Rroxscaffold_1G00071780

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000699
Physical Location & Seq
Reverse (-)
92910666 .. 92913845
3180 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00071780.1

Sequence Viewer

Length: 1941 bp
ATGGCAGAAGTGGTCCTTCTATTCCTTTCAATGGTTGCCTTGCTCGGCTTTCCCACTACAAAAGCCGACTATCTCGCCCATGTCTGCCCAAACACCACCGTCTTCAACCCAAACTCCGCCTTCCAAACCAATCGCGACGAATTGCTGTCTAACCTTGTCTCTAATGCCACTCGTGACACCGGCTTTTACCAGACCACTGCTGGAGGCCAGATCTCAACAGAGACCGTGGACGGCCTCTTCCTCTGCCGCGGTGACGTGTCCACAGACGTTTGCAAAGTCTGCGTGGACATCGCGGCCTCAGAGGTTGTCCGAAGGTGTCCCGTCGAGAAACAGGTTGTCATATGGTACGACGAGTGCATGGTACGCTACTCTAACCAGTCACTTCTTTCTACCGCGGAAGACTCACCTTGGGTCTTCATGAGGAACACCACGAATGCGACGCAGGTTGGAGATAATAAAACAACCCTATTTAACCAGGTTCTAGCAAATACCATGATTGGGCTAGTCCTTGAGGTTCTCATCGCCGCTGATAAGTTTGCAACCAAAGAAGATTCTACAGTGTTTACTACGCTGTACACCCTCGGACAGTGCACGCAGGATCTGCCCACCAAAAATTGCAGTGGGTGTCTTACAGGAGCCATAGCACGACTTCCATTTTGCTGTAGTGGAAAACTAGGGGGAAGAGTTCTGTATCCAAGTTGTAATATTAGGTACGAGGTGTACCCCTTCTATTCATCACCTCCTCCGCCAGCCCCAGTGGCAACGGTACGTAAAGGAAAAAATAAACTCTCATCCATAATCATTCCTAGCATTCTTGCTCCAGTTGCTCTCTGTGTGCTAGTTGTGGTTGCGGCCAGATGTTTCATTCGCAAATTAAAAAGAGCCAAACGACAACAAAATGAAGCCGAAAATGATATGACAACTGTTGAATCCTTGCAATTTGACTTGGGAATTATCGAAGCTGCCACGAAAAAGTTTTCTGCCGATAACATGTTAGGTGAAGGCGGATTTGGTCAAGTTTTCAAGGGAACACTTGATAATGGACAAGAAATAGCTGTGAAGAGGCTGTCAAAAAACTCTGGACAAGGTGTACGAGAGTTTAAGAACGAGGTTTTATTGGTAGCAAAGCTTCAACACAGGAATCTCGTAAAGCTTCTAGGGTTTTGCTTGGGAGGAGAAGAAACACTACTTGTCTATGAATATGTGCCCAACAAAAGTCTTGATTATTTTCTATTTGAAGCCAAAAAAAGAGAACAACTGGATTGGTCGAGACGCTGCACCATAATAGGAGGAATCGCTCGAGGAATCCTCTATCTTCATGAAGATTCTAGGCTTCGAGTTATACATCGTGATTTGAAAGCTAGCAATATCTTGTTGGATGCCAGTTTGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTTGGAGTTGATGATCAAACGCAAGGAAGCACGAGAAGAATTGTTGGCACTTATGGTTACATGGCTCCAGAATATGCTATGGAGGGATTGTATTCTATAAAATCTGATGTCTTCAGCTTCGGAATACTCTTGCTTGAGATCCTAACGGGAAGAAAGAACTTTTTAGGTTTTCATCCCACAACTCCTGAACCGACTCTTCTCAGTTATGCTTGGCGATTATGGAACGAAGGAAAAGTGTTGGAGTTGATGGATCCATTGCTGAAATATTCATGCAATCCAAAGGAGTTCTTGAGATACATCCACATTGGATTATTGTGTGTTCAGGAAGACGCAAACAATAGGCCAACCATGTCGTCGGTTGTTCTAATGTTAAAGAGTGAAAATATCAGACTTTCCAAACCTGAGCGACCTGCCTTCTTTACAGGAAGATCTATCAATGATCACTGCCATACATTAGGGGATTTACCTAGTTGCTCTGTCAATGCTTTGACGATTTCTGATGTTATCCCACGCTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3403 Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

646

Amino Acids

71.73

Weight (kDa)

8.27

Isoelectric Point (pI)

