RLG00000018623

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr4
Physical Location & Seq
Forward (+)
32843537 .. 32846733
3197 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000018623

Sequence Viewer

Length: 1278 bp
ATGAAGACAAGAAGTACAGAAATTCAACAAGAATTAAAAAGAGAATACCTTACTGATGAGAATGAACTAACAGGTCAAGCTGTGTTTATTTTGGTGAATCTGGAATGGAATGGAAAGGATGATGAATTGGGTGAGGGAAAAAGCAAACTCTCATCCAAAGTCATTGTTAGTATTCCTGCTCCTGTTGCTCTTTTTGTGCTAGTTGTGGTTCTGGCCGGATTCTATTTTGGCAAGAGACTCAGTAGAGCAAAACGACAAAAGAACAAAGCTGGAAATGATATAACGTCCACGGTTGAGTCCTTGCAATTTGACTTGGGAACAATCGTAGCAGCCACAAAGAAGTTTTCTGGTGATAACAAGTTGGGTGAACGTGGATTTGGTGAAGTTTTCAAGGGAACCCTTGATAATGGACAAGAAATAGCAGTGAAGAGACTATCAAAAAGTTCCGGACAAGGTGTACGAGAATTTAAGAATGAGGTTGTATTGGTTGCCAAGCTTCAACATCGAAATCTTGTCAGGCTTCTGGGATTTTGTTTGGAAGGAGAAGAGACCATACTTGTCTATGAATATGTACCCAACAAAAGTCTTGATCATTTTCTTTTTGGTATACGTAATGCGATTATAGGAGGGATCACTGGAGGACTTGTATATCTTCATGAAGATTCAAGGCTTAGAGTCATACATCGTGATTTGAAAGCTAGCAACATTTTGCTAGACGTGAATATGAATCCTAAACCTTCAGATTTTGGGCTGGCAAAAATGTTCGGAGTTGATGATCAAACTCAAGGAAGCACCAAAAGAATTGTCGGTACTTATGGCTACATGGCTCCTGAATATGCGATGAAGGGATTGTATTCTGTAAAGTCTGACGTCTTTAGCTTCGGAATACTCTTGCTTGAGATTCTAACAGGAAGAAAAAACTTTTTAGGGTTTCATCGTACAAATTGTCCATCAATGCTCATCAGTTATGCTTGGCAATTATGGAATGAAGGGAAAGTGTTGGAGTTGATGGATCCATTGCTGAAAGATTCTTGCAGTTCAAATGAGTTCTTGAGATACATTCACAGCGGGTTACTGTGTGTTCAAGAAGACGCAAACAAAAGGCCAACCATGTCATTGGTTGTATTAATGTTAAAGAGTAAATCCATCAGTCTTTCTAAACCTGAACGACCTGCCTTCTTATTTACAGGAAGATCTCCCAATGATCACAATGATCACATTGGTGCTCCTAGTTGTTCAGCCAATGGTTTGACTATATCTGTTGATGTGCCACGCTGA

Protein Analysis

426

Amino Acids

47.23

Weight (kDa)

8.96

Isoelectric Point (pI)

