Basic Information

Type: gene

Biological Identity

Species

rosa_roxburghii

Chromosome

GWHEROQ00000001

Orthogroup ID

OG0000699

Physical Location & Seq

Genomic Coordinates Reverse (-)

92401434 .. 92404353

Gene Structure 2920 bp

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UTR

Exon/CDS

Intron

Transcript / Protein ID

Rroxscaffold_1G00071500.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1851 bp

ATGGTTACCCTGCTCGGCTTTCCCACTACAAAAGCCGACTACCTCTACCACGTCTGCCCAAATACCAGCGTCTTCACCCCAAACTCCACCTTTCAAACCTATCGCACCCAATTGCTGTCTACCCTTGTCTCTAATGCCACCCGTAAGACCCGCTTTTACCAGACCTCTGCTGGCGGCCAGATCTCAACAGAGACCGTGGAGGGCCTCTTCCTCTGCCGCGGTGACGTGTCCACAGACGCTTGCGAAGACTGCGTGGACACCGCGGCCTCAGAGGTTGTCCAAAGGTGTCCCGTCGAGAAACAGGTTGTCATATGGTACGACGAATGCATGGTACGATACTCTAACCAGACATTTCTTTCTACCGGGGCTCAGTCACCTGGGGTGTTCATGTGGAACACGGCGAATGTGGAGCAGGTTGAAGATAATAGAACAGCCCAATTTAACCAGGTTCTAGCAAATACCACGAATGAGCTAGTCCTAGAGGTTATCAACGCCGCTGAAAAGTTTGCAACCCAACAAGCAATTTTTACAGATTTTATTACGCTGTACACCCTCGGACAGTGCACGCAGGATCTGTCCACCGCAGATTGCAAGGACTGTCTTAGAGGAGCCATAGCACAACTTCCGTATTGTTGTGGTGGAAAACAAGGGGGCAGAGTTCTGTATCCAAGTTGTAATATTAGGTACGAGGTGTACCCCTTCTATTCAACACAGGACGATATGCCTCCTCCGCCAGCCCCTGTAGCACCTCCTCCTCCAGCCCCTGTAGCACCTTCTCCTCCAGCCCCTGTAGCACCTCCTCCGCCAGCCCCGGTGGCAACGGTACGTAAAGGAAAAAATAAACTCTCGTCCATAGTCATTCCTAGCATTCTTGCTCCCGTTGCTCTCTGTATGCTAGTTGTGGTTGTGGCCAGATGTTTCATTCGCAAATTAAAAAGAGCCAAAGGACAACAAAATGAAGTCGAAAATGATATGACAACTGTTGAATCCTTGCAATTTGACTTGGGAACTATCGAAGATGCCACGAAAAAGTTTTCTGCCGATAACATGTTAGGTGAAGGCGGATTTGGTCAAGTTTTCAAGGGAACACTTGATAATGGACAAGAAATAGCTGTGAAGAGGCTGTCAAAAAAGCTCTGGACAAGAAGCCAAAAAAGAGAACAACTGGATTGGTCAAGACGCTGCACCATAATAGGAGGAATCGCTCGAGGAATCCTCTATCTTCATGAAGATTCTAGGCTTCGAGTTATACATCGTGATTTGAAAGCTAGCAATATCTTGTTGGATGCCAGTATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTTGGAGTTGATGATCAAACGCAAGGAAGCACGAGAAGAATTGTTGGCACTTATGGTTACATGGCTCCAGAATATGCTATGGAGGGATTGTATTCTGTAAAATCTGATGTCTTCAGCTTCGGAATACTCTTGCTTGAGATCCTAACGGGAAGAAAGAACTTTTTAGGCTTTCATCCCACAACTTCTGCACCGACTCTTCTCAGTCTTGCTTGGCAATTATGGAACGAAGGAAAAGTGTTGGAGTTGATGGATCCATTGCTGAAAGATATTTCATGCAATCCAAAGGAGTTCTTGAGATACATCCACATTGGAATGTTGTGTGTTCAAGAAGACGCAAACAATAGGCCAACCATGTCGTCGGTTGTTCTAATGTTAAAGAGTGAAAGTATCTGCCTTTCCAAACCTGAGCGACCTGCATTCTTTACAGGAAGATCTATCAATGATCACTGCCATACATTAGGGGATTTACCTAGTTGCTCTGTCAATGGTTTGACGATTTCTGATGATATCCCACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

