Basic Information

Type: gene

Biological Identity

Species

rosa_multiflora

Chromosome

Rmu_sc0004689.1

Orthogroup ID

OG0000699

Physical Location & Seq

Genomic Coordinates Reverse (-)

22294 .. 25236

Gene Structure 2943 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rmu_sc0004689.1_g000004.1.cds

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1515 bp

atggcagaagtgatccttctcttcctttcagtggtcaccctgctaagctttccgtctacaaaagcctactacctctaccatatctgccccaacaccaccgtcttcaccccaaactctaccttccagtccaacctcaaccacctcctctctactctctcctccaacgccacgcgcaccggcttctacaacaccacctccggccgtacccctgccgacaccgtctacggcctcttcctctgccgcggtgacgtcaccaccaccacttgcaagtcctgcgtggccaccgcaacctccgaggtcgtgcagcgctgcccggtcgagaaagaggttgtgatatggtacgatgactgcatgctacgctactccaacaagtccttcttctctgtcgaagccgagtcgccgaaggtgtccctgttgaacacccaaaacgtcagcatcagcatcgaaccgaaccggttcagccaggttttggcgagcttgacggaggtggccacggcggctgcgaacagcagctataagttcgcgacgagagaggtgaacatcacggggttgattagcttgtacagtttggagcagtgcacgcaggacttgtctagttctgattgcaattggtgtcttgtacgagccatagcggagttgccgacttgctgcagccggaagcaaggaggacgagttctgtatccgagttgtaatgttaggtatgaactttatcccttttataactcgacgtcagcactggcgccgacgccaggggctcggcctctttctccgccaagctcagtgacgaaaggtaaagttcagctaagtgtagaagccaaaaaaagagaacaactggattggtcaagacgctgcaccataataggaggaatcgctcgaggaatcctctatcttcatgaagattctaggcttcgagttatacatcgtgatttgaaagctagcaatatcttgttggatgctaatatgaatccaaaaatttcagattttggaatggcaagaatgtttggagttgatgatcaaacgcaaggaaacacacggagaattgtcggcacttatggttacatggctccagaatatgctatggagggattgtattctgtaaaatctgatgtcttcagcttcggaatactcttgcttgagatcctaatgggaagaaagaacattttaggctttcatcccacaaattctgcaccaactcttctcagttttacttggcaattatggaatgaagggaaagtgttggagttgatggatccaatgctgaaagattcatgcaatccaaatgagttcttgagatgcatccgcattggattattgtgtgttcaagaagacgcaaataataggccaaccatgtcatcggttgttctaatgttaaagagtgaaagtatcagcctttccaagcctgagcgacctgccttctttacaggaagatctatcaatgatcactgccatacattaggggatttacctagttgctctgtcaatgctttgacgatttctgatgatatcccacgctga

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

504

Amino Acids

55.94

Weight (kDa)

8.03

Isoelectric Point (pI)

