Rmu_sc0000315.1_g000093

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0000315.1
Physical Location & Seq
Reverse (-)
334118 .. 334981
864 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0000315.1_g000093.1.cds

Sequence Viewer

Length: 864 bp
atgccttgttttaacttgccatatacgccaatattgatcctctattttctttacgcgctgagcttgctctgcttgagcagtactgtagtgtatgataacgagcatatctgcccaaacaccaccactttcaccgcaaactcctccttccaatcccatcgcgatcaactgctgtcgacccttgtctccaacgccacccgtgacaatggcttttacaatgccactgctggcgaccaaatcgcaaacgagaccgtcttcggactcttcctctgccgcggtgacctgtccaaagatgcttgcagtgactgcgtagtagctgtagcctcggatgttgtgaaacgctgcccaatcgagaaacaggcaattatatggtatgaccactgcatgatacgctactctaactattcattcttttctattcatgaggagttcggttgggtgttatcatggaagggggagaatgttacgcaggatgaggatgcatatttactgtcctcatttgacaacgcagtggaagttactatgaatgggttagtacaaaaggttaccagcgccattaaaaagtttgcgaccaacgaattgaacatcacagagttaaatggaaagccgatctacagccttggacagtgcacgcaggatctgtccactgcagattgcaatatctgtcttagtagagccaaaacagagcttcgggctatagatcgtggaagcacaggggggcgttttctatcaccaagttgtaatattaggttcgatttgaaacccttttacacattacaggcgccagtatcccctccaccggcccctgtagcactgccaacacttggaggtaaaaatatacttaatacactaccgttctccatttga

Protein Analysis

287

Amino Acids

31.74

Weight (kDa)

5.22

Isoelectric Point (pI)