616

Amino Acids

68.04

Weight (kDa)

6.43

Isoelectric Point (pI)

48.66

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	19 - 116	1.7e-24	Salt stress response/antifungal
Stress-antifung	PF01657	142 - 231	1.3e-11	Salt stress response/antifungal
Pkinase	PF00069	379 - 565	7.2e-27	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	384 - 566	4e-26	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

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Orthologous Genes (Group: OG0000699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61750
fragaria_vesca	FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica	MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica	Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis	pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis	RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata	RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora	Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii	Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa	Rorug06G0063800
rosa_samantha	Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana	Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
Acc36I	ACCTGC	2 cut(s)	403, 1753
AccI	GTMKAC	1 cut(s)	119
AccII	CGCG	2 cut(s)	219, 263
AclWI	GGATC	4 cut(s)	579, 1465, 1577, 1590
AcoI	YGGCCR	2 cut(s)	175, 909
AcsI	RAATTY	1 cut(s)	1305
AcuI	CTGAAG	1 cut(s)	1429
AfaI	GTAC	6 cut(s)	317, 333, 548, 686, 695, 825
AflIII	ACRYGT	2 cut(s)	225, 1047
AgsI	TTSAA	7 cut(s)	95, 419, 708, 986, 1081, 1264, 1658
AjiI	CACGTC	2 cut(s)	52, 226
AjnI	CCWGG	2 cut(s)	376, 444
AjuI	GAANNNNNNNTTGG	2 cut(s)	1050, 1082
AluBI	AGCT	5 cut(s)	472, 1112, 1135, 1268, 1449
AluI	AGCT	5 cut(s)	472, 1112, 1135, 1268, 1449
Alw21I	GWGCWC	1 cut(s)	566
Alw26I	GTCTC	2 cut(s)	133, 185
Alw44I	GTGCAC	1 cut(s)	562
AlwI	GGATC	4 cut(s)	579, 1465, 1577, 1590
AlwNI	CAGNNNCTG	4 cut(s)	574, 740, 764, 788
Ama87I	CYCGRG	1 cut(s)	1206
AoxI	GGCC	5 cut(s)	175, 202, 264, 909, 1676
ApaLI	GTGCAC	1 cut(s)	562
ApeKI	GCWGC	1 cut(s)	1182
ApoI	RAATTY	1 cut(s)	1305
AspS9I	GGNCC	1 cut(s)	202
AsuC2I	CCSGG	2 cut(s)	364, 812
AsuHPI	GGTGA	4 cut(s)	67, 233, 366, 1067
AsuNHI	GCTAGC	1 cut(s)	1268
