pycom05g02330

cellular response to molecule of fungal origin

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr5
OG0000699
Physical Location & Seq
Reverse (-)
2700661 .. 2707015
6355 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom05g02330.3

Sequence Viewer

Length: 1173 bp
ATGCAAGGTGACATGATCCCTTTCTACGTTCTCTCCTTACTTCTTATTGCATTGCCCAGTACTACCACAGATGTCATCAACGATCCCTACACAAGAAGCTCCCGCCGCACCCTCACCGTCTCTTTAAATGCCACCACACCGTCGTCACTGCCACCTAATCAGCCTATGTCTGCGTTGCCACCGGTGAAGGTTGTGAGGGCGTTGGCGACGGCGTCGGCGAAGGCAACTGCAACGGGGTCGGGGAAGGCAACGGCGACGGCGTCGGCGACGGCATCAGCGCCGGCAACAGCAAAGGCGTCGGCGTCAGCAACAGCATCGGTGACTGCGTCGGCACCGGTGCCGGCGTCGCTGCCGCCGTTGCCGGTGTCGCTGCCACCGTCGCTGCCAACCTTCATGACAAACAGATCTGGAAGAAGCAAACCCTCATCGATGATAATCATCGTTGGTACTCTTGGTTCAGTTGCTTTCTGTTCGTTAGTTGTGGTTCTGGCCGGATGCTTCTTTCGCAAGAGACTCAGAACAGTCAAAGAGAGATACCACTCCAAACGACAAAAGAAAAAAGTTGGTAATGATATGAAGAAGACTGTCGAGTCATTGCAATTTAGATTGGAAACTATTGAAACTGCAACGAACAAGTTTTCAGATGATAACAAATTAGGTGAAGGAGGATTTGGTGCCGTTTTCAAGGGCACACTTGGTAATGGACATGAAATAGCAGTAAAACGGCTATCGAAAAGCTCCACACAAGGTGTGCAAGAATTTCAGAATGAGGTGGTATTGGTGGCCAAACTTCAACACAGAAACCTTGTGAGGCTTCTGGGATTTTGCTTGGAAGGAGAAGAAACCTTACTTGTCTATGAATATGTACCCAACAAAAGTCTTGACAATTTTCTATTTGAACCCAATAAACGAGAGCAGCTGGATTGGTCGAAACGTTGCATGATAATAGGAGGAATCGCTCGAGGAATTTTATATCTTCATGAAGATTCTAGGCTTAGAGTTATACATCGTGATTTAAAAGCTAGCAACATCTTGTTAGATGACGAAATGAATCCAAAAATATCAGATTTTGGGATGGCTAAAATGTTTGGAGTTGATGGTCAAACTCAAGGAAATACCGAAAGAGTCGTCGGAACTCTTGGTTACATGGCTCCAGAATATGCAATAGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
GO:0000165 GO:0000166 GO:0000187 GO:0000302 GO:0001568 GO:0001772 GO:0001775 GO:0001784 GO:0001817 GO:0001819 GO:0001820 GO:0001932 GO:0001934 GO:0001944 GO:0001945 GO:0001959 GO:0002090 GO:0002092 GO:0002218 GO:0002220 GO:0002223 GO:0002238 GO:0002250 GO:0002252 GO:0002253 GO:0002263 GO:0002274 GO:0002275 GO:0002281 GO:0002283 GO:0002351 GO:0002366 GO:0002376 GO:0002429 GO:0002431 GO:0002433 GO:0002442 GO:0002520 GO:0002521 GO:0002532 GO:0002554 GO:0002576 GO:0002682 GO:0002684 GO:0002694 GO:0002696 GO:0002697 GO:0002699 GO:0002703 GO:0002705 GO:0002757 GO:0002758 GO:0002764 GO:0002768 GO:0002791 GO:0002793 GO:0002886 GO:0002888 GO:0003674 GO:0003824 GO:0004672 GO:0004674 GO:0004713 GO:0004715 GO:0005102 GO:0005178 GO:0005488 GO:0005515 GO:0005524 GO:0005575 GO:0005622 GO:0005623 GO:0005634 GO:0005737 GO:0005829 GO:0005886 GO:0005911 GO:0006082 GO:0006355 GO:0006464 GO:0006468 GO:0006606 GO:0006690 GO:0006691 GO:0006793 GO:0006796 GO:0006807 GO:0006810 GO:0006811 GO:0006812 GO:0006836 GO:0006837 GO:0006886 GO:0006887 GO:0006897 GO:0006898 GO:0006909 GO:0006913 GO:0006928 GO:0006935 GO:0006950 GO:0006952 GO:0006954 GO:0006955 GO:0006979 GO:0007154 GO:0007155 GO:0007159 GO:0007165 GO:0007166 GO:0007167 GO:0007169 GO:0007186 GO:0007229 GO:0007254 GO:0007257 GO:0007275 GO:0007596 GO:0007599 GO:0008104 