Basic Information

Type: gene

Biological Identity

Species

rosa_wichuraiana

Chromosome

Chr2

Orthogroup ID

OG0000699

Physical Location & Seq

Genomic Coordinates Forward (+)

34284594 .. 34287961

Gene Structure 3368 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rw2G023510.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 2007 bp

ATGCCTTGTTTTTCCTTGCAATATACGCTAATATTGATCCTCTATTTTCTTTCGACGCTGAGCTCCCTCTGCTTGTGCATTACTGTAGCATATGATAATAACTACCTCCAGCATTTCTGCAAAAACGCCACCAGTAACACCGCAAACTCCTTCCAATTCCATCGCGATCAAGTGCTGTCGACCCTTGTCTCTAACGGCACCCGTGACAATAGCTTTTATAATGCCACTGCTGGTGGCCAAATCTCAGACGAGACTGTCTACGGACTCTTCCTCTGCCGCGGTGATCTATCCAAAGATGCTTGCAGTGAGTGCGTAGCTGCTGTAGCCTCGGATGTTGTTGAACGCTGCCCAATAGGGAAAGAGGTGGTTATATGGTATGACTACTGCATGATACGCTACTCTGACTATTCATTCTTTTCTATTGATGAGGAGTCGCCTTGGGTGTTAATGTGGAACAAGGAGAATGTTACGCAGGAAGGGGATGCATTTGTAGCATCCTTTAACTACGTAGTGGGACTTACTATGAATAGGTTAGTACAAAAGGTTACCAGCGCCACAAAAAAGTTTGCGACCCAAGAATCGAACATCACAGCGTCAAATGGAAAGCTGATGTACAGCCTTGGACAGTGCAGGCAGGATCTGTCCACTGCAGATTGCAATAGATGTCTTAGTAGAGTCATAGCAAACCTTCCAAGTATTGTTACAGGCAAAACAGGGGGGCGTTATCTATCATCAAGTTGTAATTTTAGGTTCGATTTGGCACCCTTTTACACATTACAGGCGCCAGTAGAAGAGGCTCTACCTCTTCCGCGAACACTTGAAGGAAAAAGCAAACTCTCATCCAAAGTCATTGCTAGTATTCTTGCTCCTGTTGCTCTCTCTGTGCTAGTTGTGGTTCTGGCCATATGCTATTTTGGCAAGAGACTCAAAAGAGCCAAACGACAAAATAACAAAGCTGGAAATGATATGACGTCCACGGTTGAGTCCTTGCAATTTGACTTGGGAACAATCGAAGCAGCCACAAAGAGGTTTTCTGGTGATAACAAGTTAGGTGAAGGTGGATTTGGTAAAGTTTTCAAGGGAACCCTTGATAATGGACAAGAAATAGCAGTGAAGAGACTGTCAAAAAGTTCCAAACAAGGTGTACGTGAATTTAAGAATGAGGTTGTATTGGTTGCCAAGCTTCAACATCGAAATCTTGTCAGGCTTCTAGGATTTTGCTTGGAAGGAGAAGAGACCATACTTGTCTATGAATATGTGCCGAACAAAAGTCTTGATCATTTTCTTTTCGAATCCAAAAAAAGAGAGCAGCTAGATTGGTCGAGACGTAACGCGATTATAGGAGGAATCGCTAGAGGACTTGTATACCTTCATGAAGACTCAAGGCTTAGAGTCATACATCGTGATTTGAAAGCTAGCAATATCCTGCTAGATGCCAATTTGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTTGGAGTTGATGATCAAACTCAAGGAAGCACCAAAAGAATTGTCGGTACTTATGGCTACATGGCTCCAGAATATGTGATGGAGGGATTGTATTCTATAAAGTCTGACGTCTTCAGCTTCGGAATACTCTTGCTAGAAATTCTAACAGGAAGAAAAAACTTTTTAGGGTTTCATCGTACAAATTATCCACCAATTAACACTCCTCAATTATGTAAGTTTCTACTAGACGCTTGGAAATTATGGAATGAAGGGAAAGTGTTGGAGTTGATGGATCCATTGCTGAAAGATTCTTGCAGTTCAAAGGAGTTCTTGAGATACATTCACATCGGCATACTGTGTGTTCAAGAAGACGCAAACAGAAGGCCAACCATGTCATCGGTTGTATTAATGTTAAAGAGTGAAACCGTCAGTCTTTCTAAACCTGAACGACCTGCCTTCTTATTTACAGGAAGATCTCCCAATGATCAAATTGGTGCTCCTGATTGTTCAGCCAATGGTTTGACGATATCCGTTGATATGCCACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

