Rmu_sc0000079.1_g000015

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000079.1
Physical Location & Seq
Reverse (-)
46926 .. 48348
1423 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000079.1_g000015.1.cds

Sequence Viewer

Length: 1047 bp
atgtcgatcctctattttctttacacgctgagctcgctttgcttgagcagtactgtagcgtatggtaaatacctccaccatttctgcccaaacaccaccactttcaccgcaaaatcctccttccaaccccatcgcgatcaactgctgcggacccttgtctctaacgccacccgtgacaatggcttttactatgcctctgctggcggccaaatctcaaacgagaccgtcaacggactcttcctctgccgcggtgacctgtccaaagatgcttgcagtgactgcgtattcgctgtagcctctgatgttgtgaaacgctgcccaatcgagaaaaaggctattatatggtatgactactgcatgatacgctactctaactattcattcttttctattgatgaggactcgcctttccacttccagtggaactggaacgaggagaatgttaggcaggagggggatgcatttgcagcatcctttaactacgtagtgagaaatactatgaagcttttagtacaacaggttgccagcgccacaaaaaagtttgcgaccaaagaatcgtacaccaaaatgttatttggacagccgttctacagccttggacagtgcacgcaggatctgtccactgcagattgcaatagctgtcttactagagccacagaaaaccttcagagtatgaatgctacaggaaaacaaggggcgcttcttctatcaccaagttgtaatatgaggttcgatttggaacccttttacaccgctctacctccgccccccttcgtagtatcccctcctccgccacccttggtagtatcccctccaccggccccggtagcactgccaacacttggaggaaaaagtaaattctcatccaaagtcattgttagtattcttgctcctgttgctctttgtgtgctagttgtggttctggccggattctattttggcaagagactcagcagagcaaaacgacaaaagacaaaggcggaagaccaataccagcttgtgatgaaaaggaggccattgctgaagaacaagaatttctggaaataa

Protein Analysis

348

Amino Acids

38.98

Weight (kDa)

9.22

Isoelectric Point (pI)