41.14

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 29 - 126 3.3e-24 Salt stress response/antifungal
Stress-antifung PF01657 154 - 240 1.5e-09 Salt stress response/antifungal
Pkinase PF00069 328 - 532 2.5e-43 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 329 - 596 1.5e-48 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 433, 1843
AccII CGCG 4 cut(s) 135, 249, 293, 395
AclWI GGATC 4 cut(s) 606, 1558, 1670, 1683
AcoI YGGCCR 1 cut(s) 852
AcsI RAATTY 1 cut(s) 1398
AcuI CTGAAG 1 cut(s) 1522
AfaI GTAC 7 cut(s) 347, 363, 575, 713, 722, 768, 1092
AfiI CCNNNNNNNGG 2 cut(s) 31, 498
AflIII ACRYGT 2 cut(s) 255, 990
AgsI TTSAA 8 cut(s) 30, 106, 929, 1024, 1133, 1238, 1357, 1390
AjiI CACGTC 1 cut(s) 256
AjnI CCWGG 1 cut(s) 474
AjuI GAANNNNNNNTTGG 2 cut(s) 993, 1025
AluBI AGCT 6 cut(s) 962, 1055, 1129, 1153, 1361, 1542
AluI AGCT 6 cut(s) 962, 1055, 1129, 1153, 1361, 1542
Alw21I GWGCWC 1 cut(s) 593
Alw26I GTCTC 3 cut(s) 163, 215, 1264
Alw44I GTGCAC 1 cut(s) 589
AlwI GGATC 4 cut(s) 606, 1558, 1670, 1683
AlwNI CAGNNNCTG 1 cut(s) 601
Ama87I CYCGRG 1 cut(s) 1299
AoxI GGCC 5 cut(s) 205, 232, 294, 852, 1766
ApaLI GTGCAC 1 cut(s) 589
ApeKI GCWGC 2 cut(s) 962, 1275
ApoI RAATTY 1 cut(s) 1398
ArsI GACNNNNNNTTYG 2 cut(s) 639, 671
AspS9I GGNCC 1 cut(s) 13
AsuHPI GGTGA 4 cut(s) 263, 396, 729, 1010
AsuNHI GCTAGC 1 cut(s) 1361
AvaI CYCGRG 1 cut(s) 1299
AvaII GGWCC 1 cut(s) 13
BaeGI GKGCMC 2 cut(s) 593, 1209
BamHI GGATCC 1 cut(s) 1675
BarI GAAGNNNNNNTAC 4 cut(s) 1113, 1145, 1170, 1202
BauI CACGAG 2 cut(s) 171, 1456
BbsI GAAGAC 5 cut(s) 94, 405, 406, 1528, 1758
Bbv12I GWGCWC 1 cut(s) 593
BbvI GCAGC 2 cut(s) 949, 1262
BccI CCATC 1 cut(s) 1666
BceAI ACGGC 1 cut(s) 247
BciT130I CCWGG 1 cut(s) 476
BciVI GTATCC 1 cut(s) 702
BclI TGATCA 2 cut(s) 1438, 1864
BcoDI GTCTC 3 cut(s) 163, 215, 1264
BfaI CTAG 9 cut(s) 482, 503, 674, 807, 839, 1157, 1329, 1362, 1893
BfmI CTRYAG 2 cut(s) 555, 661
BfuAI ACCTGC 2 cut(s) 433, 1843
BfuI GTATCC 1 cut(s) 702
BglI GCCNNNNNGGC 1 cut(s) 758
BglII AGATCT 2 cut(s) 210, 1853
BisI GCNGC 6 cut(s) 247, 294, 525, 852, 963, 1276
BlsI GCNGC 6 cut(s) 248, 295, 526, 853, 964, 1277
Bme1390I CCNGG 1 cut(s) 476
Bme18I GGWCC 1 cut(s) 13
BmeT110I CYCGRG 1 cut(s) 1299
BmgBI CACGTC 1 cut(s) 256
BmgT120I GGNCC 1 cut(s) 13
BmiI GGNNCC 3 cut(s) 637, 1491, 1677
BmrFI CCNGG 1 cut(s) 476
BmrI ACTGGG 1 cut(s) 749
BmsI GCATC 1 cut(s) 1369
BmtI GCTAGC 1 cut(s) 1365
BmuI ACTGGG 1 cut(s) 749
BpiI GAAGAC 5 cut(s) 94, 405, 406, 1528, 1758