46.15

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61750
fragaria_vesca	FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica	MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica	Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis	pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis	RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata	RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora	Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii	Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa	Rorug06G0063800
rosa_samantha	Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana	Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	720
AatII	GACGTC	2 cut(s)	252, 731
Acc36I	ACCTGC	1 cut(s)	1417
AccB1I	GGYRCC	1 cut(s)	739
AccB7I	CCANNNNNTGG	1 cut(s)	469
AccI	GTMKAC	2 cut(s)	56, 222
AccII	CGCG	3 cut(s)	172, 243, 524
AciI	CCGC	7 cut(s)	241, 243, 285, 497, 632, 770, 1300
AclWI	GGATC	4 cut(s)	7, 1132, 1244, 1257
AcoI	YGGCCR	3 cut(s)	199, 279, 489
AcsI	RAATTY	2 cut(s)	972, 1180
AcuI	CTGAAG	1 cut(s)	1096
AcyI	GRCGYC	4 cut(s)	249, 728, 740, 746
AfaI	GTAC	4 cut(s)	205, 341, 563, 621
AfeI	AGCGCT	1 cut(s)	308
AfiI	CCNNNNNNNGG	3 cut(s)	31, 469, 749
AgeI	ACCGGT	1 cut(s)	453
AgsI	TTSAA	3 cut(s)	418, 931, 1322
AjnI	CCWGG	2 cut(s)	462, 748
AjuI	GAANNNNNNNTTGG	2 cut(s)	359, 391
AloI	GAACNNNNNNTCC	2 cut(s)	657, 689
AluBI	AGCT	8 cut(s)	48, 477, 513, 558, 777, 802, 935, 1116
AluI	AGCT	8 cut(s)	48, 477, 513, 558, 777, 802, 935, 1116
Alw21I	GWGCWC	1 cut(s)	581
Alw44I	GTGCAC	1 cut(s)	577
AlwI	GGATC	4 cut(s)	7, 1132, 1244, 1257
Ama87I	CYCGRG	1 cut(s)	873
Aor51HI	AGCGCT	1 cut(s)	308
AoxI	GGCC	6 cut(s)	199, 226, 279, 489, 758, 1340
ApaLI	GTGCAC	1 cut(s)	577
ApeKI	GCWGC	7 cut(s)	304, 309, 500, 510, 648, 651, 849
ApoI	RAATTY	2 cut(s)	972, 1180
AsiGI	ACCGGT	1 cut(s)	453
Asp700I	GAANNNNTTC	1 cut(s)	455
AspLEI	GCGC	3 cut(s)	174, 309, 742
AsuC2I	CCSGG	1 cut(s)	314
AsuHPI	GGTGA	5 cut(s)	28, 97, 244, 257, 547
AsuNHI	GCTAGC	1 cut(s)	935
AvaI	CYCGRG	1 cut(s)	873
BaeGI	GKGCMC	1 cut(s)	581
BalI	TGGCCA	2 cut(s)	281, 491
BamHI	GGATCC	1 cut(s)	1249
BanI	GGYRCC	1 cut(s)	739
BanII	GRGCYC	1 cut(s)	757
BbsI	GAAGAC	3 cut(s)	94, 1102, 1332
Bbv12I	GWGCWC	1 cut(s)	581
BbvI	GCAGC	7 cut(s)	296, 316, 487, 522, 635, 663, 836
