Rh2BG301100

Cysteine-rich receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr2B
Physical Location & Seq
Forward (+)
34763332 .. 34766412
3081 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh2BG301100.1

Sequence Viewer

Length: 915 bp
ATGCCGATCCTCTATTTTCTTTACACGCTGAGCTCGCTCCGCTTGAGCAGTACTGTAGCGTATGGTAAATACCTCCACCATTTCTGCCCAAACACCACCACTTTCACCGCAAACTCCTCCTTCCAATCCCATCGCGATCAACTGCTGTCGACCCTTGTCTCTAACGCCACCCGTGACAATGGCTTTTACTATGCCACTGCTGGCGGCCAAATTTCAAACGAGACCGTCAACGGACTCTTCCTCTGCCGCGGTGACCTGTCCAAAGATGCTTGCAGTGACTGCGTAGTCGCTGTAGCCTCTGATGTTGTGAAACGCTGCCCAATCGAGAAAAAGGCTATTATATGGTATGACTACTGCATGATACGCTACTCTAACTATTCATTCTTTTCTATTGATGAGGACTGGCCTTTCCACTTCAAGTGGAACTGGAACGGGGAGAATGTTAGGCAGGAAGGGGATGCATTTGCAGCATCCTTTAACAACGTAGTGCGACATACTATGAAGCTTTTAGTACAACAGGTTGCCAGGGCCACAAAAAAGTTTGCGACCAAAGAATCGTACACCAAAGTGTTATTTGGACAGCTGTTCTACAGCCTTGGACAGTGCACGCAGGATCTGTCCACTGCAGATTGCAATAGCTGTCTTACTAGAGCCACAGAAAACCTTCAGAGTATGAATGCTACAGGAAAACATGGGGCGCTTCTTCTATCACCAAGTTGTAATATGAGGTTCGATTTGGAACCCTTTTACACCGCTCTACCTCCGCCCCCCTTCGTAGTATCCCCTCCTCCGCCACCCTTGGAAGTATCCCCTCCTCCGCCACCCTTGGTAGTATCCCCTCCACCGGCCCCGGTAGCACTGCCAACACTTGGAGGTAAAACTATACTTAATACACACTGTACGTTCTCCATTTGA

Protein Analysis

304

Amino Acids

33.75

Weight (kDa)

7.97

Isoelectric Point (pI)