668

Amino Acids

74.64

Weight (kDa)

8.61

Isoelectric Point (pI)

41.73

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	40 - 136	3.7e-22	Salt stress response/antifungal
Stress-antifung	PF01657	168 - 252	2.2e-09	Salt stress response/antifungal
PK_Tyr_Ser-Thr	PF07714	347 - 620	1e-49	Protein tyrosine and serine/threonine kinase
Pkinase	PF00069	347 - 620	6.8e-49	Protein kinase domain

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

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Orthologous Genes (Group: OG0000699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61750
fragaria_vesca	FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica	MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica	Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis	pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis	RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata	RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora	Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii	Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa	Rorug06G0063800
rosa_samantha	Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana	Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	219
AasI	GACNNNNNNGTC	1 cut(s)	254
AatII	GACGTC	2 cut(s)	974, 1590
Acc36I	ACCTGC	1 cut(s)	1918
AccB1I	GGYRCC	3 cut(s)	197, 760, 781
AccI	GTMKAC	3 cut(s)	179, 258, 1365
AccII	CGCG	4 cut(s)	165, 279, 811, 1334
AciI	CCGC	4 cut(s)	141, 277, 279, 809
AclWI	GGATC	4 cut(s)	31, 645, 1745, 1758
AcoI	YGGCCR	2 cut(s)	235, 900
AcsI	RAATTY	3 cut(s)	1151, 1452, 1617
AcuI	CTGAAG	1 cut(s)	1576
AcyI	GRCGYC	3 cut(s)	782, 971, 1587
AfaI	GTAC	5 cut(s)	537, 614, 1146, 1528, 1657
AfiI	CCNNNNNNNGG	1 cut(s)	1026
AgsI	TTSAA	8 cut(s)	341, 821, 1078, 1187, 1411, 1444, 1779, 1823
AjuI	GAANNNNNNNTTGG	2 cut(s)	1047, 1079
AluBI	AGCT	9 cut(s)	63, 213, 317, 607, 956, 1183, 1312, 1415, 1596
AluI	AGCT	9 cut(s)	63, 213, 317, 607, 956, 1183, 1312, 1415, 1596
Alw21I	GWGCWC	2 cut(s)	65, 1957
Alw26I	GTCTC	6 cut(s)	193, 245, 916, 1111, 1229, 1318
AlwI	GGATC	4 cut(s)	31, 645, 1745, 1758
AlwNI	CAGNNNCTG	1 cut(s)	640
AoxI	GGCC	3 cut(s)	235, 900, 1841
ApeKI	GCWGC	4 cut(s)	317, 345, 1016, 1309
ApoI	RAATTY	3 cut(s)	1151, 1452, 1617
ArsI	GACNNNNNNTTYG	2 cut(s)	1506, 1538
AseI	ATTAAT	1 cut(s)	1865