AvaI	CYCGRG	1 cut(s)	1206
BaeGI	GKGCMC	1 cut(s)	566
BalI	TGGCCA	1 cut(s)	911
BamHI	GGATCC	1 cut(s)	1582
BanII	GRGCYC	1 cut(s)	370
BauI	CACGAG	1 cut(s)	1363
BbsI	GAAGAC	4 cut(s)	64, 252, 1435, 1668
Bbv12I	GWGCWC	1 cut(s)	566
BbvI	GCAGC	1 cut(s)	1169
BccI	CCATC	1 cut(s)	1573
BceAI	ACGGC	1 cut(s)	414
BciT130I	CCWGG	2 cut(s)	378, 446
BciVI	GTATCC	1 cut(s)	675
BclI	TGATCA	2 cut(s)	1345, 1774
BcnI	CCSGG	2 cut(s)	364, 812
BcoDI	GTCTC	2 cut(s)	133, 185
BfaI	CTAG	8 cut(s)	452, 473, 479, 864, 896, 1236, 1269, 1803
BfmI	CTRYAG	3 cut(s)	741, 765, 789
BfuAI	ACCTGC	2 cut(s)	403, 1753
BfuI	GTATCC	1 cut(s)	675
BglI	GCCNNNNNGGC	1 cut(s)	815
BglII	AGATCT	2 cut(s)	180, 1763
BisI	GCNGC	5 cut(s)	175, 217, 264, 495, 1183
BlsI	GCNGC	5 cut(s)	176, 218, 265, 496, 1184
Bme1390I	CCNGG	4 cut(s)	364, 378, 446, 812
BmeT110I	CYCGRG	1 cut(s)	1206
BmgBI	CACGTC	2 cut(s)	52, 226
BmgT120I	GGNCC	1 cut(s)	202
BmiI	GGNNCC	3 cut(s)	610, 1398, 1584
BmrFI	CCNGG	4 cut(s)	364, 378, 446, 812
BmsI	GCATC	2 cut(s)	1009, 1276
BmtI	GCTAGC	1 cut(s)	1272
BpiI	GAAGAC	4 cut(s)	64, 252, 1435, 1668
BplI	GAGNNNNNCTC	2 cut(s)	1200, 1232
BpmI	CTGGAG	3 cut(s)	741, 765, 1383
Bpu10I	CCTNAGC	1 cut(s)	1737
BpuEI	CTTGAG	2 cut(s)	1487, 1645
BpuMI	CCSGG	2 cut(s)	364, 812
BsaAI	YACGTR	1 cut(s)	827
BsaI	GGTCTC	1 cut(s)	185
BsaJI	CCNNGG	7 cut(s)	195, 217, 261, 363, 377, 553, 810
BsaXI	ACNNNNNCTCC	2 cut(s)	1406, 1436
Bse1I	ACTGG	2 cut(s)	1170, 1290
Bse3DI	GCAATG	1 cut(s)	1586
BseBI	CCWGG	2 cut(s)	378, 446
BseDI	CCNNGG	7 cut(s)	195, 217, 261, 363, 377, 553, 810
BseGI	GGATG	3 cut(s)	1291, 1504, 1632
BseMI	GCAATG	1 cut(s)	1586
BseMII	CTCAG	4 cut(s)	282, 383, 1546, 1728
BseNI	ACTGG	2 cut(s)	1170, 1290
BseRI	GAGGAG	6 cut(s)	621, 717, 741, 744, 768, 789
BseSI	GKGCMC	1 cut(s)	566
BseXI	GCAGC	1 cut(s)	1169
BsgI	GTGCAG	2 cut(s)	1168, 1503
Bsh1236I	CGCG	2 cut(s)	219, 263
BshFI	GGCC	5 cut(s)	177, 204, 266, 911, 1678
BsiHKAI	GWGCWC	1 cut(s)	566
BsiHKCI	CYCGRG	1 cut(s)	1206
BsiSI	CCGG	2 cut(s)	363, 812
BslFI	GGGAC	1 cut(s)	273
BsmAI	GTCTC	2 cut(s)	133, 185
BsmFI	GGGAC	1 cut(s)	273
BsmI	GAATGC	3 cut(s)	329, 867, 1748
BsnI	GGCC	5 cut(s)	177, 204, 266, 911, 1678
Bso31I	GGTCTC	1 cut(s)	185
BsoBI	CYCGRG	1 cut(s)	1206