54.24

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 29 - 126 2.9e-25 Salt stress response/antifungal
Stress-antifung PF01657 151 - 245 4.2e-10 Salt stress response/antifungal
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 284
AccB7I CCANNNNNTGG 1 cut(s) 869
AccBSI CCGCTC 1 cut(s) 755
AccI GTMKAC 1 cut(s) 149
AccII CGCG 2 cut(s) 135, 249
AciI CCGC 9 cut(s) 40, 108, 204, 247, 249, 753, 764, 791, 818
AclWI GGATC 1 cut(s) 621
AcoI YGGCCR 1 cut(s) 205
AcsI RAATTY 1 cut(s) 210
AcuI CTGAAG 1 cut(s) 650
AfaI GTAC 4 cut(s) 52, 513, 560, 901
AfiI CCNNNNNNNGG 2 cut(s) 844, 869
AgsI TTSAA 2 cut(s) 216, 418
AjnI CCWGG 1 cut(s) 524
AleI CACNNNNGTG 1 cut(s) 566
AluBI AGCT 4 cut(s) 33, 505, 583, 639
AluI AGCT 4 cut(s) 33, 505, 583, 639
Alw21I GWGCWC 2 cut(s) 35, 608
Alw26I GTCTC 2 cut(s) 163, 215
Alw44I GTGCAC 1 cut(s) 604
AlwI GGATC 1 cut(s) 621
AlwNI CAGNNNCTG 2 cut(s) 279, 616
AoxI GGCC 4 cut(s) 205, 404, 528, 846
ApaLI GTGCAC 1 cut(s) 604
ApeKI GCWGC 2 cut(s) 315, 467
ApoI RAATTY 1 cut(s) 210
Asp700I GAANNNNTTC 1 cut(s) 663
AspLEI GCGC 1 cut(s) 700
AspS9I GGNCC 2 cut(s) 528, 847
AsuC2I CCSGG 1 cut(s) 851
AsuHPI GGTGA 3 cut(s) 97, 263, 702
BaeGI GKGCMC 1 cut(s) 608
BanII GRGCYC 1 cut(s) 35
Bbv12I GWGCWC 2 cut(s) 35, 608
BbvI GCAGC 2 cut(s) 302, 479
BccI CCATC 1 cut(s) 138
BciT130I CCWGG 1 cut(s) 526
BciVI GTATCC 3 cut(s) 790, 817, 844
BcnI CCSGG 1 cut(s) 851
BcoDI GTCTC 2 cut(s) 163, 215
BfaI CTAG 1 cut(s) 648
BfmI CTRYAG 5 cut(s) 54, 291, 589, 624, 681
BfoI RGCGCY 1 cut(s) 701
BfuI GTATCC 3 cut(s) 790, 817, 844
BisI GCNGC 4 cut(s) 205, 247, 316, 468
BlpI GCTNAGC 1 cut(s) 29
BlsI GCNGC 4 cut(s) 206, 248, 317, 469
BmcAI AGTACT 1 cut(s) 52
Bme1390I CCNGG 2 cut(s) 526, 851
BmgT120I GGNCC 2 cut(s) 528, 847
BmiI GGNNCC 2 cut(s) 741, 849
BmrFI CCNGG 2 cut(s) 526, 851
BmsI GCATC 3 cut(s) 256, 448, 479
BoxI GACNNNNGTC 1 cut(s) 155
Bpu1102I GCTNAGC 1 cut(s) 29
BpuEI CTTGAG 1 cut(s) 64
BpuMI CCSGG 1 cut(s) 851
BsaI GGTCTC 1 cut(s) 215
BsaJI CCNNGG 6 cut(s) 247, 525, 595, 798, 825, 849
Bsc4I CCNNNNNNNGG 2 cut(s) 844, 869
Bse118I RCCGGY 1 cut(s) 844
Bse1I ACTGG 2 cut(s) 407, 431
BseBI CCWGG 1 cut(s) 526
BseDI CCNNGG 6 cut(s) 247, 525, 595, 798, 825, 849
BseGI GGATG 2 cut(s) 463, 470
BseLI CCNNNNNNNGG 2 cut(s) 844, 869
BseMII CTCAG 1 cut(s) 20
BseNI ACTGG 2 cut(s) 407, 431
BseRI GAGGAG 3 cut(s) 106, 777, 804
BseSI GKGCMC 1 cut(s) 608
BseXI GCAGC 2 cut(s) 302, 479
Bsh1236I CGCG 2 cut(s) 135, 249
