Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000002

Orthogroup ID

OG0000699

Physical Location & Seq

Genomic Coordinates Reverse (-)

55505532 .. 55509746

Gene Structure 4215 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_2G00122420.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2049 bp

ATGCTTTCTTTCCAAGTGTTTTGGATCTGTTTAGTGAGAAGGCTCATTTCAAGAAAACAAAGAGGGTCTTCTGGTGAAGACCTGAACGACATTGAAGCTGGTTGGCAGGTCATCCCTGACCTCTATGGTGACAGCAACACAAGATTGTTTACAGAGTCATGCATATCCAACCACTGTGTTAAAGACCTCAAGTCAAGCACTACTGTAGAGCAGTCTATTACCAATAAGTACCTCAACCATATCTGCGAAAACACCACCACTTTCACCGCAAACTCCTACTTCCAATTTCATCGCGATCAACTGCTGTCGACCCTTGTCTCTAACGCCACCAGTGACAATGGCTTTTACAATGCCACTGCTGGCGGCCAAATCTCAAACGAGACCGTCTACGGACTCTTCCTCTGCCGCGGTGACCAGTCCAAAGATTCTTGTAGTGACTGCGTAACCGCTGCAGCCTCTGATGTTGTGAAACGATGCCCAATCGAGAAACAGGTTGTTATATGGTATGATTACTGCATGATACGCTACTCTAACTATTCATTCTTTTCTATTGATGAGGATTCACCTTTTTCGTTTACACGGAACAAGGAGAATGTTACGAAGGATGAGGATTACGTTGTGGGAGTTACTATGAATGGGTTAGTACAAAAGGTTACCGGTGCCATTAAAAAGTTTGCGACCCAAGAATCGAACATCACCGTGTCAAATGGAAAGCTGATCTACAGCCTTGGACAGTGCACGCAGGATCTGTCCACTGCAGATTGCAATATCTGTCTTAGTAGAGCCATAGCAGTGCTTCGGACTAAAGTTAGAGGAAAAACAGGGGGGCGTCTTCTATCACTAAGTTGTAATATTAGGTTCGATTTGAAACCCTTTTACACATCACAGGCGCCACTATCATCTCCACGGGCCCCTGTAGCACGGCCAACACTTGGAGGAAAAAGCAAACTCTCATCCAAAGTCATTGTTAGTATTCTTGCTCCTGTTGCTCTTTGTGTGCTAGTTGTGGTTCTGGCCGGATGCTATTTTGGCAAGAGACTCAGAAGAGCGAAACGACAAAAGAACAAAGCTGGAAATGATATAACGTCCACGATTGAGTCGTTGCAATTTGACTTGCGAACAATCGAAGCAGCCACAAAGAAGTTTTCTGGTGATAACAAGTTAGGTGAAGGTGGATTTGGTGAAGTTTTCAAGGGAACCCTTGATAATGGACAAGAAATAGCAGTGAAGAGACTGTCAAAAAGTTCTGGACAAGGTGTACGAGAATTTAAGAATGAGGTTGTATTGGTTGCCAAGCTTCAACATCGAAATCTTGTCAGGCTTCTGGGATTTTGCTTGGAAGGAGAAGAGACCATACTTGTCTATGAATATGTACCCAACAAAAGTCTTGATCATTTTCTTTTTGGAGGGATCGCTGGAGGACTTGTCTATCTTCACGAAGATTCAAGGCTTAGAGTCATACATCGTGATTTGAAAGCTAGCAATATCTTGTTGGATGCCAATATGAATCCTAAAATTTCAGATTTTGGGATGGCAAGAATGTTTGGAGTTGATGATCAAACTCAAGGAAGCACCAAAAGAATTGTCGGTACTTATGGCTATATGGCTCCTGAATATGCGATGGAGGGATTGTATTCTGTAAAGTCCGACGTCTTCAGCTTCGGGATACTCTTGCTAGAGATTCTAACAGGAAGAAAAAACTTTTTAGGGTTTCGTTGTACAAATTATCCACCAACGCTCCTCAGTTATGCTTGGCAATTATGGAATGAAGGGAAAGTGTTGGAGTTAATAGATCCATTTCTGAAAGATTGTTGTAGTTCAAATGAGTTCTTGAGATACATTCAGATCGGGTTACTGTGTGTTCAAGAAGACGCAAATAGAAGGCCAACCATGTCATCAGTTGTATTAATGTTAAAGAGTGAAGCCATCAGTCTTCCTAAACCTGAACAACCTGCTTTCTTATTTACAGGAAGACCTCGCAATGATCACATTGATGCTCCTAGTTGTTCAGCGAATAGTTTGACGATATCTGTTAATGTGCCACGTTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

