Basic Information

Type: gene

Biological Identity

Species

rosa_samantha

Chromosome

Chr5C

Orthogroup ID

OG0000699

Physical Location & Seq

Genomic Coordinates Reverse (-)

2430983 .. 2434423

Gene Structure 3441 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Rh5CG038400.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1521 bp

ATGGCAGAAGTGGTCCTTCTCTTCCTTTCAATGGTTGCCTTGCTCGGCTTTCCCACTACAAAAGCCGACTACATCTACCATATCTGCCCAAACACCACCGTCTTCACCCCAAACTCCACCTTCGAAACCAATCGCAACCAATTGCTGTCTAACCTTGTCTCTAATGCCACCAGTGACACCGGCTTTTACCAGGACACTGCTGGCGACCAGATCTCAAAGGAGACAGTGGACGGCCTCTTCCTCTGCCGCGGTGACAATTCCGCAGACGATTGCAAATTCTGCGTGGACACCGCGGCCTCAGAGGTTGTCCAAAGGTGTCCCGTCGAGAAACAGGTTATCATATGGTTCGACGACTGCATGGTACGCTACTCTAACGAGTCATTTCTTTCTACCGGGGCTCAGTCACCTAGCCTGTTCATGTGGAACACAGCGAATGTGACGCAGGTTGAGGATAATAGAACAGCCCAATTTAACCAGGTTCTAGCAGATACCATGAAGAGACTGGTCCGAGAGGTTATCAACGGCGCTGGTAAGTTTGGAACCCAAGAAGCAAATATTACAGGGTCATTTATGACGCTGTACACCCTCGGACAGTGCACACAGGATCTGTCCACCGCAGATTGCCAAGAGTGTCTTACAGAAGCCATAGCCGATCTTCCAGTTTGTTGTAGTGGAAAACAAGGGGGAAGAGTTCTGTATCCAAGTTGTAATATTAGGTACGACCTGTACCCCTTCTATTCAACACAGGACGATATGCCTCCTCCGCCAGCCCCTGTAGCACCTTCTCCGCCAGCCCCGGTGGCAACGGTACGTAAAGGAAAAAGTAAACTCCCATCCATAGTTATTCCTAGCATTCTTGCTCCCGTTGCTCTCTGTGTGCTAGTTGTGGTTGTGACCAGATGTTTCATTCGCAAATTAAAAAGAGCCAAACGACAACAAAATGAAGCCGAAAATGATATGACAACTGTTGAATCCTTGCAATTTGACTTGGGAACTATCGAAGCTGCCACGAAAAAGTTTTCTGCCGACAACATGTTAGGTGAAGGCGGATTTGGTCAAGTTTTCAAGGGAACACTTGATAATGGACAAGAAATAGCTGTGAAGAGGCTGTCAAAAAGCTCCGGACAAGGTGTACGGGAGTTTAAGAACGAGGTTTTATTGGTAGCAAAGCTTCAACACAGGAATCTCGTAAAGCTTCTAGGGTTTTGCTTGGGAGGAGAAGAAACACTACTTGTCTATGAATATGTGCCCAACAAAAGTCTTGATTATTTTCTATTTGAAGCCAAAAAGAGAGAACAACTGGATTGGTCAAGACGCTGCACCATAATAGGAGGAATCGCTCGAGGAATCCTCTATCTTCATGAAGATTCAAGGCTTCGAGTTATACATCGTGATTTGAAAGCTAGCAATATTTTGTTGGATGCCAGTATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTTGGAGTTGATGATCAAACGCAAGGAAGCACGAGAAGAATTGTTGGCACTTAG

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

506

Amino Acids

55.91

Weight (kDa)

5.97

Isoelectric Point (pI)

