Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr5

Orthogroup ID

OG0000699

Physical Location & Seq

Genomic Coordinates Forward (+)

3539280 .. 3542474

Gene Structure 3195 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw5G003650.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2004 bp

ATGGCAGAAGTGGTCCTTCTTTTCCTTTCAATGGTTACCCTGCTCGGCTTTCCCACTACAAAAGCCGTCTACCTCTACCACGTCTGCCCAAATACCACCGTCTTCACCCCAAACTCCACCTTTCAAACCTATCGCACCCAATTGCTGTCTTCCCTTGTCTCTAATGCCACCCGTAAGGACCGCTTTTACCAGACCACTGCTGGCGGCAAGATCTCAACAGAGACCGTGAAGGGCCTCTTCCTCTGCCGCGGTGACGTGTTCACAGACGCTTGCGAAGACTGCGTGGATACCGCGGCCTCAGAGGTTGTCCAAAGGTGTCCCGTCGAGAAACAGGTTGTCATATGGTACGACGAATGCATGGTACGCTACTCTAACCAGTCATTTCTTTCTACCGGGGCTCAGTCACCTGGGGTGTACATGTGGAACATAGCGAATCTGACGCAGGTTGAAGATAATAGAACAGCCCAATTTAACCAGGTTTTAACAAATACCACGAATAAGCTAGTCGGAGAGGTTATCAACGTCGCTGAAAAGTTTGCAACCCAAGAAGCAATTTTTACAGATTTTACTACGCTGTACACCCTCGGACAGTGCACGCAGGATCTGTCCACCGCAGATTGCGAGGTCTGTCTTAGAGAAGCCATAGCACAACTTCAGTCTTGTTGTAGTGGAAAACAAGGGGGAAGAGTTCTGTATCCAAGTTGTAATATTAGGTACGAGGTGTACCCCTTCTATTCAACACAGGACGATATGCCTCCTCCGCCAGCCCCTGTAGCACCTCCTCCTGCAGCCCCTGTAGCACCTCCTCCGCCAGCCCCGGTGGCAACGGTACGTAAAGGAAAAAATAAACTCTCATCCATAGTCATTCCTAGCATTCTTGCTCCCGTTGCTTTCTGTGTGCTAGTTGTGGTTGTGGCCAGATGTTTCATTCGCAAATTAAAAAGAGCCAAAGGACAACAAAATGAAGCCGAAAATGATATGACAACTGTTGAATCCTTGCAATTTGACTTGGGAACTATCGAAGCTGCCACGAAAAAGTTTTCTGCCGATAACATGTTAGGTGAAGGCGGATTTGGTCAAGTTTTCAAGGGAACACTTGATAATGGACAAGAAATAGCTGTGAAGAGGCTGTCAAAAAGCTCTGGACAAGGTGTACGAGAGTTTAAGAACGAGGTTTTATTGGTAGCAAAGCTTCAACACAGGAATCTCGTAAAGCTACTAGGGTTTTGCTTGGGAGGAGAAGAAACACTACTTGTCTATGAATATGTGCCCAACAAAAGTCTTGATTATTTTCTATTTGAAGCCAAAAAAAGAGAACAACTGGATTGGTCAAGACGCTGCACCATAATAGGGGGAATCGCTCGAGGAATCCTCTATCTTCATGAAGATTCTAGGCTTCGAGTTATACATCGTGATTTGAAAGCTAGCAATATCTTGTTGGATGCCAGTATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTTGGAGTTGATGATCAAACGCAAGGAAGCACAAGAAGAATTGTTGGCACTTATGGTTACATGGCTCCAGAATATGCTATGGAGGGATTGTATTCTGTAAAATCTGATGTCTTCAGCTTCGGAATACTCTTGCTTGAGATCCTAACGGGAAGAAAGAACTTTTTAGGCTTTCATCCCACATCTTCTGCACCGACTCTTCTCAGTCTTGCTTGGCAGTTATGGAACGAAGGAAAAGTGTTGGAGTTGATGGATCCATTGCTGAAAGATTCATGCAATCTAAAGGAGTTATTGAGATACATCCACATTGGAATGTTGTGTGTTCAAGAAGACGCAAACAATAGGCCAACCATGTCGTCGGTTGTTCTAATGTTAAAGAGTGAAAGTATCTGCCTTTCCAAACCTGAGCGACCTGCCTTCTTTACAGGAAGATCTATCAATGATCACTGCCATACATTAGGGGATTTACTTAGTTGCTCTGTCAATGGTTTGACGATTTCTGATGATATCCCACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

