Rmu_sc0004574.1_g000057

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004574.1
Physical Location & Seq
Reverse (-)
178265 .. 178570
306 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004574.1_g000057.1.cds

Sequence Viewer

Length: 306 bp
atgcaggcttggaaattatggaatgaagggaaagtgttggagttgatggatccattgctgaaagattcttgcagttcaaaggagttcttgagatacattcacatcggcatactgtgtgttcaagaagacgcaaacagaaagccaaccatgtcatcggttgtattaatgttaaagagtgaaaccgtcagtctttctaaacctgaacgacctgccttcttatttacaggaagatctcccaatgatcaaattggtgctcctaattgttcagccaatggtttgacgatatccgttgatatgccacgctga

Protein Analysis

101

Amino Acids

11.28

Weight (kDa)

7.71

Isoelectric Point (pI)

47.9

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 1 cut(s) 217
AclWI GGATC 2 cut(s) 44, 57
AgsI TTSAA 2 cut(s) 78, 122
Alw21I GWGCWC 1 cut(s) 256
AlwI GGATC 2 cut(s) 44, 57
AseI ATTAAT 1 cut(s) 164
BamHI GGATCC 1 cut(s) 49
BbsI GAAGAC 1 cut(s) 132
Bbv12I GWGCWC 1 cut(s) 256
BccI CCATC 1 cut(s) 40
BclI TGATCA 1 cut(s) 241
BfuAI ACCTGC 1 cut(s) 217
BglII AGATCT 1 cut(s) 230
BmiI GGNNCC 1 cut(s) 51
BpiI GAAGAC 1 cut(s) 132
BpuEI CTTGAG 1 cut(s) 109
Bse3DI GCAATG 1 cut(s) 53
BseMI GCAATG 1 cut(s) 53
BsiHKAI GWGCWC 1 cut(s) 256
Bsp1286I GDGCHC 1 cut(s) 256
Bsp143I GATC 3 cut(s) 49, 230, 241
BspLI GGNNCC 1 cut(s) 51
BspMI ACCTGC 1 cut(s) 217
BspPI GGATC 2 cut(s) 44, 57
BsrDI GCAATG 1 cut(s) 53
BssMI GATC 3 cut(s) 49, 230, 241
Bst4CI ACNGT 2 cut(s) 114, 184
BstC8I GCNNGC 1 cut(s) 6
BstKTI GATC 3 cut(s) 52, 233, 244
BstMBI GATC 3 cut(s) 49, 230, 241
BstV2I GAAGAC 1 cut(s) 132
BstX2I RGATCY 2 cut(s) 49, 230
BstYI RGATCY 2 cut(s) 49, 230
BveI ACCTGC 1 cut(s) 217
Cac8I GCNNGC 1 cut(s) 6
CseI GACGC 1 cut(s) 137
CviAII CATG 1 cut(s) 148
CviJI RGCY 3 cut(s) 8, 142, 269
CviKI_1 RGCY 3 cut(s) 8, 142, 269
DpnI GATC 3 cut(s) 51, 232, 243
DpnII GATC 3 cut(s) 49, 230, 241
Eco32I GATATC 1 cut(s) 285
EcoRV GATATC 1 cut(s) 285
FaeI CATG 1 cut(s) 151
FaiI YATR 4 cut(s) 19, 110, 149, 296
FalI AAGNNNNNCTT 2 cut(s) 71, 103
FatI CATG 1 cut(s) 147
FbaI TGATCA 1 cut(s) 241
HgaI GACGC 1 cut(s) 137
Hin1II CATG 1 cut(s) 151
HinfI GANTC 1 cut(s) 65
Hpy188III TCNNGA 2 cut(s) 88, 122
HpyAV CCTTC 2 cut(s) 20, 223
HpyCH4III ACNGT 2 cut(s) 114, 184
HpyCH4V TGCA 2 cut(s) 4, 72
Hsp92II CATG 1 cut(s) 151
Ksp22I TGATCA 1 cut(s) 241
Kzo9I GATC 3 cut(s) 49, 230, 241
LmnI GCTCC 1 cut(s) 259
LpnPI CCDG 3 cut(s) 210, 213, 222
MalI GATC 3 cut(s) 51, 232, 243
MboI GATC 3 cut(s) 49, 230, 241
MboII GAAGA 2 cut(s) 137, 240
MflI RGATCY 2 cut(s) 49, 230
MhlI GDGCHC 1 cut(s) 256
MluCI AATT 3 cut(s) 14, 246, 259
MmeI TCCRAC 1 cut(s) 18
MseI TTAA 2 cut(s) 164, 170
NdeII GATC 3 cut(s) 49, 230, 241
NlaIII CATG 1 cut(s) 151
NlaIV GGNNCC 1 cut(s) 51
PfeI GAWTC 1 cut(s) 65
PshBI ATTAAT 1 cut(s) 164
PspN4I GGNNCC 1 cut(s) 51
PsuI RGATCY 2 cut(s) 49, 230
SaqAI TTAA 2 cut(s) 164, 170
Sau3AI GATC 3 cut(s) 49, 230, 241
SduI GDGCHC 1 cut(s) 256
SetI ASST 2 cut(s) 202, 211
SgeI CNNG 9 cut(s) 17, 21, 81, 100, 134, 160, 212, 221, 237
SmlI CTYRAG 1 cut(s) 88
SmoI CTYRAG 1 cut(s) 88
Sse9I AATT 3 cut(s) 14, 246, 259
TaaI ACNGT 2 cut(s) 114, 184
TasI AATT 3 cut(s) 14, 246, 259
TfiI GAWTC 1 cut(s) 65
Tru1I TTAA 2 cut(s) 164, 170
Tru9I TTAA 2 cut(s) 164, 170
TspDTI ATGAA 1 cut(s) 39
TspGWI ACGGA 1 cut(s) 277
VspI ATTAAT 1 cut(s) 164
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.