58.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 842
AccBSI CCGCTC 1 cut(s) 755
AccII CGCG 2 cut(s) 135, 249
AciI CCGC 9 cut(s) 108, 148, 204, 247, 249, 753, 764, 791, 980
AclWI GGATC 1 cut(s) 621
AcoI YGGCCR 2 cut(s) 205, 924
AcsI RAATTY 2 cut(s) 857, 1033
AcuI CTGAAG 2 cut(s) 650, 1043
AfaI GTAC 3 cut(s) 52, 513, 560
AfiI CCNNNNNNNGG 2 cut(s) 817, 842
AluBI AGCT 4 cut(s) 33, 505, 639, 997
AluI AGCT 4 cut(s) 33, 505, 639, 997
Alw21I GWGCWC 2 cut(s) 35, 608
Alw26I GTCTC 3 cut(s) 163, 215, 940
Alw44I GTGCAC 1 cut(s) 604
AlwI GGATC 1 cut(s) 621
AlwNI CAGNNNCTG 2 cut(s) 279, 616
AoxI GGCC 4 cut(s) 205, 819, 924, 1013
ApaLI GTGCAC 1 cut(s) 604
ApeKI GCWGC 3 cut(s) 145, 315, 467
ApoI RAATTY 2 cut(s) 857, 1033
ArsI GACNNNNNNTTYG 2 cut(s) 269, 301
Asp700I GAANNNNTTC 1 cut(s) 663
AspLEI GCGC 2 cut(s) 530, 700
AspS9I GGNCC 2 cut(s) 150, 820
AsuC2I CCSGG 1 cut(s) 824
AsuHPI GGTGA 3 cut(s) 97, 263, 702
AvaII GGWCC 1 cut(s) 150
BaeGI GKGCMC 1 cut(s) 608
BanII GRGCYC 1 cut(s) 35
BbsI GAAGAC 1 cut(s) 990
Bbv12I GWGCWC 2 cut(s) 35, 608
BbvI GCAGC 3 cut(s) 132, 302, 479
BccI CCATC 1 cut(s) 138
BceAI ACGGC 1 cut(s) 568
BciVI GTATCC 2 cut(s) 790, 817
BcnI CCSGG 1 cut(s) 824
BcoDI GTCTC 3 cut(s) 163, 215, 940
BfaI CTAG 2 cut(s) 648, 911
BfmI CTRYAG 5 cut(s) 54, 291, 589, 624, 681
BfoI RGCGCY 2 cut(s) 531, 701
BfuI GTATCC 2 cut(s) 790, 817
BisI GCNGC 5 cut(s) 146, 205, 247, 316, 468
BlpI GCTNAGC 1 cut(s) 29
BlsI GCNGC 5 cut(s) 147, 206, 248, 317, 469
BmcAI AGTACT 1 cut(s) 52
Bme1390I CCNGG 1 cut(s) 824
Bme18I GGWCC 1 cut(s) 150
BmgT120I GGNCC 2 cut(s) 150, 820
BmiI GGNNCC 3 cut(s) 152, 741, 822
BmrFI CCNGG 1 cut(s) 824
BmsI GCATC 3 cut(s) 256, 448, 479
BoxI GACNNNNGTC 1 cut(s) 155
BpiI GAAGAC 1 cut(s) 990
Bpu1102I GCTNAGC 1 cut(s) 29
BpuEI CTTGAG 1 cut(s) 64
BpuMI CCSGG 1 cut(s) 824
BsaAI YACGTR 1 cut(s) 484
BsaI GGTCTC 1 cut(s) 215
BsaJI CCNNGG 4 cut(s) 247, 595, 798, 822
Bsc4I CCNNNNNNNGG 2 cut(s) 817, 842
Bse118I RCCGGY 1 cut(s) 817
Bse1I ACTGG 2 cut(s) 418, 431
Bse3DI GCAATG 1 cut(s) 1016
BseDI CCNNGG 4 cut(s) 247, 595, 798, 822
BseGI GGATG 3 cut(s) 463, 470, 863
BseLI CCNNNNNNNGG 2 cut(s) 817, 842
BseMI GCAATG 1 cut(s) 1016
BseMII CTCAG 2 cut(s) 20, 964
BseNI ACTGG 2 cut(s) 418, 431
BseRI GAGGAG 2 cut(s) 449, 777
BseSI GKGCMC 1 cut(s) 608
BseXI GCAGC 3 cut(s) 132, 302, 479
Bsh1236I CGCG 2 cut(s) 135, 249
BshFI GGCC 4 cut(s) 207, 821, 926, 1015
BsiHKAI GWGCWC 2 cut(s) 35, 608
BsiSI CCGG 3 cut(s) 818, 824, 927