41.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	29 - 126	1.3e-24	Salt stress response/antifungal
Stress-antifung	PF01657	152 - 242	1.3e-12	Salt stress response/antifungal
PK_Tyr_Ser-Thr	PF07714	342 - 497	9.9e-34	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	342 - 495	1.6e-30	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61750
fragaria_vesca	FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica	MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica	Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis	pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis	RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata	RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora	Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii	Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa	Rorug06G0063800
rosa_samantha	Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana	Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	1 cut(s)	433
AccII	CGCG	2 cut(s)	249, 293
AccIII	TCCGGA	1 cut(s)	1121
AciI	CCGC	9 cut(s)	247, 249, 261, 291, 293, 615, 764, 788, 1047
AclWI	GGATC	1 cut(s)	612
AcsI	RAATTY	2 cut(s)	275, 1440
AfaI	GTAC	6 cut(s)	363, 581, 719, 728, 810, 1134
AfiI	CCNNNNNNNGG	1 cut(s)	31
AflIII	ACRYGT	1 cut(s)	1032
AgsI	TTSAA	8 cut(s)	30, 741, 971, 1066, 1175, 1280, 1371, 1399
AjnI	CCWGG	2 cut(s)	189, 474
AjuI	GAANNNNNNNTTGG	2 cut(s)	1035, 1067
AluBI	AGCT	6 cut(s)	1004, 1097, 1119, 1171, 1195, 1403
AluI	AGCT	6 cut(s)	1004, 1097, 1119, 1171, 1195, 1403
Alw21I	GWGCWC	1 cut(s)	599
Alw26I	GTCTC	3 cut(s)	163, 215, 493
Alw44I	GTGCAC	1 cut(s)	595
AlwI	GGATC	1 cut(s)	612
AlwNI	CAGNNNCTG	2 cut(s)	607, 773
Ama87I	CYCGRG	1 cut(s)	1341
Aor13HI	TCCGGA	1 cut(s)	1121
AoxI	GGCC	2 cut(s)	232, 294
ApaLI	GTGCAC	1 cut(s)	595
ApeKI	GCWGC	2 cut(s)	1004, 1317
ApoI	RAATTY	2 cut(s)	275, 1440
AspLEI	GCGC	1 cut(s)	527
AspS9I	GGNCC	2 cut(s)	13, 505
AsuC2I	CCSGG	2 cut(s)	394, 797
AsuHPI	GGTGA	4 cut(s)	97, 263, 396, 1052
AsuII	TTCGAA	1 cut(s)	123
AsuNHI	GCTAGC	1 cut(s)	1403
AvaI	CYCGRG	1 cut(s)	1341
AvaII	GGWCC	2 cut(s)	13, 505
BaeGI	GKGCMC	2 cut(s)	599, 1251
BanII	GRGCYC	1 cut(s)	400
BarI	GAAGNNNNNNTAC	4 cut(s)	1155, 1187, 1212, 1244
BauI	CACGAG	1 cut(s)	1498
BbsI	GAAGAC	1 cut(s)	94
Bbv12I	GWGCWC	1 cut(s)	599
BbvI	GCAGC	2 cut(s)	991, 1304
BccI	CCATC	1 cut(s)	841
BceAI	ACGGC	2 cut(s)	247, 538
BciT130I	CCWGG	2 cut(s)	191, 476
BciVI	GTATCC	1 cut(s)	708
BclI	TGATCA	1 cut(s)	1480