682

Amino Acids

75.81

Weight (kDa)

8.75

Isoelectric Point (pI)

45.58

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Neprosin	PF03080	24 - 52	3e-06	Neprosin
Stress-antifung	PF01657	82 - 179	1.9e-24	Salt stress response/antifungal
Stress-antifung	PF01657	212 - 288	4.5e-08	Salt stress response/antifungal
PK_Tyr_Ser-Thr	PF07714	385 - 635	6.9e-42	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	385 - 570	1.4e-40	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61750
fragaria_vesca	FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica	MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica	Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis	pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis	RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata	RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora	Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii	Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa	Rorug06G0063800
rosa_samantha	Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana	Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AatII	GACGTC	1 cut(s)	1653
Acc36I	ACCTGC	2 cut(s)	97, 1960
AccB1I	GGYRCC	2 cut(s)	659, 889
AccB7I	CCANNNNNTGG	1 cut(s)	932
AccI	GTMKAC	2 cut(s)	308, 387
AccII	CGCG	2 cut(s)	294, 408
AciI	CCGC	5 cut(s)	267, 363, 406, 408, 447
AclWI	GGATC	4 cut(s)	32, 753, 1418, 1787
AcoI	YGGCCR	3 cut(s)	364, 923, 1014
AcsI	RAATTY	2 cut(s)	1265, 1515
AcuI	CTGAAG	1 cut(s)	1639
AcyI	GRCGYC	3 cut(s)	829, 890, 1650
AfaI	GTAC	6 cut(s)	230, 645, 1260, 1374, 1591, 1720
AfiI	CCNNNNNNNGG	1 cut(s)	932
AgeI	ACCGGT	1 cut(s)	656
AgsI	TTSAA	9 cut(s)	51, 95, 868, 1192, 1301, 1446, 1474, 1821, 1865
AhdI	GACNNNNNGTC	1 cut(s)	190
AjuI	GAANNNNNNNTTGG	2 cut(s)	1161, 1193
AluBI	AGCT	6 cut(s)	98, 715, 1070, 1297, 1478, 1659
AluI	AGCT	6 cut(s)	98, 715, 1070, 1297, 1478, 1659
Alw21I	GWGCWC	1 cut(s)	740
Alw26I	GTCTC	5 cut(s)	322, 374, 1030, 1225, 1343
Alw44I	GTGCAC	1 cut(s)	736
AlwI	GGATC	4 cut(s)	32, 753, 1418, 1787
AlwNI	CAGNNNCTG	2 cut(s)	458, 748
AoxI	GGCC	5 cut(s)	364, 909, 923, 1014, 1883
ApaI	GGGCCC	1 cut(s)	913
ApaLI	GTGCAC	1 cut(s)	736
ApeKI	GCWGC	3 cut(s)	449, 452, 1130
