATCCACATTGGACTATTGTGTGTTCAAGAAGATGCAAACAACAGGCCGACCATGTCCTCAGTTGTTCTTATGTTAAAAAGTGAAACTATTATTCTTCCCAGACCTGAGAAACCAGCCTTCTTTACAGGAGGATACGTTGACCACCATGATCAAGTGCGTCCTCAAGATTGCTCAGGCAATGGTTTGACCATTTCTATCGATGTTCCTCGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr Stress-antifung

Protein Analysis

661

Amino Acids

73.88

Weight (kDa)

5.47

Isoelectric Point (pI)

43.06

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 44 - 134 2.3e-23 Salt stress response/antifungal
Stress-antifung PF01657 156 - 238 2.4e-09 Salt stress response/antifungal
Pkinase PF00069 351 - 552 4.2e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 353 - 612 1.6e-43 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 1000
AccI GTMKAC 1 cut(s) 17
AccII CGCG 2 cut(s) 273, 808
AciI CCGC 3 cut(s) 225, 273, 1321
AclI AACGTT 1 cut(s) 625
AclWI GGATC 5 cut(s) 16, 609, 716, 1718, 1731
AcoI YGGCCR 3 cut(s) 114, 229, 1114
AcsI RAATTY 4 cut(s) 802, 1169, 1353, 1757
AcuI CTGAAG 4 cut(s) 61, 597, 1515, 1570
AfaI GTAC 8 cut(s) 199, 530, 578, 700, 790, 1522, 1599, 1769
AfiI CCNNNNNNNGG 1 cut(s) 738
AflIII ACRYGT 1 cut(s) 194
AgsI TTSAA 5 cut(s) 557, 1205, 1377, 1405, 1796
AjnI CCWGG 1 cut(s) 922
AluBI AGCT 6 cut(s) 144, 641, 1149, 1201, 1409, 1590
AluI AGCT 6 cut(s) 144, 641, 1149, 1201, 1409, 1590
Alw21I GWGCWC 1 cut(s) 596
Alw26I GTCTC 3 cut(s) 286, 395, 563
Alw44I GTGCAC 1 cut(s) 592
AlwI GGATC 5 cut(s) 16, 609, 716, 1718, 1731
Ama87I CYCGRG 1 cut(s) 1347
AoxI GGCC 4 cut(s) 114, 229, 1114, 1814
ApaLI GTGCAC 1 cut(s) 592
ApeKI GCWGC 4 cut(s) 329, 339, 512, 641
ApoI RAATTY 4 cut(s) 802, 1169, 1353, 1757
Asp700I GAANNNNTTC 2 cut(s) 66, 833
AspS9I GGNCC 2 cut(s) 741, 895
AsuC2I CCSGG 1 cut(s) 113
AsuHPI GGTGA 2 cut(s) 100, 287
AsuII TTCGAA 1 cut(s) 126
AsuNHI GCTAGC 1 cut(s) 1409
AvaI CYCGRG 1 cut(s) 1347
AvaII GGWCC 2 cut(s) 741, 895
BaeGI GKGCMC 2 cut(s) 312, 596
BalI TGGCCA 1 cut(s) 1116
BamHI GGATCC 1 cut(s) 1723
BarI GAAGNNNNNNTAC 6 cut(s) 861, 893, 1185, 1217, 1242, 1274
BbsI GAAGAC 1 cut(s) 1576
Bbv12I GWGCWC 1 cut(s) 596
BbvI GCAGC 4 cut(s) 326, 341, 499, 628
BccI CCATC 5 cut(s) 90, 740, 1106, 1456, 1714
BceAI ACGGC 2 cut(s) 1011, 1731