51.66

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 778
AccB7I CCANNNNNTGG 1 cut(s) 821
AccI GTMKAC 1 cut(s) 173
AccII CGCG 3 cut(s) 56, 159, 273
AciI CCGC 3 cut(s) 132, 271, 273
AclWI GGATC 2 cut(s) 31, 642
AcyI GRCGYC 1 cut(s) 779
AfaI GTAC 2 cut(s) 82, 534
AfiI CCNNNNNNNGG 2 cut(s) 796, 821
AgsI TTSAA 2 cut(s) 580, 757
AluBI AGCT 3 cut(s) 63, 314, 685
AluI AGCT 3 cut(s) 63, 314, 685
Alw21I GWGCWC 1 cut(s) 629
Alw26I GTCTC 2 cut(s) 187, 239
Alw44I GTGCAC 1 cut(s) 625
AlwI GGATC 2 cut(s) 31, 642
AlwNI CAGNNNCTG 2 cut(s) 303, 637
AoxI GGCC 1 cut(s) 798
ApaLI GTGCAC 1 cut(s) 625
ApeKI GCWGC 1 cut(s) 339
AspLEI GCGC 3 cut(s) 58, 551, 781
AspS9I GGNCC 1 cut(s) 799
AsuHPI GGTGA 3 cut(s) 121, 287, 720
BaeGI GKGCMC 1 cut(s) 629
BanI GGYRCC 1 cut(s) 778
BbsI GAAGAC 1 cut(s) 244
Bbv12I GWGCWC 1 cut(s) 629
BbvI GCAGC 1 cut(s) 326
BccI CCATC 1 cut(s) 162
BciVI GTATCC 1 cut(s) 796
BcoDI GTCTC 2 cut(s) 187, 239
BfmI CTRYAG 6 cut(s) 84, 315, 610, 645, 693, 804
BfoI RGCGCY 2 cut(s) 552, 782
BfuI GTATCC 1 cut(s) 796
BisI GCNGC 2 cut(s) 271, 340
BlpI GCTNAGC 1 cut(s) 59
BlsI GCNGC 2 cut(s) 272, 341
BmcAI AGTACT 1 cut(s) 82
BmgT120I GGNCC 1 cut(s) 799
BmiI GGNNCC 2 cut(s) 780, 801
BmsI GCATC 2 cut(s) 280, 466
BoxI GACNNNNGTC 1 cut(s) 179
BpiI GAAGAC 1 cut(s) 244
Bpu1102I GCTNAGC 1 cut(s) 59
BpuEI CTTGAG 1 cut(s) 94
BsaHI GRCGYC 1 cut(s) 779
BsaI GGTCTC 1 cut(s) 239
BsaJI CCNNGG 3 cut(s) 271, 321, 616
Bsc4I CCNNNNNNNGG 2 cut(s) 796, 821
Bse118I RCCGGY 1 cut(s) 796
Bse1I ACTGG 1 cut(s) 782
BseDI CCNNGG 3 cut(s) 271, 321, 616
BseGI GGATG 3 cut(s) 331, 475, 481
BseLI CCNNNNNNNGG 2 cut(s) 796, 821
BseMII CTCAG 1 cut(s) 50
BseNI ACTGG 1 cut(s) 782
BseRI GAGGAG 2 cut(s) 130, 437
BseSI GKGCMC 1 cut(s) 629
BseXI GCAGC 1 cut(s) 326
Bsh1236I CGCG 3 cut(s) 56, 159, 273
BshFI GGCC 1 cut(s) 800
BshNI GGYRCC 1 cut(s) 778
BsiHKAI GWGCWC 1 cut(s) 629
BsiSI CCGG 1 cut(s) 797
BslI CCNNNNNNNGG 2 cut(s) 796, 821
BsmAI GTCTC 2 cut(s) 187, 239
BsnI GGCC 1 cut(s) 800
Bso31I GGTCTC 1 cut(s) 239
Bsp1286I GDGCHC 1 cut(s) 629
Bsp143I GATC 5 cut(s) 36, 160, 606, 634, 697
Bsp1720I GCTNAGC 1 cut(s) 59
Bsp68I TCGCGA 1 cut(s) 159
BspACI CCGC 3 cut(s) 132, 271, 273
BspANI GGCC 1 cut(s) 800
BspCNI CTCAG 1 cut(s) 51
BspFNI CGCG 3 cut(s) 56, 159, 273
BspHI TCATGA 1 cut(s) 418
BspLI GGNNCC 2 cut(s) 780, 801
BspMAI CTGCAG 1 cut(s) 649
BspPI GGATC 2 cut(s) 31, 642
BspT107I GGYRCC 1 cut(s) 778
BspTNI GGTCTC 1 cut(s) 239
BsrFI RCCGGY 1 cut(s) 796
BsrI ACTGG 1 cut(s) 782
BssAI RCCGGY 1 cut(s) 796
BssECI CCNNGG 3 cut(s) 271, 321, 616
BssMI GATC 5 cut(s) 36, 160, 606, 634, 697
BssNI GRCGYC 1 cut(s) 779
BssT1I CCWWGG 1 cut(s) 616
Bst4CI ACNGT 5 cut(s) 85, 250, 489, 624, 852
Bst6I CTCTTC 1 cut(s) 266
BstACI GRCGYC 1 cut(s) 779
BstAPI GCANNNNNTGC 1 cut(s) 303
