Basic Information

Type: gene

Biological Identity

Species

rosa_laevigata

Chromosome

Chr1

Orthogroup ID

OG0000699

Physical Location & Seq

Genomic Coordinates Forward (+)

37036305 .. 37039257

Gene Structure 2953 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

RLM00000002617

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1956 bp

ATGGCAGAAGTGATCCTTCTCTTCCTTTCAGTGGTCACCCTGCTAAACTTTCCGACTACAAAAGCCTACTACCTCTACCATATCTGCCCCAACACCACCGTCTTCACCCCAAACTCTACCTTCCAGTCCAACCTCAACCACCTCCTCTCCACTCTCTCCTCCAACGCCACGCGCACCGGCTTCTACAACACCACCTCCGGCCGTACCCCTAACGACACCATCTACGGCCTCTTCCTCTGCCGTGGTGACGTCAACACCACCACTTGCAAGTCCTGCGTGACCACCGCAACCTCCGAGGTCGTGCAGCGCTGCCCGGTCGAGAAAGAGGTTGTGATATGGTACGATGACTGCATGCTACGCTACTCCAACAAGTCCTTCTTCTCTGTCGACTCCGAGTCGCCGACGGTGTCCGTGTTGAACACCCAAAACGTCAGCATCAGCATCGAACCTAACCGGTTCAGCCAGGTTTTGGCGAGCTTGACGGAGGTGGCCACGGCGGCCTCGAACAGCGGCGATAAGTTCGCGACGAGAGAGGTGAACATCACGGGTTTGATTAGCTTGTACAGTTTGGAGCAGTGCACGCAGGACTTGTCTAGTTCTGATTGCAATTGGTGTCTTGTACGAGCCATAGCGGAGTTGCCGACTTGCTGCAGCCGGAAGCAAGGAGGACGAGTTCTGTATCCGAGTTGTAATGTTAGGTATGAACTTTATCCCTTTTATAACTCGACGTCAGCACTGGCGCCGGCGCCAGGGGCTCGGCCTCTTTCTCCGCCAAGCTCAGTGACGAAAGGAAAAAGTAAACTCTCAGCCATAGTCATTCCTAGCATTCTTGCTCCTGTTGCTCTCTCTGTGCTAGTTGTGGTTGTGGCCAGATGTTTCATTTGCAAATTAAAAAGAGCCAAACGACAACAAAATGAAGCCAAAAATGATATGACAACTGTTGAATCCTTGCAATTTGACTTGGGAACTGTCGAAGCTGCCACAAAAAAGTTTTCTGCGGATAACATGTTAGGTGAAGGCGGATTTGGTCAAGTTTTCAAGGGAACACTTGATAATGGACAAGAAATAGCTGTGAAGAGGCTGTCAAAAAGCTCTGGACAAGGTGTACGAGAGTTTAAGAACGAGGTTTTATTGGTAGCAAAGCTTCAACACAGGAATCTCGTAAAGCTTCGAGGGTTTTGCTTGGAAGGAGAAGAAACACTACTTGTCTATGAATATGTGCCCAACAAAAGTCTTGATTATTTTCTATTTGAAGCCAAAAAAAGAGAACAATTGGATTGGTCAAGACGCTGCACCATAATAGGAGGAATCGCTCGAGGAATCCTCTATCTTCATGAAGATTCTAGGCTTCGAGTTATACATCGTGATTTGAAAGCTAGCAATATCTTGTTGGATGCCAATATGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTTGGAGTTGATGATCAAACGCAAGGAAACACACGGAGAATTGTCGGCACTTATGGTTACATGGCTCCAGAATATGCTATGGGGGGATTGTATTCTGTAAAATCTGATGTCTTCAGCTTCGGAATACTCTTGCTTGAGATCCTAACGGGAAGAAAGAACATTTTAGGCTTTCATCCCACAAATTCTGCACCAACTCTTCTCAGTTTTGCTTGGCAATTATGGAATGAAGGGAAAGTGTTGGAGTTGATGGATCCAATGCTGAAAGATTCATGCAATCCAAATGAGTTCTTGAGATGCATCCACATTGGATTATTGTGTGTTCAAGAAGACGCAAATAATAGGCCAACCATGTCATCGGTTGTTCTCATGTTAAAGAGTGAAAGTATCAGCCTTTCCAAGCCTGAGCGACCTGCCTTCTTTACAGGAAGATCTATCAATGCTCACTGCCATACATTAGGGGATTTACCTAGTTGCTCTGTCAATGCTTTGACGATTTCTGATGATATCCCACGCTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