667

Amino Acids

73.89

Weight (kDa)

6.72

Isoelectric Point (pI)

45.34

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	29 - 126	4.7e-24	Salt stress response/antifungal
Stress-antifung	PF01657	152 - 241	3.1e-12	Salt stress response/antifungal
Pkinase	PF00069	349 - 615	3.3e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	350 - 617	2.5e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61750
fragaria_vesca	FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica	MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica	Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis	pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis	RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata	RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora	Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii	Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa	Rorug06G0063800
rosa_samantha	Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana	Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	433, 1906
AccI	GTMKAC	1 cut(s)	69
AccII	CGCG	2 cut(s)	249, 293
AclWI	GGATC	4 cut(s)	609, 1621, 1733, 1746
AcoI	YGGCCR	1 cut(s)	915
AcsI	RAATTY	1 cut(s)	1461
AcuI	CTGAAG	2 cut(s)	638, 1585
AfaI	GTAC	8 cut(s)	347, 363, 416, 578, 716, 725, 831, 1155
AfiI	CCNNNNNNNGG	2 cut(s)	31, 1350
AflIII	ACRYGT	3 cut(s)	255, 417, 1053
AjiI	CACGTC	2 cut(s)	82, 256
AjnI	CCWGG	2 cut(s)	406, 474
AjuI	GAANNNNNNNTTGG	2 cut(s)	1056, 1088
AluBI	AGCT	8 cut(s)	502, 1025, 1118, 1140, 1192, 1216, 1424, 1605
AluI	AGCT	8 cut(s)	502, 1025, 1118, 1140, 1192, 1216, 1424, 1605
Alw21I	GWGCWC	1 cut(s)	596
Alw26I	GTCTC	2 cut(s)	163, 215
Alw44I	GTGCAC	1 cut(s)	592
AlwI	GGATC	4 cut(s)	609, 1621, 1733, 1746
AlwNI	CAGNNNCTG	3 cut(s)	604, 770, 794
Ama87I	CYCGRG	1 cut(s)	1362
AoxI	GGCC	4 cut(s)	232, 294, 915, 1829
ApaLI	GTGCAC	1 cut(s)	592
ApeKI	GCWGC	3 cut(s)	788, 1025, 1338
ApoI	RAATTY	1 cut(s)	1461
AspS9I	GGNCC	3 cut(s)	13, 178, 232
AsuC2I	CCSGG	2 cut(s)	394, 818
AsuHPI	GGTGA	4 cut(s)	97, 263, 396, 1073
AsuNHI	GCTAGC	1 cut(s)	1424
AvaI	CYCGRG	1 cut(s)	1362
AvaII	GGWCC	2 cut(s)	13, 178
BaeGI	GKGCMC	2 cut(s)	596, 1272
BalI	TGGCCA	1 cut(s)	917
BamHI	GGATCC	1 cut(s)	1738
BanII	GRGCYC	1 cut(s)	400
BarI	GAAGNNNNNNTAC	4 cut(s)	1176, 1208, 1233, 1265