BcnI	CCSGG	2 cut(s)	394, 797
BcoDI	GTCTC	3 cut(s)	163, 215, 493
BfaI	CTAG	6 cut(s)	408, 482, 849, 881, 1199, 1404
BfmI	CTRYAG	1 cut(s)	774
BfoI	RGCGCY	1 cut(s)	528
BfuAI	ACCTGC	1 cut(s)	433
BfuI	GTATCC	1 cut(s)	708
BglI	GCCNNNNNGGC	1 cut(s)	800
BglII	AGATCT	1 cut(s)	210
BisI	GCNGC	4 cut(s)	247, 294, 1005, 1318
BlsI	GCNGC	4 cut(s)	248, 295, 1006, 1319
Bme1390I	CCNGG	4 cut(s)	191, 394, 476, 797
Bme18I	GGWCC	2 cut(s)	13, 505
BmeT110I	CYCGRG	1 cut(s)	1341
BmgT120I	GGNCC	2 cut(s)	13, 505
BmiI	GGNNCC	1 cut(s)	541
BmrFI	CCNGG	4 cut(s)	191, 394, 476, 797
BmsI	GCATC	1 cut(s)	1411
BmtI	GCTAGC	1 cut(s)	1407
BpiI	GAAGAC	1 cut(s)	94
BplI	GAGNNNNNCTC	2 cut(s)	1335, 1367
Bpu14I	TTCGAA	1 cut(s)	123
BpuMI	CCSGG	2 cut(s)	394, 797
BsaAI	YACGTR	1 cut(s)	812
BsaJI	CCNNGG	5 cut(s)	247, 291, 393, 586, 795
BsaWI	WCCGGW	1 cut(s)	1121
Bsc4I	CCNNNNNNNGG	1 cut(s)	31
Bse118I	RCCGGY	1 cut(s)	179
Bse1I	ACTGG	5 cut(s)	171, 507, 659, 1305, 1425
BseAI	TCCGGA	1 cut(s)	1121
BseBI	CCWGG	2 cut(s)	191, 476
BseDI	CCNNGG	5 cut(s)	247, 291, 393, 586, 795
BseGI	GGATG	2 cut(s)	833, 1426
BseLI	CCNNNNNNNGG	1 cut(s)	31
BseMII	CTCAG	2 cut(s)	312, 413
BseNI	ACTGG	5 cut(s)	171, 507, 659, 1305, 1425
BseRI	GAGGAG	2 cut(s)	750, 1230
BseSI	GKGCMC	2 cut(s)	599, 1251
BseXI	GCAGC	2 cut(s)	991, 1304
BsgI	GTGCAG	1 cut(s)	1303
Bsh1236I	CGCG	2 cut(s)	249, 293
BshFI	GGCC	2 cut(s)	234, 296
BsiHKAI	GWGCWC	1 cut(s)	599
BsiHKCI	CYCGRG	1 cut(s)	1341
BsiSI	CCGG	4 cut(s)	180, 393, 797, 1122
BslFI	GGGAC	1 cut(s)	303
BslI	CCNNNNNNNGG	1 cut(s)	31
BsmAI	GTCTC	3 cut(s)	163, 215, 493
BsmFI	GGGAC	1 cut(s)	303
BsmI	GAATGC	1 cut(s)	852
BsnI	GGCC	2 cut(s)	234, 296
BsoBI	CYCGRG	1 cut(s)	1341
Bsp119I	TTCGAA	1 cut(s)	123
Bsp1286I	GDGCHC	3 cut(s)	400, 599, 1251
Bsp13I	TCCGGA	1 cut(s)	1121
Bsp1407I	TGTACA	1 cut(s)	579
Bsp143I	GATC	4 cut(s)	210, 604, 652, 1480
BspACI	CCGC	9 cut(s)	247, 249, 261, 291, 293, 615, 764, 788, 1047
BspANI	GGCC	2 cut(s)	234, 296
BspCNI	CTCAG	2 cut(s)	311, 412
BspEI	TCCGGA	1 cut(s)	1121
BspFNI	CGCG	2 cut(s)	249, 293
BspHI	TCATGA	1 cut(s)	1360
BspLI	GGNNCC	1 cut(s)	541
BspMI	ACCTGC	1 cut(s)	433
BspOI	GCTAGC	1 cut(s)	1407
BspPI	GGATC	1 cut(s)	612
BspT104I	TTCGAA	1 cut(s)	123
BsrFI	RCCGGY	1 cut(s)	179
BsrGI	TGTACA	1 cut(s)	579
BsrI	ACTGG	5 cut(s)	171, 507, 659, 1305, 1425
BssAI	RCCGGY	1 cut(s)	179
BssECI	CCNNGG	5 cut(s)	247, 291, 393, 586, 795
BssMI	GATC	4 cut(s)	210, 604, 652, 1480
BssSI	CACGAG	1 cut(s)	1498