BstC8I GCNNGC 4 cut(s) 65, 226, 295, 629
BstDEI CTNAG 2 cut(s) 59, 665
BstDSI CCRYGG 1 cut(s) 271
BstEII GGTNACC 2 cut(s) 275, 541
BstF5I GGATG 3 cut(s) 331, 475, 481
BstFNI CGCG 3 cut(s) 56, 159, 273
BstH2I RGCGCY 2 cut(s) 552, 782
BstHHI GCGC 3 cut(s) 58, 551, 781
BstKTI GATC 5 cut(s) 39, 163, 609, 637, 700
BstMAI GTCTC 2 cut(s) 187, 239
BstMBI GATC 5 cut(s) 36, 160, 606, 634, 697
BstMWI GCNNNNNNNGC 6 cut(s) 25, 64, 69, 303, 387, 806
BstPAI GACNNNNGTC 1 cut(s) 179
BstPI GGTNACC 2 cut(s) 275, 541
BstSFI CTRYAG 6 cut(s) 84, 315, 610, 645, 693, 804
BstSLI GKGCMC 1 cut(s) 629
BstUI CGCG 3 cut(s) 56, 159, 273
BstV1I GCAGC 1 cut(s) 326
BstV2I GAAGAC 1 cut(s) 244
BstX2I RGATCY 1 cut(s) 634
BstYI RGATCY 1 cut(s) 634
BsuI GTATCC 1 cut(s) 796
BsuRI GGCC 1 cut(s) 800
BtgI CCRYGG 1 cut(s) 271
BtgZI GCGATG 1 cut(s) 140
BtsCI GGATG 3 cut(s) 331, 475, 481
BtsI GCAGTG 6 cut(s) 219, 304, 376, 513, 642, 809
BtsIMutI CAGTG 7 cut(s) 219, 304, 376, 513, 629, 642, 809
BtuMI TCGCGA 1 cut(s) 159
Cac8I GCNNGC 4 cut(s) 65, 226, 295, 629
CaiI CAGNNNCTG 2 cut(s) 303, 637
CciI TCATGA 1 cut(s) 418
CfoI GCGC 3 cut(s) 58, 551, 781
Cfr10I RCCGGY 1 cut(s) 796
Cfr13I GGNCC 1 cut(s) 799
Cfr42I CCGCGG 1 cut(s) 274
Csp6I GTAC 2 cut(s) 81, 533
CviAII CATG 3 cut(s) 382, 419, 444
CviQI GTAC 2 cut(s) 81, 533
DdeI CTNAG 2 cut(s) 59, 665
DinI GGCGCC 1 cut(s) 780
DpnI GATC 5 cut(s) 38, 162, 608, 636, 699
DpnII GATC 5 cut(s) 36, 160, 606, 634, 697
Eam1104I CTCTTC 1 cut(s) 266
EarI CTCTTC 1 cut(s) 266
Eco130I CCWWGG 1 cut(s) 616
Eco31I GGTCTC 1 cut(s) 239
Eco91I GGTNACC 2 cut(s) 275, 541
EcoO65I GGTNACC 2 cut(s) 275, 541
EcoT14I CCWWGG 1 cut(s) 616
EcoT22I ATGCAT 1 cut(s) 481
EgeI GGCGCC 1 cut(s) 780
EheI GGCGCC 1 cut(s) 780
ErhI CCWWGG 1 cut(s) 616
FaeI CATG 3 cut(s) 385, 422, 447
FatI CATG 3 cut(s) 381, 418, 443
FblI GTMKAC 1 cut(s) 173
Fnu4HI GCNGC 2 cut(s) 271, 340
FokI GGATG 3 cut(s) 338, 482, 488
Fsp4HI GCNGC 2 cut(s) 271, 340
GlaI GCGC 3 cut(s) 57, 550, 780
GluI GCNGC 2 cut(s) 271, 340
HaeII RGCGCY 2 cut(s) 552, 782
HaeIII GGCC 1 cut(s) 800
HapII CCGG 1 cut(s) 797
HhaI GCGC 3 cut(s) 58, 551, 781
Hin1I GRCGYC 1 cut(s) 779
Hin1II CATG 3 cut(s) 385, 422, 447
Hin6I GCGC 3 cut(s) 56, 549, 779
HinP1I GCGC 3 cut(s) 56, 549, 779
HincII GTYRAC 1 cut(s) 174
HindII GTYRAC 1 cut(s) 174
HinfI GANTC 1 cut(s) 258
HpaII CCGG 1 cut(s) 797
HphI GGTGA 3 cut(s) 121, 287, 720
Hpy166II GTNNAC 3 cut(s) 174, 627, 642
Hpy188I TCNGA 2 cut(s) 257, 325
Hpy188III TCNNGA 3 cut(s) 158, 349, 419
Hpy8I GTNNAC 3 cut(s) 174, 627, 642
HpyAV CCTTC 2 cut(s) 154, 442
HpyCH4III ACNGT 5 cut(s) 85, 250, 489, 624, 852
HpyCH4V TGCA 6 cut(s) 297, 381, 479, 627, 647, 654
HpyF10VI GCNNNNNNNGC 6 cut(s) 25, 64, 69, 303, 387, 806
HpyF3I CTNAG 2 cut(s) 59, 665
Hsp92I GRCGYC 1 cut(s) 779
Hsp92II CATG 3 cut(s) 385, 422, 447