BciT130I CCWGG 1 cut(s) 924
BciVI GTATCC 1 cut(s) 1895
BclI TGATCA 2 cut(s) 1486, 1918
BcnI CCSGG 1 cut(s) 113
BcoDI GTCTC 3 cut(s) 286, 395, 563
BfaI CTAG 5 cut(s) 54, 786, 881, 1410, 1467
BfmI CTRYAG 2 cut(s) 642, 816
BfuI GTATCC 1 cut(s) 1895
BglI GCCNNNNNGGC 1 cut(s) 924
BisI GCNGC 5 cut(s) 330, 340, 513, 642, 1321
BlpI GCTNAGC 1 cut(s) 1106
BlsI GCNGC 5 cut(s) 331, 341, 514, 643, 1322
BmcAI AGTACT 3 cut(s) 530, 790, 1599
Bme1390I CCNGG 2 cut(s) 113, 924
Bme18I GGWCC 2 cut(s) 741, 895
BmeT110I CYCGRG 1 cut(s) 1347
BmgT120I GGNCC 2 cut(s) 741, 895
BmiI GGNNCC 3 cut(s) 667, 1539, 1725
BmrFI CCNGG 2 cut(s) 113, 924
BmrI ACTGGG 1 cut(s) 687
BmsI GCATC 3 cut(s) 304, 763, 1792
BmtI GCTAGC 1 cut(s) 1413
BmuI ACTGGG 1 cut(s) 687
BpiI GAAGAC 1 cut(s) 1576
BpmI CTGGAG 1 cut(s) 1524
Bpu10I CCTNAGC 1 cut(s) 1942
Bpu1102I GCTNAGC 1 cut(s) 1106
Bpu14I TTCGAA 1 cut(s) 126
BpuEI CTTGAG 2 cut(s) 1628, 1917
BpuMI CCSGG 1 cut(s) 113
Bsa29I ATCGAT 2 cut(s) 711, 1968
BsaAI YACGTR 1 cut(s) 197
BsaJI CCNNGG 3 cut(s) 111, 288, 922
BsaWI WCCGGW 1 cut(s) 206
BsaXI ACNNNNNCTCC 2 cut(s) 1890, 1920
Bsc4I CCNNNNNNNGG 1 cut(s) 738
Bse1I ACTGG 2 cut(s) 693, 1127
Bse3DI GCAATG 1 cut(s) 1954
BseBI CCWGG 1 cut(s) 924
BseCI ATCGAT 2 cut(s) 711, 1968
BseDI CCNNGG 3 cut(s) 111, 288, 922
BseGI GGATG 5 cut(s) 264, 754, 1467, 1585, 1770
BseLI CCNNNNNNNGG 1 cut(s) 738
BseMI GCAATG 1 cut(s) 1954
BseMII CTCAG 5 cut(s) 498, 990, 1842, 1866, 1956
BseNI ACTGG 2 cut(s) 693, 1127
BseRI GAGGAG 1 cut(s) 771
BseSI GKGCMC 2 cut(s) 312, 596
BseX3I CGGCCG 1 cut(s) 114
BseXI GCAGC 4 cut(s) 326, 341, 499, 628
BsgI GTGCAG 2 cut(s) 608, 1107
Bsh1236I CGCG 2 cut(s) 273, 808
Bsh1285I CGRYCG 1 cut(s) 117
BshFI GGCC 4 cut(s) 116, 231, 1116, 1816
BshVI ATCGAT 2 cut(s) 711, 1968
BsiEI CGRYCG 1 cut(s) 117
BsiHKAI GWGCWC 1 cut(s) 596
BsiHKCI CYCGRG 1 cut(s) 1347
BsiSI CCGG 2 cut(s) 113, 207
BslFI GGGAC 1 cut(s) 690
BslI CCNNNNNNNGG 1 cut(s) 738
BsmAI GTCTC 3 cut(s) 286, 395, 563
BsmBI CGTCTC 1 cut(s) 563
BsmFI GGGAC 1 cut(s) 690
BsmI GAATGC 1 cut(s) 1107
BsnI GGCC 4 cut(s) 116, 231, 1116, 1816
BsoBI CYCGRG 1 cut(s) 1347
Bsp119I TTCGAA 1 cut(s) 126