652

Amino Acids

72.03

Weight (kDa)

8.45

Isoelectric Point (pI)

43.87

Instability Index

Protein Domains (Pfam)

Domain Name	Pfam ID	Position	E-value	Description
Stress-antifung	PF01657	29 - 124	1e-28	Salt stress response/antifungal
Stress-antifung	PF01657	153 - 236	1.9e-10	Salt stress response/antifungal
Pkinase	PF00069	333 - 537	4.1e-44	Protein kinase domain
PK_Tyr_Ser-Thr	PF07714	334 - 602	1.2e-48	Protein tyrosine and serine/threonine kinase

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

Font Size (px)

Line Width

Align Labels (Cladogram)

Image

Tree File

Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61750
fragaria_vesca	FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica	MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica	Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis	pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis	RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata	RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora	Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii	Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa	Rorug06G0063800
rosa_samantha	Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana	Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AanI	TTATAA	1 cut(s)	720
AatII	GACGTC	2 cut(s)	252, 731
Acc36I	ACCTGC	1 cut(s)	1858
AccB1I	GGYRCC	2 cut(s)	739, 745
AccB7I	CCANNNNNTGG	1 cut(s)	469
AccI	GTMKAC	1 cut(s)	387
AccII	CGCG	2 cut(s)	172, 524
AciI	CCGC	7 cut(s)	285, 497, 510, 632, 770, 998, 1020
AclWI	GGATC	4 cut(s)	7, 1573, 1685, 1698
AcoI	YGGCCR	3 cut(s)	199, 489, 867
AcsI	RAATTY	2 cut(s)	1413, 1621
AcuI	CTGAAG	1 cut(s)	1537
AcyI	GRCGYC	4 cut(s)	249, 728, 740, 746
AfaI	GTAC	5 cut(s)	205, 341, 563, 621, 1107
AfeI	AGCGCT	1 cut(s)	308
AfiI	CCNNNNNNNGG	3 cut(s)	31, 469, 749
AflIII	ACRYGT	1 cut(s)	1005
AgeI	ACCGGT	1 cut(s)	453
AgsI	TTSAA	7 cut(s)	418, 944, 1039, 1148, 1253, 1372, 1763
AhdI	GACNNNNNGTC	1 cut(s)	394
AjnI	CCWGG	2 cut(s)	462, 748
AjuI	GAANNNNNNNTTGG	4 cut(s)	359, 391, 1008, 1040
AloI	GAACNNNNNNTCC	2 cut(s)	657, 689
Alw21I	GWGCWC	1 cut(s)	581
Alw44I	GTGCAC	1 cut(s)	577