Bsp1286I	GDGCHC	2 cut(s)	370, 566
Bsp1407I	TGTACA	1 cut(s)	546
Bsp143I	GATC	7 cut(s)	180, 571, 1345, 1470, 1582, 1763, 1774
BspANI	GGCC	5 cut(s)	177, 204, 266, 911, 1678
BspCNI	CTCAG	4 cut(s)	281, 382, 1545, 1729
BspFNI	CGCG	2 cut(s)	219, 263
BspHI	TCATGA	1 cut(s)	1225
BspLI	GGNNCC	3 cut(s)	610, 1398, 1584
BspMI	ACCTGC	2 cut(s)	403, 1753
BspOI	GCTAGC	1 cut(s)	1272
BspPI	GGATC	4 cut(s)	579, 1465, 1577, 1590
BspTNI	GGTCTC	1 cut(s)	185
BsrDI	GCAATG	1 cut(s)	1586
BsrGI	TGTACA	1 cut(s)	546
BsrI	ACTGG	2 cut(s)	1170, 1290
BssECI	CCNNGG	7 cut(s)	195, 217, 261, 363, 377, 553, 810
BssMI	GATC	7 cut(s)	180, 571, 1345, 1470, 1582, 1763, 1774
BssSI	CACGAG	1 cut(s)	1363
Bst2BI	CACGAG	1 cut(s)	1363
Bst2UI	CCWGG	2 cut(s)	378, 446
Bst4CI	ACNGT	5 cut(s)	196, 561, 599, 823, 982
Bst6I	CTCTTC	3 cut(s)	212, 1112, 1533
BstAUI	TGTACA	1 cut(s)	546
BstBAI	YACGTR	1 cut(s)	827
BstC8I	GCNNGC	6 cut(s)	172, 241, 566, 735, 807, 1270
BstDEI	CTNAG	5 cut(s)	268, 369, 602, 1532, 1737
BstDSI	CCRYGG	3 cut(s)	195, 217, 261
BstEII	GGTNACC	1 cut(s)	4
BstF5I	GGATG	3 cut(s)	1291, 1504, 1632
BstFNI	CGCG	2 cut(s)	219, 263
BstKTI	GATC	7 cut(s)	183, 574, 1348, 1473, 1585, 1766, 1777
BstMAI	GTCTC	2 cut(s)	133, 185
BstMBI	GATC	7 cut(s)	180, 571, 1345, 1470, 1582, 1763, 1774
BstMWI	GCNNNNNNNGC	7 cut(s)	249, 730, 743, 767, 791, 815, 881
BstNI	CCWGG	2 cut(s)	378, 446
BstNSI	RCATGY	1 cut(s)	1051
BstPI	GGTNACC	1 cut(s)	4
BstSCI	CCNGG	4 cut(s)	362, 376, 444, 810
BstSFI	CTRYAG	3 cut(s)	741, 765, 789
BstSLI	GKGCMC	1 cut(s)	566
BstSNI	TACGTA	1 cut(s)	827
BstUI	CGCG	2 cut(s)	219, 263
BstV1I	GCAGC	1 cut(s)	1169
BstV2I	GAAGAC	4 cut(s)	64, 252, 1435, 1668
BstX2I	RGATCY	5 cut(s)	180, 571, 1470, 1582, 1763
BstYI	RGATCY	5 cut(s)	180, 571, 1470, 1582, 1763
BsuI	GTATCC	1 cut(s)	675
BsuRI	GGCC	5 cut(s)	177, 204, 266, 911, 1678
BtgI	CCRYGG	3 cut(s)	195, 217, 261
BtrI	CACGTC	2 cut(s)	52, 226
BtsCI	GGATG	3 cut(s)	1291, 1504, 1632
BtsI	GCAGTG	1 cut(s)	1777
BtsIMutI	CAGTG	2 cut(s)	566, 1777
BveI	ACCTGC	2 cut(s)	403, 1753
Cac8I	GCNNGC	6 cut(s)	172, 241, 566, 735, 807, 1270
CaiI	CAGNNNCTG	4 cut(s)	574, 740, 764, 788
CciI	TCATGA	1 cut(s)	1225
Cfr13I	GGNCC	1 cut(s)	202
Cfr42I	CCGCGG	2 cut(s)	220, 264