BccI	CCATC	1 cut(s)	1240
BceAI	ACGGC	3 cut(s)	186, 241, 510
BcgI	CGANNNNNNTGC	2 cut(s)	424, 458
BciT130I	CCWGG	2 cut(s)	464, 750
BciVI	GTATCC	1 cut(s)	690
BclI	TGATCA	2 cut(s)	1012, 1438
BcnI	CCSGG	1 cut(s)	314
BfaI	CTAG	4 cut(s)	594, 903, 936, 1467
BfmI	CTRYAG	1 cut(s)	649
BfoI	RGCGCY	2 cut(s)	310, 743
BfuAI	ACCTGC	1 cut(s)	1417
BfuI	GTATCC	1 cut(s)	690
BglI	GCCNNNNNGGC	1 cut(s)	497
BglII	AGATCT	1 cut(s)	1427
BisI	GCNGC	9 cut(s)	241, 305, 310, 498, 501, 511, 649, 652, 850
BlpI	GCTNAGC	1 cut(s)	44
BlsI	GCNGC	9 cut(s)	242, 306, 311, 499, 502, 512, 650, 653, 851
Bme1390I	CCNGG	3 cut(s)	314, 464, 750
BmeT110I	CYCGRG	1 cut(s)	873
BmiI	GGNNCC	3 cut(s)	741, 1065, 1251
BmrFI	CCNGG	3 cut(s)	314, 464, 750
BmsI	GCATC	5 cut(s)	444, 450, 943, 1283, 1305
BmtI	GCTAGC	1 cut(s)	939
BpiI	GAAGAC	3 cut(s)	94, 1102, 1332
BplI	GAGNNNNNCTC	2 cut(s)	867, 899
BpmI	CTGGAG	1 cut(s)	1050
Bpu10I	CCTNAGC	1 cut(s)	1401
Bpu1102I	GCTNAGC	1 cut(s)	44
BpuEI	CTTGAG	2 cut(s)	1154, 1309
BpuMI	CCSGG	1 cut(s)	314
BsaHI	GRCGYC	4 cut(s)	249, 728, 740, 746
BsaJI	CCNNGG	4 cut(s)	241, 294, 492, 749
BsaWI	WCCGGW	1 cut(s)	453
BsaXI	ACNNNNNCTCC	6 cut(s)	179, 209, 657, 687, 1073, 1103
Bsc4I	CCNNNNNNNGG	3 cut(s)	31, 469, 749
Bse118I	RCCGGY	2 cut(s)	176, 453
Bse1I	ACTGG	3 cut(s)	124, 741, 837
BseBI	CCWGG	2 cut(s)	464, 750
BseDI	CCNNGG	4 cut(s)	241, 294, 492, 749
BseGI	GGATG	3 cut(s)	958, 1171, 1296
BseLI	CCNNNNNNNGG	3 cut(s)	31, 469, 749
BseMII	CTCAG	3 cut(s)	792, 1213, 1392
BseNI	ACTGG	3 cut(s)	124, 741, 837
BseRI	GAGGAG	2 cut(s)	134, 148
BseSI	GKGCMC	1 cut(s)	581
BseX3I	CGGCCG	1 cut(s)	199
BseXI	GCAGC	7 cut(s)	296, 316, 487, 522, 635, 663, 836
BsgI	GTGCAG	3 cut(s)	323, 835, 1170
Bsh1236I	CGCG	3 cut(s)	172, 243, 524
Bsh1285I	CGRYCG	2 cut(s)	202, 318
BshFI	GGCC	6 cut(s)	201, 228, 281, 491, 760, 1342
BshNI	GGYRCC	1 cut(s)	739
BshTI	ACCGGT	1 cut(s)	453
BsiEI	CGRYCG	2 cut(s)	202, 318
BsiHKAI	GWGCWC	1 cut(s)	581
BsiHKCI	CYCGRG	1 cut(s)	873
BsiSI	CCGG	5 cut(s)	177, 198, 314, 454, 655
BslFI	GGGAC	1 cut(s)	394
BslI	CCNNNNNNNGG	3 cut(s)	31, 469, 749
BsmFI	GGGAC	1 cut(s)	394
BsnI	GGCC	6 cut(s)	201, 228, 281, 491, 760, 1342
BsoBI	CYCGRG	1 cut(s)	873
Bsp1286I	GDGCHC	2 cut(s)	581, 757
Bsp1407I	TGTACA	1 cut(s)	561
Bsp143I	GATC	6 cut(s)	12, 1012, 1137, 1249, 1427, 1438