ApoI	RAATTY	2 cut(s)	1265, 1515
ArsI	GACNNNNNNTTYG	2 cut(s)	1569, 1601
AseI	ATTAAT	1 cut(s)	1907
AsiGI	ACCGGT	1 cut(s)	656
AspLEI	GCGC	1 cut(s)	892
AspS9I	GGNCC	2 cut(s)	909, 910
AsuHPI	GGTGA	9 cut(s)	86, 140, 256, 422, 555, 688, 1163, 1178, 1193
AsuNHI	GCTAGC	1 cut(s)	1478
BaeGI	GKGCMC	2 cut(s)	740, 913
BanI	GGYRCC	2 cut(s)	659, 889
BanII	GRGCYC	1 cut(s)	913
BarI	GAAGNNNNNNTAC	2 cut(s)	1338, 1370
BbsI	GAAGAC	7 cut(s)	60, 84, 824, 1645, 1875, 1925, 1978
Bbv12I	GWGCWC	1 cut(s)	740
BbvI	GCAGC	3 cut(s)	436, 464, 1142
BccI	CCATC	3 cut(s)	1525, 1615, 1934
BceAI	ACGGC	1 cut(s)	938
BciVI	GTATCC	1 cut(s)	1659
BclI	TGATCA	3 cut(s)	1390, 1555, 1984
BcoDI	GTCTC	5 cut(s)	322, 374, 1030, 1225, 1343
BfaI	CTAG	4 cut(s)	1001, 1479, 1676, 2001
BfmI	CTRYAG	5 cut(s)	204, 450, 721, 756, 915
BfoI	RGCGCY	1 cut(s)	893
BfuAI	ACCTGC	2 cut(s)	97, 1960
BfuI	GTATCC	1 cut(s)	1659
BisI	GCNGC	5 cut(s)	364, 406, 450, 453, 1131
BlsI	GCNGC	5 cut(s)	365, 407, 451, 454, 1132
BmeRI	GACNNNNNGTC	1 cut(s)	190
BmgT120I	GGNCC	2 cut(s)	909, 910
BmiI	GGNNCC	6 cut(s)	661, 891, 911, 912, 1198, 1608
BmsI	GCATC	4 cut(s)	464, 1010, 1486, 1984
BmtI	GCTAGC	1 cut(s)	1482
BoxI	GACNNNNGTC	1 cut(s)	314
BpiI	GAAGAC	7 cut(s)	60, 84, 824, 1645, 1875, 1925, 1978
BpmI	CTGGAG	1 cut(s)	1437
BpuEI	CTTGAG	3 cut(s)	173, 1548, 1852
BsaHI	GRCGYC	3 cut(s)	829, 890, 1650
BsaI	GGTCTC	2 cut(s)	374, 1343
BsaJI	CCNNGG	3 cut(s)	406, 727, 905
BsaWI	WCCGGW	1 cut(s)	656
BsaXI	ACNNNNNCTCC	6 cut(s)	1410, 1440, 1616, 1646, 1722, 1752
Bsc4I	CCNNNNNNNGG	1 cut(s)	932
Bse118I	RCCGGY	1 cut(s)	656
Bse1I	ACTGG	2 cut(s)	330, 415
Bse3DI	GCAATG	1 cut(s)	1987
BseDI	CCNNGG	3 cut(s)	406, 727, 905
BseGI	GGATG	6 cut(s)	111, 610, 953, 1025, 1501, 1536
BseLI	CCNNNNNNNGG	1 cut(s)	932
BseMI	GCAATG	1 cut(s)	1987
BseMII	CTCAG	2 cut(s)	1054, 1756
BseNI	ACTGG	2 cut(s)	330, 415
BseRI	GAGGAG	1 cut(s)	1730
BseSI	GKGCMC	2 cut(s)	740, 913
BseXI	GCAGC	3 cut(s)	436, 464, 1142
Bsh1236I	CGCG	2 cut(s)	294, 408
BshFI	GGCC	5 cut(s)	366, 911, 925, 1016, 1885
BshNI	GGYRCC	2 cut(s)	659, 889
BshTI	ACCGGT	1 cut(s)	656
BsiHKAI	GWGCWC	1 cut(s)	740
BsiSI	CCGG	2 cut(s)	657, 1017
BslI	CCNNNNNNNGG	1 cut(s)	932
