Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp04

Orthogroup ID

OG0000699

Physical Location & Seq

Genomic Coordinates Forward (+)

1280436 .. 1281675

Gene Structure 1240 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.4G027600.1

Sequence Viewer

CDS Protein Promoter (2k)

Length: 243 bp

ATGAAAACCAAAATGTCTTCCGTGCATAATCTGATGCTTGTTTCCATTCTCTCCTCCATATTTGTTGTTACTCTGCTCAGCTTTCCCAGCCCAGCTGAAGCTGATTATCTATACAATGTCTGCCCAATTGGTGCATATCTCTCTCAAAAATCTGGAAAATTTATCATCAAATTCGAGTCAAGTCTGCAGATTTACATGAAAAAAAGTTCCTGCTTATATTCTGCTGGCATGGGCAAAAAGTGA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0005575 GO:0005623 GO:0005886 GO:0006464 GO:0006468 GO:0006793 GO:0006796 GO:0006807 GO:0006950 GO:0006952 GO:0008150 GO:0008152 GO:0009605 GO:0009607 GO:0009617 GO:0009987 GO:0016020 GO:0016301 GO:0016310 GO:0016740 GO:0016772 GO:0016773 GO:0019538 GO:0036211 GO:0042742 GO:0043170 GO:0043207 GO:0043412 GO:0044237 GO:0044238 GO:0044260 GO:0044267 GO:0044464 GO:0050896 GO:0051704 GO:0051707 GO:0071704 GO:0071944 GO:0098542 GO:0140096 GO:1901564

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

81

Amino Acids

8.85

Weight (kDa)

9.52

Isoelectric Point (pI)

64.06

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

Style Settings

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Align Labels (Cladogram)

Image

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Publication-ready

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Orthologous Genes (Group: OG0000699)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT1G61750
fragaria_vesca	FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica	MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica	Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis	pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis	RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata	RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora	Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii	Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa	Rorug06G0063800
rosa_samantha	Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana	Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AcsI	RAATTY	2 cut(s)	158, 170
AcuI	CTGAAG	1 cut(s)	117
AluBI	AGCT	3 cut(s)	81, 95, 101
AluI	AGCT	3 cut(s)	81, 95, 101
ApoI	RAATTY	2 cut(s)	158, 170
BbsI	GAAGAC	1 cut(s)	9
BfmI	CTRYAG	1 cut(s)	185
BlpI	GCTNAGC	1 cut(s)	77
BmsI	GCATC	1 cut(s)	24
BpiI	GAAGAC	1 cut(s)	9
Bpu1102I	GCTNAGC	1 cut(s)	77
BseMII	CTCAG	1 cut(s)	91
BseRI	GAGGAG	1 cut(s)	43
BseYI	CCCAGC	2 cut(s)	86, 91
Bsp1720I	GCTNAGC	1 cut(s)	77
BspCNI	CTCAG	1 cut(s)	90
BspMAI	CTGCAG	1 cut(s)	189
BstC8I	GCNNGC	1 cut(s)	226
BstDEI	CTNAG	1 cut(s)	77
BstMWI	GCNNNNNNNGC	1 cut(s)	87
BstSFI	CTRYAG	1 cut(s)	185
BstV2I	GAAGAC	1 cut(s)	9
Cac8I	GCNNGC	1 cut(s)	226
CviAII	CATG	2 cut(s)	196, 229
CviJI	RGCY	4 cut(s)	81, 90, 95, 101
CviKI_1	RGCY	4 cut(s)	81, 90, 95, 101
DdeI	CTNAG	1 cut(s)	77
Eco57I	CTGAAG	1 cut(s)	117
FaeI	CATG	2 cut(s)	199, 232
FaiI	YATR	7 cut(s)	27, 59, 112, 136, 197, 217, 230
FatI	CATG	2 cut(s)	195, 228
GsaI	CCCAGC	2 cut(s)	90, 95
Hin1II	CATG	2 cut(s)	199, 232
HinfI	GANTC	1 cut(s)	176
Hpy188I	TCNGA	1 cut(s)	33
Hpy188III	TCNNGA	1 cut(s)	153
HpyCH4V	TGCA	3 cut(s)	25, 134, 187
HpyF10VI	GCNNNNNNNGC	1 cut(s)	87
HpyF3I	CTNAG	1 cut(s)	77
Hsp92II	CATG	2 cut(s)	199, 232
LpnPI	CCDG	5 cut(s)	100, 105, 138, 210, 223
LweI	GCATC	1 cut(s)	24
MaeIII	GTNAC	1 cut(s)	67
MboII	GAAGA	1 cut(s)	9
MfeI	CAATTG	1 cut(s)	126
MluCI	AATT	3 cut(s)	126, 158, 170
MlyI	GAGTC	1 cut(s)	185
MnlI	CCTC	1 cut(s)	64
MspA1I	CMGCKG	1 cut(s)	95
MunI	CAATTG	1 cut(s)	126
MwoI	GCNNNNNNNGC	1 cut(s)	87
NlaIII	CATG	2 cut(s)	199, 232
PleI	GAGTC	1 cut(s)	184
PpsI	GAGTC	1 cut(s)	184
PspFI	CCCAGC	2 cut(s)	86, 91
PstI	CTGCAG	1 cut(s)	189
PvuII	CAGCTG	1 cut(s)	95
SchI	GAGTC	1 cut(s)	185
SetI	ASST	3 cut(s)	83, 97, 103
SfaNI	GCATC	1 cut(s)	24
SfcI	CTRYAG	1 cut(s)	185
Sse9I	AATT	3 cut(s)	126, 158, 170
TaqI	TCGA	1 cut(s)	174
TasI	AATT	3 cut(s)	126, 158, 170
TspDTI	ATGAA	2 cut(s)	17, 212
TspGWI	ACGGA	1 cut(s)	10
XapI	RAATTY	2 cut(s)	158, 170

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.