BshFI GGCC 4 cut(s) 207, 406, 530, 848
BsiHKAI GWGCWC 2 cut(s) 35, 608
BsiSI CCGG 2 cut(s) 845, 851
BslI CCNNNNNNNGG 2 cut(s) 844, 869
BsmAI GTCTC 2 cut(s) 163, 215
BsmI GAATGC 1 cut(s) 682
BsnI GGCC 4 cut(s) 207, 406, 530, 848
Bso31I GGTCTC 1 cut(s) 215
Bsp1286I GDGCHC 2 cut(s) 35, 608
Bsp143I GATC 3 cut(s) 6, 136, 613
Bsp1720I GCTNAGC 1 cut(s) 29
Bsp68I TCGCGA 1 cut(s) 135
BspACI CCGC 9 cut(s) 40, 108, 204, 247, 249, 753, 764, 791, 818
BspANI GGCC 4 cut(s) 207, 406, 530, 848
BspCNI CTCAG 1 cut(s) 21
BspFNI CGCG 2 cut(s) 135, 249
BspLI GGNNCC 2 cut(s) 741, 849
BspMAI CTGCAG 1 cut(s) 628
BspPI GGATC 1 cut(s) 621
BspTNI GGTCTC 1 cut(s) 215
BsrBI CCGCTC 1 cut(s) 755
BsrFI RCCGGY 1 cut(s) 844
BsrI ACTGG 2 cut(s) 407, 431
BssAI RCCGGY 1 cut(s) 844
BssECI CCNNGG 6 cut(s) 247, 525, 595, 798, 825, 849
BssMI GATC 3 cut(s) 6, 136, 613
BssT1I CCWWGG 3 cut(s) 595, 798, 825
Bst2UI CCWGG 1 cut(s) 526
Bst4CI ACNGT 4 cut(s) 55, 226, 603, 899
Bst6I CTCTTC 1 cut(s) 242
BstAPI GCANNNNNTGC 1 cut(s) 279
BstC8I GCNNGC 4 cut(s) 35, 202, 271, 608
BstDEI CTNAG 1 cut(s) 29
BstDSI CCRYGG 1 cut(s) 247
BstEII GGTNACC 1 cut(s) 251
BstF5I GGATG 2 cut(s) 463, 470
BstFNI CGCG 2 cut(s) 135, 249
BstH2I RGCGCY 1 cut(s) 701
BstHHI GCGC 1 cut(s) 700
BstKTI GATC 3 cut(s) 9, 139, 616
BstMAI GTCTC 2 cut(s) 163, 215
BstMBI GATC 3 cut(s) 6, 136, 613
BstMWI GCNNNNNNNGC 6 cut(s) 34, 39, 279, 363, 467, 854
BstNI CCWGG 1 cut(s) 526
BstPAI GACNNNNGTC 1 cut(s) 155
BstPI GGTNACC 1 cut(s) 251
BstSCI CCNGG 2 cut(s) 524, 849
BstSFI CTRYAG 5 cut(s) 54, 291, 589, 624, 681
BstSLI GKGCMC 1 cut(s) 608
BstUI CGCG 2 cut(s) 135, 249
BstV1I GCAGC 2 cut(s) 302, 479
BstX2I RGATCY 1 cut(s) 613
BstYI RGATCY 1 cut(s) 613
BsuI GTATCC 3 cut(s) 790, 817, 844
BsuRI GGCC 4 cut(s) 207, 406, 530, 848
BtgI CCRYGG 1 cut(s) 247
BtgZI GCGATG 1 cut(s) 116
BtsCI GGATG 2 cut(s) 463, 470
BtsI GCAGTG 4 cut(s) 195, 280, 621, 857
BtsIMutI CAGTG 6 cut(s) 195, 280, 608, 621, 857, 895
BtuMI TCGCGA 1 cut(s) 135
Cac8I GCNNGC 4 cut(s) 35, 202, 271, 608
CaiI CAGNNNCTG 2 cut(s) 279, 616
CfoI GCGC 1 cut(s) 700
Cfr10I RCCGGY 1 cut(s) 844
Cfr13I GGNCC 2 cut(s) 528, 847
Cfr42I CCGCGG 1 cut(s) 250
Csp6I GTAC 4 cut(s) 51, 512, 559, 900
CviAII CATG 2 cut(s) 358, 692
CviQI GTAC 4 cut(s) 51, 512, 559, 900
DdeI CTNAG 1 cut(s) 29
DpnI GATC 3 cut(s) 8, 138, 615
DpnII GATC 3 cut(s) 6, 136, 613
DrdI GACNNNNNNGTC 1 cut(s) 284
DseDI GACNNNNNNGTC 1 cut(s) 284
EaeI YGGCCR 1 cut(s) 205