AlwI	GGATC	4 cut(s)	7, 1573, 1685, 1698
Ama87I	CYCGRG	1 cut(s)	1314
Aor51HI	AGCGCT	1 cut(s)	308
AoxI	GGCC	7 cut(s)	199, 226, 489, 498, 758, 867, 1781
ApaLI	GTGCAC	1 cut(s)	577
ApeKI	GCWGC	6 cut(s)	304, 309, 648, 651, 977, 1290
ApoI	RAATTY	2 cut(s)	1413, 1621
AsiGI	ACCGGT	1 cut(s)	453
AspLEI	GCGC	4 cut(s)	174, 309, 742, 748
AsuC2I	CCSGG	1 cut(s)	314
AsuHPI	GGTGA	5 cut(s)	28, 97, 257, 547, 1025
AsuNHI	GCTAGC	1 cut(s)	1376
AvaI	CYCGRG	1 cut(s)	1314
BaeGI	GKGCMC	2 cut(s)	581, 1224
BalI	TGGCCA	2 cut(s)	491, 869
BamHI	GGATCC	1 cut(s)	1690
BanI	GGYRCC	2 cut(s)	739, 745
BanII	GRGCYC	1 cut(s)	757
BarI	GAAGNNNNNNTAC	4 cut(s)	1128, 1160, 1185, 1217
BbsI	GAAGAC	3 cut(s)	94, 1543, 1773
Bbv12I	GWGCWC	1 cut(s)	581
BbvI	GCAGC	6 cut(s)	296, 316, 635, 663, 964, 1277
BccI	CCATC	2 cut(s)	227, 1681
BceAI	ACGGC	4 cut(s)	186, 225, 241, 510
BcgI	CGANNNNNNTGC	4 cut(s)	424, 458, 1161, 1195
BciT130I	CCWGG	2 cut(s)	464, 750
BciVI	GTATCC	1 cut(s)	690
BclI	TGATCA	1 cut(s)	1453
BcnI	CCSGG	1 cut(s)	314
BfaI	CTAG	6 cut(s)	594, 822, 854, 1344, 1377, 1908
BfmI	CTRYAG	1 cut(s)	649
BfoI	RGCGCY	3 cut(s)	310, 743, 749
BfuAI	ACCTGC	1 cut(s)	1858
BfuI	GTATCC	1 cut(s)	690
BglI	GCCNNNNNGGC	1 cut(s)	497
BglII	AGATCT	1 cut(s)	1868
BisI	GCNGC	8 cut(s)	305, 310, 498, 511, 649, 652, 978, 1291
BlsI	GCNGC	8 cut(s)	306, 311, 499, 512, 650, 653, 979, 1292
Bme1390I	CCNGG	3 cut(s)	314, 464, 750
BmeRI	GACNNNNNGTC	1 cut(s)	394
BmeT110I	CYCGRG	1 cut(s)	1314
BmiI	GGNNCC	4 cut(s)	741, 747, 1506, 1692
BmrFI	CCNGG	3 cut(s)	314, 464, 750
BmsI	GCATC	5 cut(s)	444, 450, 1384, 1724, 1746
BmtI	GCTAGC	1 cut(s)	1380
BpiI	GAAGAC	3 cut(s)	94, 1543, 1773
BplI	GAGNNNNNCTC	2 cut(s)	1308, 1340
BpmI	CTGGAG	1 cut(s)	1491
Bpu10I	CCTNAGC	1 cut(s)	1842
BpuEI	CTTGAG	2 cut(s)	1595, 1750
BpuMI	CCSGG	1 cut(s)	314
BsaHI	GRCGYC	4 cut(s)	249, 728, 740, 746
BsaJI	CCNNGG	4 cut(s)	241, 294, 492, 749
BsaWI	WCCGGW	1 cut(s)	453
BsaXI	ACNNNNNCTCC	6 cut(s)	131, 161, 179, 209, 657, 687
Bsc4I	CCNNNNNNNGG	3 cut(s)	31, 469, 749
Bse118I	RCCGGY	3 cut(s)	176, 453, 742
Bse1I	ACTGG	2 cut(s)	124, 741
BseBI	CCWGG	2 cut(s)	464, 750
BseDI	CCNNGG	4 cut(s)	241, 294, 492, 749