BbsI	GAAGAC	5 cut(s)	94, 141, 282, 1591, 1821
Bbv12I	GWGCWC	1 cut(s)	596
BbvI	GCAGC	3 cut(s)	800, 1012, 1325
BccI	CCATC	1 cut(s)	1729
BceAI	ACGGC	1 cut(s)	50
BciT130I	CCWGG	2 cut(s)	408, 476
BciVI	GTATCC	2 cut(s)	280, 705
BclI	TGATCA	2 cut(s)	1501, 1927
BcnI	CCSGG	2 cut(s)	394, 818
BcoDI	GTCTC	2 cut(s)	163, 215
BfaI	CTAG	6 cut(s)	503, 870, 902, 1220, 1392, 1425
BfmI	CTRYAG	3 cut(s)	771, 786, 795
BfuAI	ACCTGC	2 cut(s)	433, 1906
BfuI	GTATCC	2 cut(s)	280, 705
BglI	GCCNNNNNGGC	1 cut(s)	821
BglII	AGATCT	2 cut(s)	210, 1916
BisI	GCNGC	6 cut(s)	205, 247, 294, 789, 1026, 1339
BlsI	GCNGC	6 cut(s)	206, 248, 295, 790, 1027, 1340
Bme1390I	CCNGG	4 cut(s)	394, 408, 476, 818
Bme18I	GGWCC	2 cut(s)	13, 178
BmeT110I	CYCGRG	1 cut(s)	1362
BmgBI	CACGTC	2 cut(s)	82, 256
BmgT120I	GGNCC	3 cut(s)	13, 178, 232
BmiI	GGNNCC	2 cut(s)	1554, 1740
BmrFI	CCNGG	4 cut(s)	394, 408, 476, 818
BmsI	GCATC	1 cut(s)	1432
BmtI	GCTAGC	1 cut(s)	1428
BpiI	GAAGAC	5 cut(s)	94, 141, 282, 1591, 1821
BplI	GAGNNNNNCTC	2 cut(s)	1356, 1388
BpmI	CTGGAG	1 cut(s)	1539
Bpu10I	CCTNAGC	1 cut(s)	1890
BpuEI	CTTGAG	1 cut(s)	1643
BpuMI	CCSGG	2 cut(s)	394, 818
BsaAI	YACGTR	1 cut(s)	833
BsaI	GGTCTC	1 cut(s)	215
BsaJI	CCNNGG	6 cut(s)	247, 291, 393, 407, 583, 816
BsaXI	ACNNNNNCTCC	2 cut(s)	1562, 1592
Bsc4I	CCNNNNNNNGG	2 cut(s)	31, 1350
Bse1I	ACTGG	3 cut(s)	376, 1326, 1446
Bse3DI	GCAATG	1 cut(s)	1742
BseBI	CCWGG	2 cut(s)	408, 476
BseDI	CCNNGG	6 cut(s)	247, 291, 393, 407, 583, 816
BseGI	GGATG	4 cut(s)	854, 1447, 1660, 1785
BseLI	CCNNNNNNNGG	2 cut(s)	31, 1350
BseMI	GCAATG	1 cut(s)	1742
BseMII	CTCAG	4 cut(s)	312, 413, 1702, 1881
BseNI	ACTGG	3 cut(s)	376, 1326, 1446
BseRI	GAGGAG	4 cut(s)	747, 771, 795, 1251
BseSI	GKGCMC	2 cut(s)	596, 1272
BseXI	GCAGC	3 cut(s)	800, 1012, 1325
BsgI	GTGCAG	2 cut(s)	1324, 1659
Bsh1236I	CGCG	2 cut(s)	249, 293
BshFI	GGCC	4 cut(s)	234, 296, 917, 1831
BsiHKAI	GWGCWC	1 cut(s)	596
BsiHKCI	CYCGRG	1 cut(s)	1362
BsiSI	CCGG	2 cut(s)	393, 818
BslFI	GGGAC	1 cut(s)	303
BslI	CCNNNNNNNGG	2 cut(s)	31, 1350
BsmAI	GTCTC	2 cut(s)	163, 215
BsmFI	GGGAC	1 cut(s)	303
BsmI	GAATGC	2 cut(s)	359, 873
BsnI	GGCC	4 cut(s)	234, 296, 917, 1831
Bso31I	GGTCTC	1 cut(s)	215
BsoBI	CYCGRG	1 cut(s)	1362
Bsp1286I	GDGCHC	3 cut(s)	400, 596, 1272
Bsp1407I	TGTACA	2 cut(s)	414, 576