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
EciI GGCGGA 3 cut(s) 753, 780, 807
Ecl136II GAGCTC 1 cut(s) 33
Eco130I CCWWGG 3 cut(s) 595, 798, 825
Eco24I GRGCYC 1 cut(s) 35
Eco31I GGTCTC 1 cut(s) 215
Eco53kI GAGCTC 1 cut(s) 33
Eco57I CTGAAG 1 cut(s) 650
Eco91I GGTNACC 1 cut(s) 251
EcoICRI GAGCTC 1 cut(s) 33
EcoO65I GGTNACC 1 cut(s) 251
EcoRII CCWGG 1 cut(s) 524
EcoT14I CCWWGG 3 cut(s) 595, 798, 825
EcoT22I ATGCAT 1 cut(s) 463
EcoT38I GRGCYC 1 cut(s) 35
ErhI CCWWGG 3 cut(s) 595, 798, 825
FaeI CATG 2 cut(s) 361, 695
FatI CATG 2 cut(s) 357, 691
FblI GTMKAC 1 cut(s) 149
Fnu4HI GCNGC 4 cut(s) 205, 247, 316, 468
FokI GGATG 2 cut(s) 457, 470
FriOI GRGCYC 1 cut(s) 35
Fsp4HI GCNGC 4 cut(s) 205, 247, 316, 468
FspBI CTAG 1 cut(s) 648
GlaI GCGC 1 cut(s) 699
GluI GCNGC 4 cut(s) 205, 247, 316, 468
HaeII RGCGCY 1 cut(s) 701
HaeIII GGCC 4 cut(s) 207, 406, 530, 848
HapII CCGG 2 cut(s) 845, 851
HhaI GCGC 1 cut(s) 700
Hin1II CATG 2 cut(s) 361, 695
Hin6I GCGC 1 cut(s) 698
HinP1I GCGC 1 cut(s) 698
HincII GTYRAC 2 cut(s) 150, 229
HindII GTYRAC 2 cut(s) 150, 229
HindIII AAGCTT 1 cut(s) 503
HinfI GANTC 2 cut(s) 234, 554
HpaII CCGG 2 cut(s) 845, 851
HphI GGTGA 3 cut(s) 97, 263, 702
Hpy166II GTNNAC 5 cut(s) 150, 229, 561, 606, 621
Hpy188I TCNGA 2 cut(s) 301, 669
Hpy188III TCNNGA 2 cut(s) 134, 325
Hpy8I GTNNAC 5 cut(s) 150, 229, 561, 606, 621
HpyAV CCTTC 4 cut(s) 130, 446, 674, 781
HpyCH4III ACNGT 4 cut(s) 55, 226, 603, 899
HpyCH4IV ACGT 2 cut(s) 483, 902
HpyCH4V TGCA 7 cut(s) 273, 357, 461, 467, 606, 626, 633
HpyF10VI GCNNNNNNNGC 6 cut(s) 34, 39, 279, 363, 467, 854
HpyF3I CTNAG 1 cut(s) 29
HpySE526I ACGT 2 cut(s) 483, 902
Hsp92II CATG 2 cut(s) 361, 695
HspAI GCGC 1 cut(s) 698
KspI CCGCGG 1 cut(s) 250
Kzo9I GATC 3 cut(s) 6, 136, 613
LmnI GCTCC 1 cut(s) 42
Lsp1109I GCAGC 2 cut(s) 302, 479
LweI GCATC 3 cut(s) 256, 448, 479
MaeI CTAG 1 cut(s) 648
MaeII ACGT 2 cut(s) 483, 902
MaeIII GTNAC 3 cut(s) 173, 251, 275
MalI GATC 3 cut(s) 8, 138, 615
MbiI CCGCTC 1 cut(s) 755
MboI GATC 3 cut(s) 6, 136, 613
MboII GAAGA 2 cut(s) 229, 695
MflI RGATCY 1 cut(s) 613
MhlI GDGCHC 2 cut(s) 35, 608
MluCI AATT 1 cut(s) 210
MlyI GAGTC 1 cut(s) 228
Mph1103I ATGCAT 1 cut(s) 463
MroXI GAANNNNTTC 1 cut(s) 663
MseI TTAA 2 cut(s) 477, 888
MslI CAYNNNNRTG 1 cut(s) 566
MspA1I CMGCKG 2 cut(s) 249, 583
MspI CCGG 2 cut(s) 845, 851
MspR9I CCNGG 2 cut(s) 526, 851
Mva1269I GAATGC 1 cut(s) 682
MvaI CCWGG 1 cut(s) 526
MvnI CGCG 2 cut(s) 135, 249