CseI	GACGC	4 cut(s)	58, 245, 1188, 1673
CsiI	ACCWGGT	1 cut(s)	444
Csp6I	GTAC	6 cut(s)	316, 332, 547, 685, 694, 824
CviAII	CATG	7 cut(s)	328, 388, 1048, 1226, 1393, 1605, 1684
CviQI	GTAC	6 cut(s)	316, 332, 547, 685, 694, 824
DdeI	CTNAG	5 cut(s)	268, 369, 602, 1532, 1737
DpnI	GATC	7 cut(s)	182, 573, 1347, 1472, 1584, 1765, 1776
DpnII	GATC	7 cut(s)	180, 571, 1345, 1470, 1582, 1763, 1774
EaeI	YGGCCR	2 cut(s)	175, 909
Eam1104I	CTCTTC	3 cut(s)	212, 1112, 1533
EarI	CTCTTC	3 cut(s)	212, 1112, 1533
EciI	GGCGGA	3 cut(s)	720, 792, 1077
Eco105I	TACGTA	1 cut(s)	827
Eco24I	GRGCYC	1 cut(s)	370
Eco31I	GGTCTC	1 cut(s)	185
Eco32I	GATATC	1 cut(s)	1840
Eco57I	CTGAAG	1 cut(s)	1429
Eco88I	CYCGRG	1 cut(s)	1206
Eco91I	GGTNACC	1 cut(s)	4
EcoO109I	RGGNCCY	1 cut(s)	202
EcoO65I	GGTNACC	1 cut(s)	4
EcoRII	CCWGG	2 cut(s)	376, 444
EcoRV	GATATC	1 cut(s)	1840
EcoT22I	ATGCAT	1 cut(s)	329
EcoT38I	GRGCYC	1 cut(s)	370
FaeI	CATG	7 cut(s)	331, 391, 1051, 1229, 1396, 1608, 1687
FalI	AAGNNNNNCTT	4 cut(s)	137, 169, 1607, 1639
FaqI	GGGAC	1 cut(s)	273
FatI	CATG	7 cut(s)	327, 387, 1047, 1225, 1392, 1604, 1683
FauI	CCCGC	1 cut(s)	158
FauNDI	CATATG	1 cut(s)	311
FbaI	TGATCA	2 cut(s)	1345, 1774
FblI	GTMKAC	1 cut(s)	119
Fnu4HI	GCNGC	5 cut(s)	175, 217, 264, 495, 1183
FokI	GGATG	3 cut(s)	1298, 1491, 1619
FriOI	GRGCYC	1 cut(s)	370
Fsp4HI	GCNGC	5 cut(s)	175, 217, 264, 495, 1183
FspBI	CTAG	8 cut(s)	452, 473, 479, 864, 896, 1236, 1269, 1803
GluI	GCNGC	5 cut(s)	175, 217, 264, 495, 1183
GsuI	CTGGAG	3 cut(s)	741, 765, 1383
HaeIII	GGCC	5 cut(s)	177, 204, 266, 911, 1678
HapII	CCGG	2 cut(s)	363, 812
HgaI	GACGC	4 cut(s)	58, 245, 1188, 1673
Hin1II	CATG	7 cut(s)	331, 391, 1051, 1229, 1396, 1608, 1687
HinfI	GANTC	6 cut(s)	986, 1200, 1212, 1232, 1297, 1525
HpaII	CCGG	2 cut(s)	363, 812
HphI	GGTGA	4 cut(s)	67, 233, 366, 1067
Hpy166II	GTNNAC	7 cut(s)	120, 231, 256, 549, 564, 579, 694
Hpy188I	TCNGA	6 cut(s)	271, 557, 1312, 1438, 1454, 1834
Hpy188III	TCNNGA	8 cut(s)	295, 1138, 1176, 1226, 1256, 1400, 1624, 1658
Hpy8I	GTNNAC	7 cut(s)	120, 231, 256, 549, 564, 579, 694
Hpy99I	CGWCG	3 cut(s)	296, 323, 1693
HpyAV	CCTTC	4 cut(s)	709, 783, 1052, 1553
HpyCH4III	ACNGT	5 cut(s)	196, 561, 599, 823, 982