AspLEI	GCGC	2 cut(s)	554, 784
AsuHPI	GGTGA	3 cut(s)	293, 1049, 1064
AsuII	TTCGAA	1 cut(s)	1290
AsuNHI	GCTAGC	1 cut(s)	1415
BalI	TGGCCA	2 cut(s)	237, 902
BamHI	GGATCC	1 cut(s)	1750
BanI	GGYRCC	3 cut(s)	197, 760, 781
BanII	GRGCYC	1 cut(s)	65
BarI	GAAGNNNNNNTAC	4 cut(s)	783, 815, 1224, 1256
BbsI	GAAGAC	3 cut(s)	1383, 1582, 1833
Bbv12I	GWGCWC	2 cut(s)	65, 1957
BbvI	GCAGC	4 cut(s)	304, 332, 1028, 1321
BccI	CCATC	3 cut(s)	168, 1552, 1741
BceAI	ACGGC	1 cut(s)	211
BclI	TGATCA	3 cut(s)	1276, 1492, 1942
BcoDI	GTCTC	6 cut(s)	193, 245, 916, 1111, 1229, 1318
BfaI	CTAG	9 cut(s)	855, 887, 1211, 1313, 1353, 1416, 1430, 1613, 1703
BfmI	CTRYAG	3 cut(s)	84, 321, 648
BfoI	RGCGCY	2 cut(s)	555, 785
BfuAI	ACCTGC	1 cut(s)	1918
BglII	AGATCT	1 cut(s)	1931
BisI	GCNGC	5 cut(s)	277, 318, 346, 1017, 1310
BlpI	GCTNAGC	1 cut(s)	59
BlsI	GCNGC	5 cut(s)	278, 319, 347, 1018, 1311
BmiI	GGNNCC	6 cut(s)	199, 762, 783, 1084, 1545, 1752
BmsI	GCATC	4 cut(s)	286, 472, 503, 1423
BmtI	GCTAGC	1 cut(s)	1419
BoxI	GACNNNNGTC	1 cut(s)	185
BpiI	GAAGAC	3 cut(s)	1383, 1582, 1833
BpmI	CTGGAG	2 cut(s)	92, 1530
Bpu1102I	GCTNAGC	1 cut(s)	59
Bpu14I	TTCGAA	1 cut(s)	1290
BpuEI	CTTGAG	3 cut(s)	1366, 1485, 1810
BsaAI	YACGTR	2 cut(s)	508, 1148
BsaHI	GRCGYC	3 cut(s)	782, 971, 1587
BsaI	GGTCTC	1 cut(s)	1229
BsaJI	CCNNGG	5 cut(s)	277, 327, 437, 619, 975
BsaXI	ACNNNNNCTCC	2 cut(s)	1553, 1583
Bsc4I	CCNNNNNNNGG	1 cut(s)	1026
Bse1I	ACTGG	2 cut(s)	132, 785
Bse3DI	GCAATG	2 cut(s)	849, 1754
BseDI	CCNNGG	5 cut(s)	277, 327, 437, 619, 975
BseGI	GGATG	4 cut(s)	337, 487, 494, 839
BseLI	CCNNNNNNNGG	1 cut(s)	1026
BseMI	GCAATG	2 cut(s)	849, 1754
BseMII	CTCAG	2 cut(s)	50, 258
BseNI	ACTGG	2 cut(s)	132, 785
BseRI	GAGGAG	2 cut(s)	443, 1671
BseXI	GCAGC	4 cut(s)	304, 332, 1028, 1321
BsgI	GTGCAG	1 cut(s)	649
Bsh1236I	CGCG	4 cut(s)	165, 279, 811, 1334
BshFI	GGCC	3 cut(s)	237, 902, 1843
BshNI	GGYRCC	3 cut(s)	197, 760, 781
BsiHKAI	GWGCWC	2 cut(s)	65, 1957
BslFI	GGGAC	1 cut(s)	528
BslI	CCNNNNNNNGG	1 cut(s)	1026
BsmAI	GTCTC	6 cut(s)	193, 245, 916, 1111, 1229, 1318
BsmBI	CGTCTC	1 cut(s)	1318
BsmFI	GGGAC	1 cut(s)	528
BsnI	GGCC	3 cut(s)	237, 902, 1843
Bso31I	GGTCTC	1 cut(s)	1229
Bsp119I	TTCGAA	1 cut(s)	1290
Bsp1286I	GDGCHC	2 cut(s)	65, 1957
Bsp1407I	TGTACA	1 cut(s)	612
Bsp143I	GATC	9 cut(s)	36, 166, 283, 637, 1276, 1492, 1750, 1931, 1942