GO:0008144 GO:0008150 GO:0008152 GO:0008283 GO:0008284 GO:0009058 GO:0009605 GO:0009607 GO:0009611 GO:0009617 GO:0009620 GO:0009636 GO:0009653 GO:0009719 GO:0009887 GO:0009889 GO:0009891 GO:0009893 GO:0009898 GO:0009966 GO:0009967 GO:0009987 GO:0010033 GO:0010035 GO:0010243 GO:0010468 GO:0010543 GO:0010556 GO:0010557 GO:0010562 GO:0010604 GO:0010646 GO:0010647 GO:0010803 GO:0015031 GO:0015696 GO:0015833 GO:0015844 GO:0015850 GO:0016020 GO:0016053 GO:0016192 GO:0016301 GO:0016310 GO:0016477 GO:0016740 GO:0016772 GO:0016773 GO:0017038 GO:0017076 GO:0017157 GO:0018105 GO:0018108 GO:0018193 GO:0018209 GO:0018212 GO:0019219 GO:0019220 GO:0019221 GO:0019222 GO:0019370 GO:0019538 GO:0019752 GO:0019814 GO:0019815 GO:0019897 GO:0019898 GO:0019899 GO:0019900 GO:0019901 GO:0019902 GO:0019904 GO:0022407 GO:0022409 GO:0022610 GO:0023014 GO:0023051 GO:0023052 GO:0023056 GO:0030054 GO:0030097 GO:0030098 GO:0030100 GO:0030139 GO:0030154 GO:0030155 GO:0030168 GO:0030193 GO:0030217 GO:0030554 GO:0030593 GO:0030595 GO:0031098 GO:0031234 GO:0031323 GO:0031325 GO:0031326 GO:0031328 GO:0031347 GO:0031349 GO:0031399 GO:0031401 GO:0031410 GO:0031623 GO:0031625 GO:0031952 GO:0031954 GO:0031982 GO:0032009 GO:0032101 GO:0032147 GO:0032268 GO:0032270 GO:0032303 GO:0032368 GO:0032386 GO:0032388 GO:0032479 GO:0032481 GO:0032501 GO:0032502 GO:0032553 GO:0032555 GO:0032559 GO:0032645 GO:0032672 GO:0032673 GO:0032725 GO:0032752 GO:0032753 GO:0032872 GO:0032874 GO:0032879 GO:0032880 GO:0032890 GO:0032928 GO:0032940 GO:0032944 GO:0032946 GO:0032991 GO:0033003 GO:0033005 GO:0033006 GO:0033008 GO:0033036 GO:0033077 GO:0033365 GO:0033554 GO:0033628 GO:0033630 GO:0033674 GO:0034097 GO:0034103 GO:0034105 GO:0034110 GO:0034504 GO:0034599 GO:0034613 GO:0034614 GO:0035239 GO:0035295 GO:0035325 GO:0035556 GO:0035639 GO:0035690 GO:0036094 GO:0036211 GO:0036230 GO:0038063 GO:0038065 GO:0038083 GO:0038093 GO:0038094 GO:0038095 GO:0038096 GO:0038110 GO:0038156 GO:0040011 GO:0042035 GO:0042060 GO:0042101 GO:0042102 GO:0042108 GO:0042110 GO:0042113 GO:0042116 GO:0042119 GO:0042127 GO:0042129 GO:0042169 GO:0042221 GO:0042325 GO:0042327 GO:0042330 GO:0042493 GO:0042542 GO:0042742 GO:0042886 GO:0043085 GO:0043112 GO:0043167 GO:0043168 GO:0043170 GO:0043207 GO:0043226 GO:0043227 GO:0043229 GO:0043231 GO:0043235 GO:0043269 GO:0043300 GO:0043302 GO:0043304 GO:0043306 GO:0043313 GO:0043366 GO:0043368 GO:0043383 GO:0043405 GO:0043406 GO:0043408 GO:0043410 GO:0043412 GO:0043436 GO:0043506 GO:0043507 GO:0043549 GO:0044070 GO:0044093 GO:0044237 GO:0044238 GO:0044249 GO:0044260 GO:0044267 GO:0044281 GO:0044283 GO:0044389 GO:0044424 GO:0044425 GO:0044444 GO:0044459 GO:0044464 GO:0044877 GO:0045055 GO:0045058 GO:0045059 GO:0045060 GO:0045061 GO:0045087 GO:0045088 GO:0045089 GO:0045124 GO:0045184 GO:0045309 GO:0045321 GO:0045335 