HpyCH4IV	ACGT	3 cut(s)	51, 225, 826
HpyCH4V	TGCA	9 cut(s)	327, 509, 564, 591, 994, 1185, 1520, 1608, 1748
HpyF10VI	GCNNNNNNNGC	7 cut(s)	249, 730, 743, 767, 791, 815, 881
HpyF3I	CTNAG	5 cut(s)	268, 369, 602, 1532, 1737
HpySE526I	ACGT	3 cut(s)	51, 225, 826
Hsp92II	CATG	7 cut(s)	331, 391, 1051, 1229, 1396, 1608, 1687
Ksp22I	TGATCA	2 cut(s)	1345, 1774
KspI	CCGCGG	2 cut(s)	220, 264
Kzo9I	GATC	7 cut(s)	180, 571, 1345, 1470, 1582, 1763, 1774
LmnI	GCTCC	4 cut(s)	409, 608, 880, 1402
Lsp1109I	GCAGC	1 cut(s)	1169
LweI	GCATC	2 cut(s)	1009, 1276
MabI	ACCWGGT	1 cut(s)	444
MaeI	CTAG	8 cut(s)	452, 473, 479, 864, 896, 1236, 1269, 1803
MaeII	ACGT	3 cut(s)	51, 225, 826
MaeIII	GTNAC	4 cut(s)	4, 221, 372, 1388
MalI	GATC	7 cut(s)	182, 573, 1347, 1472, 1584, 1765, 1776
MboI	GATC	7 cut(s)	180, 571, 1345, 1470, 1582, 1763, 1774
MfeI	CAATTG	1 cut(s)	110
MflI	RGATCY	5 cut(s)	180, 571, 1470, 1582, 1763
MhlI	GDGCHC	2 cut(s)	370, 566
MlsI	TGGCCA	1 cut(s)	911
MluCI	AATT	8 cut(s)	110, 437, 522, 929, 995, 1305, 1371, 1547
MluNI	TGGCCA	1 cut(s)	911
MlyI	GAGTC	1 cut(s)	1519
MmeI	TCCRAC	2 cut(s)	1263, 1551
Mox20I	TGGCCA	1 cut(s)	911
Mph1103I	ATGCAT	1 cut(s)	329
MscI	TGGCCA	1 cut(s)	911
MseI	TTAA	3 cut(s)	441, 932, 1706
MslI	CAYNNNNRTG	1 cut(s)	1643
Msp20I	TGGCCA	1 cut(s)	911
MspA1I	CMGCKG	3 cut(s)	219, 263, 497
MspI	CCGG	2 cut(s)	363, 812
MspR9I	CCNGG	4 cut(s)	364, 378, 446, 812
MunI	CAATTG	1 cut(s)	110
Mva1269I	GAATGC	3 cut(s)	329, 867, 1748
MvaI	CCWGG	2 cut(s)	378, 446
MvnI	CGCG	2 cut(s)	219, 263
MwoI	GCNNNNNNNGC	7 cut(s)	249, 730, 743, 767, 791, 815, 881
NciI	CCSGG	2 cut(s)	364, 812
NdeI	CATATG	1 cut(s)	311
NdeII	GATC	7 cut(s)	180, 571, 1345, 1470, 1582, 1763, 1774
NheI	GCTAGC	1 cut(s)	1268
NlaIII	CATG	7 cut(s)	331, 391, 1051, 1229, 1396, 1608, 1687
NlaIV	GGNNCC	3 cut(s)	610, 1398, 1584
NmuCI	GTSAC	2 cut(s)	221, 372
NsiI	ATGCAT	1 cut(s)	329
NspI	RCATGY	1 cut(s)	1051
PaeR7I	CTCGAG	1 cut(s)	1206
PagI	TCATGA	1 cut(s)	1225
PciI	ACATGT	1 cut(s)	1047
PctI	GAATGC	3 cut(s)	329, 867, 1748
PfeI	GAWTC	5 cut(s)	986, 1200, 1212, 1232, 1297
PkrI	GCNGC	5 cut(s)	176, 218, 265, 496, 1184
PleI	GAGTC	1 cut(s)	1519
PpsI	GAGTC	1 cut(s)	1519
Ppu21I	YACGTR	1 cut(s)	827