BplI GAGNNNNNCTC 2 cut(s) 1293, 1325
BpmI CTGGAG 3 cut(s) 222, 804, 1476
Bpu10I CCTNAGC 1 cut(s) 1827
BpuEI CTTGAG 3 cut(s) 530, 1580, 1735
BsaAI YACGTR 1 cut(s) 770
BsaI GGTCTC 1 cut(s) 215
BsaJI CCNNGG 5 cut(s) 225, 247, 393, 407, 580
BsaXI ACNNNNNCTCC 4 cut(s) 98, 128, 1499, 1529
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 498
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 5 cut(s) 376, 755, 821, 1263, 1383
Bse3DI GCAATG 1 cut(s) 1679
BseBI CCWGG 1 cut(s) 476
BseDI CCNNGG 5 cut(s) 225, 247, 393, 407, 580
BseGI GGATG 4 cut(s) 791, 1384, 1597, 1722
BseLI CCNNNNNNNGG 2 cut(s) 31, 498
BseMI GCAATG 1 cut(s) 1679
BseMII CTCAG 3 cut(s) 312, 1639, 1818
BseNI ACTGG 5 cut(s) 376, 755, 821, 1263, 1383
BseRI GAGGAG 2 cut(s) 732, 1188
BseSI GKGCMC 2 cut(s) 593, 1209
BseXI GCAGC 2 cut(s) 949, 1262
BsgI GTGCAG 1 cut(s) 1261
Bsh1236I CGCG 4 cut(s) 135, 249, 293, 395
BshFI GGCC 5 cut(s) 207, 234, 296, 854, 1768
BsiHKAI GWGCWC 1 cut(s) 593
BsiHKCI CYCGRG 1 cut(s) 1299
BsiSI CCGG 1 cut(s) 180
BslFI GGGAC 1 cut(s) 303
BslI CCNNNNNNNGG 2 cut(s) 31, 498
BsmAI GTCTC 3 cut(s) 163, 215, 1264
BsmBI CGTCTC 1 cut(s) 1264
BsmFI GGGAC 1 cut(s) 303
BsmI GAATGC 2 cut(s) 439, 810
BsnI GGCC 5 cut(s) 207, 234, 296, 854, 1768
Bso31I GGTCTC 1 cut(s) 215
BsoBI CYCGRG 1 cut(s) 1299
Bsp1286I GDGCHC 2 cut(s) 593, 1209
Bsp1407I TGTACA 1 cut(s) 573
Bsp143I GATC 7 cut(s) 210, 598, 1438, 1563, 1675, 1853, 1864
Bsp68I TCGCGA 1 cut(s) 135
BspANI GGCC 5 cut(s) 207, 234, 296, 854, 1768
BspCNI CTCAG 3 cut(s) 311, 1638, 1819
BspFNI CGCG 4 cut(s) 135, 249, 293, 395
BspHI TCATGA 2 cut(s) 417, 1318
BspLI GGNNCC 3 cut(s) 637, 1491, 1677
BspMI ACCTGC 2 cut(s) 433, 1843
BspOI GCTAGC 1 cut(s) 1365
BspPI GGATC 4 cut(s) 606, 1558, 1670, 1683
BspTNI GGTCTC 1 cut(s) 215
BsrDI GCAATG 1 cut(s) 1679
BsrFI RCCGGY 1 cut(s) 179
BsrGI TGTACA 1 cut(s) 573
BsrI ACTGG 5 cut(s) 376, 755, 821, 1263, 1383
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 5 cut(s) 225, 247, 393, 407, 580
BssMI GATC 7 cut(s) 210, 598, 1438, 1563, 1675, 1853, 1864
BssSI CACGAG 2 cut(s) 171, 1456
BssT1I CCWWGG 1 cut(s) 407
Bst2BI CACGAG 2 cut(s) 171, 1456
Bst2UI CCWGG 1 cut(s) 476
Bst4CI ACNGT 6 cut(s) 100, 226, 559, 588, 766, 925
Bst6I CTCTTC 4 cut(s) 242, 676, 1055, 1626
BstAPI GCANNNNNTGC 2 cut(s) 279, 601
BstAUI TGTACA 1 cut(s) 573
BstBAI YACGTR 1 cut(s) 770
BstC8I GCNNGC 3 cut(s) 593, 750, 1363
BstDEI CTNAG 3 cut(s) 298, 1625, 1827
BstDSI CCRYGG 3 cut(s) 225, 247, 393
