MD05G1340400.v1.1

transmembrane receptor protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr05
OG0000699
Physical Location & Seq
Reverse (-)
46098590 .. 46103169
4580 bp
Loading structure...
UTR
Exon/CDS
Intron
MD05G1340400.v1.1.491

Sequence Viewer

Length: 1842 bp
ATGCATGGTTGTTCAGGTAGAGGATGGTGGATCACAATCTTTACGGTTGTGTCAGCATGTCTAGCCATACTGTGCCTGCACTTGGGGCTCTTCCTCCTCCGCCTCCGCCTAAAGAAGGGGGAGACGACGAGGAATATGTCTACGATCCTTTTTCTGTTTCTCATGAGTTTGATCACTAGTAGTGACAGTAGGGAAGCACTTTGTTGGTCCGTCGCCTGCCCAGACAATACCACTTCCACCCTCGCCGAAGCAGTCGAATCGAACCCCGATAGCTACCCATATAATCTCGTTCAGCTTCTCCAATCCCTTTCCTTGAACGCCACACATACTGACACCGGCTTTTACACTACCACCGCTGGCCGAAGCACAACTGAACAGGCCTATGGGATGTTTCTATGTCGCGGTGATGTCTCTACCGACGTTTGCAGAGAGTGCATGACCTTCGCAAACCTGGAGGCAGTACAACTCTGCCTTGATGGAACAGATGCTATGATATGGAACGACGAGTGCATGGTACGCTACTCAAATAAGAAATTAGTTTTCTCCATGAACGAGTCGTCTTCCCATGGCCAATTCTACGGGTCTACTGAAAAAGAACCAAGCGGATATAGCCAGGTATTGGCAACTAGTGTGCATGAGCTAACCACTGAGGCTGCCAATAACAGCAAGTACTTTGCAACCAAAGAAGCCAAAGTTAAAGGGTCAAATGAGACGGTGTACAGCCTTGCGCAGTGCACGCAAGACATCTCCGCTTCAAATTGCAAACGGTGTCTAGCAAGAGCTGCAGAAAAAATATTAGTTCAATCCGAATTCCGAGGGAGACAAGTCCTATATCCCAGTTGTAGTATTCGGTTGGATAATACCCTCTTTTACGCCATCAATTGGACCCACGCACAGCATCCTCCCACGCCAGAGGCTCTTCCTCCTCCGAGTACTCTACTACCAAATTTGCGATTACCTATAGTTGTCTCTCTGGTCCTTGTAGCATTGGGCTACTGCCTCCCGGGCAGAAGAGAAAGAAAGAAGAACGATGAGGCTCTACAACAAGAAAATGGCAAACGGCAAGATATGAGGACGGCTGAGTCCTTGCAATTTGATTTGGGAACTCTCGAAACTGCCACAAATAAGTTTTCCGAAGATAACAAGTTAGGCGAAGGTGGATTCGGTGCAGTTTTTAAGGGAATGCTTATTAATGGACAAGAAATAGCAGTAAAGAGGTTGTCAAAAAGCTCCGGACAAGGTGTACAAGAATTTAAGAATGAGGTTGTATTGGTAGCCAAGCTTCAACACAGAAATCTTGTCAGGCTTTTAGGTTTTTGCTTGGAAGGAGAAGAAACCTTACTTGTTTATGAATGTGTGCCCAACAAAAGCCTTGATTATTTTCTATTTGAACATAAAAAACGAGAACAACTAGATTGGTTGAGCCGCACCATGATAATCGGAGGAATTGCTCGAGGAATTTTGTATCTCCATGAAGATTCGAGGCTTAGAGTTATACATCGTGATTTGAAAGTTAGCAACATTTTATTAGACAACAATATGAACCCGAAAATATCAGATTTTGGGATGGCTAGAATGTTTGGAGTTGATGATCAAACTGAAGGAAATACCAAAAGAATTGTTGGCACTTATGGTTACATGGCTCCAGAATATGCTATGGAAGGATTGTATTCAGTAAAATCGGATGTCTTCAGCTTCGGAGTACTTCTGCTTGAGATCATAACGGGGAGAAGGAACTTTTTAGGCTTTCATCGCACTAATTGTGGGCCTACTCTTATAGGTTATGCTTGGCAATTATGGAATGAAACGAAAGGTTTGGAGTTGATGGATCCCTTGTTATAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