40.37

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 118 - 372 1.3e-40 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 118 - 372 2e-39 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AatII GACGTC 1 cut(s) 873
Acc36I ACCTGC 1 cut(s) 1180
AccI GTMKAC 1 cut(s) 607
AccIII TCCGGA 1 cut(s) 446
AciI CCGC 1 cut(s) 1068
AclWI GGATC 3 cut(s) 638, 1007, 1020
AcoI YGGCCR 1 cut(s) 213
AcsI RAATTY 2 cut(s) 21, 464
AcuI CTGAAG 1 cut(s) 723
AcyI GRCGYC 1 cut(s) 870
AfaI GTAC 5 cut(s) 16, 459, 573, 811, 940
AgsI TTSAA 7 cut(s) 26, 391, 500, 666, 694, 1041, 1085
AjiI CACGTC 1 cut(s) 718
AjuI GAANNNNNNNTTGG 2 cut(s) 360, 392
AleI CACNNNNGTG 1 cut(s) 1221
AluBI AGCT 5 cut(s) 80, 269, 496, 698, 879
AluI AGCT 5 cut(s) 80, 269, 496, 698, 879
Alw21I GWGCWC 1 cut(s) 1228
Alw26I GTCTC 3 cut(s) 229, 424, 542
AlwI GGATC 3 cut(s) 638, 1007, 1020
Aor13HI TCCGGA 1 cut(s) 446
AoxI GGCC 2 cut(s) 213, 1103
ApeKI GCWGC 1 cut(s) 329
ApoI RAATTY 2 cut(s) 21, 464
ArsI GACNNNNNNTTYG 2 cut(s) 789, 821
AseI ATTAAT 1 cut(s) 1127
AsuHPI GGTGA 5 cut(s) 106, 143, 362, 377, 392
AsuNHI GCTAGC 1 cut(s) 698
BamHI GGATCC 1 cut(s) 1012
BarI GAAGNNNNNNTAC 2 cut(s) 537, 569
BbsI GAAGAC 2 cut(s) 11, 1095
Bbv12I GWGCWC 1 cut(s) 1228
BbvI GCAGC 1 cut(s) 341
BccI CCATC 3 cut(s) 958, 1003, 1154
BclI TGATCA 4 cut(s) 589, 775, 1204, 1213
BcoDI GTCTC 3 cut(s) 229, 424, 542
BfaI CTAG 4 cut(s) 200, 699, 713, 1230
BfuAI ACCTGC 1 cut(s) 1180
BglII AGATCT 1 cut(s) 1193
BisI GCNGC 1 cut(s) 330
BlsI GCNGC 1 cut(s) 331
BmgBI CACGTC 1 cut(s) 718
BmiI GGNNCC 3 cut(s) 397, 828, 1014
BmtI GCTAGC 1 cut(s) 702
BpiI GAAGAC 2 cut(s) 11, 1095
BpmI CTGGAG 1 cut(s) 657
BpuEI CTTGAG 3 cut(s) 768, 917, 1072
BsaAI YACGTR 1 cut(s) 611
BsaHI GRCGYC 1 cut(s) 870
BsaI GGTCTC 1 cut(s) 542
BsaJI CCNNGG 1 cut(s) 288
BsaWI WCCGGW 1 cut(s) 446
BsaXI ACNNNNNCTCC 2 cut(s) 630, 660
Bse1I ACTGG 1 cut(s) 640
Bse3DI GCAATG 1 cut(s) 1016
BseAI TCCGGA 1 cut(s) 446
BseDI CCNNGG 1 cut(s) 288
BseGI GGATG 2 cut(s) 124, 152
BseMI GCAATG 1 cut(s) 1016
BseMII CTCAG 1 cut(s) 253
BseNI ACTGG 1 cut(s) 640
BseXI GCAGC 1 cut(s) 341
BshFI GGCC 2 cut(s) 215, 1105
BsiHKAI GWGCWC 1 cut(s) 1228
BsiSI CCGG 2 cut(s) 216, 447
BsmAI GTCTC 3 cut(s) 229, 424, 542
BsnI GGCC 2 cut(s) 215, 1105
Bso31I GGTCTC 1 cut(s) 542
Bsp1286I GDGCHC 1 cut(s) 1228
Bsp13I TCCGGA 1 cut(s) 446
Bsp143I GATC 7 cut(s) 589, 630, 775, 1012, 1193, 1204, 1213
BspACI CCGC 1 cut(s) 1068
BspANI GGCC 2 cut(s) 215, 1105
BspCNI CTCAG 1 cut(s) 252
BspEI TCCGGA 1 cut(s) 446
BspHI TCATGA 1 cut(s) 655
BspLI GGNNCC 3 cut(s) 397, 828, 1014
BspMI ACCTGC 1 cut(s) 1180
BspOI GCTAGC 1 cut(s) 702
BspPI GGATC 3 cut(s) 638, 1007, 1020