BseGI	GGATG	3 cut(s)	1399, 1612, 1737
BseLI	CCNNNNNNNGG	3 cut(s)	31, 469, 749
BseMII	CTCAG	4 cut(s)	792, 819, 1654, 1833
BseNI	ACTGG	2 cut(s)	124, 741
BseRI	GAGGAG	2 cut(s)	134, 148
BseSI	GKGCMC	2 cut(s)	581, 1224
BseX3I	CGGCCG	1 cut(s)	199
BseXI	GCAGC	6 cut(s)	296, 316, 635, 663, 964, 1277
BsgI	GTGCAG	3 cut(s)	323, 1276, 1611
Bsh1236I	CGCG	2 cut(s)	172, 524
Bsh1285I	CGRYCG	2 cut(s)	202, 318
BshFI	GGCC	7 cut(s)	201, 228, 491, 500, 760, 869, 1783
BshNI	GGYRCC	2 cut(s)	739, 745
BshTI	ACCGGT	1 cut(s)	453
BsiEI	CGRYCG	2 cut(s)	202, 318
BsiHKAI	GWGCWC	1 cut(s)	581
BsiHKCI	CYCGRG	1 cut(s)	1314
BsiSI	CCGG	6 cut(s)	177, 198, 314, 454, 655, 743
BslI	CCNNNNNNNGG	3 cut(s)	31, 469, 749
BsmI	GAATGC	1 cut(s)	825
BsnI	GGCC	7 cut(s)	201, 228, 491, 500, 760, 869, 1783
BsoBI	CYCGRG	1 cut(s)	1314
Bsp1286I	GDGCHC	3 cut(s)	581, 757, 1224
Bsp1407I	TGTACA	1 cut(s)	561
Bsp143I	GATC	5 cut(s)	12, 1453, 1578, 1690, 1868
Bsp68I	TCGCGA	1 cut(s)	524
BspACI	CCGC	7 cut(s)	285, 497, 510, 632, 770, 998, 1020
BspANI	GGCC	7 cut(s)	201, 228, 491, 500, 760, 869, 1783
BspCNI	CTCAG	4 cut(s)	791, 818, 1653, 1834
BspFNI	CGCG	2 cut(s)	172, 524
BspHI	TCATGA	1 cut(s)	1333
BspLI	GGNNCC	4 cut(s)	741, 747, 1506, 1692
BspMAI	CTGCAG	1 cut(s)	653
BspMI	ACCTGC	1 cut(s)	1858
BspOI	GCTAGC	1 cut(s)	1380
BspPI	GGATC	4 cut(s)	7, 1573, 1685, 1698
BspT107I	GGYRCC	2 cut(s)	739, 745
BsrFI	RCCGGY	3 cut(s)	176, 453, 742
BsrGI	TGTACA	1 cut(s)	561
BsrI	ACTGG	2 cut(s)	124, 741
BssAI	RCCGGY	3 cut(s)	176, 453, 742
BssECI	CCNNGG	4 cut(s)	241, 294, 492, 749
BssMI	GATC	5 cut(s)	12, 1453, 1578, 1690, 1868
BssNI	GRCGYC	4 cut(s)	249, 728, 740, 746
Bst2UI	CCWGG	2 cut(s)	464, 750
Bst4CI	ACNGT	5 cut(s)	100, 406, 566, 940, 970
Bst6I	CTCTTC	4 cut(s)	26, 236, 1070, 1641
BstACI	GRCGYC	4 cut(s)	249, 728, 740, 746
BstAPI	GCANNNNNTGC	1 cut(s)	273
BstAUI	TGTACA	1 cut(s)	561
BstC8I	GCNNGC	5 cut(s)	353, 475, 581, 744, 1378
BstDEI	CTNAG	4 cut(s)	778, 805, 1640, 1842
BstDSI	CCRYGG	2 cut(s)	241, 492
BstEII	GGTNACC	1 cut(s)	34
BstF5I	GGATG	3 cut(s)	1399, 1612, 1737
BstFNI	CGCG	2 cut(s)	172, 524
BstH2I	RGCGCY	3 cut(s)	310, 743, 749
BstHHI	GCGC	4 cut(s)	174, 309, 742, 748