Pkinase_Tyr Stress-antifung

Protein Analysis

614

Amino Acids

68.64

Weight (kDa)

6.49

Isoelectric Point (pI)

46.35

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 87 - 177 7.5e-20 Salt stress response/antifungal
Stress-antifung PF01657 197 - 287 1.5e-11 Salt stress response/antifungal
Pkinase PF00069 378 - 581 4.3e-44 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 380 - 582 1.3e-45 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1840
AasI GACNNNNNNGTC 1 cut(s) 1081
Acc16I TGCGCA 1 cut(s) 729
AccB7I CCANNNNNTGG 2 cut(s) 619, 882
AccI GTMKAC 2 cut(s) 140, 584
AccII CGCG 1 cut(s) 402
AccIII TCCGGA 1 cut(s) 1232
AciI CCGC 7 cut(s) 100, 106, 354, 402, 603, 750, 1426
AclWI GGATC 4 cut(s) 38, 139, 1823, 1836
AcoI YGGCCR 2 cut(s) 358, 568
AcsI RAATTY 4 cut(s) 809, 946, 1250, 1458
AcuI CTGAAG 2 cut(s) 1620, 1675
AfaI GTAC 7 cut(s) 462, 516, 671, 719, 934, 1245, 1704
AfiI CCNNNNNNNGG 4 cut(s) 82, 115, 619, 882
AgsI TTSAA 6 cut(s) 316, 756, 803, 1286, 1391, 1510
AhlI ACTAGT 2 cut(s) 176, 626
AjnI CCWGG 2 cut(s) 450, 612
AluBI AGCT 7 cut(s) 273, 295, 640, 782, 1230, 1282, 1695
AluI AGCT 7 cut(s) 273, 295, 640, 782, 1230, 1282, 1695
Alw21I GWGCWC 1 cut(s) 737
Alw26I GTCTC 5 cut(s) 116, 415, 704, 814, 973
Alw44I GTGCAC 1 cut(s) 733
AlwI GGATC 4 cut(s) 38, 139, 1823, 1836
Ama87I CYCGRG 2 cut(s) 1003, 1452
Aor13HI TCCGGA 1 cut(s) 1232
AoxI GGCC 4 cut(s) 358, 378, 568, 1766
ApaLI GTGCAC 1 cut(s) 733
ApeKI GCWGC 2 cut(s) 653, 782
ApoI RAATTY 4 cut(s) 809, 946, 1250, 1458
AseI ATTAAT 1 cut(s) 1191
AspLEI GCGC 1 cut(s) 730
AspS9I GGNCC 4 cut(s) 207, 885, 976, 1766
AsuC2I CCSGG 2 cut(s) 1004, 1005
AsuHPI GGTGA 1 cut(s) 416
AvaI CYCGRG 2 cut(s) 1003, 1452
AvaII GGWCC 3 cut(s) 207, 885, 976
BaeGI GKGCMC 2 cut(s) 737, 1362
BalI TGGCCA 1 cut(s) 570
BamHI GGATCC 1 cut(s) 1828
BanII GRGCYC 1 cut(s) 90
BarI GAAGNNNNNNTAC 4 cut(s) 1266, 1298, 1323, 1355