Bsp1720I	GCTNAGC	1 cut(s)	59
Bsp68I	TCGCGA	1 cut(s)	165
BspACI	CCGC	4 cut(s)	141, 277, 279, 809
BspANI	GGCC	3 cut(s)	237, 902, 1843
BspCNI	CTCAG	2 cut(s)	51, 257
BspFNI	CGCG	4 cut(s)	165, 279, 811, 1334
BspHI	TCATGA	1 cut(s)	1372
BspLI	GGNNCC	6 cut(s)	199, 762, 783, 1084, 1545, 1752
BspMAI	CTGCAG	1 cut(s)	652
BspMI	ACCTGC	1 cut(s)	1918
BspOI	GCTAGC	1 cut(s)	1419
BspPI	GGATC	4 cut(s)	31, 645, 1745, 1758
BspT104I	TTCGAA	1 cut(s)	1290
BspT107I	GGYRCC	3 cut(s)	197, 760, 781
BspTNI	GGTCTC	1 cut(s)	1229
BsrDI	GCAATG	2 cut(s)	849, 1754
BsrGI	TGTACA	1 cut(s)	612
BsrI	ACTGG	2 cut(s)	132, 785
BssECI	CCNNGG	5 cut(s)	277, 327, 437, 619, 975
BssMI	GATC	9 cut(s)	36, 166, 283, 637, 1276, 1492, 1750, 1931, 1942
BssNAI	GTATAC	1 cut(s)	1366
BssNI	GRCGYC	3 cut(s)	782, 971, 1587
BssT1I	CCWWGG	2 cut(s)	437, 619
Bst1107I	GTATAC	1 cut(s)	1366
Bst4CI	ACNGT	7 cut(s)	85, 256, 627, 979, 1122, 1815, 1885
Bst6I	CTCTTC	5 cut(s)	272, 786, 810, 1109, 1227
BstACI	GRCGYC	3 cut(s)	782, 971, 1587
BstAPI	GCANNNNNTGC	1 cut(s)	309
BstAUI	TGTACA	1 cut(s)	612
BstBAI	YACGTR	2 cut(s)	508, 1148
BstBI	TTCGAA	1 cut(s)	1290
BstC8I	GCNNGC	3 cut(s)	301, 632, 1417
BstDEI	CTNAG	4 cut(s)	59, 244, 668, 1388
BstDSI	CCRYGG	2 cut(s)	277, 975
BstEII	GGTNACC	1 cut(s)	544
BstF5I	GGATG	4 cut(s)	337, 487, 494, 839
BstFNI	CGCG	4 cut(s)	165, 279, 811, 1334
BstH2I	RGCGCY	2 cut(s)	555, 785
BstHHI	GCGC	2 cut(s)	554, 784
BstKTI	GATC	9 cut(s)	39, 169, 286, 640, 1279, 1495, 1753, 1934, 1945
BstMAI	GTCTC	6 cut(s)	193, 245, 916, 1111, 1229, 1318
BstMBI	GATC	9 cut(s)	36, 166, 283, 637, 1276, 1492, 1750, 1931, 1942
BstMWI	GCNNNNNNNGC	8 cut(s)	25, 69, 309, 323, 393, 491, 872, 915
BstPAI	GACNNNNGTC	1 cut(s)	185
BstPI	GGTNACC	1 cut(s)	544
BstSFI	CTRYAG	3 cut(s)	84, 321, 648
BstSNI	TACGTA	1 cut(s)	508
BstUI	CGCG	4 cut(s)	165, 279, 811, 1334
BstV1I	GCAGC	4 cut(s)	304, 332, 1028, 1321
BstV2I	GAAGAC	3 cut(s)	1383, 1582, 1833
BstX2I	RGATCY	3 cut(s)	637, 1750, 1931
BstYI	RGATCY	3 cut(s)	637, 1750, 1931
BstZ17I	GTATAC	1 cut(s)	1366
BsuRI	GGCC	3 cut(s)	237, 902, 1843
BtgI	CCRYGG	2 cut(s)	277, 975
BtgZI	GCGATG	1 cut(s)	146
BtsCI	GGATG	4 cut(s)	337, 487, 494, 839
BtsI	GCAGTG	4 cut(s)	225, 310, 645, 1116
BtsIMutI	CAGTG	5 cut(s)	225, 310, 632, 645, 1116
BtuMI	TCGCGA	1 cut(s)	165