Bsp143I	GATC	7 cut(s)	210, 601, 1501, 1626, 1738, 1916, 1927
BspANI	GGCC	4 cut(s)	234, 296, 917, 1831
BspCNI	CTCAG	4 cut(s)	311, 412, 1701, 1882
BspFNI	CGCG	2 cut(s)	249, 293
BspHI	TCATGA	1 cut(s)	1381
BspLI	GGNNCC	2 cut(s)	1554, 1740
BspMAI	CTGCAG	1 cut(s)	790
BspMI	ACCTGC	2 cut(s)	433, 1906
BspOI	GCTAGC	1 cut(s)	1428
BspPI	GGATC	4 cut(s)	609, 1621, 1733, 1746
BspTNI	GGTCTC	1 cut(s)	215
BsrDI	GCAATG	1 cut(s)	1742
BsrGI	TGTACA	2 cut(s)	414, 576
BsrI	ACTGG	3 cut(s)	376, 1326, 1446
BssECI	CCNNGG	6 cut(s)	247, 291, 393, 407, 583, 816
BssMI	GATC	7 cut(s)	210, 601, 1501, 1626, 1738, 1916, 1927
Bst2UI	CCWGG	2 cut(s)	408, 476
Bst4CI	ACNGT	5 cut(s)	100, 226, 591, 829, 988
Bst6I	CTCTTC	4 cut(s)	242, 679, 1118, 1689
BstAUI	TGTACA	2 cut(s)	414, 576
BstBAI	YACGTR	1 cut(s)	833
BstC8I	GCNNGC	6 cut(s)	202, 271, 596, 765, 813, 1426
BstDEI	CTNAG	6 cut(s)	298, 399, 632, 1688, 1890, 1955
BstDSI	CCRYGG	2 cut(s)	247, 291
BstEII	GGTNACC	1 cut(s)	34
BstF5I	GGATG	4 cut(s)	854, 1447, 1660, 1785
BstFNI	CGCG	2 cut(s)	249, 293
BstKTI	GATC	7 cut(s)	213, 604, 1504, 1629, 1741, 1919, 1930
BstMAI	GTCTC	2 cut(s)	163, 215
BstMBI	GATC	7 cut(s)	210, 601, 1501, 1626, 1738, 1916, 1927
BstMWI	GCNNNNNNNGC	7 cut(s)	279, 363, 760, 773, 797, 821, 887
BstNI	CCWGG	2 cut(s)	408, 476
BstNSI	RCATGY	2 cut(s)	421, 1057
BstPI	GGTNACC	1 cut(s)	34
BstSCI	CCNGG	4 cut(s)	392, 406, 474, 816
BstSFI	CTRYAG	3 cut(s)	771, 786, 795
BstSLI	GKGCMC	2 cut(s)	596, 1272
BstSNI	TACGTA	1 cut(s)	833
BstUI	CGCG	2 cut(s)	249, 293
BstV1I	GCAGC	3 cut(s)	800, 1012, 1325
BstV2I	GAAGAC	5 cut(s)	94, 141, 282, 1591, 1821
BstX2I	RGATCY	5 cut(s)	210, 601, 1626, 1738, 1916
BstYI	RGATCY	5 cut(s)	210, 601, 1626, 1738, 1916
BsuI	GTATCC	2 cut(s)	280, 705
BsuRI	GGCC	4 cut(s)	234, 296, 917, 1831
BtgI	CCRYGG	2 cut(s)	247, 291
BtrI	CACGTC	2 cut(s)	82, 256
BtsCI	GGATG	4 cut(s)	854, 1447, 1660, 1785
BtsI	GCAGTG	2 cut(s)	195, 1930
BtsIMutI	CAGTG	3 cut(s)	195, 596, 1930
BveI	ACCTGC	2 cut(s)	433, 1906
Cac8I	GCNNGC	6 cut(s)	202, 271, 596, 765, 813, 1426
CaiI	CAGNNNCTG	3 cut(s)	604, 770, 794
CciI	TCATGA	1 cut(s)	1381
Cfr13I	GGNCC	3 cut(s)	13, 178, 232
Cfr42I	CCGCGG	2 cut(s)	250, 294
CseI	GACGC	4 cut(s)	275, 448, 1344, 1826
CsiI	ACCWGGT	1 cut(s)	474