Bsp1286I GDGCHC 2 cut(s) 312, 596
Bsp1407I TGTACA 1 cut(s) 576
Bsp143I GATC 8 cut(s) 21, 48, 601, 708, 1486, 1611, 1723, 1918
Bsp1720I GCTNAGC 1 cut(s) 1106
Bsp68I TCGCGA 1 cut(s) 808
BspACI CCGC 3 cut(s) 225, 273, 1321
BspANI GGCC 4 cut(s) 116, 231, 1116, 1816
BspCNI CTCAG 5 cut(s) 499, 991, 1841, 1867, 1955
BspDI ATCGAT 2 cut(s) 711, 1968
BspFNI CGCG 2 cut(s) 273, 808
BspHI TCATGA 1 cut(s) 39
BspLI GGNNCC 3 cut(s) 667, 1539, 1725
BspMAI CTGCAG 1 cut(s) 646
BspOI GCTAGC 1 cut(s) 1413
BspPI GGATC 5 cut(s) 16, 609, 716, 1718, 1731
BspQI GCTCTTC 2 cut(s) 780, 882
BspT104I TTCGAA 1 cut(s) 126
BsrDI GCAATG 1 cut(s) 1954
BsrGI TGTACA 1 cut(s) 576
BsrI ACTGG 2 cut(s) 693, 1127
BssECI CCNNGG 3 cut(s) 111, 288, 922
BssMI GATC 8 cut(s) 21, 48, 601, 708, 1486, 1611, 1723, 1918
Bst2UI CCWGG 1 cut(s) 924
Bst4CI ACNGT 2 cut(s) 703, 1529
Bst6I CTCTTC 3 cut(s) 780, 882, 925
BstAPI GCANNNNNTGC 1 cut(s) 303
BstAUI TGTACA 1 cut(s) 576
BstBAI YACGTR 1 cut(s) 197
BstBI TTCGAA 1 cut(s) 126
BstC8I GCNNGC 6 cut(s) 229, 308, 383, 432, 596, 1411
BstDEI CTNAG 7 cut(s) 507, 999, 1106, 1382, 1828, 1875, 1942
BstEII GGTNACC 1 cut(s) 358
BstF5I GGATG 5 cut(s) 264, 754, 1467, 1585, 1770
BstFNI CGCG 2 cut(s) 273, 808
BstKTI GATC 8 cut(s) 24, 51, 604, 711, 1489, 1614, 1726, 1921
BstMAI GTCTC 3 cut(s) 286, 395, 563
BstMBI GATC 8 cut(s) 21, 48, 601, 708, 1486, 1611, 1723, 1918
BstMCI CGRYCG 1 cut(s) 117
BstMWI GCNNNNNNNGC 6 cut(s) 87, 303, 387, 595, 924, 1647
BstNI CCWGG 1 cut(s) 924
BstNSI RCATGY 1 cut(s) 385
BstPI GGTNACC 1 cut(s) 358
BstSCI CCNGG 2 cut(s) 111, 922
BstSFI CTRYAG 2 cut(s) 642, 816
BstSLI GKGCMC 2 cut(s) 312, 596
BstUI CGCG 2 cut(s) 273, 808
BstV1I GCAGC 4 cut(s) 326, 341, 499, 628
BstV2I GAAGAC 1 cut(s) 1576
BstX2I RGATCY 2 cut(s) 601, 1723
BstYI RGATCY 2 cut(s) 601, 1723
BstZI CGGCCG 1 cut(s) 114
Bsu15I ATCGAT 2 cut(s) 711, 1968
BsuI GTATCC 1 cut(s) 1895
BsuRI GGCC 4 cut(s) 116, 231, 1116, 1816
BsuTUI ATCGAT 2 cut(s) 711, 1968
BtgZI GCGATG 2 cut(s) 1125, 1631
BtsCI GGATG 5 cut(s) 264, 754, 1467, 1585, 1770
BtsI GCAGTG 2 cut(s) 216, 596
BtsIMutI CAGTG 3 cut(s) 216, 504, 596
BtuMI TCGCGA 1 cut(s) 808
Cac8I GCNNGC 6 cut(s) 229, 308, 383, 432, 596, 1411