BstF5I GGATG 4 cut(s) 791, 1384, 1597, 1722
BstFNI CGCG 4 cut(s) 135, 249, 293, 395
BstKTI GATC 7 cut(s) 213, 601, 1441, 1566, 1678, 1856, 1867
BstMAI GTCTC 3 cut(s) 163, 215, 1264
BstMBI GATC 7 cut(s) 210, 598, 1438, 1563, 1675, 1853, 1864
BstMWI GCNNNNNNNGC 5 cut(s) 279, 363, 601, 758, 824
BstNI CCWGG 1 cut(s) 476
BstNSI RCATGY 1 cut(s) 994
BstSCI CCNGG 1 cut(s) 474
BstSFI CTRYAG 2 cut(s) 555, 661
BstSLI GKGCMC 2 cut(s) 593, 1209
BstSNI TACGTA 1 cut(s) 770
BstUI CGCG 4 cut(s) 135, 249, 293, 395
BstV1I GCAGC 2 cut(s) 949, 1262
BstV2I GAAGAC 5 cut(s) 94, 405, 406, 1528, 1758
BstX2I RGATCY 5 cut(s) 210, 598, 1563, 1675, 1853
BstYI RGATCY 5 cut(s) 210, 598, 1563, 1675, 1853
BsuI GTATCC 1 cut(s) 702
BsuRI GGCC 5 cut(s) 207, 234, 296, 854, 1768
BtgI CCRYGG 3 cut(s) 225, 247, 393
BtgZI GCGATG 2 cut(s) 274, 505
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 4 cut(s) 791, 1384, 1597, 1722
BtsI GCAGTG 3 cut(s) 195, 625, 1867
BtsIMutI CAGTG 6 cut(s) 195, 564, 593, 625, 762, 1867
BtuMI TCGCGA 1 cut(s) 135
BveI ACCTGC 2 cut(s) 433, 1843
Cac8I GCNNGC 3 cut(s) 593, 750, 1363
CaiI CAGNNNCTG 1 cut(s) 601
CciI TCATGA 2 cut(s) 417, 1318
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 1 cut(s) 13
Cfr42I CCGCGG 2 cut(s) 250, 396
CseI GACGC 3 cut(s) 448, 1281, 1763
CsiI ACCWGGT 1 cut(s) 474
Csp6I GTAC 7 cut(s) 346, 362, 574, 712, 721, 767, 1091
CviAII CATG 9 cut(s) 80, 358, 418, 493, 991, 1319, 1486, 1695, 1774
CviQI GTAC 7 cut(s) 346, 362, 574, 712, 721, 767, 1091
DdeI CTNAG 3 cut(s) 298, 1625, 1827
DpnI GATC 7 cut(s) 212, 600, 1440, 1565, 1677, 1855, 1866
DpnII GATC 7 cut(s) 210, 598, 1438, 1563, 1675, 1853, 1864
EaeI YGGCCR 1 cut(s) 852
Eam1104I CTCTTC 4 cut(s) 242, 676, 1055, 1626
EarI CTCTTC 4 cut(s) 242, 676, 1055, 1626
EciI GGCGGA 3 cut(s) 106, 735, 1020
Eco105I TACGTA 1 cut(s) 770
Eco130I CCWWGG 1 cut(s) 407
Eco31I GGTCTC 1 cut(s) 215
Eco47I GGWCC 1 cut(s) 13
Eco57I CTGAAG 1 cut(s) 1522
Eco88I CYCGRG 1 cut(s) 1299
EcoRII CCWGG 1 cut(s) 474
EcoT14I CCWWGG 1 cut(s) 407
ErhI CCWWGG 1 cut(s) 407
Esp3I CGTCTC 1 cut(s) 1264
FaeI CATG 9 cut(s) 83, 361, 421, 496, 994, 1322, 1489, 1698, 1777
FalI AAGNNNNNCTT 3 cut(s) 32, 1697, 1729
FaqI GGGAC 1 cut(s) 303
FatI CATG 9 cut(s) 79, 357, 417, 492, 990, 1318, 1485, 1694, 1773
FauNDI CATATG 1 cut(s) 341
FbaI TGATCA 2 cut(s) 1438, 1864
Fnu4HI GCNGC 6 cut(s) 247, 294, 525, 852, 963, 1276
FokI GGATG 4 cut(s) 778, 1391, 1584, 1709
Fsp4HI GCNGC 6 cut(s) 247, 294, 525, 852, 963, 1276