BslI CCNNNNNNNGG 2 cut(s) 817, 842
BsmAI GTCTC 3 cut(s) 163, 215, 940
BsmI GAATGC 1 cut(s) 682
BsnI GGCC 4 cut(s) 207, 821, 926, 1015
Bso31I GGTCTC 1 cut(s) 215
Bsp1286I GDGCHC 2 cut(s) 35, 608
Bsp143I GATC 3 cut(s) 6, 136, 613
Bsp1720I GCTNAGC 1 cut(s) 29
Bsp68I TCGCGA 1 cut(s) 135
BspACI CCGC 9 cut(s) 108, 148, 204, 247, 249, 753, 764, 791, 980
BspANI GGCC 4 cut(s) 207, 821, 926, 1015
BspCNI CTCAG 2 cut(s) 21, 963
BspFNI CGCG 2 cut(s) 135, 249
BspLI GGNNCC 3 cut(s) 152, 741, 822
BspMAI CTGCAG 1 cut(s) 628
BspPI GGATC 1 cut(s) 621
BspTNI GGTCTC 1 cut(s) 215
BsrBI CCGCTC 1 cut(s) 755
BsrDI GCAATG 1 cut(s) 1016
BsrFI RCCGGY 1 cut(s) 817
BsrI ACTGG 2 cut(s) 418, 431
BssAI RCCGGY 1 cut(s) 817
BssECI CCNNGG 4 cut(s) 247, 595, 798, 822
BssMI GATC 3 cut(s) 6, 136, 613
BssT1I CCWWGG 2 cut(s) 595, 798
Bst4CI ACNGT 3 cut(s) 55, 226, 603
Bst6I CTCTTC 1 cut(s) 242
BstAPI GCANNNNNTGC 1 cut(s) 279
BstBAI YACGTR 1 cut(s) 484
BstC8I GCNNGC 5 cut(s) 35, 202, 271, 526, 608
BstDEI CTNAG 2 cut(s) 29, 950
BstDSI CCRYGG 1 cut(s) 247
BstEII GGTNACC 1 cut(s) 251
BstF5I GGATG 3 cut(s) 463, 470, 863
BstFNI CGCG 2 cut(s) 135, 249
BstH2I RGCGCY 2 cut(s) 531, 701
BstHHI GCGC 2 cut(s) 530, 700
BstKTI GATC 3 cut(s) 9, 139, 616
BstMAI GTCTC 3 cut(s) 163, 215, 940
BstMBI GATC 3 cut(s) 6, 136, 613
BstMWI GCNNNNNNNGC 7 cut(s) 34, 39, 279, 363, 467, 827, 896
BstPAI GACNNNNGTC 1 cut(s) 155
BstPI GGTNACC 1 cut(s) 251
BstSCI CCNGG 1 cut(s) 822
BstSFI CTRYAG 5 cut(s) 54, 291, 589, 624, 681
BstSLI GKGCMC 1 cut(s) 608
BstSNI TACGTA 1 cut(s) 484
BstUI CGCG 2 cut(s) 135, 249
BstV1I GCAGC 3 cut(s) 132, 302, 479
BstV2I GAAGAC 1 cut(s) 990
BstX2I RGATCY 1 cut(s) 613
BstYI RGATCY 1 cut(s) 613
BsuI GTATCC 2 cut(s) 790, 817
BsuRI GGCC 4 cut(s) 207, 821, 926, 1015
BtgI CCRYGG 1 cut(s) 247
BtgZI GCGATG 1 cut(s) 116
BtsCI GGATG 3 cut(s) 463, 470, 863
BtsI GCAGTG 3 cut(s) 280, 621, 830
BtsIMutI CAGTG 5 cut(s) 280, 425, 608, 621, 830
BtuMI TCGCGA 1 cut(s) 135
Cac8I GCNNGC 5 cut(s) 35, 202, 271, 526, 608
CaiI CAGNNNCTG 2 cut(s) 279, 616
CfoI GCGC 2 cut(s) 530, 700
Cfr10I RCCGGY 1 cut(s) 817
Cfr13I GGNCC 2 cut(s) 150, 820
Cfr42I CCGCGG 1 cut(s) 250
Csp6I GTAC 3 cut(s) 51, 512, 559
CviAII CATG 1 cut(s) 358
CviQI GTAC 3 cut(s) 51, 512, 559
DdeI CTNAG 2 cut(s) 29, 950
DpnI GATC 3 cut(s) 8, 138, 615
DpnII GATC 3 cut(s) 6, 136, 613
EaeI YGGCCR 2 cut(s) 205, 924
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
EciI GGCGGA 3 cut(s) 753, 780, 995