GO:0045399 GO:0045401 GO:0045423 GO:0045425 GO:0045577 GO:0045579 GO:0045580 GO:0045582 GO:0045586 GO:0045588 GO:0045595 GO:0045597 GO:0045619 GO:0045621 GO:0045780 GO:0045785 GO:0045807 GO:0045859 GO:0045860 GO:0045921 GO:0045937 GO:0046328 GO:0046330 GO:0046394 GO:0046456 GO:0046631 GO:0046632 GO:0046634 GO:0046635 GO:0046637 GO:0046638 GO:0046640 GO:0046641 GO:0046643 GO:0046645 GO:0046649 GO:0046677 GO:0046777 GO:0046850 GO:0046852 GO:0046903 GO:0046907 GO:0048259 GO:0048260 GO:0048513 GO:0048514 GO:0048518 GO:0048522 GO:0048534 GO:0048583 GO:0048584 GO:0048731 GO:0048856 GO:0048869 GO:0048870 GO:0050670 GO:0050671 GO:0050707 GO:0050708 GO:0050714 GO:0050715 GO:0050730 GO:0050731 GO:0050764 GO:0050776 GO:0050778 GO:0050789 GO:0050790 GO:0050793 GO:0050794 GO:0050817 GO:0050818 GO:0050839 GO:0050848 GO:0050850 GO:0050851 GO:0050852 GO:0050853 GO:0050863 GO:0050864 GO:0050865 GO:0050867 GO:0050870 GO:0050871 GO:0050878 GO:0050896 GO:0050900 GO:0051046 GO:0051047 GO:0051049 GO:0051050 GO:0051090 GO:0051094 GO:0051128 GO:0051130 GO:0051169 GO:0051170 GO:0051171 GO:0051173 GO:0051174 GO:0051179 GO:0051219 GO:0051222 GO:0051223 GO:0051234 GO:0051239 GO:0051240 GO:0051246 GO:0051247 GO:0051249 GO:0051251 GO:0051252 GO:0051338 GO:0051347 GO:0051403 GO:0051641 GO:0051649 GO:0051674 GO:0051704 GO:0051707 GO:0051716 GO:0055094 GO:0060255 GO:0060326 GO:0060341 GO:0060627 GO:0060759 GO:0061041 GO:0065007 GO:0065008 GO:0065009 GO:0070201 GO:0070301 GO:0070302 GO:0070304 GO:0070372 GO:0070486 GO:0070489 GO:0070663 GO:0070665 GO:0070669 GO:0070727 GO:0070887 GO:0071216 GO:0071226 GO:0071236 GO:0071310 GO:0071345 GO:0071352 GO:0071402 GO:0071404 GO:0071593 GO:0071621 GO:0071702 GO:0071704 GO:0071705 GO:0071900 GO:0071902 GO:0071944 GO:0072358 GO:0072359 GO:0072594 GO:0072676 GO:0072678 GO:0080090 GO:0080134 GO:0080135 GO:0090087 GO:0090237 GO:0090322 GO:0090330 GO:0097159 GO:0097237 GO:0097367 GO:0097529 GO:0097530 GO:0097708 GO:0098542 GO:0098552 GO:0098562 GO:0098609 GO:0098657 GO:0098796 GO:0098797 GO:0098802 GO:0140029 GO:0140096 GO:1900046 GO:1900084 GO:1900086 GO:1901265 GO:1901363 GO:1901564 GO:1901568 GO:1901570 GO:1901576 GO:1901698 GO:1901700 GO:1901701 GO:1902105 GO:1902107 GO:1902531 GO:1902533 GO:1902563 GO:1903034 GO:1903037 GO:1903039 GO:1903305 GO:1903307 GO:1903506 GO:1903530 GO:1903532 GO:1903706 GO:1903708 GO:1904951 GO:1905952 GO:1990266 GO:2000026 GO:2000112 GO:2000191 GO:2000377 GO:2001141
KEGG Pathways
Metabolic & Signaling
ko04014 ko04064 ko04072 ko04151 ko04380 ko04611 ko04650 ko04658 ko04659 ko04660 ko04662 ko04664 ko04666 ko05152 ko05167 ko05169 ko05203 ko05340 map04014 map04064 map04072 map04151 map04380 map04611 map04650 map04658 map04659 map04660 map04662 map04664 map04666 map05152 map05167 map05169 map05203 map05340
Pfam Domains
Protein Families
Pkinase_Tyr SH2