Bsp1720I	GCTNAGC	1 cut(s)	44
Bsp68I	TCGCGA	1 cut(s)	524
BspACI	CCGC	7 cut(s)	241, 243, 285, 497, 632, 770, 1300
BspANI	GGCC	6 cut(s)	201, 228, 281, 491, 760, 1342
BspCNI	CTCAG	3 cut(s)	791, 1212, 1393
BspFNI	CGCG	3 cut(s)	172, 243, 524
BspHI	TCATGA	1 cut(s)	892
BspLI	GGNNCC	3 cut(s)	741, 1065, 1251
BspMAI	CTGCAG	1 cut(s)	653
BspMI	ACCTGC	1 cut(s)	1417
BspOI	GCTAGC	1 cut(s)	939
BspPI	GGATC	4 cut(s)	7, 1132, 1244, 1257
BspT107I	GGYRCC	1 cut(s)	739
BsrFI	RCCGGY	2 cut(s)	176, 453
BsrGI	TGTACA	1 cut(s)	561
BsrI	ACTGG	3 cut(s)	124, 741, 837
BssAI	RCCGGY	2 cut(s)	176, 453
BssECI	CCNNGG	4 cut(s)	241, 294, 492, 749
BssMI	GATC	6 cut(s)	12, 1012, 1137, 1249, 1427, 1438
BssNI	GRCGYC	4 cut(s)	249, 728, 740, 746
Bst2UI	CCWGG	2 cut(s)	464, 750
Bst4CI	ACNGT	3 cut(s)	100, 220, 566
Bst6I	CTCTTC	3 cut(s)	26, 236, 1200
BstACI	GRCGYC	4 cut(s)	249, 728, 740, 746
BstAPI	GCANNNNNTGC	1 cut(s)	273
BstAUI	TGTACA	1 cut(s)	561
BstC8I	GCNNGC	4 cut(s)	353, 475, 581, 937
BstDEI	CTNAG	5 cut(s)	44, 778, 803, 1199, 1401
BstDSI	CCRYGG	2 cut(s)	241, 492
BstEII	GGTNACC	1 cut(s)	34
BstF5I	GGATG	3 cut(s)	958, 1171, 1296
BstFNI	CGCG	3 cut(s)	172, 243, 524
BstH2I	RGCGCY	2 cut(s)	310, 743
BstHHI	GCGC	3 cut(s)	174, 309, 742
BstKTI	GATC	6 cut(s)	15, 1015, 1140, 1252, 1430, 1441
BstMBI	GATC	6 cut(s)	12, 1012, 1137, 1249, 1427, 1438
BstMCI	CGRYCG	2 cut(s)	202, 318
BstMWI	GCNNNNNNNGC	4 cut(s)	273, 357, 497, 580
BstNI	CCWGG	2 cut(s)	464, 750
BstNSI	RCATGY	1 cut(s)	355
BstPI	GGTNACC	1 cut(s)	34
BstSCI	CCNGG	3 cut(s)	312, 462, 748
BstSFI	CTRYAG	1 cut(s)	649
BstSLI	GKGCMC	1 cut(s)	581
BstUI	CGCG	3 cut(s)	172, 243, 524
BstV1I	GCAGC	7 cut(s)	296, 316, 487, 522, 635, 663, 836
BstV2I	GAAGAC	3 cut(s)	94, 1102, 1332
BstX2I	RGATCY	3 cut(s)	1137, 1249, 1427
BstYI	RGATCY	3 cut(s)	1137, 1249, 1427
BstZI	CGGCCG	1 cut(s)	199
BsuI	GTATCC	1 cut(s)	690
BsuRI	GGCC	6 cut(s)	201, 228, 281, 491, 760, 1342
BtgI	CCRYGG	2 cut(s)	241, 492
BtsCI	GGATG	3 cut(s)	958, 1171, 1296
BtsI	GCAGTG	2 cut(s)	581, 1441
BtsIMutI	CAGTG	5 cut(s)	36, 581, 734, 786, 1441
BtuMI	TCGCGA	1 cut(s)	524
BveI	ACCTGC	1 cut(s)	1417
Cac8I	GCNNGC	4 cut(s)	353, 475, 581, 937
CciI	TCATGA	1 cut(s)	892
CfoI	GCGC	3 cut(s)	174, 309, 742
Cfr10I	RCCGGY	2 cut(s)	176, 453
Cfr42I	CCGCGG	1 cut(s)	244
CseI	GACGC	3 cut(s)	754, 855, 1337