Ecl136II GAGCTC 1 cut(s) 33
Eco105I TACGTA 1 cut(s) 484
Eco130I CCWWGG 2 cut(s) 595, 798
Eco24I GRGCYC 1 cut(s) 35
Eco31I GGTCTC 1 cut(s) 215
Eco47I GGWCC 1 cut(s) 150
Eco53kI GAGCTC 1 cut(s) 33
Eco57I CTGAAG 2 cut(s) 650, 1043
Eco91I GGTNACC 1 cut(s) 251
EcoICRI GAGCTC 1 cut(s) 33
EcoO65I GGTNACC 1 cut(s) 251
EcoT14I CCWWGG 2 cut(s) 595, 798
EcoT22I ATGCAT 1 cut(s) 463
EcoT38I GRGCYC 1 cut(s) 35
ErhI CCWWGG 2 cut(s) 595, 798
FaeI CATG 1 cut(s) 361
FaiI YATR 9 cut(s) 63, 192, 341, 343, 348, 359, 500, 674, 725
FalI AAGNNNNNCTT 2 cut(s) 684, 716
FatI CATG 1 cut(s) 357
Fnu4HI GCNGC 5 cut(s) 146, 205, 247, 316, 468
FokI GGATG 3 cut(s) 457, 470, 850
FriOI GRGCYC 1 cut(s) 35
Fsp4HI GCNGC 5 cut(s) 146, 205, 247, 316, 468
FspBI CTAG 2 cut(s) 648, 911
GlaI GCGC 2 cut(s) 529, 699
GluI GCNGC 5 cut(s) 146, 205, 247, 316, 468
HaeII RGCGCY 2 cut(s) 531, 701
HaeIII GGCC 4 cut(s) 207, 821, 926, 1015
HapII CCGG 3 cut(s) 818, 824, 927
HhaI GCGC 2 cut(s) 530, 700
Hin1II CATG 1 cut(s) 361
Hin6I GCGC 2 cut(s) 528, 698
HinP1I GCGC 2 cut(s) 528, 698
HincII GTYRAC 1 cut(s) 229
HindII GTYRAC 1 cut(s) 229
HindIII AAGCTT 1 cut(s) 503
HinfI GANTC 5 cut(s) 234, 401, 554, 930, 948
HpaII CCGG 3 cut(s) 818, 824, 927
HphI GGTGA 3 cut(s) 97, 263, 702
Hpy166II GTNNAC 4 cut(s) 229, 561, 606, 621
Hpy188I TCNGA 2 cut(s) 301, 669
Hpy188III TCNNGA 3 cut(s) 134, 325, 1039
Hpy8I GTNNAC 4 cut(s) 229, 561, 606, 621
HpyAV CCTTC 3 cut(s) 130, 674, 781
HpyCH4III ACNGT 3 cut(s) 55, 226, 603
HpyCH4IV ACGT 1 cut(s) 483
HpyCH4V TGCA 7 cut(s) 273, 357, 461, 467, 606, 626, 633
HpyF10VI GCNNNNNNNGC 7 cut(s) 34, 39, 279, 363, 467, 827, 896
HpyF3I CTNAG 2 cut(s) 29, 950
HpySE526I ACGT 1 cut(s) 483
Hsp92II CATG 1 cut(s) 361
HspAI GCGC 2 cut(s) 528, 698
KspI CCGCGG 1 cut(s) 250
Kzo9I GATC 3 cut(s) 6, 136, 613
LmnI GCTCC 1 cut(s) 895
Lsp1109I GCAGC 3 cut(s) 132, 302, 479
LweI GCATC 3 cut(s) 256, 448, 479
MaeI CTAG 2 cut(s) 648, 911
MaeII ACGT 1 cut(s) 483
MaeIII GTNAC 3 cut(s) 173, 251, 275
MalI GATC 3 cut(s) 8, 138, 615
MbiI CCGCTC 1 cut(s) 755
MboI GATC 3 cut(s) 6, 136, 613
MboII GAAGA 4 cut(s) 229, 695, 995, 1036
MflI RGATCY 1 cut(s) 613
MhlI GDGCHC 2 cut(s) 35, 608
MluCI AATT 2 cut(s) 857, 1033
MlyI GAGTC 3 cut(s) 228, 395, 942
MmeI TCCRAC 1 cut(s) 148
Mph1103I ATGCAT 1 cut(s) 463
MroXI GAANNNNTTC 1 cut(s) 663
MseI TTAA 1 cut(s) 477
MslI CAYNNNNRTG 1 cut(s) 566
MspA1I CMGCKG 1 cut(s) 249
MspI CCGG 3 cut(s) 818, 824, 927
MspR9I CCNGG 1 cut(s) 824
Mva1269I GAATGC 1 cut(s) 682