BstKTI	GATC	5 cut(s)	15, 1456, 1581, 1693, 1871
BstMBI	GATC	5 cut(s)	12, 1453, 1578, 1690, 1868
BstMCI	CGRYCG	2 cut(s)	202, 318
BstMWI	GCNNNNNNNGC	6 cut(s)	273, 357, 497, 580, 752, 839
BstNI	CCWGG	2 cut(s)	464, 750
BstNSI	RCATGY	2 cut(s)	355, 1009
BstPI	GGTNACC	1 cut(s)	34
BstSCI	CCNGG	3 cut(s)	312, 462, 748
BstSFI	CTRYAG	1 cut(s)	649
BstSLI	GKGCMC	2 cut(s)	581, 1224
BstUI	CGCG	2 cut(s)	172, 524
BstV1I	GCAGC	6 cut(s)	296, 316, 635, 663, 964, 1277
BstV2I	GAAGAC	3 cut(s)	94, 1543, 1773
BstX2I	RGATCY	3 cut(s)	1578, 1690, 1868
BstYI	RGATCY	3 cut(s)	1578, 1690, 1868
BstZI	CGGCCG	1 cut(s)	199
BsuI	GTATCC	1 cut(s)	690
BsuRI	GGCC	7 cut(s)	201, 228, 491, 500, 760, 869, 1783
BtgI	CCRYGG	2 cut(s)	241, 492
BtsCI	GGATG	3 cut(s)	1399, 1612, 1737
BtsI	GCAGTG	2 cut(s)	581, 1882
BtsIMutI	CAGTG	5 cut(s)	36, 581, 734, 786, 1882
BtuMI	TCGCGA	1 cut(s)	524
BveI	ACCTGC	1 cut(s)	1858
Cac8I	GCNNGC	5 cut(s)	353, 475, 581, 744, 1378
CciI	TCATGA	1 cut(s)	1333
CfoI	GCGC	4 cut(s)	174, 309, 742, 748
Cfr10I	RCCGGY	3 cut(s)	176, 453, 742
CseI	GACGC	2 cut(s)	1296, 1778
Csp6I	GTAC	5 cut(s)	204, 340, 562, 620, 1106
CspAI	ACCGGT	1 cut(s)	453
CviAII	CATG	7 cut(s)	352, 1006, 1334, 1501, 1710, 1789, 1807
CviQI	GTAC	5 cut(s)	204, 340, 562, 620, 1106
DdeI	CTNAG	4 cut(s)	778, 805, 1640, 1842
DinI	GGCGCC	2 cut(s)	741, 747
DpnI	GATC	5 cut(s)	14, 1455, 1580, 1692, 1870
DpnII	GATC	5 cut(s)	12, 1453, 1578, 1690, 1868
DriI	GACNNNNNGTC	1 cut(s)	394
EaeI	YGGCCR	3 cut(s)	199, 489, 867
EagI	CGGCCG	1 cut(s)	199
Eam1104I	CTCTTC	4 cut(s)	26, 236, 1070, 1641
Eam1105I	GACNNNNNGTC	1 cut(s)	394
EarI	CTCTTC	4 cut(s)	26, 236, 1070, 1641
EciI	GGCGGA	2 cut(s)	759, 1035
EclXI	CGGCCG	1 cut(s)	199
Eco24I	GRGCYC	1 cut(s)	757
Eco32I	GATATC	1 cut(s)	1945
Eco47III	AGCGCT	1 cut(s)	308
Eco52I	CGGCCG	1 cut(s)	199
Eco57I	CTGAAG	1 cut(s)	1537
Eco88I	CYCGRG	1 cut(s)	1314
Eco91I	GGTNACC	1 cut(s)	34
EcoO65I	GGTNACC	1 cut(s)	34
EcoRII	CCWGG	2 cut(s)	462, 748
EcoRV	GATATC	1 cut(s)	1945
EcoT22I	ATGCAT	1 cut(s)	1739
EcoT38I	GRGCYC	1 cut(s)	757
EgeI	GGCGCC	2 cut(s)	741, 747
EheI	GGCGCC	2 cut(s)	741, 747
FaeI	CATG	7 cut(s)	355, 1009, 1337, 1504, 1713, 1792, 1810