Csp6I	GTAC	4 cut(s)	204, 340, 562, 620
CspAI	ACCGGT	1 cut(s)	453
CviAII	CATG	5 cut(s)	352, 893, 1060, 1269, 1348
CviQI	GTAC	4 cut(s)	204, 340, 562, 620
DdeI	CTNAG	5 cut(s)	44, 778, 803, 1199, 1401
DinI	GGCGCC	1 cut(s)	741
DpnI	GATC	6 cut(s)	14, 1014, 1139, 1251, 1429, 1440
DpnII	GATC	6 cut(s)	12, 1012, 1137, 1249, 1427, 1438
EaeI	YGGCCR	3 cut(s)	199, 279, 489
EagI	CGGCCG	1 cut(s)	199
Eam1104I	CTCTTC	3 cut(s)	26, 236, 1200
EarI	CTCTTC	3 cut(s)	26, 236, 1200
EciI	GGCGGA	1 cut(s)	759
EclXI	CGGCCG	1 cut(s)	199
Eco24I	GRGCYC	1 cut(s)	757
Eco32I	GATATC	1 cut(s)	1504
Eco47III	AGCGCT	1 cut(s)	308
Eco52I	CGGCCG	1 cut(s)	199
Eco57I	CTGAAG	1 cut(s)	1096
Eco88I	CYCGRG	1 cut(s)	873
Eco91I	GGTNACC	1 cut(s)	34
EcoO65I	GGTNACC	1 cut(s)	34
EcoRII	CCWGG	2 cut(s)	462, 748
EcoRV	GATATC	1 cut(s)	1504
EcoT22I	ATGCAT	1 cut(s)	1298
EcoT38I	GRGCYC	1 cut(s)	757
EgeI	GGCGCC	1 cut(s)	741
EheI	GGCGCC	1 cut(s)	741
FaeI	CATG	5 cut(s)	355, 896, 1063, 1272, 1351
FalI	AAGNNNNNCTT	3 cut(s)	32, 362, 394
FaqI	GGGAC	1 cut(s)	394
FatI	CATG	5 cut(s)	351, 892, 1059, 1268, 1347
FbaI	TGATCA	2 cut(s)	1012, 1438
FblI	GTMKAC	2 cut(s)	56, 222
Fnu4HI	GCNGC	9 cut(s)	241, 305, 310, 498, 501, 511, 649, 652, 850
FokI	GGATG	3 cut(s)	965, 1158, 1283
FriOI	GRGCYC	1 cut(s)	757
Fsp4HI	GCNGC	9 cut(s)	241, 305, 310, 498, 501, 511, 649, 652, 850
FspBI	CTAG	4 cut(s)	594, 903, 936, 1467
GlaI	GCGC	3 cut(s)	173, 308, 741
GluI	GCNGC	9 cut(s)	241, 305, 310, 498, 501, 511, 649, 652, 850
GsuI	CTGGAG	1 cut(s)	1050
HaeII	RGCGCY	2 cut(s)	310, 743
HaeIII	GGCC	6 cut(s)	201, 228, 281, 491, 760, 1342
HapII	CCGG	5 cut(s)	177, 198, 314, 454, 655
HgaI	GACGC	3 cut(s)	754, 855, 1337
HhaI	GCGC	3 cut(s)	174, 309, 742
Hin1I	GRCGYC	4 cut(s)	249, 728, 740, 746
Hin1II	CATG	5 cut(s)	355, 896, 1063, 1272, 1351
Hin6I	GCGC	3 cut(s)	172, 307, 740
HinP1I	GCGC	3 cut(s)	172, 307, 740
HindIII	AAGCTT	1 cut(s)	46
HinfI	GANTC	6 cut(s)	395, 867, 879, 899, 964, 1265
HpaII	CCGG	5 cut(s)	177, 198, 314, 454, 655
HphI	GGTGA	5 cut(s)	28, 97, 244, 257, 547
Hpy166II	GTNNAC	4 cut(s)	57, 223, 538, 579
Hpy188I	TCNGA	7 cut(s)	295, 601, 684, 979, 1105, 1121, 1498
Hpy188III	TCNNGA	8 cut(s)	319, 523, 843, 893, 923, 1067, 1288, 1322
Hpy8I	GTNNAC	4 cut(s)	57, 223, 538, 579
Hpy99I	CGWCG	3 cut(s)	529, 730, 748