BbsI GAAGAC 2 cut(s) 552, 1681
Bbv12I GWGCWC 1 cut(s) 737
BbvI GCAGC 2 cut(s) 640, 769
BccI CCATC 5 cut(s) 18, 470, 884, 1561, 1819
BceAI ACGGC 2 cut(s) 1076, 1092
BcgI CGANNNNNNTGC 4 cut(s) 240, 274, 424, 458
BciT130I CCWGG 2 cut(s) 452, 614
BclI TGATCA 2 cut(s) 171, 1591
BcnI CCSGG 2 cut(s) 1004, 1005
BcoDI GTCTC 5 cut(s) 116, 415, 704, 814, 973
BcuI ACTAGT 2 cut(s) 176, 626
BfaI CTAG 6 cut(s) 62, 177, 627, 773, 1412, 1572
BfmI CTRYAG 2 cut(s) 783, 960
BglI GCCNNNNNGGC 1 cut(s) 1005
BisI GCNGC 3 cut(s) 654, 783, 1426
BlsI GCNGC 3 cut(s) 655, 784, 1427
BmcAI AGTACT 3 cut(s) 671, 934, 1704
Bme1390I CCNGG 4 cut(s) 452, 614, 1004, 1005
Bme18I GGWCC 3 cut(s) 207, 885, 976
BmeT110I CYCGRG 2 cut(s) 1003, 1452
BmgT120I GGNCC 4 cut(s) 207, 885, 976, 1766
BmiI GGNNCC 3 cut(s) 887, 1644, 1830
BmrFI CCNGG 4 cut(s) 452, 614, 1004, 1005
BmrI ACTGGG 1 cut(s) 831
BmsI GCATC 2 cut(s) 475, 907
BmuI ACTGGG 1 cut(s) 831
BpiI GAAGAC 2 cut(s) 552, 1681
BpmI CTGGAG 2 cut(s) 473, 1629
BpuEI CTTGAG 1 cut(s) 1733
BpuMI CCSGG 2 cut(s) 1004, 1005
BsaBI GATNNNNATC 1 cut(s) 35
BsaJI CCNNGG 3 cut(s) 565, 814, 1003
BsaWI WCCGGW 1 cut(s) 1232
Bsc4I CCNNNNNNNGG 4 cut(s) 82, 115, 619, 882
Bse118I RCCGGY 1 cut(s) 335
Bse1I ACTGG 1 cut(s) 837
Bse8I GATNNNNATC 1 cut(s) 35
BseAI TCCGGA 1 cut(s) 1232
BseBI CCWGG 2 cut(s) 452, 614
BseDI CCNNGG 3 cut(s) 565, 814, 1003
BseGI GGATG 5 cut(s) 29, 393, 898, 1572, 1690
BseJI GATNNNNATC 1 cut(s) 35
BseLI CCNNNNNNNGG 4 cut(s) 82, 115, 619, 882
BseMII CTCAG 2 cut(s) 639, 1071
BseNI ACTGG 1 cut(s) 837
BseRI GAGGAG 2 cut(s) 86, 915
BseSI GKGCMC 2 cut(s) 737, 1362
BseXI GCAGC 2 cut(s) 640, 769
BsgI GTGCAG 2 cut(s) 62, 1188
Bsh1236I CGCG 1 cut(s) 402
BshFI GGCC 4 cut(s) 360, 380, 570, 1768
BsiHKAI GWGCWC 1 cut(s) 737
BsiHKCI CYCGRG 2 cut(s) 1003, 1452
BsiSI CCGG 3 cut(s) 336, 1004, 1233
BslI CCNNNNNNNGG 4 cut(s) 82, 115, 619, 882
BsmAI GTCTC 5 cut(s) 116, 415, 704, 814, 973
BsmBI CGTCTC 2 cut(s) 116, 704
BsmI GAATGC 1 cut(s) 1188
BsnI GGCC 4 cut(s) 360, 380, 570, 1768
BsoBI CYCGRG 2 cut(s) 1003, 1452