Bst2BI	CACGAG	1 cut(s)	1498
Bst2UI	CCWGG	2 cut(s)	191, 476
Bst4CI	ACNGT	5 cut(s)	100, 226, 594, 808, 967
Bst6I	CTCTTC	5 cut(s)	26, 242, 491, 682, 1097
BstAPI	GCANNNNNTGC	1 cut(s)	279
BstAUI	TGTACA	1 cut(s)	579
BstBAI	YACGTR	1 cut(s)	812
BstBI	TTCGAA	1 cut(s)	123
BstC8I	GCNNGC	4 cut(s)	202, 768, 792, 1405
BstDEI	CTNAG	3 cut(s)	298, 399, 1518
BstDSI	CCRYGG	2 cut(s)	247, 291
BstF5I	GGATG	2 cut(s)	833, 1426
BstFNI	CGCG	2 cut(s)	249, 293
BstH2I	RGCGCY	1 cut(s)	528
BstHHI	GCGC	1 cut(s)	527
BstKTI	GATC	4 cut(s)	213, 607, 655, 1483
BstMAI	GTCTC	3 cut(s)	163, 215, 493
BstMBI	GATC	4 cut(s)	210, 604, 652, 1480
BstMWI	GCNNNNNNNGC	6 cut(s)	279, 363, 763, 776, 800, 866
BstNI	CCWGG	2 cut(s)	191, 476
BstNSI	RCATGY	1 cut(s)	1036
BstSCI	CCNGG	4 cut(s)	189, 392, 474, 795
BstSFI	CTRYAG	1 cut(s)	774
BstSLI	GKGCMC	2 cut(s)	599, 1251
BstSNI	TACGTA	1 cut(s)	812
BstUI	CGCG	2 cut(s)	249, 293
BstV1I	GCAGC	2 cut(s)	991, 1304
BstV2I	GAAGAC	1 cut(s)	94
BstX2I	RGATCY	2 cut(s)	210, 604
BstYI	RGATCY	2 cut(s)	210, 604
BsuI	GTATCC	1 cut(s)	708
BsuRI	GGCC	2 cut(s)	234, 296
BtgI	CCRYGG	2 cut(s)	247, 291
BtsCI	GGATG	2 cut(s)	833, 1426
BtsI	GCAGTG	1 cut(s)	195
BtsIMutI	CAGTG	4 cut(s)	178, 195, 231, 599
BveI	ACCTGC	1 cut(s)	433
Cac8I	GCNNGC	4 cut(s)	202, 768, 792, 1405
CaiI	CAGNNNCTG	2 cut(s)	607, 773
CciI	TCATGA	1 cut(s)	1360
CfoI	GCGC	1 cut(s)	527
Cfr10I	RCCGGY	1 cut(s)	179
Cfr13I	GGNCC	2 cut(s)	13, 505
Cfr42I	CCGCGG	2 cut(s)	250, 294
CseI	GACGC	3 cut(s)	448, 583, 1323
CsiI	ACCWGGT	1 cut(s)	474
Csp6I	GTAC	6 cut(s)	362, 580, 718, 727, 809, 1133
CviAII	CATG	5 cut(s)	358, 418, 493, 1033, 1361
CviQI	GTAC	6 cut(s)	362, 580, 718, 727, 809, 1133
DdeI	CTNAG	3 cut(s)	298, 399, 1518
DpnI	GATC	4 cut(s)	212, 606, 654, 1482
DpnII	GATC	4 cut(s)	210, 604, 652, 1480
Eam1104I	CTCTTC	5 cut(s)	26, 242, 491, 682, 1097
EarI	CTCTTC	5 cut(s)	26, 242, 491, 682, 1097
EciI	GGCGGA	3 cut(s)	753, 777, 1062
Eco105I	TACGTA	1 cut(s)	812
Eco24I	GRGCYC	1 cut(s)	400
Eco47I	GGWCC	2 cut(s)	13, 505
Eco88I	CYCGRG	1 cut(s)	1341
EcoRII	CCWGG	2 cut(s)	189, 474
EcoT38I	GRGCYC	1 cut(s)	400
FaeI	CATG	5 cut(s)	361, 421, 496, 1036, 1364
FalI	AAGNNNNNCTT	3 cut(s)	32, 618, 650
FaqI	GGGAC	1 cut(s)	303
FatI	CATG	5 cut(s)	357, 417, 492, 1032, 1360
FauNDI	CATATG	1 cut(s)	341
FbaI	TGATCA	1 cut(s)	1480
Fnu4HI	GCNGC	4 cut(s)	247, 294, 1005, 1318
FokI	GGATG	2 cut(s)	820, 1433
FriOI	GRGCYC	1 cut(s)	400
Fsp4HI	GCNGC	4 cut(s)	247, 294, 1005, 1318