HpyAV	CCTTC	6 cut(s)	26, 130, 385, 397, 1220, 1423
HpyCH4III	ACNGT	3 cut(s)	100, 220, 566
HpyCH4IV	ACGT	3 cut(s)	249, 429, 728
HpyF10VI	GCNNNNNNNGC	4 cut(s)	273, 357, 497, 580
HpyF3I	CTNAG	5 cut(s)	44, 778, 803, 1199, 1401
HpySE526I	ACGT	3 cut(s)	249, 429, 728
Hsp92I	GRCGYC	4 cut(s)	249, 728, 740, 746
Hsp92II	CATG	5 cut(s)	355, 896, 1063, 1272, 1351
HspAI	GCGC	3 cut(s)	172, 307, 740
KasI	GGCGCC	1 cut(s)	739
Ksp22I	TGATCA	2 cut(s)	1012, 1438
KspI	CCGCGG	1 cut(s)	244
Kzo9I	GATC	6 cut(s)	12, 1012, 1137, 1249, 1427, 1438
LmnI	GCTCC	2 cut(s)	571, 1069
Lsp1109I	GCAGC	7 cut(s)	296, 316, 487, 522, 635, 663, 836
LweI	GCATC	5 cut(s)	444, 450, 943, 1283, 1305
MaeI	CTAG	4 cut(s)	594, 903, 936, 1467
MaeII	ACGT	3 cut(s)	249, 429, 728
MaeIII	GTNAC	5 cut(s)	34, 245, 250, 781, 1055
MalI	GATC	6 cut(s)	14, 1014, 1139, 1251, 1429, 1440
MboI	GATC	6 cut(s)	12, 1012, 1137, 1249, 1427, 1438
MfeI	CAATTG	1 cut(s)	607
MflI	RGATCY	3 cut(s)	1137, 1249, 1427
MhlI	GDGCHC	2 cut(s)	581, 757
MlsI	TGGCCA	2 cut(s)	281, 491
MluCI	AATT	5 cut(s)	607, 972, 1038, 1180, 1214
MluNI	TGGCCA	2 cut(s)	281, 491
Mly113I	GGCGCC	1 cut(s)	740
MlyI	GAGTC	1 cut(s)	404
MmeI	TCCRAC	5 cut(s)	153, 186, 390, 930, 1218
Mox20I	TGGCCA	2 cut(s)	281, 491
Mph1103I	ATGCAT	1 cut(s)	1298
MroXI	GAANNNNTTC	1 cut(s)	455
MscI	TGGCCA	2 cut(s)	281, 491
MseI	TTAA	1 cut(s)	1370
Msp20I	TGGCCA	2 cut(s)	281, 491
MspA1I	CMGCKG	1 cut(s)	243
MspI	CCGG	5 cut(s)	177, 198, 314, 454, 655
MspR9I	CCNGG	3 cut(s)	314, 464, 750
MunI	CAATTG	1 cut(s)	607
MvaI	CCWGG	2 cut(s)	464, 750
MvnI	CGCG	3 cut(s)	172, 243, 524
MwoI	GCNNNNNNNGC	4 cut(s)	273, 357, 497, 580
NarI	GGCGCC	1 cut(s)	740
NciI	CCSGG	1 cut(s)	314
NdeII	GATC	6 cut(s)	12, 1012, 1137, 1249, 1427, 1438
NheI	GCTAGC	1 cut(s)	935
NlaIII	CATG	5 cut(s)	355, 896, 1063, 1272, 1351
NlaIV	GGNNCC	3 cut(s)	741, 1065, 1251
NmeAIII	GCCGAG	2 cut(s)	418, 736
NmuCI	GTSAC	4 cut(s)	34, 245, 250, 781
NruI	TCGCGA	1 cut(s)	524
NsiI	ATGCAT	1 cut(s)	1298
NspI	RCATGY	1 cut(s)	355
PaeI	GCATGC	1 cut(s)	355
PaeR7I	CTCGAG	1 cut(s)	873
PagI	TCATGA	1 cut(s)	892
PcsI	WCGNNNNNNNCGW	1 cut(s)	500
PdmI	GAANNNNTTC	1 cut(s)	455
PfeI	GAWTC	5 cut(s)	867, 879, 899, 964, 1265
PflFI	GACNNNGTC	1 cut(s)	218
PflMI	CCANNNNNTGG	1 cut(s)	469
PinAI	ACCGGT	1 cut(s)	453