Csp6I	GTAC	8 cut(s)	346, 362, 415, 577, 715, 724, 830, 1154
CviAII	CATG	7 cut(s)	358, 418, 1054, 1382, 1549, 1758, 1837
CviQI	GTAC	8 cut(s)	346, 362, 415, 577, 715, 724, 830, 1154
DdeI	CTNAG	6 cut(s)	298, 399, 632, 1688, 1890, 1955
DpnI	GATC	7 cut(s)	212, 603, 1503, 1628, 1740, 1918, 1929
DpnII	GATC	7 cut(s)	210, 601, 1501, 1626, 1738, 1916, 1927
EaeI	YGGCCR	1 cut(s)	915
Eam1104I	CTCTTC	4 cut(s)	242, 679, 1118, 1689
EarI	CTCTTC	4 cut(s)	242, 679, 1118, 1689
EciI	GGCGGA	3 cut(s)	750, 798, 1083
Eco105I	TACGTA	1 cut(s)	833
Eco24I	GRGCYC	1 cut(s)	400
Eco31I	GGTCTC	1 cut(s)	215
Eco32I	GATATC	1 cut(s)	1993
Eco47I	GGWCC	2 cut(s)	13, 178
Eco57I	CTGAAG	2 cut(s)	638, 1585
Eco88I	CYCGRG	1 cut(s)	1362
Eco91I	GGTNACC	1 cut(s)	34
EcoO109I	RGGNCCY	1 cut(s)	232
EcoO65I	GGTNACC	1 cut(s)	34
EcoRII	CCWGG	2 cut(s)	406, 474
EcoRV	GATATC	1 cut(s)	1993
EcoT22I	ATGCAT	1 cut(s)	359
EcoT38I	GRGCYC	1 cut(s)	400
FaeI	CATG	7 cut(s)	361, 421, 1057, 1385, 1552, 1761, 1840
FalI	AAGNNNNNCTT	5 cut(s)	32, 167, 199, 221, 253
FaqI	GGGAC	1 cut(s)	303
FatI	CATG	7 cut(s)	357, 417, 1053, 1381, 1548, 1757, 1836
FauNDI	CATATG	1 cut(s)	341
FbaI	TGATCA	2 cut(s)	1501, 1927
FblI	GTMKAC	1 cut(s)	69
Fnu4HI	GCNGC	6 cut(s)	205, 247, 294, 789, 1026, 1339
FokI	GGATG	4 cut(s)	841, 1454, 1647, 1772
FriOI	GRGCYC	1 cut(s)	400
Fsp4HI	GCNGC	6 cut(s)	205, 247, 294, 789, 1026, 1339
FspBI	CTAG	6 cut(s)	503, 870, 902, 1220, 1392, 1425
GluI	GCNGC	6 cut(s)	205, 247, 294, 789, 1026, 1339
GsuI	CTGGAG	1 cut(s)	1539
HaeIII	GGCC	4 cut(s)	234, 296, 917, 1831
HapII	CCGG	2 cut(s)	393, 818
HgaI	GACGC	4 cut(s)	275, 448, 1344, 1826
Hin1II	CATG	7 cut(s)	361, 421, 1057, 1385, 1552, 1761, 1840
HindIII	AAGCTT	1 cut(s)	1190
HinfI	GANTC	9 cut(s)	433, 992, 1204, 1356, 1368, 1388, 1453, 1681, 1754
HpaII	CCGG	2 cut(s)	393, 818
HphI	GGTGA	4 cut(s)	97, 263, 396, 1073
Hpy166II	GTNNAC	8 cut(s)	70, 261, 415, 579, 594, 609, 724, 1154
Hpy188I	TCNGA	8 cut(s)	301, 438, 509, 587, 1468, 1594, 1610, 1987
Hpy188III	TCNNGA	8 cut(s)	325, 1143, 1283, 1332, 1382, 1412, 1556, 1811
Hpy8I	GTNNAC	8 cut(s)	70, 261, 415, 579, 594, 609, 724, 1154
Hpy99I	CGWCG	4 cut(s)	326, 353, 527, 1846
HpyAV	CCTTC	6 cut(s)	26, 223, 739, 1058, 1709, 1912
HpyCH4III	ACNGT	5 cut(s)	100, 226, 591, 829, 988
HpyCH4IV	ACGT	4 cut(s)	81, 255, 522, 832