FspBI	CTAG	6 cut(s)	408, 482, 849, 881, 1199, 1404
GlaI	GCGC	1 cut(s)	526
GluI	GCNGC	4 cut(s)	247, 294, 1005, 1318
HaeII	RGCGCY	1 cut(s)	528
HaeIII	GGCC	2 cut(s)	234, 296
HapII	CCGG	4 cut(s)	180, 393, 797, 1122
HgaI	GACGC	3 cut(s)	448, 583, 1323
HhaI	GCGC	1 cut(s)	527
Hin1II	CATG	5 cut(s)	361, 421, 496, 1036, 1364
Hin6I	GCGC	1 cut(s)	525
HinP1I	GCGC	1 cut(s)	525
HindIII	AAGCTT	2 cut(s)	1169, 1193
HinfI	GANTC	7 cut(s)	377, 971, 1183, 1335, 1347, 1367, 1432
HpaII	CCGG	4 cut(s)	180, 393, 797, 1122
HphI	GGTGA	4 cut(s)	97, 263, 396, 1052
Hpy166II	GTNNAC	7 cut(s)	229, 286, 582, 597, 612, 827, 1133
Hpy188I	TCNGA	4 cut(s)	301, 509, 590, 1447
Hpy188III	TCNNGA	6 cut(s)	325, 1122, 1262, 1311, 1361, 1391
Hpy8I	GTNNAC	7 cut(s)	229, 286, 582, 597, 612, 827, 1133
Hpy99I	CGWCG	2 cut(s)	326, 353
HpyAV	CCTTC	5 cut(s)	26, 130, 742, 792, 1037
HpyCH4III	ACNGT	5 cut(s)	100, 226, 594, 808, 967
HpyCH4IV	ACGT	1 cut(s)	811
HpyCH4V	TGCA	5 cut(s)	273, 357, 597, 979, 1320
HpyF10VI	GCNNNNNNNGC	6 cut(s)	279, 363, 763, 776, 800, 866
HpyF3I	CTNAG	3 cut(s)	298, 399, 1518
HpySE526I	ACGT	1 cut(s)	811
Hsp92II	CATG	5 cut(s)	361, 421, 496, 1036, 1364
HspAI	GCGC	1 cut(s)	525
Kpn2I	TCCGGA	1 cut(s)	1121
Ksp22I	TGATCA	1 cut(s)	1480
KspI	CCGCGG	2 cut(s)	250, 294
Kzo9I	GATC	4 cut(s)	210, 604, 652, 1480
LmnI	GCTCC	2 cut(s)	865, 1124
Lsp1109I	GCAGC	2 cut(s)	991, 1304
LweI	GCATC	1 cut(s)	1411
MabI	ACCWGGT	1 cut(s)	474
MaeI	CTAG	6 cut(s)	408, 482, 849, 881, 1199, 1404
MaeII	ACGT	1 cut(s)	811
MaeIII	GTNAC	5 cut(s)	173, 251, 402, 436, 892
MalI	GATC	4 cut(s)	212, 606, 654, 1482
MboI	GATC	4 cut(s)	210, 604, 652, 1480
MfeI	CAATTG	1 cut(s)	140
MflI	RGATCY	2 cut(s)	210, 604
MhlI	GDGCHC	3 cut(s)	400, 599, 1251
MluCI	AATT	8 cut(s)	140, 256, 275, 467, 914, 980, 1440, 1506
MlyI	GAGTC	1 cut(s)	386
MmeI	TCCRAC	1 cut(s)	1398
MroI	TCCGGA	1 cut(s)	1121
MseI	TTAA	3 cut(s)	471, 917, 1143
MspA1I	CMGCKG	2 cut(s)	249, 293
MspI	CCGG	4 cut(s)	180, 393, 797, 1122
MspR9I	CCNGG	4 cut(s)	191, 394, 476, 797
MunI	CAATTG	1 cut(s)	140
Mva1269I	GAATGC	1 cut(s)	852
MvaI	CCWGG	2 cut(s)	191, 476
MvnI	CGCG	2 cut(s)	249, 293
MwoI	GCNNNNNNNGC	6 cut(s)	279, 363, 763, 776, 800, 866
NciI	CCSGG	2 cut(s)	394, 797
NdeI	CATATG	1 cut(s)	341
NdeII	GATC	4 cut(s)	210, 604, 652, 1480
NheI	GCTAGC	1 cut(s)	1403
NlaIII	CATG	5 cut(s)	361, 421, 496, 1036, 1364
NlaIV	GGNNCC	1 cut(s)	541
NmeAIII	GCCGAG	1 cut(s)	24
NmuCI	GTSAC	5 cut(s)	173, 251, 402, 436, 892
NspI	RCATGY	1 cut(s)	1036