FalI	AAGNNNNNCTT	3 cut(s)	32, 362, 394
FatI	CATG	7 cut(s)	351, 1005, 1333, 1500, 1709, 1788, 1806
FbaI	TGATCA	1 cut(s)	1453
FblI	GTMKAC	1 cut(s)	387
Fnu4HI	GCNGC	8 cut(s)	305, 310, 498, 511, 649, 652, 978, 1291
FokI	GGATG	3 cut(s)	1406, 1599, 1724
FriOI	GRGCYC	1 cut(s)	757
Fsp4HI	GCNGC	8 cut(s)	305, 310, 498, 511, 649, 652, 978, 1291
FspBI	CTAG	6 cut(s)	594, 822, 854, 1344, 1377, 1908
GlaI	GCGC	4 cut(s)	173, 308, 741, 747
GluI	GCNGC	8 cut(s)	305, 310, 498, 511, 649, 652, 978, 1291
GsuI	CTGGAG	1 cut(s)	1491
HaeII	RGCGCY	3 cut(s)	310, 743, 749
HaeIII	GGCC	7 cut(s)	201, 228, 491, 500, 760, 869, 1783
HapII	CCGG	6 cut(s)	177, 198, 314, 454, 655, 743
HgaI	GACGC	2 cut(s)	1296, 1778
HhaI	GCGC	4 cut(s)	174, 309, 742, 748
Hin1I	GRCGYC	4 cut(s)	249, 728, 740, 746
Hin1II	CATG	7 cut(s)	355, 1009, 1337, 1504, 1713, 1792, 1810
Hin6I	GCGC	4 cut(s)	172, 307, 740, 746
HinP1I	GCGC	4 cut(s)	172, 307, 740, 746
HincII	GTYRAC	2 cut(s)	253, 388
HindII	GTYRAC	2 cut(s)	253, 388
HindIII	AAGCTT	2 cut(s)	1142, 1166
HinfI	GANTC	9 cut(s)	389, 395, 944, 1156, 1308, 1320, 1340, 1405, 1706
HpaII	CCGG	6 cut(s)	177, 198, 314, 454, 655, 743
HphI	GGTGA	5 cut(s)	28, 97, 257, 547, 1025
Hpy166II	GTNNAC	6 cut(s)	253, 388, 538, 579, 800, 1106
Hpy188I	TCNGA	9 cut(s)	54, 295, 394, 601, 684, 1420, 1546, 1562, 1939
Hpy8I	GTNNAC	6 cut(s)	253, 388, 538, 579, 800, 1106
Hpy99I	CGWCG	3 cut(s)	406, 529, 730
HpyAV	CCTTC	7 cut(s)	26, 130, 385, 1010, 1181, 1661, 1864
HpyCH4III	ACNGT	5 cut(s)	100, 406, 566, 940, 970
HpyCH4IV	ACGT	3 cut(s)	249, 429, 728
HpyF10VI	GCNNNNNNNGC	6 cut(s)	273, 357, 497, 580, 752, 839
HpyF3I	CTNAG	4 cut(s)	778, 805, 1640, 1842
HpySE526I	ACGT	3 cut(s)	249, 429, 728
Hsp92I	GRCGYC	4 cut(s)	249, 728, 740, 746
Hsp92II	CATG	7 cut(s)	355, 1009, 1337, 1504, 1713, 1792, 1810
HspAI	GCGC	4 cut(s)	172, 307, 740, 746
KasI	GGCGCC	2 cut(s)	739, 745
KroI	GCCGGC	1 cut(s)	742
KroNI	GCCGGC	1 cut(s)	744
Ksp22I	TGATCA	1 cut(s)	1453
Kzo9I	GATC	5 cut(s)	12, 1453, 1578, 1690, 1868
LmnI	GCTCC	3 cut(s)	571, 838, 1510
Lsp1109I	GCAGC	6 cut(s)	296, 316, 635, 663, 964, 1277
LweI	GCATC	5 cut(s)	444, 450, 1384, 1724, 1746