CciI TCATGA 1 cut(s) 39
Cfr13I GGNCC 2 cut(s) 741, 895
ClaI ATCGAT 2 cut(s) 711, 1968
CpoI CGGWCCG 1 cut(s) 741
CseI GACGC 3 cut(s) 580, 755, 1916
Csp6I GTAC 8 cut(s) 198, 529, 577, 699, 789, 1521, 1598, 1768
CspI CGGWCCG 1 cut(s) 741
CviAII CATG 8 cut(s) 40, 382, 1327, 1367, 1435, 1534, 1822, 1916
CviQI GTAC 8 cut(s) 198, 529, 577, 699, 789, 1521, 1598, 1768
DdeI CTNAG 7 cut(s) 507, 999, 1106, 1382, 1828, 1875, 1942
DpnI GATC 8 cut(s) 23, 50, 603, 710, 1488, 1613, 1725, 1920
DpnII GATC 8 cut(s) 21, 48, 601, 708, 1486, 1611, 1723, 1918
DrdI GACNNNNNNGTC 1 cut(s) 1000
DseDI GACNNNNNNGTC 1 cut(s) 1000
EaeI YGGCCR 3 cut(s) 114, 229, 1114
EagI CGGCCG 1 cut(s) 114
Eam1104I CTCTTC 3 cut(s) 780, 882, 925
EarI CTCTTC 3 cut(s) 780, 882, 925
EclXI CGGCCG 1 cut(s) 114
Eco47I GGWCC 2 cut(s) 741, 895
Eco52I CGGCCG 1 cut(s) 114
Eco57I CTGAAG 4 cut(s) 61, 597, 1515, 1570
Eco88I CYCGRG 1 cut(s) 1347
Eco91I GGTNACC 1 cut(s) 358
EcoO65I GGTNACC 1 cut(s) 358
EcoRII CCWGG 1 cut(s) 922
Esp3I CGTCTC 1 cut(s) 563
FaeI CATG 8 cut(s) 43, 385, 1330, 1370, 1438, 1537, 1825, 1919
FalI AAGNNNNNCTT 2 cut(s) 818, 850
FaqI GGGAC 1 cut(s) 690
FatI CATG 8 cut(s) 39, 381, 1326, 1366, 1434, 1533, 1821, 1915
FauNDI CATATG 2 cut(s) 253, 365
FbaI TGATCA 2 cut(s) 1486, 1918
FblI GTMKAC 1 cut(s) 17
Fnu4HI GCNGC 5 cut(s) 330, 340, 513, 642, 1321
FokI GGATG 5 cut(s) 271, 741, 1474, 1592, 1757
Fsp4HI GCNGC 5 cut(s) 330, 340, 513, 642, 1321
FspBI CTAG 5 cut(s) 54, 786, 881, 1410, 1467
GluI GCNGC 5 cut(s) 330, 340, 513, 642, 1321
GsuI CTGGAG 1 cut(s) 1524
HaeIII GGCC 4 cut(s) 116, 231, 1116, 1816
HapII CCGG 2 cut(s) 113, 207
HgaI GACGC 3 cut(s) 580, 755, 1916
Hin1II CATG 8 cut(s) 43, 385, 1330, 1370, 1438, 1537, 1825, 1919
HincII GTYRAC 2 cut(s) 164, 1909
HindII GTYRAC 2 cut(s) 164, 1909
HindIII AAGCTT 1 cut(s) 1199
HinfI GANTC 6 cut(s) 128, 829, 1001, 1080, 1373, 1739
HpaII CCGG 2 cut(s) 113, 207
HphI GGTGA 2 cut(s) 100, 287
Hpy166II GTNNAC 6 cut(s) 18, 164, 497, 594, 1661, 1909
Hpy188I TCNGA 7 cut(s) 133, 616, 741, 1054, 1453, 1579, 1595
Hpy8I GTNNAC 6 cut(s) 18, 164, 497, 594, 1661, 1909
Hpy99I CGWCG 2 cut(s) 377, 749