FspBI CTAG 9 cut(s) 482, 503, 674, 807, 839, 1157, 1329, 1362, 1893
GluI GCNGC 6 cut(s) 247, 294, 525, 852, 963, 1276
GsuI CTGGAG 3 cut(s) 222, 804, 1476
HaeIII GGCC 5 cut(s) 207, 234, 296, 854, 1768
HapII CCGG 1 cut(s) 180
HgaI GACGC 3 cut(s) 448, 1281, 1763
Hin1II CATG 9 cut(s) 83, 361, 421, 496, 994, 1322, 1489, 1698, 1777
HindIII AAGCTT 2 cut(s) 1127, 1151
HinfI GANTC 9 cut(s) 401, 551, 929, 1141, 1293, 1305, 1325, 1390, 1618
HpaII CCGG 1 cut(s) 180
HphI GGTGA 4 cut(s) 263, 396, 729, 1010
Hpy166II GTNNAC 8 cut(s) 229, 261, 286, 564, 576, 591, 721, 1091
Hpy188I TCNGA 8 cut(s) 301, 311, 584, 1405, 1531, 1547, 1814, 1924
Hpy8I GTNNAC 8 cut(s) 229, 261, 286, 564, 576, 591, 721, 1091
Hpy99I CGWCG 5 cut(s) 140, 326, 353, 442, 1783
HpyAV CCTTC 7 cut(s) 26, 130, 306, 736, 995, 1646, 1849
HpyCH4III ACNGT 6 cut(s) 100, 226, 559, 588, 766, 925
HpyCH4IV ACGT 3 cut(s) 255, 267, 769
HpyCH4V TGCA 8 cut(s) 273, 357, 539, 591, 618, 937, 1278, 1698
HpyF10VI GCNNNNNNNGC 5 cut(s) 279, 363, 601, 758, 824
HpyF3I CTNAG 3 cut(s) 298, 1625, 1827
HpySE526I ACGT 3 cut(s) 255, 267, 769
Hsp92II CATG 9 cut(s) 83, 361, 421, 496, 994, 1322, 1489, 1698, 1777
Ksp22I TGATCA 2 cut(s) 1438, 1864
KspI CCGCGG 2 cut(s) 250, 396
Kzo9I GATC 7 cut(s) 210, 598, 1438, 1563, 1675, 1853, 1864
LmnI GCTCC 3 cut(s) 635, 823, 1495
Lsp1109I GCAGC 2 cut(s) 949, 1262
LweI GCATC 1 cut(s) 1369
MabI ACCWGGT 1 cut(s) 474
MaeI CTAG 9 cut(s) 482, 503, 674, 807, 839, 1157, 1329, 1362, 1893
MaeII ACGT 3 cut(s) 255, 267, 769
MaeIII GTNAC 4 cut(s) 173, 251, 378, 1481
MalI GATC 7 cut(s) 212, 600, 1440, 1565, 1677, 1855, 1866
MboI GATC 7 cut(s) 210, 598, 1438, 1563, 1675, 1853, 1864
MflI RGATCY 5 cut(s) 210, 598, 1563, 1675, 1853
MhlI GDGCHC 2 cut(s) 593, 1209
MluCI AATT 7 cut(s) 140, 613, 872, 938, 951, 1398, 1464
MlyI GAGTC 2 cut(s) 395, 1612
MmeI TCCRAC 3 cut(s) 427, 1356, 1644
MseI TTAA 4 cut(s) 471, 875, 1101, 1796
MspA1I CMGCKG 3 cut(s) 249, 395, 527
MspI CCGG 1 cut(s) 180
MspR9I CCNGG 1 cut(s) 476
Mva1269I GAATGC 2 cut(s) 439, 810
MvaI CCWGG 1 cut(s) 476
MvnI CGCG 4 cut(s) 135, 249, 293, 395
MwoI GCNNNNNNNGC 5 cut(s) 279, 363, 601, 758, 824
NdeI CATATG 1 cut(s) 341
NdeII GATC 7 cut(s) 210, 598, 1438, 1563, 1675, 1853, 1864
NheI GCTAGC 1 cut(s) 1361
NlaIII CATG 9 cut(s) 83, 361, 421, 496, 994, 1322, 1489, 1698, 1777
NlaIV GGNNCC 3 cut(s) 637, 1491, 1677
NmeAIII GCCGAG 1 cut(s) 24
NmuCI GTSAC 3 cut(s) 173, 251, 378
NruI TCGCGA 1 cut(s) 135
NspI RCATGY 1 cut(s) 994