Bsp1286I GDGCHC 3 cut(s) 90, 737, 1362
Bsp13I TCCGGA 1 cut(s) 1232
Bsp1407I TGTACA 2 cut(s) 717, 1243
Bsp143I GATC 6 cut(s) 30, 144, 171, 1591, 1716, 1828
Bsp19I CCATGG 1 cut(s) 565
BspACI CCGC 7 cut(s) 100, 106, 354, 402, 603, 750, 1426
BspANI GGCC 4 cut(s) 360, 380, 570, 1768
BspCNI CTCAG 2 cut(s) 640, 1072
BspEI TCCGGA 1 cut(s) 1232
BspFNI CGCG 1 cut(s) 402
BspHI TCATGA 1 cut(s) 162
BspLI GGNNCC 3 cut(s) 887, 1644, 1830
BspMAI CTGCAG 1 cut(s) 787
BspPI GGATC 4 cut(s) 38, 139, 1823, 1836
BspQI GCTCTTC 2 cut(s) 95, 924
BsrFI RCCGGY 1 cut(s) 335
BsrGI TGTACA 2 cut(s) 717, 1243
BsrI ACTGG 1 cut(s) 837
BssAI RCCGGY 1 cut(s) 335
BssECI CCNNGG 3 cut(s) 565, 814, 1003
BssMI GATC 6 cut(s) 30, 144, 171, 1591, 1716, 1828
BssT1I CCWWGG 1 cut(s) 565
Bst2UI CCWGG 2 cut(s) 452, 614
Bst4CI ACNGT 5 cut(s) 46, 72, 188, 715, 768
Bst6I CTCTTC 3 cut(s) 95, 924, 1006
BstAPI GCANNNNNTGC 2 cut(s) 432, 782
BstAUI TGTACA 2 cut(s) 717, 1243
BstC8I GCNNGC 4 cut(s) 77, 217, 358, 737
BstDEI CTNAG 3 cut(s) 648, 1080, 1487
BstDSI CCRYGG 1 cut(s) 565
BstENI CCTNNNNNAGG 1 cut(s) 113
BstF5I GGATG 5 cut(s) 29, 393, 898, 1572, 1690
BstFNI CGCG 1 cut(s) 402
BstHHI GCGC 1 cut(s) 730
BstKTI GATC 6 cut(s) 33, 147, 174, 1594, 1719, 1831
BstMAI GTCTC 5 cut(s) 116, 415, 704, 814, 973
BstMBI GATC 6 cut(s) 30, 144, 171, 1591, 1716, 1828
BstMWI GCNNNNNNNGC 9 cut(s) 62, 85, 432, 516, 609, 736, 782, 1005, 1752
BstNI CCWGG 2 cut(s) 452, 614
BstNSI RCATGY 1 cut(s) 60
BstSCI CCNGG 4 cut(s) 450, 612, 1002, 1003
BstSFI CTRYAG 2 cut(s) 783, 960
BstSLI GKGCMC 2 cut(s) 737, 1362
BstUI CGCG 1 cut(s) 402
BstV1I GCAGC 2 cut(s) 640, 769
BstV2I GAAGAC 2 cut(s) 552, 1681
BstX2I RGATCY 1 cut(s) 1828
BstYI RGATCY 1 cut(s) 1828
BsuRI GGCC 4 cut(s) 360, 380, 570, 1768
BtgI CCRYGG 1 cut(s) 565
BtgZI GCGATG 1 cut(s) 1736
BtsCI GGATG 5 cut(s) 29, 393, 898, 1572, 1690
BtsI GCAGTG 1 cut(s) 737
BtsIMutI CAGTG 2 cut(s) 645, 737
Cac8I GCNNGC 4 cut(s) 77, 217, 358, 737
CciI TCATGA 1 cut(s) 162
CfoI GCGC 1 cut(s) 730
Cfr10I RCCGGY 1 cut(s) 335
Cfr13I GGNCC 4 cut(s) 207, 885, 976, 1766