BveI	ACCTGC	1 cut(s)	1918
Cac8I	GCNNGC	3 cut(s)	301, 632, 1417
CaiI	CAGNNNCTG	1 cut(s)	640
CciI	TCATGA	1 cut(s)	1372
CfoI	GCGC	2 cut(s)	554, 784
Cfr42I	CCGCGG	1 cut(s)	280
CseI	GACGC	4 cut(s)	64, 582, 1715, 1838
Csp6I	GTAC	5 cut(s)	536, 613, 1145, 1527, 1656
CviAII	CATG	4 cut(s)	388, 1373, 1540, 1849
CviQI	GTAC	5 cut(s)	536, 613, 1145, 1527, 1656
DdeI	CTNAG	4 cut(s)	59, 244, 668, 1388
DinI	GGCGCC	1 cut(s)	783
DpnI	GATC	9 cut(s)	38, 168, 285, 639, 1278, 1494, 1752, 1933, 1944
DpnII	GATC	9 cut(s)	36, 166, 283, 637, 1276, 1492, 1750, 1931, 1942
DrdI	GACNNNNNNGTC	1 cut(s)	254
DseDI	GACNNNNNNGTC	1 cut(s)	254
EaeI	YGGCCR	2 cut(s)	235, 900
Eam1104I	CTCTTC	5 cut(s)	272, 786, 810, 1109, 1227
EarI	CTCTTC	5 cut(s)	272, 786, 810, 1109, 1227
Ecl136II	GAGCTC	1 cut(s)	63
Eco105I	TACGTA	1 cut(s)	508
Eco130I	CCWWGG	2 cut(s)	437, 619
Eco24I	GRGCYC	1 cut(s)	65
Eco31I	GGTCTC	1 cut(s)	1229
Eco32I	GATATC	1 cut(s)	1986
Eco53kI	GAGCTC	1 cut(s)	63
Eco57I	CTGAAG	1 cut(s)	1576
Eco91I	GGTNACC	1 cut(s)	544
EcoICRI	GAGCTC	1 cut(s)	63
EcoO65I	GGTNACC	1 cut(s)	544
EcoRV	GATATC	1 cut(s)	1986
EcoT14I	CCWWGG	2 cut(s)	437, 619
EcoT22I	ATGCAT	1 cut(s)	487
EcoT38I	GRGCYC	1 cut(s)	65
EgeI	GGCGCC	1 cut(s)	783
EheI	GGCGCC	1 cut(s)	783
ErhI	CCWWGG	2 cut(s)	437, 619
Esp3I	CGTCTC	1 cut(s)	1318
FaeI	CATG	4 cut(s)	391, 1376, 1543, 1852
FalI	AAGNNNNNCTT	2 cut(s)	1772, 1804
FaqI	GGGAC	1 cut(s)	528
FatI	CATG	4 cut(s)	387, 1372, 1539, 1848
FauNDI	CATATG	2 cut(s)	91, 905
FbaI	TGATCA	3 cut(s)	1276, 1492, 1942
FblI	GTMKAC	3 cut(s)	179, 258, 1365
Fnu4HI	GCNGC	5 cut(s)	277, 318, 346, 1017, 1310
FokI	GGATG	4 cut(s)	344, 481, 494, 826
FriOI	GRGCYC	1 cut(s)	65
Fsp4HI	GCNGC	5 cut(s)	277, 318, 346, 1017, 1310
FspBI	CTAG	9 cut(s)	855, 887, 1211, 1313, 1353, 1416, 1430, 1613, 1703
GlaI	GCGC	2 cut(s)	553, 783
GluI	GCNGC	5 cut(s)	277, 318, 346, 1017, 1310
GsuI	CTGGAG	2 cut(s)	92, 1530
HaeII	RGCGCY	2 cut(s)	555, 785
HaeIII	GGCC	3 cut(s)	237, 902, 1843
HgaI	GACGC	4 cut(s)	64, 582, 1715, 1838
HhaI	GCGC	2 cut(s)	554, 784
Hin1I	GRCGYC	3 cut(s)	782, 971, 1587
Hin1II	CATG	4 cut(s)	391, 1376, 1543, 1852
Hin6I	GCGC	2 cut(s)	552, 782
HinP1I	GCGC	2 cut(s)	552, 782
HincII	GTYRAC	1 cut(s)	180
HindII	GTYRAC	1 cut(s)	180
HindIII	AAGCTT	1 cut(s)	1181
HphI	GGTGA	3 cut(s)	293, 1049, 1064
Hpy166II	GTNNAC	6 cut(s)	180, 259, 645, 975, 1145, 1366