PaeR7I CTCGAG 1 cut(s) 1299
PagI TCATGA 2 cut(s) 417, 1318
PciI ACATGT 1 cut(s) 990
PctI GAATGC 2 cut(s) 439, 810
PfeI GAWTC 7 cut(s) 551, 929, 1141, 1293, 1305, 1325, 1390
PkrI GCNGC 6 cut(s) 248, 295, 526, 853, 964, 1277
PleI GAGTC 2 cut(s) 395, 1612
PpsI GAGTC 2 cut(s) 395, 1612
Ppu21I YACGTR 1 cut(s) 770
PscI ACATGT 1 cut(s) 990
Psp6I CCWGG 1 cut(s) 474
PspGI CCWGG 1 cut(s) 474
PspN4I GGNNCC 3 cut(s) 637, 1491, 1677
PspPI GGNCC 1 cut(s) 13
PspXI VCTCGAGB 1 cut(s) 1299
PstNI CAGNNNCTG 1 cut(s) 601
PsuI RGATCY 5 cut(s) 210, 598, 1563, 1675, 1853
RruI TCGCGA 1 cut(s) 135
RsaI GTAC 7 cut(s) 347, 363, 575, 713, 722, 768, 1092
RsaNI GTAC 7 cut(s) 346, 362, 574, 712, 721, 767, 1091
SacII CCGCGG 2 cut(s) 250, 396
SaqAI TTAA 4 cut(s) 471, 875, 1101, 1796
SatI GCNGC 6 cut(s) 247, 294, 525, 852, 963, 1276
Sau3AI GATC 7 cut(s) 210, 598, 1438, 1563, 1675, 1853, 1864
Sau96I GGNCC 1 cut(s) 13
SchI GAGTC 2 cut(s) 395, 1612
ScrFI CCNGG 1 cut(s) 476
SduI GDGCHC 2 cut(s) 593, 1209
SexAI ACCWGGT 1 cut(s) 474
SfaNI GCATC 1 cut(s) 1369
SfcI CTRYAG 2 cut(s) 555, 661
Sfr274I CTCGAG 1 cut(s) 1299
Sfr303I CCGCGG 2 cut(s) 250, 396
SgrBI CCGCGG 2 cut(s) 250, 396
SinI GGWCC 1 cut(s) 13
SlaI CTCGAG 1 cut(s) 1299
SmlI CTYRAG 4 cut(s) 509, 1299, 1559, 1714
SmoI CTYRAG 4 cut(s) 509, 1299, 1559, 1714
SnaBI TACGTA 1 cut(s) 770
Sse9I AATT 7 cut(s) 140, 613, 872, 938, 951, 1398, 1464
SspI AATATT 2 cut(s) 706, 1691
SspMI CTAG 9 cut(s) 482, 503, 674, 807, 839, 1157, 1329, 1362, 1893
StyD4I CCNGG 1 cut(s) 474
StyI CCWWGG 1 cut(s) 407
TaaI ACNGT 6 cut(s) 100, 226, 559, 588, 766, 925
TaiI ACGT 3 cut(s) 258, 270, 772
TaqI TCGA 5 cut(s) 324, 957, 1268, 1300, 1336
TasI AATT 7 cut(s) 140, 613, 872, 938, 951, 1398, 1464
TatI WGTACW 1 cut(s) 573
TauI GCSGC 4 cut(s) 249, 296, 527, 854
TfiI GAWTC 7 cut(s) 551, 929, 1141, 1293, 1305, 1325, 1390
Tru1I TTAA 4 cut(s) 471, 875, 1101, 1796
Tru9I TTAA 4 cut(s) 471, 875, 1101, 1796
TscAI CASTG 6 cut(s) 202, 564, 593, 625, 762, 1874
TseFI GTSAC 3 cut(s) 173, 251, 378
TseI GCWGC 2 cut(s) 962, 1275
Tsp45I GTSAC 3 cut(s) 173, 251, 378
TspDTI ATGAA 9 cut(s) 406, 723, 853, 915, 1212, 1307, 1335, 1586, 1683
TspRI CASTG 6 cut(s) 202, 564, 593, 625, 762, 1874
VneI GTGCAC 1 cut(s) 589
VpaK11BI GGWCC 1 cut(s) 13
XapI RAATTY 1 cut(s) 1398
XceI RCATGY 1 cut(s) 994
XcmI CCANNNNNNNNNTGG 1 cut(s) 197
XhoI CTCGAG 1 cut(s) 1299
XspI CTAG 9 cut(s) 482, 503, 674, 807, 839, 1157, 1329, 1362, 1893
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.