BsmAI	GTCTC	5 cut(s)	322, 374, 1030, 1225, 1343
BsnI	GGCC	5 cut(s)	366, 911, 925, 1016, 1885
Bso31I	GGTCTC	2 cut(s)	374, 1343
Bsp120I	GGGCCC	1 cut(s)	909
Bsp1286I	GDGCHC	2 cut(s)	740, 913
Bsp1407I	TGTACA	1 cut(s)	1718
Bsp68I	TCGCGA	1 cut(s)	294
BspACI	CCGC	5 cut(s)	267, 363, 406, 408, 447
BspANI	GGCC	5 cut(s)	366, 911, 925, 1016, 1885
BspCNI	CTCAG	2 cut(s)	1053, 1755
BspFNI	CGCG	2 cut(s)	294, 408
BspLI	GGNNCC	6 cut(s)	661, 891, 911, 912, 1198, 1608
BspMAI	CTGCAG	2 cut(s)	454, 760
BspMI	ACCTGC	2 cut(s)	97, 1960
BspOI	GCTAGC	1 cut(s)	1482
BspPI	GGATC	4 cut(s)	32, 753, 1418, 1787
BspQI	GCTCTTC	1 cut(s)	1039
BspT107I	GGYRCC	2 cut(s)	659, 889
BspTNI	GGTCTC	2 cut(s)	374, 1343
BsrDI	GCAATG	1 cut(s)	1987
BsrFI	RCCGGY	1 cut(s)	656
BsrGI	TGTACA	1 cut(s)	1718
BsrI	ACTGG	2 cut(s)	330, 415
BssAI	RCCGGY	1 cut(s)	656
BssECI	CCNNGG	3 cut(s)	406, 727, 905
BssNI	GRCGYC	3 cut(s)	829, 890, 1650
BssT1I	CCWWGG	1 cut(s)	727
Bst4CI	ACNGT	7 cut(s)	176, 205, 385, 700, 735, 1236, 1857
Bst6I	CTCTTC	4 cut(s)	401, 1039, 1223, 1341
BstACI	GRCGYC	3 cut(s)	829, 890, 1650
BstAUI	TGTACA	1 cut(s)	1718
BstC8I	GCNNGC	3 cut(s)	361, 740, 1480
BstDEI	CTNAG	5 cut(s)	776, 842, 1040, 1451, 1742
BstDSI	CCRYGG	2 cut(s)	406, 905
BstEII	GGTNACC	2 cut(s)	410, 652
BstF5I	GGATG	6 cut(s)	111, 610, 953, 1025, 1501, 1536
BstFNI	CGCG	2 cut(s)	294, 408
BstH2I	RGCGCY	1 cut(s)	893
BstHHI	GCGC	1 cut(s)	892
BstMAI	GTCTC	5 cut(s)	322, 374, 1030, 1225, 1343
BstMWI	GCNNNNNNNGC	4 cut(s)	522, 917, 986, 1029
BstPAI	GACNNNNGTC	1 cut(s)	314
BstPI	GGTNACC	2 cut(s)	410, 652
BstSFI	CTRYAG	5 cut(s)	204, 450, 721, 756, 915
BstSLI	GKGCMC	2 cut(s)	740, 913
BstUI	CGCG	2 cut(s)	294, 408
BstV1I	GCAGC	3 cut(s)	436, 464, 1142
BstV2I	GAAGAC	7 cut(s)	60, 84, 824, 1645, 1875, 1925, 1978
BstX2I	RGATCY	3 cut(s)	24, 745, 1792
BstYI	RGATCY	3 cut(s)	24, 745, 1792
BsuI	GTATCC	1 cut(s)	1659
BsuRI	GGCC	5 cut(s)	366, 911, 925, 1016, 1885
BtgI	CCRYGG	2 cut(s)	406, 905
BtgZI	GCGATG	2 cut(s)	275, 1634
BtsCI	GGATG	6 cut(s)	111, 610, 953, 1025, 1501, 1536
BtsI	GCAGTG	4 cut(s)	354, 753, 798, 1230
BtsIMutI	CAGTG	7 cut(s)	172, 337, 354, 740, 753, 798, 1230
BtuMI	TCGCGA	1 cut(s)	294
BveI	ACCTGC	2 cut(s)	97, 1960