Protein Analysis

391

Amino Acids

42.15

Weight (kDa)

9.62

Isoelectric Point (pI)

47.73

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 589
AccB1I GGYRCC 3 cut(s) 331, 337, 674
AciI CCGC 3 cut(s) 103, 106, 353
AclI AACGTT 1 cut(s) 934
AclWI GGATC 2 cut(s) 10, 77
AcoI YGGCCR 2 cut(s) 489, 783
AcsI RAATTY 2 cut(s) 758, 966
AcyI GRCGYC 5 cut(s) 212, 260, 296, 302, 344
AdeI CACNNNGTG 1 cut(s) 749
AfaI GTAC 3 cut(s) 61, 448, 867
AgeI ACCGGT 2 cut(s) 181, 334
AgsI TTSAA 4 cut(s) 620, 685, 794, 899
AjuI GAANNNNNNNTTGG 2 cut(s) 654, 686
AluBI AGCT 4 cut(s) 99, 738, 919, 1022
AluI AGCT 4 cut(s) 99, 738, 919, 1022
Alw26I GTCTC 2 cut(s) 124, 505
AlwI GGATC 2 cut(s) 10, 77
Ama87I CYCGRG 1 cut(s) 960
AoxI GGCC 2 cut(s) 489, 783
ApeKI GCWGC 4 cut(s) 349, 370, 382, 916
ApoI RAATTY 2 cut(s) 758, 966
ArsI GACNNNNNNTTYG 2 cut(s) 1113, 1145
AsiGI ACCGGT 2 cut(s) 181, 334
AspLEI GCGC 1 cut(s) 280
AsuHPI GGTGA 5 cut(s) 20, 106, 196, 331, 671
AsuNHI GCTAGC 1 cut(s) 1022
AvaI CYCGRG 1 cut(s) 960
BaeGI GKGCMC 1 cut(s) 692
BalI TGGCCA 1 cut(s) 785
BanI GGYRCC 3 cut(s) 331, 337, 674
BarI GAAGNNNNNNTAC 2 cut(s) 831, 863
BbsI GAAGAC 1 cut(s) 587
BbvI GCAGC 4 cut(s) 336, 357, 369, 928
BccI CCATC 2 cut(s) 1069, 1091
BceAI ACGGC 7 cut(s) 225, 267, 273, 285, 340, 662, 740
BcgI CGANNNNNNTGC 6 cut(s) 219, 253, 279, 297, 313, 331
BcoDI GTCTC 2 cut(s) 124, 505
BfaI CTAG 2 cut(s) 990, 1023
BfoI RGCGCY 1 cut(s) 281
BglII AGATCT 1 cut(s) 404
BisI GCNGC 6 cut(s) 106, 350, 353, 371, 383, 917
BlsI GCNGC 6 cut(s) 107, 351, 354, 372, 384, 918
BmcAI AGTACT 1 cut(s) 61
BmeT110I CYCGRG 1 cut(s) 960
BmiI GGNNCC 4 cut(s) 333, 339, 676, 1152
BmrI ACTGGG 1 cut(s) 51
BmsI GCATC 3 cut(s) 281, 323, 485
BmtI GCTAGC 1 cut(s) 1026
BmuI ACTGGG 1 cut(s) 51
BpiI GAAGAC 1 cut(s) 587
BpmI CTGGAG 1 cut(s) 1137
BpuEI CTTGAG 1 cut(s) 1092
Bsa29I ATCGAT 1 cut(s) 428
BsaBI GATNNNNATC 2 cut(s) 434, 437
BsaHI GRCGYC 5 cut(s) 212, 260, 296, 302, 344
BsaWI WCCGGW 2 cut(s) 181, 334
BsaXI ACNNNNNCTCC 2 cut(s) 17, 47
Bse118I RCCGGY 5 cut(s) 181, 280, 334, 340, 361
Bse1I ACTGG 1 cut(s) 57
Bse3DI GCAATG 2 cut(s) 50, 593