BspTNI GGTCTC 1 cut(s) 542
BsrDI GCAATG 1 cut(s) 1016
BsrI ACTGG 1 cut(s) 640
BssECI CCNNGG 1 cut(s) 288
BssMI GATC 7 cut(s) 589, 630, 775, 1012, 1193, 1204, 1213
BssNAI GTATAC 1 cut(s) 608
BssNI GRCGYC 1 cut(s) 870
Bst1107I GTATAC 1 cut(s) 608
Bst4CI ACNGT 2 cut(s) 292, 1077
Bst6I CTCTTC 2 cut(s) 422, 540
BstACI GRCGYC 1 cut(s) 870
BstBAI YACGTR 1 cut(s) 611
BstC8I GCNNGC 2 cut(s) 700, 753
BstDEI CTNAG 2 cut(s) 239, 671
BstDSI CCRYGG 1 cut(s) 288
BstF5I GGATG 2 cut(s) 124, 152
BstKTI GATC 7 cut(s) 592, 633, 778, 1015, 1196, 1207, 1216
BstMAI GTCTC 3 cut(s) 229, 424, 542
BstMBI GATC 7 cut(s) 589, 630, 775, 1012, 1193, 1204, 1213
BstMWI GCNNNNNNNGC 1 cut(s) 185
BstSNI TACGTA 1 cut(s) 611
BstV1I GCAGC 1 cut(s) 341
BstV2I GAAGAC 2 cut(s) 11, 1095
BstX2I RGATCY 2 cut(s) 1012, 1193
BstXI CCANNNNNNTGG 1 cut(s) 1117
BstYI RGATCY 2 cut(s) 1012, 1193
BstZ17I GTATAC 1 cut(s) 608
BsuRI GGCC 2 cut(s) 215, 1105
BtgI CCRYGG 1 cut(s) 288
BtgZI GCGATG 1 cut(s) 854
BtrI CACGTC 1 cut(s) 718
BtsCI GGATG 2 cut(s) 124, 152
BtsI GCAGTG 1 cut(s) 429
BtsIMutI CAGTG 2 cut(s) 429, 633
BveI ACCTGC 1 cut(s) 1180
Cac8I GCNNGC 2 cut(s) 700, 753
CciI TCATGA 1 cut(s) 655
CseI GACGC 1 cut(s) 1100
Csp6I GTAC 5 cut(s) 15, 458, 572, 810, 939
CviAII CATG 3 cut(s) 656, 823, 1111
CviQI GTAC 5 cut(s) 15, 458, 572, 810, 939
DdeI CTNAG 2 cut(s) 239, 671
DpnI GATC 7 cut(s) 591, 632, 777, 1014, 1195, 1206, 1215
DpnII GATC 7 cut(s) 589, 630, 775, 1012, 1193, 1204, 1213
EaeI YGGCCR 1 cut(s) 213
Eam1104I CTCTTC 2 cut(s) 422, 540
EarI CTCTTC 2 cut(s) 422, 540
Eco105I TACGTA 1 cut(s) 611
Eco31I GGTCTC 1 cut(s) 542
Eco57I CTGAAG 1 cut(s) 723
FaeI CATG 3 cut(s) 659, 826, 1114
FatI CATG 3 cut(s) 655, 822, 1110
FauI CCCGC 1 cut(s) 1061
FbaI TGATCA 4 cut(s) 589, 775, 1204, 1213
FblI GTMKAC 1 cut(s) 607
Fnu4HI GCNGC 1 cut(s) 330
FokI GGATG 2 cut(s) 131, 139
Fsp4HI GCNGC 1 cut(s) 330
FspBI CTAG 4 cut(s) 200, 699, 713, 1230
GluI GCNGC 1 cut(s) 330
GsuI CTGGAG 1 cut(s) 657
HaeIII GGCC 2 cut(s) 215, 1105
HapII CCGG 2 cut(s) 216, 447
HgaI GACGC 1 cut(s) 1100
Hin1I GRCGYC 1 cut(s) 870
Hin1II CATG 3 cut(s) 659, 826, 1114
HindIII AAGCTT 1 cut(s) 494
HinfI GANTC 9 cut(s) 97, 219, 237, 296, 662, 675, 727, 901, 1028
HpaII CCGG 2 cut(s) 216, 447
HphI GGTGA 5 cut(s) 106, 143, 362, 377, 392
Hpy166II GTNNAC 4 cut(s) 288, 368, 458, 608
Hpy188I TCNGA 4 cut(s) 742, 767, 868, 884
Hpy188III TCNNGA 8 cut(s) 101, 447, 587, 656, 686, 830, 1051, 1085
Hpy8I GTNNAC 4 cut(s) 288, 368, 458, 608
HpyAV CCTTC 5 cut(s) 533, 747, 838, 983, 1186
HpyCH4III ACNGT 2 cut(s) 292, 1077
HpyCH4IV ACGT 5 cut(s) 284, 370, 610, 717, 870
HpyCH4V TGCA 2 cut(s) 304, 1035
HpyF10VI GCNNNNNNNGC 1 cut(s) 185