Hpy188I	TCNGA	6 cut(s)	247, 331, 403, 1459, 1585, 1601
Hpy188III	TCNNGA	9 cut(s)	164, 1274, 1323, 1373, 1403, 1547, 1789, 1823, 1958
Hpy8I	GTNNAC	6 cut(s)	180, 259, 645, 975, 1145, 1366
Hpy99I	CGWCG	1 cut(s)	58
HpyCH4III	ACNGT	7 cut(s)	85, 256, 627, 979, 1122, 1815, 1885
HpyCH4IV	ACGT	5 cut(s)	507, 971, 1147, 1327, 1587
HpyF10VI	GCNNNNNNNGC	8 cut(s)	25, 69, 309, 323, 393, 491, 872, 915
HpyF3I	CTNAG	4 cut(s)	59, 244, 668, 1388
HpySE526I	ACGT	5 cut(s)	507, 971, 1147, 1327, 1587
Hsp92I	GRCGYC	3 cut(s)	782, 971, 1587
Hsp92II	CATG	4 cut(s)	391, 1376, 1543, 1852
HspAI	GCGC	2 cut(s)	552, 782
KasI	GGCGCC	1 cut(s)	781
Ksp22I	TGATCA	3 cut(s)	1276, 1492, 1942
KspI	CCGCGG	1 cut(s)	280
Kzo9I	GATC	9 cut(s)	36, 166, 283, 637, 1276, 1492, 1750, 1931, 1942
LmnI	GCTCC	4 cut(s)	68, 871, 1549, 1960
Lsp1109I	GCAGC	4 cut(s)	304, 332, 1028, 1321
LweI	GCATC	4 cut(s)	286, 472, 503, 1423
MaeI	CTAG	9 cut(s)	855, 887, 1211, 1313, 1353, 1416, 1430, 1613, 1703
MaeII	ACGT	5 cut(s)	507, 971, 1147, 1327, 1587
MaeIII	GTNAC	6 cut(s)	134, 203, 466, 544, 700, 1328
MalI	GATC	9 cut(s)	38, 168, 285, 639, 1278, 1494, 1752, 1933, 1944
MboI	GATC	9 cut(s)	36, 166, 283, 637, 1276, 1492, 1750, 1931, 1942
MflI	RGATCY	3 cut(s)	637, 1750, 1931
MhlI	GDGCHC	2 cut(s)	65, 1957
MlsI	TGGCCA	2 cut(s)	237, 902
MluNI	TGGCCA	2 cut(s)	237, 902
Mly113I	GGCGCC	1 cut(s)	782
MlyI	GAGTC	7 cut(s)	258, 440, 684, 918, 992, 1373, 1401
MmeI	TCCRAC	1 cut(s)	1719
Mox20I	TGGCCA	2 cut(s)	237, 902
Mph1103I	ATGCAT	1 cut(s)	487
MscI	TGGCCA	2 cut(s)	237, 902
MseI	TTAA	6 cut(s)	446, 501, 1155, 1674, 1865, 1871
Msp20I	TGGCCA	2 cut(s)	237, 902
MspA1I	CMGCKG	1 cut(s)	279
MvnI	CGCG	4 cut(s)	165, 279, 811, 1334
MwoI	GCNNNNNNNGC	8 cut(s)	25, 69, 309, 323, 393, 491, 872, 915
NarI	GGCGCC	1 cut(s)	782
NdeI	CATATG	2 cut(s)	91, 905
NdeII	GATC	9 cut(s)	36, 166, 283, 637, 1276, 1492, 1750, 1931, 1942
NheI	GCTAGC	1 cut(s)	1415
NlaIII	CATG	4 cut(s)	391, 1376, 1543, 1852
NlaIV	GGNNCC	6 cut(s)	199, 762, 783, 1084, 1545, 1752
NmuCI	GTSAC	1 cut(s)	203
NruI	TCGCGA	1 cut(s)	165
NsiI	ATGCAT	1 cut(s)	487
NspV	TTCGAA	1 cut(s)	1290
PagI	TCATGA	1 cut(s)	1372
PfeI	GAWTC	5 cut(s)	578, 1292, 1347, 1444, 1766
PkrI	GCNGC	5 cut(s)	278, 319, 347, 1018, 1311
PleI	GAGTC	7 cut(s)	258, 439, 683, 918, 991, 1373, 1400