Cac8I	GCNNGC	3 cut(s)	361, 740, 1480
CaiI	CAGNNNCTG	2 cut(s)	458, 748
CfoI	GCGC	1 cut(s)	892
Cfr10I	RCCGGY	1 cut(s)	656
Cfr13I	GGNCC	2 cut(s)	909, 910
Cfr42I	CCGCGG	1 cut(s)	409
CseI	GACGC	2 cut(s)	818, 1880
Csp6I	GTAC	6 cut(s)	229, 644, 1259, 1373, 1590, 1719
CspAI	ACCGGT	1 cut(s)	656
CviAII	CATG	3 cut(s)	159, 517, 1891
CviQI	GTAC	6 cut(s)	229, 644, 1259, 1373, 1590, 1719
DdeI	CTNAG	5 cut(s)	776, 842, 1040, 1451, 1742
DinI	GGCGCC	1 cut(s)	891
DriI	GACNNNNNGTC	1 cut(s)	190
EaeI	YGGCCR	3 cut(s)	364, 923, 1014
Eam1104I	CTCTTC	4 cut(s)	401, 1039, 1223, 1341
Eam1105I	GACNNNNNGTC	1 cut(s)	190
EarI	CTCTTC	4 cut(s)	401, 1039, 1223, 1341
Eco130I	CCWWGG	1 cut(s)	727
Eco24I	GRGCYC	1 cut(s)	913
Eco31I	GGTCTC	2 cut(s)	374, 1343
Eco32I	GATATC	1 cut(s)	2028
Eco57I	CTGAAG	1 cut(s)	1639
Eco91I	GGTNACC	2 cut(s)	410, 652
EcoO109I	RGGNCCY	1 cut(s)	910
EcoO65I	GGTNACC	2 cut(s)	410, 652
EcoRV	GATATC	1 cut(s)	2028
EcoT14I	CCWWGG	1 cut(s)	727
EcoT22I	ATGCAT	1 cut(s)	164
EcoT38I	GRGCYC	1 cut(s)	913
EgeI	GGCGCC	1 cut(s)	891
EheI	GGCGCC	1 cut(s)	891
ErhI	CCWWGG	1 cut(s)	727
FaeI	CATG	3 cut(s)	162, 520, 1894
FalI	AAGNNNNNCTT	2 cut(s)	52, 84
FatI	CATG	3 cut(s)	158, 516, 1890
FbaI	TGATCA	3 cut(s)	1390, 1555, 1984
FblI	GTMKAC	2 cut(s)	308, 387
Fnu4HI	GCNGC	5 cut(s)	364, 406, 450, 453, 1131
FokI	GGATG	6 cut(s)	98, 617, 940, 1032, 1508, 1543
FriOI	GRGCYC	1 cut(s)	913
Fsp4HI	GCNGC	5 cut(s)	364, 406, 450, 453, 1131
FspBI	CTAG	4 cut(s)	1001, 1479, 1676, 2001
GlaI	GCGC	1 cut(s)	891
GluI	GCNGC	5 cut(s)	364, 406, 450, 453, 1131
GsuI	CTGGAG	1 cut(s)	1437
HaeII	RGCGCY	1 cut(s)	893
HaeIII	GGCC	5 cut(s)	366, 911, 925, 1016, 1885
HapII	CCGG	2 cut(s)	657, 1017
HgaI	GACGC	2 cut(s)	818, 1880
HhaI	GCGC	1 cut(s)	892
Hin1I	GRCGYC	3 cut(s)	829, 890, 1650
Hin1II	CATG	3 cut(s)	162, 520, 1894
Hin6I	GCGC	1 cut(s)	890
HinP1I	GCGC	1 cut(s)	890
HincII	GTYRAC	1 cut(s)	309
HindII	GTYRAC	1 cut(s)	309
HindIII	AAGCTT	1 cut(s)	1295
HpaII	CCGG	2 cut(s)	657, 1017
HphI	GGTGA	9 cut(s)	86, 140, 256, 422, 555, 688, 1163, 1178, 1193
Hpy166II	GTNNAC	8 cut(s)	150, 309, 388, 576, 738, 753, 1089, 1259
Hpy188I	TCNGA	7 cut(s)	460, 801, 1043, 1522, 1648, 1803, 1845