HpyCH4V	TGCA	8 cut(s)	357, 539, 594, 788, 1000, 1341, 1676, 1761
HpyF10VI	GCNNNNNNNGC	7 cut(s)	279, 363, 760, 773, 797, 821, 887
HpyF3I	CTNAG	6 cut(s)	298, 399, 632, 1688, 1890, 1955
HpySE526I	ACGT	4 cut(s)	81, 255, 522, 832
Hsp92II	CATG	7 cut(s)	361, 421, 1057, 1385, 1552, 1761, 1840
Ksp22I	TGATCA	2 cut(s)	1501, 1927
KspI	CCGCGG	2 cut(s)	250, 294
Kzo9I	GATC	7 cut(s)	210, 601, 1501, 1626, 1738, 1916, 1927
LmnI	GCTCC	2 cut(s)	886, 1558
Lsp1109I	GCAGC	3 cut(s)	800, 1012, 1325
LweI	GCATC	1 cut(s)	1432
MabI	ACCWGGT	1 cut(s)	474
MaeI	CTAG	6 cut(s)	503, 870, 902, 1220, 1392, 1425
MaeII	ACGT	4 cut(s)	81, 255, 522, 832
MaeIII	GTNAC	4 cut(s)	34, 251, 402, 1544
MalI	GATC	7 cut(s)	212, 603, 1503, 1628, 1740, 1918, 1929
MboI	GATC	7 cut(s)	210, 601, 1501, 1626, 1738, 1916, 1927
MfeI	CAATTG	1 cut(s)	140
MflI	RGATCY	5 cut(s)	210, 601, 1626, 1738, 1916
MhlI	GDGCHC	3 cut(s)	400, 596, 1272
MlsI	TGGCCA	1 cut(s)	917
MluCI	AATT	7 cut(s)	140, 467, 552, 935, 1001, 1461, 1527
MluNI	TGGCCA	1 cut(s)	917
MlyI	GAGTC	1 cut(s)	1675
MmeI	TCCRAC	3 cut(s)	487, 1419, 1707
Mox20I	TGGCCA	1 cut(s)	917
Mph1103I	ATGCAT	1 cut(s)	359
MscI	TGGCCA	1 cut(s)	917
MseI	TTAA	5 cut(s)	471, 482, 938, 1164, 1859
MslI	CAYNNNNRTG	1 cut(s)	1796
Msp20I	TGGCCA	1 cut(s)	917
MspA1I	CMGCKG	2 cut(s)	249, 293
MspI	CCGG	2 cut(s)	393, 818
MspR9I	CCNGG	4 cut(s)	394, 408, 476, 818
MunI	CAATTG	1 cut(s)	140
Mva1269I	GAATGC	2 cut(s)	359, 873
MvaI	CCWGG	2 cut(s)	408, 476
MvnI	CGCG	2 cut(s)	249, 293
MwoI	GCNNNNNNNGC	7 cut(s)	279, 363, 760, 773, 797, 821, 887
NciI	CCSGG	2 cut(s)	394, 818
NdeI	CATATG	1 cut(s)	341
NdeII	GATC	7 cut(s)	210, 601, 1501, 1626, 1738, 1916, 1927
NheI	GCTAGC	1 cut(s)	1424
NlaIII	CATG	7 cut(s)	361, 421, 1057, 1385, 1552, 1761, 1840
NlaIV	GGNNCC	2 cut(s)	1554, 1740
NmeAIII	GCCGAG	1 cut(s)	24
NmuCI	GTSAC	2 cut(s)	251, 402
NsiI	ATGCAT	1 cut(s)	359
NspI	RCATGY	2 cut(s)	421, 1057
PaeR7I	CTCGAG	1 cut(s)	1362
PagI	TCATGA	1 cut(s)	1381
PciI	ACATGT	2 cut(s)	417, 1053
PctI	GAATGC	2 cut(s)	359, 873
PfeI	GAWTC	8 cut(s)	433, 992, 1204, 1356, 1368, 1388, 1453, 1754
PkrI	GCNGC	6 cut(s)	206, 248, 295, 790, 1027, 1340
PleI	GAGTC	1 cut(s)	1675
PpsI	GAGTC	1 cut(s)	1675
Ppu21I	YACGTR	1 cut(s)	833
PscI	ACATGT	2 cut(s)	417, 1053
Psp6I	CCWGG	2 cut(s)	406, 474