HpyAV CCTTC 7 cut(s) 551, 1067, 1238, 1490, 1550, 1620, 1897
HpyCH4III ACNGT 2 cut(s) 703, 1529
HpyCH4IV ACGT 3 cut(s) 196, 625, 1905
HpyF10VI GCNNNNNNNGC 6 cut(s) 87, 303, 387, 595, 924, 1647
HpyF3I CTNAG 7 cut(s) 507, 999, 1106, 1382, 1828, 1875, 1942
HpySE526I ACGT 3 cut(s) 196, 625, 1905
Hsp92II CATG 8 cut(s) 43, 385, 1330, 1370, 1438, 1537, 1825, 1919
Ksp22I TGATCA 2 cut(s) 1486, 1918
Kzo9I GATC 8 cut(s) 21, 48, 601, 708, 1486, 1611, 1723, 1918
LguI GCTCTTC 2 cut(s) 780, 882
LmnI GCTCC 1 cut(s) 1543
Lsp1109I GCAGC 4 cut(s) 326, 341, 499, 628
LweI GCATC 3 cut(s) 304, 763, 1792
MaeI CTAG 5 cut(s) 54, 786, 881, 1410, 1467
MaeII ACGT 3 cut(s) 196, 625, 1905
MaeIII GTNAC 4 cut(s) 71, 358, 460, 1529
MalI GATC 8 cut(s) 23, 50, 603, 710, 1488, 1613, 1725, 1920
MboI GATC 8 cut(s) 21, 48, 601, 708, 1486, 1611, 1723, 1918
MfeI CAATTG 1 cut(s) 671
MflI RGATCY 2 cut(s) 601, 1723
MhlI GDGCHC 2 cut(s) 312, 596
MlsI TGGCCA 1 cut(s) 1116
MluNI TGGCCA 1 cut(s) 1116
MlyI GAGTC 1 cut(s) 1010
MmeI TCCRAC 3 cut(s) 156, 426, 1692
Mox20I TGGCCA 1 cut(s) 1116
MroXI GAANNNNTTC 2 cut(s) 66, 833
MscI TGGCCA 1 cut(s) 1116
MseI TTAA 5 cut(s) 456, 1095, 1173, 1733, 1844
Msp20I TGGCCA 1 cut(s) 1116
MspA1I CMGCKG 1 cut(s) 227
MspI CCGG 2 cut(s) 113, 207
MspR9I CCNGG 2 cut(s) 113, 924
MunI CAATTG 1 cut(s) 671
Mva1269I GAATGC 1 cut(s) 1107
MvaI CCWGG 1 cut(s) 924
MvnI CGCG 2 cut(s) 273, 808
MwoI GCNNNNNNNGC 6 cut(s) 87, 303, 387, 595, 924, 1647
NciI CCSGG 1 cut(s) 113
NdeI CATATG 2 cut(s) 253, 365
NdeII GATC 8 cut(s) 21, 48, 601, 708, 1486, 1611, 1723, 1918
NheI GCTAGC 1 cut(s) 1409
NlaIII CATG 8 cut(s) 43, 385, 1330, 1370, 1438, 1537, 1825, 1919
NlaIV GGNNCC 3 cut(s) 667, 1539, 1725
NruI TCGCGA 1 cut(s) 808
NspI RCATGY 1 cut(s) 385
NspV TTCGAA 1 cut(s) 126
PaeI GCATGC 1 cut(s) 385
PaeR7I CTCGAG 1 cut(s) 1347
PagI TCATGA 1 cut(s) 39
PciSI GCTCTTC 2 cut(s) 780, 882
PcsI WCGNNNNNNNCGW 1 cut(s) 438
PctI GAATGC 1 cut(s) 1107
PdmI GAANNNNTTC 2 cut(s) 66, 833
PfeI GAWTC 5 cut(s) 128, 829, 1080, 1373, 1739
PflFI GACNNNGTC 1 cut(s) 1822
PkrI GCNGC 5 cut(s) 331, 341, 514, 643, 1322
PleI GAGTC 1 cut(s) 1009
PpsI GAGTC 1 cut(s) 1009
Ppu21I YACGTR 1 cut(s) 197