Hpy8I	GTNNAC	8 cut(s)	150, 309, 388, 576, 738, 753, 1089, 1259
Hpy99I	CGWCG	1 cut(s)	1652
HpyAV	CCTTC	6 cut(s)	33, 595, 1163, 1334, 1763, 1875
HpyCH4III	ACNGT	7 cut(s)	176, 205, 385, 700, 735, 1236, 1857
HpyCH4IV	ACGT	4 cut(s)	615, 1085, 1650, 2044
HpyCH4V	TGCA	7 cut(s)	162, 452, 516, 738, 758, 765, 1105
HpyF10VI	GCNNNNNNNGC	4 cut(s)	522, 917, 986, 1029
HpyF3I	CTNAG	5 cut(s)	776, 842, 1040, 1451, 1742
HpySE526I	ACGT	4 cut(s)	615, 1085, 1650, 2044
Hsp92I	GRCGYC	3 cut(s)	829, 890, 1650
Hsp92II	CATG	3 cut(s)	162, 520, 1894
HspAI	GCGC	1 cut(s)	890
KasI	GGCGCC	1 cut(s)	889
Ksp22I	TGATCA	3 cut(s)	1390, 1555, 1984
KspI	CCGCGG	1 cut(s)	409
LguI	GCTCTTC	1 cut(s)	1039
LmnI	GCTCC	4 cut(s)	985, 1612, 1743, 2002
Lsp1109I	GCAGC	3 cut(s)	436, 464, 1142
LweI	GCATC	4 cut(s)	464, 1010, 1486, 1984
MaeI	CTAG	4 cut(s)	1001, 1479, 1676, 2001
MaeII	ACGT	4 cut(s)	615, 1085, 1650, 2044
MaeIII	GTNAC	9 cut(s)	128, 332, 410, 434, 442, 595, 625, 652, 1851
MflI	RGATCY	3 cut(s)	24, 745, 1792
MhlI	GDGCHC	2 cut(s)	740, 913
MluCI	AATT	7 cut(s)	284, 1106, 1265, 1515, 1581, 1723, 1757
Mly113I	GGCGCC	1 cut(s)	890
MlyI	GAGTC	5 cut(s)	164, 387, 1032, 1106, 1464
MmeI	TCCRAC	4 cut(s)	192, 1473, 1671, 1761
Mph1103I	ATGCAT	1 cut(s)	164
MseI	TTAA	7 cut(s)	180, 666, 1269, 1787, 1907, 1913, 2034
MslI	CAYNNNNRTG	3 cut(s)	698, 791, 1992
MspA1I	CMGCKG	2 cut(s)	408, 449
MspI	CCGG	2 cut(s)	657, 1017
MvnI	CGCG	2 cut(s)	294, 408
MwoI	GCNNNNNNNGC	4 cut(s)	522, 917, 986, 1029
NarI	GGCGCC	1 cut(s)	890
NheI	GCTAGC	1 cut(s)	1478
NlaIII	CATG	3 cut(s)	162, 520, 1894
NlaIV	GGNNCC	6 cut(s)	661, 891, 911, 912, 1198, 1608
NmuCI	GTSAC	4 cut(s)	128, 332, 410, 434
NruI	TCGCGA	1 cut(s)	294
NsiI	ATGCAT	1 cut(s)	164
PciSI	GCTCTTC	1 cut(s)	1039
PcsI	WCGNNNNNNNCGW	1 cut(s)	1097
PfeI	GAWTC	6 cut(s)	425, 560, 686, 1442, 1507, 1681
PflMI	CCANNNNNTGG	1 cut(s)	932
PinAI	ACCGGT	1 cut(s)	656
PkrI	GCNGC	5 cut(s)	365, 407, 451, 454, 1132
PleI	GAGTC	5 cut(s)	163, 387, 1032, 1105, 1463
PluTI	GGCGCC	1 cut(s)	893
PpsI	GAGTC	5 cut(s)	163, 387, 1032, 1105, 1463
PshAI	GACNNNNGTC	1 cut(s)	314
PshBI	ATTAAT	1 cut(s)	1907
PspEI	GGTNACC	2 cut(s)	410, 652
PspN4I	GGNNCC	6 cut(s)	661, 891, 911, 912, 1198, 1608
PspOMI	GGGCCC	1 cut(s)	909