MaeI	CTAG	6 cut(s)	594, 822, 854, 1344, 1377, 1908
MaeII	ACGT	3 cut(s)	249, 429, 728
MaeIII	GTNAC	5 cut(s)	34, 245, 277, 781, 1496
MalI	GATC	5 cut(s)	14, 1455, 1580, 1692, 1870
MboI	GATC	5 cut(s)	12, 1453, 1578, 1690, 1868
MfeI	CAATTG	2 cut(s)	607, 1271
MflI	RGATCY	3 cut(s)	1578, 1690, 1868
MhlI	GDGCHC	3 cut(s)	581, 757, 1224
MlsI	TGGCCA	2 cut(s)	491, 869
MluCI	AATT	8 cut(s)	607, 887, 953, 1271, 1413, 1479, 1621, 1655
MluNI	TGGCCA	2 cut(s)	491, 869
Mly113I	GGCGCC	2 cut(s)	740, 746
MlyI	GAGTC	2 cut(s)	383, 404
MmeI	TCCRAC	6 cut(s)	77, 153, 186, 390, 1371, 1659
Mox20I	TGGCCA	2 cut(s)	491, 869
Mph1103I	ATGCAT	1 cut(s)	1739
MreI	CGCCGGCG	1 cut(s)	742
MroNI	GCCGGC	1 cut(s)	742
MscI	TGGCCA	2 cut(s)	491, 869
MseI	TTAA	3 cut(s)	890, 1116, 1811
Msp20I	TGGCCA	2 cut(s)	491, 869
MspA1I	CMGCKG	1 cut(s)	510
MspI	CCGG	6 cut(s)	177, 198, 314, 454, 655, 743
MspR9I	CCNGG	3 cut(s)	314, 464, 750
MunI	CAATTG	2 cut(s)	607, 1271
Mva1269I	GAATGC	1 cut(s)	825
MvaI	CCWGG	2 cut(s)	464, 750
MvnI	CGCG	2 cut(s)	172, 524
MwoI	GCNNNNNNNGC	6 cut(s)	273, 357, 497, 580, 752, 839
NaeI	GCCGGC	1 cut(s)	744
NarI	GGCGCC	2 cut(s)	740, 746
NciI	CCSGG	1 cut(s)	314
NdeII	GATC	5 cut(s)	12, 1453, 1578, 1690, 1868
NgoMIV	GCCGGC	1 cut(s)	742
NheI	GCTAGC	1 cut(s)	1376
NlaIII	CATG	7 cut(s)	355, 1009, 1337, 1504, 1713, 1792, 1810
NlaIV	GGNNCC	4 cut(s)	741, 747, 1506, 1692
NmeAIII	GCCGAG	1 cut(s)	736
NmuCI	GTSAC	4 cut(s)	34, 245, 277, 781
NruI	TCGCGA	1 cut(s)	524
NsiI	ATGCAT	1 cut(s)	1739
NspI	RCATGY	2 cut(s)	355, 1009
PaeI	GCATGC	1 cut(s)	355
PaeR7I	CTCGAG	1 cut(s)	1314
PagI	TCATGA	1 cut(s)	1333
PciI	ACATGT	1 cut(s)	1005
PcsI	WCGNNNNNNNCGW	1 cut(s)	500
PctI	GAATGC	1 cut(s)	825
PdiI	GCCGGC	1 cut(s)	744
PfeI	GAWTC	7 cut(s)	944, 1156, 1308, 1320, 1340, 1405, 1706
PflFI	GACNNNGTC	1 cut(s)	406
PflMI	CCANNNNNTGG	1 cut(s)	469
PinAI	ACCGGT	1 cut(s)	453
PkrI	GCNGC	8 cut(s)	306, 311, 499, 512, 650, 653, 979, 1292
PleI	GAGTC	2 cut(s)	383, 403
PluTI	GGCGCC	2 cut(s)	743, 749
PpsI	GAGTC	2 cut(s)	383, 403
PscI	ACATGT	1 cut(s)	1005
PsiI	TTATAA	1 cut(s)	720
Psp6I	CCWGG	2 cut(s)	462, 748
PspEI	GGTNACC	1 cut(s)	34
PspGI	CCWGG	2 cut(s)	462, 748