PluTI	GGCGCC	1 cut(s)	785
PpsI	GAGTC	7 cut(s)	258, 439, 683, 918, 991, 1373, 1400
Ppu21I	YACGTR	2 cut(s)	508, 1148
PshAI	GACNNNNGTC	1 cut(s)	185
PshBI	ATTAAT	1 cut(s)	1865
PsiI	TTATAA	1 cut(s)	219
Psp124BI	GAGCTC	1 cut(s)	65
PspEI	GGTNACC	1 cut(s)	544
PspN4I	GGNNCC	6 cut(s)	199, 762, 783, 1084, 1545, 1752
PstI	CTGCAG	1 cut(s)	652
PstNI	CAGNNNCTG	1 cut(s)	640
PsuI	RGATCY	3 cut(s)	637, 1750, 1931
RruI	TCGCGA	1 cut(s)	165
RsaI	GTAC	5 cut(s)	537, 614, 1146, 1528, 1657
RsaNI	GTAC	5 cut(s)	536, 613, 1145, 1527, 1656
SacI	GAGCTC	1 cut(s)	65
SacII	CCGCGG	1 cut(s)	280
SalI	GTCGAC	1 cut(s)	178
SaqAI	TTAA	6 cut(s)	446, 501, 1155, 1674, 1865, 1871
SatI	GCNGC	5 cut(s)	277, 318, 346, 1017, 1310
Sau3AI	GATC	9 cut(s)	36, 166, 283, 637, 1276, 1492, 1750, 1931, 1942
SchI	GAGTC	7 cut(s)	258, 440, 684, 918, 992, 1373, 1401
SduI	GDGCHC	2 cut(s)	65, 1957
SfaNI	GCATC	4 cut(s)	286, 472, 503, 1423
SfcI	CTRYAG	3 cut(s)	84, 321, 648
SfoI	GGCGCC	1 cut(s)	783
Sfr303I	CCGCGG	1 cut(s)	280
SfuI	TTCGAA	1 cut(s)	1290
SgrBI	CCGCGG	1 cut(s)	280
SmlI	CTYRAG	3 cut(s)	1381, 1500, 1789
SmoI	CTYRAG	3 cut(s)	1381, 1500, 1789
SnaBI	TACGTA	1 cut(s)	508
SsiI	CCGC	4 cut(s)	141, 277, 279, 809
SspDI	GGCGCC	1 cut(s)	781
SspI	AATATT	1 cut(s)	33
SspMI	CTAG	9 cut(s)	855, 887, 1211, 1313, 1353, 1416, 1430, 1613, 1703
SstI	GAGCTC	1 cut(s)	65
StyI	CCWWGG	2 cut(s)	437, 619
TaaI	ACNGT	7 cut(s)	85, 256, 627, 979, 1122, 1815, 1885
TaiI	ACGT	5 cut(s)	510, 974, 1150, 1330, 1590
TaqI	TCGA	8 cut(s)	53, 179, 581, 753, 1011, 1192, 1290, 1322
TatI	WGTACW	2 cut(s)	535, 612
TauI	GCSGC	1 cut(s)	279
TfiI	GAWTC	5 cut(s)	578, 1292, 1347, 1444, 1766
Tru1I	TTAA	6 cut(s)	446, 501, 1155, 1674, 1865, 1871
Tru9I	TTAA	6 cut(s)	446, 501, 1155, 1674, 1865, 1871
TscAI	CASTG	5 cut(s)	232, 310, 632, 652, 1116
TseFI	GTSAC	1 cut(s)	203
TseI	GCWGC	4 cut(s)	317, 345, 1016, 1309
Tsp45I	GTSAC	1 cut(s)	203
TspDTI	ATGAA	7 cut(s)	399, 539, 1266, 1361, 1389, 1640, 1740
TspGWI	ACGGA	2 cut(s)	276, 1978
TspRI	CASTG	5 cut(s)	232, 310, 632, 652, 1116
VspI	ATTAAT	1 cut(s)	1865
XapI	RAATTY	3 cut(s)	1151, 1452, 1617
XmiI	GTMKAC	3 cut(s)	179, 258, 1365
XspI	CTAG	9 cut(s)	855, 887, 1211, 1313, 1353, 1416, 1430, 1613, 1703
ZraI	GACGTC	2 cut(s)	972, 1588
Zsp2I	ATGCAT	1 cut(s)	487

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.