Psp1406I AACGTT 1 cut(s) 625
Psp6I CCWGG 1 cut(s) 922
PspEI GGTNACC 1 cut(s) 358
PspGI CCWGG 1 cut(s) 922
PspN4I GGNNCC 3 cut(s) 667, 1539, 1725
PspPI GGNCC 2 cut(s) 741, 895
PspXI VCTCGAGB 1 cut(s) 1347
PstI CTGCAG 1 cut(s) 646
PsuI RGATCY 2 cut(s) 601, 1723
PsyI GACNNNGTC 1 cut(s) 1822
RruI TCGCGA 1 cut(s) 808
RsaI GTAC 8 cut(s) 199, 530, 578, 700, 790, 1522, 1599, 1769
RsaNI GTAC 8 cut(s) 198, 529, 577, 699, 789, 1521, 1598, 1768
Rsr2I CGGWCCG 1 cut(s) 741
RsrII CGGWCCG 1 cut(s) 741
SapI GCTCTTC 2 cut(s) 780, 882
SaqAI TTAA 5 cut(s) 456, 1095, 1173, 1733, 1844
SatI GCNGC 5 cut(s) 330, 340, 513, 642, 1321
Sau3AI GATC 8 cut(s) 21, 48, 601, 708, 1486, 1611, 1723, 1918
Sau96I GGNCC 2 cut(s) 741, 895
ScaI AGTACT 3 cut(s) 530, 790, 1599
SchI GAGTC 1 cut(s) 1010
ScrFI CCNGG 2 cut(s) 113, 924
SduI GDGCHC 2 cut(s) 312, 596
SfaNI GCATC 3 cut(s) 304, 763, 1792
SfcI CTRYAG 2 cut(s) 642, 816
Sfr274I CTCGAG 1 cut(s) 1347
SfuI TTCGAA 1 cut(s) 126
SinI GGWCC 2 cut(s) 741, 895
SlaI CTCGAG 1 cut(s) 1347
SmlI CTYRAG 3 cut(s) 1347, 1607, 1932
SmoI CTYRAG 3 cut(s) 1347, 1607, 1932
SphI GCATGC 1 cut(s) 385
SsiI CCGC 3 cut(s) 225, 273, 1321
SspMI CTAG 5 cut(s) 54, 786, 881, 1410, 1467
StyD4I CCNGG 2 cut(s) 111, 922
TaaI ACNGT 2 cut(s) 703, 1529
TaiI ACGT 3 cut(s) 199, 628, 1908
TaqI TCGA 9 cut(s) 126, 185, 372, 395, 416, 711, 1029, 1348, 1968
TaqII GACCGA 2 cut(s) 149, 758
TatI WGTACW 4 cut(s) 528, 576, 788, 1597
TauI GCSGC 1 cut(s) 1323
TfiI GAWTC 5 cut(s) 128, 829, 1080, 1373, 1739
Tru1I TTAA 5 cut(s) 456, 1095, 1173, 1733, 1844
Tru9I TTAA 5 cut(s) 456, 1095, 1173, 1733, 1844
TscAI CASTG 3 cut(s) 223, 511, 596
TseI GCWGC 4 cut(s) 329, 339, 512, 641
TspDTI ATGAA 8 cut(s) 434, 648, 1284, 1383, 1451, 1634, 1713, 1770
TspRI CASTG 3 cut(s) 223, 511, 596
Tth111I GACNNNGTC 1 cut(s) 1822
VneI GTGCAC 1 cut(s) 592
VpaK11BI GGWCC 2 cut(s) 741, 895
XapI RAATTY 4 cut(s) 802, 1169, 1353, 1757
XceI RCATGY 1 cut(s) 385
XhoI CTCGAG 1 cut(s) 1347
XmiI GTMKAC 1 cut(s) 17
XmnI GAANNNNTTC 2 cut(s) 66, 833
XspI CTAG 5 cut(s) 54, 786, 881, 1410, 1467
ZrmI AGTACT 3 cut(s) 530, 790, 1599
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.