Cfr9I CCCGGG 1 cut(s) 1003
Csp6I GTAC 7 cut(s) 461, 515, 670, 718, 933, 1244, 1703
CviQI GTAC 7 cut(s) 461, 515, 670, 718, 933, 1244, 1703
DdeI CTNAG 3 cut(s) 648, 1080, 1487
DpnI GATC 6 cut(s) 32, 146, 173, 1593, 1718, 1830
DpnII GATC 6 cut(s) 30, 144, 171, 1591, 1716, 1828
DrdI GACNNNNNNGTC 1 cut(s) 1081
DseDI GACNNNNNNGTC 1 cut(s) 1081
EaeI YGGCCR 2 cut(s) 358, 568
Eam1104I CTCTTC 3 cut(s) 95, 924, 1006
EarI CTCTTC 3 cut(s) 95, 924, 1006
EciI GGCGGA 2 cut(s) 89, 95
Eco130I CCWWGG 1 cut(s) 565
Eco147I AGGCCT 1 cut(s) 380
Eco24I GRGCYC 1 cut(s) 90
Eco47I GGWCC 3 cut(s) 207, 885, 976
Eco57I CTGAAG 2 cut(s) 1620, 1675
Eco88I CYCGRG 2 cut(s) 1003, 1452
EcoNI CCTNNNNNAGG 1 cut(s) 113
EcoRI GAATTC 1 cut(s) 809
EcoRII CCWGG 2 cut(s) 450, 612
EcoT14I CCWWGG 1 cut(s) 565
EcoT22I ATGCAT 1 cut(s) 6
EcoT38I GRGCYC 1 cut(s) 90
ErhI CCWWGG 1 cut(s) 565
Esp3I CGTCTC 2 cut(s) 116, 704
FbaI TGATCA 2 cut(s) 171, 1591
FblI GTMKAC 2 cut(s) 140, 584
Fnu4HI GCNGC 3 cut(s) 654, 783, 1426
FokI GGATG 5 cut(s) 36, 400, 885, 1579, 1697
FriOI GRGCYC 1 cut(s) 90
Fsp4HI GCNGC 3 cut(s) 654, 783, 1426
FspBI CTAG 6 cut(s) 62, 177, 627, 773, 1412, 1572
FspI TGCGCA 1 cut(s) 729
GlaI GCGC 1 cut(s) 729
GluI GCNGC 3 cut(s) 654, 783, 1426
GsuI CTGGAG 2 cut(s) 473, 1629
HaeIII GGCC 4 cut(s) 360, 380, 570, 1768
HapII CCGG 3 cut(s) 336, 1004, 1233
HhaI GCGC 1 cut(s) 730
Hin6I GCGC 1 cut(s) 728
HinP1I GCGC 1 cut(s) 728
HindIII AAGCTT 1 cut(s) 1280
HinfI GANTC 5 cut(s) 257, 554, 1082, 1161, 1478
HpaII CCGG 3 cut(s) 336, 1004, 1233
HphI GGTGA 1 cut(s) 416
Hpy166II GTNNAC 5 cut(s) 141, 585, 718, 735, 1244
Hpy188I TCNGA 8 cut(s) 808, 815, 930, 1135, 1442, 1558, 1684, 1700
Hpy188III TCNNGA 5 cut(s) 163, 1109, 1233, 1502, 1646
Hpy8I GTNNAC 5 cut(s) 141, 585, 718, 735, 1244
Hpy99I CGWCG 4 cut(s) 130, 215, 422, 506
HpyAV CCTTC 7 cut(s) 109, 451, 1148, 1319, 1595, 1655, 1725
HpyCH4III ACNGT 5 cut(s) 46, 72, 188, 715, 768
HpyCH4IV ACGT 1 cut(s) 420
HpyF10VI GCNNNNNNNGC 9 cut(s) 62, 85, 432, 516, 609, 736, 782, 1005, 1752