MvnI CGCG 2 cut(s) 135, 249
MwoI GCNNNNNNNGC 7 cut(s) 34, 39, 279, 363, 467, 827, 896
NciI CCSGG 1 cut(s) 824
NdeII GATC 3 cut(s) 6, 136, 613
NlaIII CATG 1 cut(s) 361
NlaIV GGNNCC 3 cut(s) 152, 741, 822
NmuCI GTSAC 3 cut(s) 173, 251, 275
NruI TCGCGA 1 cut(s) 135
NsiI ATGCAT 1 cut(s) 463
PctI GAATGC 1 cut(s) 682
PdmI GAANNNNTTC 1 cut(s) 663
PfeI GAWTC 2 cut(s) 554, 930
PflMI CCANNNNNTGG 1 cut(s) 842
PkrI GCNGC 5 cut(s) 147, 206, 248, 317, 469
PleI GAGTC 3 cut(s) 228, 395, 942
PpsI GAGTC 3 cut(s) 228, 395, 942
Ppu21I YACGTR 1 cut(s) 484
PshAI GACNNNNGTC 1 cut(s) 155
Psp124BI GAGCTC 1 cut(s) 35
PspEI GGTNACC 1 cut(s) 251
PspN4I GGNNCC 3 cut(s) 152, 741, 822
PspPI GGNCC 2 cut(s) 150, 820
PstI CTGCAG 1 cut(s) 628
PstNI CAGNNNCTG 2 cut(s) 279, 616
PsuI RGATCY 1 cut(s) 613
RruI TCGCGA 1 cut(s) 135
RsaI GTAC 3 cut(s) 52, 513, 560
RsaNI GTAC 3 cut(s) 51, 512, 559
RseI CAYNNNNRTG 1 cut(s) 566
SacI GAGCTC 1 cut(s) 35
SacII CCGCGG 1 cut(s) 250
SaqAI TTAA 1 cut(s) 477
SatI GCNGC 5 cut(s) 146, 205, 247, 316, 468
Sau3AI GATC 3 cut(s) 6, 136, 613
Sau96I GGNCC 2 cut(s) 150, 820
ScaI AGTACT 1 cut(s) 52
SchI GAGTC 3 cut(s) 228, 395, 942
ScrFI CCNGG 1 cut(s) 824
SduI GDGCHC 2 cut(s) 35, 608
SfaNI GCATC 3 cut(s) 256, 448, 479
SfcI CTRYAG 5 cut(s) 54, 291, 589, 624, 681
Sfr303I CCGCGG 1 cut(s) 250
SgrBI CCGCGG 1 cut(s) 250
SinI GGWCC 1 cut(s) 150
SmiMI CAYNNNNRTG 1 cut(s) 566
SmlI CTYRAG 1 cut(s) 43
SmoI CTYRAG 1 cut(s) 43
SnaBI TACGTA 1 cut(s) 484
Sse9I AATT 2 cut(s) 857, 1033
SsiI CCGC 9 cut(s) 108, 148, 204, 247, 249, 753, 764, 791, 980
SspMI CTAG 2 cut(s) 648, 911
SstI GAGCTC 1 cut(s) 35
StyD4I CCNGG 1 cut(s) 822
StyI CCWWGG 2 cut(s) 595, 798
TaaI ACNGT 3 cut(s) 55, 226, 603
TaiI ACGT 1 cut(s) 486
TaqI TCGA 3 cut(s) 5, 324, 732
TasI AATT 2 cut(s) 857, 1033
TatI WGTACW 2 cut(s) 50, 511
TauI GCSGC 2 cut(s) 207, 249
TfiI GAWTC 2 cut(s) 554, 930
Tru1I TTAA 1 cut(s) 477
Tru9I TTAA 1 cut(s) 477
TscAI CASTG 5 cut(s) 280, 425, 608, 628, 837
TseFI GTSAC 3 cut(s) 173, 251, 275
TseI GCWGC 3 cut(s) 145, 315, 467
Tsp45I GTSAC 3 cut(s) 173, 251, 275
TspDTI ATGAA 4 cut(s) 369, 515, 689, 1019
TspGWI ACGGA 1 cut(s) 246
TspRI CASTG 5 cut(s) 280, 425, 608, 628, 837
Van91I CCANNNNNTGG 1 cut(s) 842
VneI GTGCAC 1 cut(s) 604
VpaK11BI GGWCC 1 cut(s) 150
XapI RAATTY 2 cut(s) 857, 1033
XmnI GAANNNNTTC 1 cut(s) 663
XspI CTAG 2 cut(s) 648, 911
ZrmI AGTACT 1 cut(s) 52
Zsp2I ATGCAT 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.