PscI	ACATGT	1 cut(s)	1047
Psp6I	CCWGG	2 cut(s)	376, 444
PspEI	GGTNACC	1 cut(s)	4
PspGI	CCWGG	2 cut(s)	376, 444
PspN4I	GGNNCC	3 cut(s)	610, 1398, 1584
PspPI	GGNCC	1 cut(s)	202
PspXI	VCTCGAGB	1 cut(s)	1206
PstNI	CAGNNNCTG	4 cut(s)	574, 740, 764, 788
PsuI	RGATCY	5 cut(s)	180, 571, 1470, 1582, 1763
RsaI	GTAC	6 cut(s)	317, 333, 548, 686, 695, 825
RsaNI	GTAC	6 cut(s)	316, 332, 547, 685, 694, 824
RseI	CAYNNNNRTG	1 cut(s)	1643
SacII	CCGCGG	2 cut(s)	220, 264
SaqAI	TTAA	3 cut(s)	441, 932, 1706
SatI	GCNGC	5 cut(s)	175, 217, 264, 495, 1183
Sau3AI	GATC	7 cut(s)	180, 571, 1345, 1470, 1582, 1763, 1774
Sau96I	GGNCC	1 cut(s)	202
SchI	GAGTC	1 cut(s)	1519
ScrFI	CCNGG	4 cut(s)	364, 378, 446, 812
SduI	GDGCHC	2 cut(s)	370, 566
SexAI	ACCWGGT	1 cut(s)	444
SfaNI	GCATC	2 cut(s)	1009, 1276
SfcI	CTRYAG	3 cut(s)	741, 765, 789
Sfr274I	CTCGAG	1 cut(s)	1206
Sfr303I	CCGCGG	2 cut(s)	220, 264
SgrBI	CCGCGG	2 cut(s)	220, 264
SlaI	CTCGAG	1 cut(s)	1206
SmiMI	CAYNNNNRTG	1 cut(s)	1643
SmlI	CTYRAG	3 cut(s)	1206, 1466, 1624
SmoI	CTYRAG	3 cut(s)	1206, 1466, 1624
SnaBI	TACGTA	1 cut(s)	827
Sse9I	AATT	8 cut(s)	110, 437, 522, 929, 995, 1305, 1371, 1547
SspI	AATATT	1 cut(s)	679
SspMI	CTAG	8 cut(s)	452, 473, 479, 864, 896, 1236, 1269, 1803
StyD4I	CCNGG	4 cut(s)	362, 376, 444, 810
TaaI	ACNGT	5 cut(s)	196, 561, 599, 823, 982
TaiI	ACGT	3 cut(s)	54, 228, 829
TaqI	TCGA	5 cut(s)	294, 963, 1014, 1207, 1243
TasI	AATT	8 cut(s)	110, 437, 522, 929, 995, 1305, 1371, 1547
TatI	WGTACW	1 cut(s)	546
TauI	GCSGC	4 cut(s)	177, 219, 266, 497
TfiI	GAWTC	5 cut(s)	986, 1200, 1212, 1232, 1297
Tru1I	TTAA	3 cut(s)	441, 932, 1706
Tru9I	TTAA	3 cut(s)	441, 932, 1706
TscAI	CASTG	2 cut(s)	566, 1784
TseFI	GTSAC	2 cut(s)	221, 372
TseI	GCWGC	1 cut(s)	1182
Tsp45I	GTSAC	2 cut(s)	221, 372
TspDTI	ATGAA	8 cut(s)	376, 910, 972, 1214, 1242, 1310, 1493, 1593
TspGWI	ACGGA	1 cut(s)	615
TspRI	CASTG	2 cut(s)	566, 1784
VneI	GTGCAC	1 cut(s)	562
XapI	RAATTY	1 cut(s)	1305
XceI	RCATGY	1 cut(s)	1051
XcmI	CCANNNNNNNNNTGG	1 cut(s)	167
XhoI	CTCGAG	1 cut(s)	1206
XmiI	GTMKAC	1 cut(s)	119
XspI	CTAG	8 cut(s)	452, 473, 479, 864, 896, 1236, 1269, 1803
Zsp2I	ATGCAT	1 cut(s)	329

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.