HpyF3I CTNAG 3 cut(s) 648, 1080, 1487
HpySE526I ACGT 1 cut(s) 420
HspAI GCGC 1 cut(s) 728
Kpn2I TCCGGA 1 cut(s) 1232
Ksp22I TGATCA 2 cut(s) 171, 1591
Kzo9I GATC 6 cut(s) 30, 144, 171, 1591, 1716, 1828
LguI GCTCTTC 2 cut(s) 95, 924
LmnI GCTCC 2 cut(s) 1235, 1648
Lsp1109I GCAGC 2 cut(s) 640, 769
LweI GCATC 2 cut(s) 475, 907
MaeI CTAG 6 cut(s) 62, 177, 627, 773, 1412, 1572
MaeII ACGT 1 cut(s) 420
MaeIII GTNAC 2 cut(s) 182, 1634
MalI GATC 6 cut(s) 32, 146, 173, 1593, 1718, 1830
MboI GATC 6 cut(s) 30, 144, 171, 1591, 1716, 1828
MboII GAAGA 9 cut(s) 82, 552, 911, 1023, 1036, 1148, 1343, 1487, 1681
MfeI CAATTG 1 cut(s) 880
MflI RGATCY 1 cut(s) 1828
MhlI GDGCHC 3 cut(s) 90, 737, 1362
MlsI TGGCCA 1 cut(s) 570
MluNI TGGCCA 1 cut(s) 570
MlyI GAGTC 2 cut(s) 563, 1091
MmeI TCCRAC 1 cut(s) 834
Mox20I TGGCCA 1 cut(s) 570
Mph1103I ATGCAT 1 cut(s) 6
MroI TCCGGA 1 cut(s) 1232
MscI TGGCCA 1 cut(s) 570
MseI TTAA 4 cut(s) 696, 1176, 1191, 1254
Msp20I TGGCCA 1 cut(s) 570
MspA1I CMGCKG 1 cut(s) 356
MspI CCGG 3 cut(s) 336, 1004, 1233
MspR9I CCNGG 4 cut(s) 452, 614, 1004, 1005
MunI CAATTG 1 cut(s) 880
Mva1269I GAATGC 1 cut(s) 1188
MvaI CCWGG 2 cut(s) 452, 614
MvnI CGCG 1 cut(s) 402
MwoI GCNNNNNNNGC 9 cut(s) 62, 85, 432, 516, 609, 736, 782, 1005, 1752
NciI CCSGG 2 cut(s) 1004, 1005
NcoI CCATGG 1 cut(s) 565
NdeII GATC 6 cut(s) 30, 144, 171, 1591, 1716, 1828
NlaIV GGNNCC 3 cut(s) 887, 1644, 1830
NmuCI GTSAC 1 cut(s) 182
NsbI TGCGCA 1 cut(s) 729
NsiI ATGCAT 1 cut(s) 6
NspI RCATGY 1 cut(s) 60
PaeR7I CTCGAG 1 cut(s) 1452
PagI TCATGA 1 cut(s) 162
PceI AGGCCT 1 cut(s) 380
PciSI GCTCTTC 2 cut(s) 95, 924
PctI GAATGC 1 cut(s) 1188
PfeI GAWTC 3 cut(s) 257, 1161, 1478
PflMI CCANNNNNTGG 2 cut(s) 619, 882
PkrI GCNGC 3 cut(s) 655, 784, 1427
PleI GAGTC 2 cut(s) 562, 1090
PpsI GAGTC 2 cut(s) 562, 1090
PshBI ATTAAT 1 cut(s) 1191
PsiI TTATAA 1 cut(s) 1840
Psp6I CCWGG 2 cut(s) 450, 612
PspGI CCWGG 2 cut(s) 450, 612
PspN4I GGNNCC 3 cut(s) 887, 1644, 1830
PspPI GGNCC 4 cut(s) 207, 885, 976, 1766
PspXI VCTCGAGB 1 cut(s) 1452
PstI CTGCAG 1 cut(s) 787