HspAI GCGC 3 cut(s) 56, 549, 779
KasI GGCGCC 1 cut(s) 778
KspI CCGCGG 1 cut(s) 274
Kzo9I GATC 5 cut(s) 36, 160, 606, 634, 697
Lsp1109I GCAGC 1 cut(s) 326
LweI GCATC 2 cut(s) 280, 466
MaeIII GTNAC 6 cut(s) 197, 275, 299, 460, 514, 541
MalI GATC 5 cut(s) 38, 162, 608, 636, 699
MboI GATC 5 cut(s) 36, 160, 606, 634, 697
MboII GAAGA 2 cut(s) 244, 253
MflI RGATCY 1 cut(s) 634
MhlI GDGCHC 1 cut(s) 629
MluCI AATT 2 cut(s) 360, 575
Mly113I GGCGCC 1 cut(s) 779
MlyI GAGTC 1 cut(s) 252
MmeI TCCRAC 1 cut(s) 210
MnlI CCTC 9 cut(s) 50, 151, 275, 331, 415, 466, 502, 801, 818
Mph1103I ATGCAT 1 cut(s) 481
MseI TTAA 4 cut(s) 12, 555, 593, 840
MspA1I CMGCKG 1 cut(s) 273
MspI CCGG 1 cut(s) 797
MvnI CGCG 3 cut(s) 56, 159, 273
MwoI GCNNNNNNNGC 6 cut(s) 25, 64, 69, 303, 387, 806
NarI GGCGCC 1 cut(s) 779
NdeII GATC 5 cut(s) 36, 160, 606, 634, 697
NlaIII CATG 3 cut(s) 385, 422, 447
NlaIV GGNNCC 2 cut(s) 780, 801
NmuCI GTSAC 3 cut(s) 197, 275, 299
NruI TCGCGA 1 cut(s) 159
NsiI ATGCAT 1 cut(s) 481
PagI TCATGA 1 cut(s) 418
PflMI CCANNNNNTGG 1 cut(s) 821
PkrI GCNGC 2 cut(s) 272, 341
PleI GAGTC 1 cut(s) 252
PluTI GGCGCC 1 cut(s) 782
PpsI GAGTC 1 cut(s) 252
PshAI GACNNNNGTC 1 cut(s) 179
PspEI GGTNACC 2 cut(s) 275, 541
PspN4I GGNNCC 2 cut(s) 780, 801
PspPI GGNCC 1 cut(s) 799
PstI CTGCAG 1 cut(s) 649
PstNI CAGNNNCTG 2 cut(s) 303, 637
PsuI RGATCY 1 cut(s) 634
RruI TCGCGA 1 cut(s) 159
RsaI GTAC 2 cut(s) 82, 534
RsaNI GTAC 2 cut(s) 81, 533
SacII CCGCGG 1 cut(s) 274
SalI GTCGAC 1 cut(s) 172
SaqAI TTAA 4 cut(s) 12, 555, 593, 840
SatI GCNGC 2 cut(s) 271, 340
Sau3AI GATC 5 cut(s) 36, 160, 606, 634, 697
Sau96I GGNCC 1 cut(s) 799
ScaI AGTACT 1 cut(s) 82
SchI GAGTC 1 cut(s) 252
SduI GDGCHC 1 cut(s) 629
SetI ASST 7 cut(s) 65, 282, 316, 543, 687, 749, 829
SfaNI GCATC 2 cut(s) 280, 466
SfcI CTRYAG 6 cut(s) 84, 315, 610, 645, 693, 804
SfoI GGCGCC 1 cut(s) 780
Sfr303I CCGCGG 1 cut(s) 274
SgrBI CCGCGG 1 cut(s) 274
SmlI CTYRAG 1 cut(s) 73
SmoI CTYRAG 1 cut(s) 73
Sse9I AATT 2 cut(s) 360, 575
SsiI CCGC 3 cut(s) 132, 271, 273
SspDI GGCGCC 1 cut(s) 778
SspI AATATT 2 cut(s) 33, 742
StyI CCWWGG 1 cut(s) 616
TaaI ACNGT 5 cut(s) 85, 250, 489, 624, 852
TaqI TCGA 3 cut(s) 173, 348, 750
TasI AATT 2 cut(s) 360, 575
TatI WGTACW 2 cut(s) 80, 532
TauI GCSGC 1 cut(s) 273
Tru1I TTAA 4 cut(s) 12, 555, 593, 840
Tru9I TTAA 4 cut(s) 12, 555, 593, 840
TscAI CASTG 7 cut(s) 226, 304, 383, 513, 629, 649, 816
TseFI GTSAC 3 cut(s) 197, 275, 299
TseI GCWGC 1 cut(s) 339
Tsp45I GTSAC 3 cut(s) 197, 275, 299
TspDTI ATGAA 3 cut(s) 393, 407, 536
TspRI CASTG 7 cut(s) 226, 304, 383, 513, 629, 649, 816
Van91I CCANNNNNTGG 1 cut(s) 821
VneI GTGCAC 1 cut(s) 625
XmiI GTMKAC 1 cut(s) 173
ZrmI AGTACT 1 cut(s) 82
Zsp2I ATGCAT 1 cut(s) 481
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.