NspV	TTCGAA	1 cut(s)	123
PaeR7I	CTCGAG	1 cut(s)	1341
PagI	TCATGA	1 cut(s)	1360
PciI	ACATGT	1 cut(s)	1032
PctI	GAATGC	1 cut(s)	852
PfeI	GAWTC	6 cut(s)	971, 1183, 1335, 1347, 1367, 1432
PkrI	GCNGC	4 cut(s)	248, 295, 1006, 1319
PleI	GAGTC	1 cut(s)	385
PpsI	GAGTC	1 cut(s)	385
Ppu21I	YACGTR	1 cut(s)	812
PscI	ACATGT	1 cut(s)	1032
Psp6I	CCWGG	2 cut(s)	189, 474
PspGI	CCWGG	2 cut(s)	189, 474
PspN4I	GGNNCC	1 cut(s)	541
PspPI	GGNCC	2 cut(s)	13, 505
PspXI	VCTCGAGB	1 cut(s)	1341
PstNI	CAGNNNCTG	2 cut(s)	607, 773
PsuI	RGATCY	2 cut(s)	210, 604
RsaI	GTAC	6 cut(s)	363, 581, 719, 728, 810, 1134
RsaNI	GTAC	6 cut(s)	362, 580, 718, 727, 809, 1133
SacII	CCGCGG	2 cut(s)	250, 294
SaqAI	TTAA	3 cut(s)	471, 917, 1143
SatI	GCNGC	4 cut(s)	247, 294, 1005, 1318
Sau3AI	GATC	4 cut(s)	210, 604, 652, 1480
Sau96I	GGNCC	2 cut(s)	13, 505
SchI	GAGTC	1 cut(s)	386
ScrFI	CCNGG	4 cut(s)	191, 394, 476, 797
SduI	GDGCHC	3 cut(s)	400, 599, 1251
SexAI	ACCWGGT	1 cut(s)	474
SfaNI	GCATC	1 cut(s)	1411
SfcI	CTRYAG	1 cut(s)	774
Sfr274I	CTCGAG	1 cut(s)	1341
Sfr303I	CCGCGG	2 cut(s)	250, 294
SfuI	TTCGAA	1 cut(s)	123
SgrBI	CCGCGG	2 cut(s)	250, 294
SinI	GGWCC	2 cut(s)	13, 505
SlaI	CTCGAG	1 cut(s)	1341
SmlI	CTYRAG	1 cut(s)	1341
SmoI	CTYRAG	1 cut(s)	1341
SnaBI	TACGTA	1 cut(s)	812
Sse9I	AATT	8 cut(s)	140, 256, 275, 467, 914, 980, 1440, 1506
SsiI	CCGC	9 cut(s)	247, 249, 261, 291, 293, 615, 764, 788, 1047
SspI	AATATT	3 cut(s)	556, 712, 1411
SspMI	CTAG	6 cut(s)	408, 482, 849, 881, 1199, 1404
StyD4I	CCNGG	4 cut(s)	189, 392, 474, 795
TaaI	ACNGT	5 cut(s)	100, 226, 594, 808, 967
TaiI	ACGT	1 cut(s)	814
TaqI	TCGA	6 cut(s)	123, 324, 348, 999, 1342, 1378
TasI	AATT	8 cut(s)	140, 256, 275, 467, 914, 980, 1440, 1506
TatI	WGTACW	1 cut(s)	579
TauI	GCSGC	2 cut(s)	249, 296
TfiI	GAWTC	6 cut(s)	971, 1183, 1335, 1347, 1367, 1432
Tru1I	TTAA	3 cut(s)	471, 917, 1143
Tru9I	TTAA	3 cut(s)	471, 917, 1143
TscAI	CASTG	4 cut(s)	178, 202, 231, 599
TseFI	GTSAC	5 cut(s)	173, 251, 402, 436, 892
TseI	GCWGC	2 cut(s)	1004, 1317
Tsp45I	GTSAC	5 cut(s)	173, 251, 402, 436, 892
TspDTI	ATGAA	8 cut(s)	406, 509, 895, 957, 1254, 1349, 1377, 1445
TspRI	CASTG	4 cut(s)	178, 202, 231, 599
VneI	GTGCAC	1 cut(s)	595
VpaK11BI	GGWCC	2 cut(s)	13, 505
XapI	RAATTY	2 cut(s)	275, 1440
XceI	RCATGY	1 cut(s)	1036
XcmI	CCANNNNNNNNNTGG	2 cut(s)	197, 499
XhoI	CTCGAG	1 cut(s)	1341
XspI	CTAG	6 cut(s)	408, 482, 849, 881, 1199, 1404

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.