PspEI	GGTNACC	1 cut(s)	34
PspGI	CCWGG	2 cut(s)	406, 474
PspN4I	GGNNCC	2 cut(s)	1554, 1740
PspPI	GGNCC	3 cut(s)	13, 178, 232
PspXI	VCTCGAGB	1 cut(s)	1362
PstI	CTGCAG	1 cut(s)	790
PstNI	CAGNNNCTG	3 cut(s)	604, 770, 794
PsuI	RGATCY	5 cut(s)	210, 601, 1626, 1738, 1916
RsaI	GTAC	8 cut(s)	347, 363, 416, 578, 716, 725, 831, 1155
RsaNI	GTAC	8 cut(s)	346, 362, 415, 577, 715, 724, 830, 1154
RseI	CAYNNNNRTG	1 cut(s)	1796
SacII	CCGCGG	2 cut(s)	250, 294
SaqAI	TTAA	5 cut(s)	471, 482, 938, 1164, 1859
SatI	GCNGC	6 cut(s)	205, 247, 294, 789, 1026, 1339
Sau3AI	GATC	7 cut(s)	210, 601, 1501, 1626, 1738, 1916, 1927
Sau96I	GGNCC	3 cut(s)	13, 178, 232
SchI	GAGTC	1 cut(s)	1675
ScrFI	CCNGG	4 cut(s)	394, 408, 476, 818
SduI	GDGCHC	3 cut(s)	400, 596, 1272
SexAI	ACCWGGT	1 cut(s)	474
SfaNI	GCATC	1 cut(s)	1432
SfcI	CTRYAG	3 cut(s)	771, 786, 795
Sfr274I	CTCGAG	1 cut(s)	1362
Sfr303I	CCGCGG	2 cut(s)	250, 294
SgrBI	CCGCGG	2 cut(s)	250, 294
SinI	GGWCC	2 cut(s)	13, 178
SlaI	CTCGAG	1 cut(s)	1362
SmiMI	CAYNNNNRTG	1 cut(s)	1796
SmlI	CTYRAG	2 cut(s)	1362, 1622
SmoI	CTYRAG	2 cut(s)	1362, 1622
SnaBI	TACGTA	1 cut(s)	833
Sse9I	AATT	7 cut(s)	140, 467, 552, 935, 1001, 1461, 1527
SspI	AATATT	1 cut(s)	709
SspMI	CTAG	6 cut(s)	503, 870, 902, 1220, 1392, 1425
StyD4I	CCNGG	4 cut(s)	392, 406, 474, 816
TaaI	ACNGT	5 cut(s)	100, 226, 591, 829, 988
TaiI	ACGT	4 cut(s)	84, 258, 525, 835
TaqI	TCGA	4 cut(s)	324, 1020, 1363, 1399
TasI	AATT	7 cut(s)	140, 467, 552, 935, 1001, 1461, 1527
TatI	WGTACW	2 cut(s)	414, 576
TauI	GCSGC	3 cut(s)	207, 249, 296
TfiI	GAWTC	8 cut(s)	433, 992, 1204, 1356, 1368, 1388, 1453, 1754
Tru1I	TTAA	5 cut(s)	471, 482, 938, 1164, 1859
Tru9I	TTAA	5 cut(s)	471, 482, 938, 1164, 1859
TscAI	CASTG	3 cut(s)	202, 596, 1937
TseFI	GTSAC	2 cut(s)	251, 402
TseI	GCWGC	3 cut(s)	788, 1025, 1338
Tsp45I	GTSAC	2 cut(s)	251, 402
TspDTI	ATGAA	8 cut(s)	916, 978, 1275, 1370, 1398, 1466, 1649, 1746
TspRI	CASTG	3 cut(s)	202, 596, 1937
VneI	GTGCAC	1 cut(s)	592
VpaK11BI	GGWCC	2 cut(s)	13, 178
XapI	RAATTY	1 cut(s)	1461
XceI	RCATGY	2 cut(s)	421, 1057
XcmI	CCANNNNNNNNNTGG	1 cut(s)	197
XhoI	CTCGAG	1 cut(s)	1362
XmiI	GTMKAC	1 cut(s)	69
XspI	CTAG	6 cut(s)	503, 870, 902, 1220, 1392, 1425
Zsp2I	ATGCAT	1 cut(s)	359

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.