PkrI	GCNGC	9 cut(s)	242, 306, 311, 499, 502, 512, 650, 653, 851
PleI	GAGTC	1 cut(s)	403
PluTI	GGCGCC	1 cut(s)	743
PpsI	GAGTC	1 cut(s)	403
PsiI	TTATAA	1 cut(s)	720
Psp6I	CCWGG	2 cut(s)	462, 748
PspEI	GGTNACC	1 cut(s)	34
PspGI	CCWGG	2 cut(s)	462, 748
PspN4I	GGNNCC	3 cut(s)	741, 1065, 1251
PspXI	VCTCGAGB	1 cut(s)	873
PstI	CTGCAG	1 cut(s)	653
PsuI	RGATCY	3 cut(s)	1137, 1249, 1427
PsyI	GACNNNGTC	1 cut(s)	218
RruI	TCGCGA	1 cut(s)	524
RsaI	GTAC	4 cut(s)	205, 341, 563, 621
RsaNI	GTAC	4 cut(s)	204, 340, 562, 620
SacII	CCGCGG	1 cut(s)	244
SaqAI	TTAA	1 cut(s)	1370
SatI	GCNGC	9 cut(s)	241, 305, 310, 498, 501, 511, 649, 652, 850
Sau3AI	GATC	6 cut(s)	12, 1012, 1137, 1249, 1427, 1438
SchI	GAGTC	1 cut(s)	404
ScrFI	CCNGG	3 cut(s)	314, 464, 750
SduI	GDGCHC	2 cut(s)	581, 757
SfaNI	GCATC	5 cut(s)	444, 450, 943, 1283, 1305
SfcI	CTRYAG	1 cut(s)	649
SfoI	GGCGCC	1 cut(s)	741
Sfr274I	CTCGAG	1 cut(s)	873
Sfr303I	CCGCGG	1 cut(s)	244
SgrBI	CCGCGG	1 cut(s)	244
SlaI	CTCGAG	1 cut(s)	873
SmlI	CTYRAG	3 cut(s)	873, 1133, 1288
SmoI	CTYRAG	3 cut(s)	873, 1133, 1288
SphI	GCATGC	1 cut(s)	355
Sse9I	AATT	5 cut(s)	607, 972, 1038, 1180, 1214
SsiI	CCGC	7 cut(s)	241, 243, 285, 497, 632, 770, 1300
SspDI	GGCGCC	1 cut(s)	739
SspMI	CTAG	4 cut(s)	594, 903, 936, 1467
StyD4I	CCNGG	3 cut(s)	312, 462, 748
TaaI	ACNGT	3 cut(s)	100, 220, 566
TaiI	ACGT	3 cut(s)	252, 432, 731
TaqI	TCGA	6 cut(s)	318, 387, 444, 725, 874, 910
TasI	AATT	5 cut(s)	607, 972, 1038, 1180, 1214
TatI	WGTACW	1 cut(s)	561
TauI	GCSGC	2 cut(s)	243, 500
TfiI	GAWTC	5 cut(s)	867, 879, 899, 964, 1265
Tru1I	TTAA	1 cut(s)	1370
Tru9I	TTAA	1 cut(s)	1370
TscAI	CASTG	5 cut(s)	36, 581, 741, 786, 1448
TseFI	GTSAC	4 cut(s)	34, 245, 250, 781
TseI	GCWGC	7 cut(s)	304, 309, 500, 510, 648, 651, 849
Tsp45I	GTSAC	4 cut(s)	34, 245, 250, 781
TspDTI	ATGAA	7 cut(s)	717, 881, 909, 977, 1160, 1239, 1257
TspGWI	ACGGA	3 cut(s)	42, 497, 1048
TspRI	CASTG	5 cut(s)	36, 581, 741, 786, 1448
Tth111I	GACNNNGTC	1 cut(s)	218
Van91I	CCANNNNNTGG	1 cut(s)	469
VneI	GTGCAC	1 cut(s)	577
XapI	RAATTY	2 cut(s)	972, 1180
XceI	RCATGY	1 cut(s)	355
XhoI	CTCGAG	1 cut(s)	873
XmiI	GTMKAC	2 cut(s)	56, 222
XmnI	GAANNNNTTC	1 cut(s)	455
XspI	CTAG	4 cut(s)	594, 903, 936, 1467
ZraI	GACGTC	2 cut(s)	250, 729
Zsp2I	ATGCAT	1 cut(s)	1298

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.