HpyF3I CTNAG 2 cut(s) 239, 671
HpySE526I ACGT 5 cut(s) 284, 370, 610, 717, 870
Hsp92I GRCGYC 1 cut(s) 870
Hsp92II CATG 3 cut(s) 659, 826, 1114
Kpn2I TCCGGA 1 cut(s) 446
Ksp22I TGATCA 4 cut(s) 589, 775, 1204, 1213
Kzo9I GATC 7 cut(s) 589, 630, 775, 1012, 1193, 1204, 1213
LmnI GCTCC 3 cut(s) 184, 832, 1231
Lsp1109I GCAGC 1 cut(s) 341
MaeI CTAG 4 cut(s) 200, 699, 713, 1230
MaeII ACGT 5 cut(s) 284, 370, 610, 717, 870
MaeIII GTNAC 1 cut(s) 1071
MalI GATC 7 cut(s) 591, 632, 777, 1014, 1195, 1206, 1215
MboI GATC 7 cut(s) 589, 630, 775, 1012, 1193, 1204, 1213
MboII GAAGA 8 cut(s) 16, 439, 557, 644, 671, 924, 1100, 1203
MflI RGATCY 2 cut(s) 1012, 1193
MhlI GDGCHC 1 cut(s) 1228
MluCI AATT 8 cut(s) 21, 32, 125, 305, 464, 801, 943, 977
MlyI GAGTC 3 cut(s) 231, 305, 684
MmeI TCCRAC 1 cut(s) 981
MnlI CCTC 4 cut(s) 127, 469, 620, 632
MroI TCCGGA 1 cut(s) 446
MseI TTAA 4 cut(s) 35, 468, 1127, 1133
MslI CAYNNNNRTG 1 cut(s) 1221
MspA1I CMGCKG 1 cut(s) 1068
MspI CCGG 2 cut(s) 216, 447
MwoI GCNNNNNNNGC 1 cut(s) 185
NdeII GATC 7 cut(s) 589, 630, 775, 1012, 1193, 1204, 1213
NheI GCTAGC 1 cut(s) 698
NlaIII CATG 3 cut(s) 659, 826, 1114
NlaIV GGNNCC 3 cut(s) 397, 828, 1014
OliI CACNNNNGTG 1 cut(s) 1221
PagI TCATGA 1 cut(s) 655
PfeI GAWTC 6 cut(s) 97, 219, 662, 727, 901, 1028
PkrI GCNGC 1 cut(s) 331
PleI GAGTC 3 cut(s) 231, 304, 683
PpsI GAGTC 3 cut(s) 231, 304, 683
Ppu21I YACGTR 1 cut(s) 611
PshBI ATTAAT 1 cut(s) 1127
PspN4I GGNNCC 3 cut(s) 397, 828, 1014
PsuI RGATCY 2 cut(s) 1012, 1193
RsaI GTAC 5 cut(s) 16, 459, 573, 811, 940
RsaNI GTAC 5 cut(s) 15, 458, 572, 810, 939
RseI CAYNNNNRTG 1 cut(s) 1221
SaqAI TTAA 4 cut(s) 35, 468, 1127, 1133
SatI GCNGC 1 cut(s) 330
Sau3AI GATC 7 cut(s) 589, 630, 775, 1012, 1193, 1204, 1213
SchI GAGTC 3 cut(s) 231, 305, 684
SduI GDGCHC 1 cut(s) 1228
SmiMI CAYNNNNRTG 1 cut(s) 1221
SmlI CTYRAG 3 cut(s) 783, 896, 1051
SmoI CTYRAG 3 cut(s) 783, 896, 1051
SnaBI TACGTA 1 cut(s) 611
Sse9I AATT 8 cut(s) 21, 32, 125, 305, 464, 801, 943, 977
SsiI CCGC 1 cut(s) 1068
SspMI CTAG 4 cut(s) 200, 699, 713, 1230
TaaI ACNGT 2 cut(s) 292, 1077
TaiI ACGT 5 cut(s) 287, 373, 613, 720, 873
TaqI TCGA 1 cut(s) 505
TasI AATT 8 cut(s) 21, 32, 125, 305, 464, 801, 943, 977
TatI WGTACW 1 cut(s) 14
TfiI GAWTC 6 cut(s) 97, 219, 662, 727, 901, 1028
Tru1I TTAA 4 cut(s) 35, 468, 1127, 1133
Tru9I TTAA 4 cut(s) 35, 468, 1127, 1133
TscAI CASTG 2 cut(s) 429, 640
TseI GCWGC 1 cut(s) 329
TspRI CASTG 2 cut(s) 429, 640
VspI ATTAAT 1 cut(s) 1127
XapI RAATTY 2 cut(s) 21, 464
XmiI GTMKAC 1 cut(s) 607
XspI CTAG 4 cut(s) 200, 699, 713, 1230
ZraI GACGTC 1 cut(s) 871
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.