MwoI GCNNNNNNNGC 6 cut(s) 34, 39, 279, 363, 467, 854
NciI CCSGG 1 cut(s) 851
NdeII GATC 3 cut(s) 6, 136, 613
NlaIII CATG 2 cut(s) 361, 695
NlaIV GGNNCC 2 cut(s) 741, 849
NmuCI GTSAC 3 cut(s) 173, 251, 275
NruI TCGCGA 1 cut(s) 135
NsiI ATGCAT 1 cut(s) 463
OliI CACNNNNGTG 1 cut(s) 566
PctI GAATGC 1 cut(s) 682
PdmI GAANNNNTTC 1 cut(s) 663
PfeI GAWTC 1 cut(s) 554
PflMI CCANNNNNTGG 1 cut(s) 869
PkrI GCNGC 4 cut(s) 206, 248, 317, 469
PleI GAGTC 1 cut(s) 228
PpsI GAGTC 1 cut(s) 228
PshAI GACNNNNGTC 1 cut(s) 155
Psp124BI GAGCTC 1 cut(s) 35
Psp6I CCWGG 1 cut(s) 524
PspEI GGTNACC 1 cut(s) 251
PspGI CCWGG 1 cut(s) 524
PspN4I GGNNCC 2 cut(s) 741, 849
PspPI GGNCC 2 cut(s) 528, 847
PstI CTGCAG 1 cut(s) 628
PstNI CAGNNNCTG 2 cut(s) 279, 616
PsuI RGATCY 1 cut(s) 613
PvuII CAGCTG 1 cut(s) 583
RruI TCGCGA 1 cut(s) 135
RsaI GTAC 4 cut(s) 52, 513, 560, 901
RsaNI GTAC 4 cut(s) 51, 512, 559, 900
RseI CAYNNNNRTG 1 cut(s) 566
SacI GAGCTC 1 cut(s) 35
SacII CCGCGG 1 cut(s) 250
SalI GTCGAC 1 cut(s) 148
SaqAI TTAA 2 cut(s) 477, 888
SatI GCNGC 4 cut(s) 205, 247, 316, 468
Sau3AI GATC 3 cut(s) 6, 136, 613
Sau96I GGNCC 2 cut(s) 528, 847
ScaI AGTACT 1 cut(s) 52
SchI GAGTC 1 cut(s) 228
ScrFI CCNGG 2 cut(s) 526, 851
SduI GDGCHC 2 cut(s) 35, 608
SfaNI GCATC 3 cut(s) 256, 448, 479
SfcI CTRYAG 5 cut(s) 54, 291, 589, 624, 681
Sfr303I CCGCGG 1 cut(s) 250
SgrBI CCGCGG 1 cut(s) 250
SmiMI CAYNNNNRTG 1 cut(s) 566
SmlI CTYRAG 1 cut(s) 43
SmoI CTYRAG 1 cut(s) 43
Sse9I AATT 1 cut(s) 210
SsiI CCGC 9 cut(s) 40, 108, 204, 247, 249, 753, 764, 791, 818
SspMI CTAG 1 cut(s) 648
SstI GAGCTC 1 cut(s) 35
StyD4I CCNGG 2 cut(s) 524, 849
StyI CCWWGG 3 cut(s) 595, 798, 825
TaaI ACNGT 4 cut(s) 55, 226, 603, 899
TaiI ACGT 2 cut(s) 486, 905
TaqI TCGA 3 cut(s) 149, 324, 732
TasI AATT 1 cut(s) 210
TatI WGTACW 2 cut(s) 50, 511
TauI GCSGC 2 cut(s) 207, 249
TfiI GAWTC 1 cut(s) 554
Tru1I TTAA 2 cut(s) 477, 888
Tru9I TTAA 2 cut(s) 477, 888
TscAI CASTG 6 cut(s) 202, 280, 608, 628, 864, 902
TseFI GTSAC 3 cut(s) 173, 251, 275
TseI GCWGC 2 cut(s) 315, 467
Tsp45I GTSAC 3 cut(s) 173, 251, 275
TspDTI ATGAA 3 cut(s) 369, 515, 689
TspGWI ACGGA 1 cut(s) 246
TspRI CASTG 6 cut(s) 202, 280, 608, 628, 864, 902
Van91I CCANNNNNTGG 1 cut(s) 869
VneI GTGCAC 1 cut(s) 604
XapI RAATTY 1 cut(s) 210
XmiI GTMKAC 1 cut(s) 149
XmnI GAANNNNTTC 1 cut(s) 663
XspI CTAG 1 cut(s) 648
ZrmI AGTACT 1 cut(s) 52
Zsp2I ATGCAT 1 cut(s) 463
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.