PsuI RGATCY 1 cut(s) 1828
RsaI GTAC 7 cut(s) 462, 516, 671, 719, 934, 1245, 1704
RsaNI GTAC 7 cut(s) 461, 515, 670, 718, 933, 1244, 1703
SapI GCTCTTC 2 cut(s) 95, 924
SaqAI TTAA 4 cut(s) 696, 1176, 1191, 1254
SatI GCNGC 3 cut(s) 654, 783, 1426
Sau3AI GATC 6 cut(s) 30, 144, 171, 1591, 1716, 1828
Sau96I GGNCC 4 cut(s) 207, 885, 976, 1766
ScaI AGTACT 3 cut(s) 671, 934, 1704
SchI GAGTC 2 cut(s) 563, 1091
ScrFI CCNGG 4 cut(s) 452, 614, 1004, 1005
SduI GDGCHC 3 cut(s) 90, 737, 1362
SfaNI GCATC 2 cut(s) 475, 907
SfcI CTRYAG 2 cut(s) 783, 960
Sfr274I CTCGAG 1 cut(s) 1452
SinI GGWCC 3 cut(s) 207, 885, 976
SlaI CTCGAG 1 cut(s) 1452
SmaI CCCGGG 1 cut(s) 1005
SmlI CTYRAG 2 cut(s) 1452, 1712
SmoI CTYRAG 2 cut(s) 1452, 1712
SpeI ACTAGT 2 cut(s) 176, 626
SseBI AGGCCT 1 cut(s) 380
SsiI CCGC 7 cut(s) 100, 106, 354, 402, 603, 750, 1426
SspI AATATT 1 cut(s) 795
SspMI CTAG 6 cut(s) 62, 177, 627, 773, 1412, 1572
StuI AGGCCT 1 cut(s) 380
StyD4I CCNGG 4 cut(s) 450, 612, 1002, 1003
StyI CCWWGG 1 cut(s) 565
TaaI ACNGT 5 cut(s) 46, 72, 188, 715, 768
TaiI ACGT 1 cut(s) 423
TaqI TCGA 5 cut(s) 255, 260, 1110, 1453, 1481
TatI WGTACW 6 cut(s) 460, 669, 717, 932, 1243, 1702
TauI GCSGC 1 cut(s) 1428
TfiI GAWTC 3 cut(s) 257, 1161, 1478
Tru1I TTAA 4 cut(s) 696, 1176, 1191, 1254
Tru9I TTAA 4 cut(s) 696, 1176, 1191, 1254
TscAI CASTG 2 cut(s) 652, 737
TseFI GTSAC 1 cut(s) 182
TseI GCWGC 2 cut(s) 653, 782
Tsp45I GTSAC 1 cut(s) 182
TspDTI ATGAA 6 cut(s) 563, 1365, 1488, 1556, 1739, 1818
TspGWI ACGGA 1 cut(s) 199
TspMI CCCGGG 1 cut(s) 1003
TspRI CASTG 2 cut(s) 652, 737
Van91I CCANNNNNTGG 2 cut(s) 619, 882
VneI GTGCAC 1 cut(s) 733
VpaK11BI GGWCC 3 cut(s) 207, 885, 976
VspI ATTAAT 1 cut(s) 1191
XagI CCTNNNNNAGG 1 cut(s) 113
XapI RAATTY 4 cut(s) 809, 946, 1250, 1458
XceI RCATGY 1 cut(s) 60
XhoI CTCGAG 1 cut(s) 1452
XmaI CCCGGG 1 cut(s) 1003
XmiI GTMKAC 2 cut(s) 140, 584
XspI CTAG 6 cut(s) 62, 177, 627, 773, 1412, 1572
ZrmI AGTACT 3 cut(s) 671, 934, 1704
Zsp2I ATGCAT 1 cut(s) 6
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.