PspPI	GGNCC	2 cut(s)	909, 910
PstI	CTGCAG	2 cut(s)	454, 760
PstNI	CAGNNNCTG	2 cut(s)	458, 748
PsuI	RGATCY	3 cut(s)	24, 745, 1792
RruI	TCGCGA	1 cut(s)	294
RsaI	GTAC	6 cut(s)	230, 645, 1260, 1374, 1591, 1720
RsaNI	GTAC	6 cut(s)	229, 644, 1259, 1373, 1590, 1719
RseI	CAYNNNNRTG	3 cut(s)	698, 791, 1992
SacII	CCGCGG	1 cut(s)	409
SalI	GTCGAC	1 cut(s)	307
SapI	GCTCTTC	1 cut(s)	1039
SaqAI	TTAA	7 cut(s)	180, 666, 1269, 1787, 1907, 1913, 2034
SatI	GCNGC	5 cut(s)	364, 406, 450, 453, 1131
Sau96I	GGNCC	2 cut(s)	909, 910
SchI	GAGTC	5 cut(s)	164, 387, 1032, 1106, 1464
SduI	GDGCHC	2 cut(s)	740, 913
SfaNI	GCATC	4 cut(s)	464, 1010, 1486, 1984
SfcI	CTRYAG	5 cut(s)	204, 450, 721, 756, 915
SfoI	GGCGCC	1 cut(s)	891
Sfr303I	CCGCGG	1 cut(s)	409
SgrBI	CCGCGG	1 cut(s)	409
SmiMI	CAYNNNNRTG	3 cut(s)	698, 791, 1992
SmlI	CTYRAG	3 cut(s)	188, 1563, 1831
SmoI	CTYRAG	3 cut(s)	188, 1563, 1831
Sse9I	AATT	7 cut(s)	284, 1106, 1265, 1515, 1581, 1723, 1757
SsiI	CCGC	5 cut(s)	267, 363, 406, 408, 447
SspDI	GGCGCC	1 cut(s)	889
SspI	AATATT	1 cut(s)	853
SspMI	CTAG	4 cut(s)	1001, 1479, 1676, 2001
StyI	CCWWGG	1 cut(s)	727
TaaI	ACNGT	7 cut(s)	176, 205, 385, 700, 735, 1236, 1857
TaiI	ACGT	4 cut(s)	618, 1088, 1653, 2047
TaqI	TCGA	6 cut(s)	308, 483, 689, 861, 1125, 1306
TasI	AATT	7 cut(s)	284, 1106, 1265, 1515, 1581, 1723, 1757
TatI	WGTACW	2 cut(s)	643, 1718
TauI	GCSGC	2 cut(s)	366, 408
TfiI	GAWTC	6 cut(s)	425, 560, 686, 1442, 1507, 1681
Tru1I	TTAA	7 cut(s)	180, 666, 1269, 1787, 1907, 1913, 2034
Tru9I	TTAA	7 cut(s)	180, 666, 1269, 1787, 1907, 1913, 2034
TscAI	CASTG	7 cut(s)	179, 337, 361, 740, 760, 798, 1230
TseFI	GTSAC	4 cut(s)	128, 332, 410, 434
TseI	GCWGC	3 cut(s)	449, 452, 1130
Tsp45I	GTSAC	4 cut(s)	128, 332, 410, 434
TspDTI	ATGAA	6 cut(s)	278, 528, 647, 1380, 1520, 1782
TspGWI	ACGGA	2 cut(s)	405, 595
TspRI	CASTG	7 cut(s)	179, 337, 361, 740, 760, 798, 1230
Van91I	CCANNNNNTGG	1 cut(s)	932
VneI	GTGCAC	1 cut(s)	736
VspI	ATTAAT	1 cut(s)	1907
XapI	RAATTY	2 cut(s)	1265, 1515
XmiI	GTMKAC	2 cut(s)	308, 387
XspI	CTAG	4 cut(s)	1001, 1479, 1676, 2001
ZraI	GACGTC	1 cut(s)	1651
Zsp2I	ATGCAT	1 cut(s)	164

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.