PspN4I	GGNNCC	4 cut(s)	741, 747, 1506, 1692
PspXI	VCTCGAGB	1 cut(s)	1314
PstI	CTGCAG	1 cut(s)	653
PsuI	RGATCY	3 cut(s)	1578, 1690, 1868
PsyI	GACNNNGTC	1 cut(s)	406
RruI	TCGCGA	1 cut(s)	524
RsaI	GTAC	5 cut(s)	205, 341, 563, 621, 1107
RsaNI	GTAC	5 cut(s)	204, 340, 562, 620, 1106
SalI	GTCGAC	1 cut(s)	386
SaqAI	TTAA	3 cut(s)	890, 1116, 1811
SatI	GCNGC	8 cut(s)	305, 310, 498, 511, 649, 652, 978, 1291
Sau3AI	GATC	5 cut(s)	12, 1453, 1578, 1690, 1868
SchI	GAGTC	2 cut(s)	383, 404
ScrFI	CCNGG	3 cut(s)	314, 464, 750
SduI	GDGCHC	3 cut(s)	581, 757, 1224
SfaNI	GCATC	5 cut(s)	444, 450, 1384, 1724, 1746
SfcI	CTRYAG	1 cut(s)	649
SfiI	GGCCNNNNNGGCC	1 cut(s)	497
SfoI	GGCGCC	2 cut(s)	741, 747
Sfr274I	CTCGAG	1 cut(s)	1314
SgrAI	CRCCGGYG	1 cut(s)	742
SlaI	CTCGAG	1 cut(s)	1314
SmlI	CTYRAG	3 cut(s)	1314, 1574, 1729
SmoI	CTYRAG	3 cut(s)	1314, 1574, 1729
SphI	GCATGC	1 cut(s)	355
Sse9I	AATT	8 cut(s)	607, 887, 953, 1271, 1413, 1479, 1621, 1655
SsiI	CCGC	7 cut(s)	285, 497, 510, 632, 770, 998, 1020
SspDI	GGCGCC	2 cut(s)	739, 745
SspMI	CTAG	6 cut(s)	594, 822, 854, 1344, 1377, 1908
StyD4I	CCNGG	3 cut(s)	312, 462, 748
TaaI	ACNGT	5 cut(s)	100, 406, 566, 940, 970
TaiI	ACGT	3 cut(s)	252, 432, 731
TaqI	TCGA	9 cut(s)	318, 387, 444, 503, 725, 972, 1171, 1315, 1351
TasI	AATT	8 cut(s)	607, 887, 953, 1271, 1413, 1479, 1621, 1655
TatI	WGTACW	1 cut(s)	561
TauI	GCSGC	2 cut(s)	500, 513
TfiI	GAWTC	7 cut(s)	944, 1156, 1308, 1320, 1340, 1405, 1706
Tru1I	TTAA	3 cut(s)	890, 1116, 1811
Tru9I	TTAA	3 cut(s)	890, 1116, 1811
TscAI	CASTG	5 cut(s)	36, 581, 741, 786, 1889
TseFI	GTSAC	4 cut(s)	34, 245, 277, 781
TseI	GCWGC	6 cut(s)	304, 309, 648, 651, 977, 1290
Tsp45I	GTSAC	4 cut(s)	34, 245, 277, 781
TspGWI	ACGGA	3 cut(s)	400, 497, 1489
TspRI	CASTG	5 cut(s)	36, 581, 741, 786, 1889
Tth111I	GACNNNGTC	1 cut(s)	406
Van91I	CCANNNNNTGG	1 cut(s)	469
VneI	GTGCAC	1 cut(s)	577
XapI	RAATTY	2 cut(s)	1413, 1621
XceI	RCATGY	2 cut(s)	355, 1009
XhoI	CTCGAG	1 cut(s)	1314
XmiI	GTMKAC	1 cut(s)	387
XspI	CTAG	6 cut(s)	594, 822, 854, 1344, 1377, 1908
ZraI	GACGTC	2 cut(s)	250, 729
Zsp2I	ATGCAT	1 cut(s)	1739

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.