Bse8I GATNNNNATC 2 cut(s) 434, 437
BseCI ATCGAT 1 cut(s) 428
BseGI GGATG 2 cut(s) 500, 1080
BseJI GATNNNNATC 2 cut(s) 434, 437
BseMI GCAATG 2 cut(s) 50, 593
BseMII CTCAG 1 cut(s) 529
BseNI ACTGG 1 cut(s) 57
BseSI GKGCMC 1 cut(s) 692
BseXI GCAGC 4 cut(s) 336, 357, 369, 928
BshFI GGCC 2 cut(s) 491, 785
BshNI GGYRCC 3 cut(s) 331, 337, 674
BshTI ACCGGT 2 cut(s) 181, 334
BshVI ATCGAT 1 cut(s) 428
BsiHKCI CYCGRG 1 cut(s) 960
BsiSI CCGG 6 cut(s) 182, 281, 335, 341, 362, 492
BsmAI GTCTC 2 cut(s) 124, 505
BsmBI CGTCTC 1 cut(s) 124
BsnI GGCC 2 cut(s) 491, 785
BsoBI CYCGRG 1 cut(s) 960
Bsp1286I GDGCHC 1 cut(s) 692
Bsp143I GATC 3 cut(s) 15, 82, 404
BspACI CCGC 3 cut(s) 103, 106, 353
BspANI GGCC 2 cut(s) 491, 785
BspCNI CTCAG 1 cut(s) 528
BspDI ATCGAT 1 cut(s) 428
BspHI TCATGA 2 cut(s) 393, 979
BspLI GGNNCC 4 cut(s) 333, 339, 676, 1152
BspOI GCTAGC 1 cut(s) 1026
BspPI GGATC 2 cut(s) 10, 77
BspT107I GGYRCC 3 cut(s) 331, 337, 674
BsrDI GCAATG 2 cut(s) 50, 593
BsrFI RCCGGY 5 cut(s) 181, 280, 334, 340, 361
BsrI ACTGG 1 cut(s) 57
BssAI RCCGGY 5 cut(s) 181, 280, 334, 340, 361
BssMI GATC 3 cut(s) 15, 82, 404
BssNI GRCGYC 5 cut(s) 212, 260, 296, 302, 344
Bst4CI ACNGT 5 cut(s) 118, 141, 378, 523, 586
BstACI GRCGYC 5 cut(s) 212, 260, 296, 302, 344
BstC8I GCNNGC 3 cut(s) 282, 342, 1024
BstDEI CTNAG 2 cut(s) 515, 995
BstF5I GGATG 2 cut(s) 500, 1080
BstH2I RGCGCY 1 cut(s) 281
BstHHI GCGC 1 cut(s) 280
BstKTI GATC 3 cut(s) 18, 85, 407
BstMAI GTCTC 2 cut(s) 124, 505
BstMBI GATC 3 cut(s) 15, 82, 404
BstMWI GCNNNNNNNGC 6 cut(s) 105, 346, 358, 367, 379, 504
BstSLI GKGCMC 1 cut(s) 692
BstV1I GCAGC 4 cut(s) 336, 357, 369, 928
BstV2I GAAGAC 1 cut(s) 587
BstX2I RGATCY 1 cut(s) 404
BstYI RGATCY 1 cut(s) 404
Bsu15I ATCGAT 1 cut(s) 428
BsuRI GGCC 2 cut(s) 491, 785
BsuTUI ATCGAT 1 cut(s) 428
BtsCI GGATG 2 cut(s) 500, 1080
BtsI GCAGTG 1 cut(s) 146
BtsIMutI CAGTG 1 cut(s) 146
Cac8I GCNNGC 3 cut(s) 282, 342, 1024
CciI TCATGA 2 cut(s) 393, 979
CfoI GCGC 1 cut(s) 280
Cfr10I RCCGGY 5 cut(s) 181, 280, 334, 340, 361
ClaI ATCGAT 1 cut(s) 428
CseI GACGC 6 cut(s) 201, 249, 285, 291, 315, 333
Csp6I GTAC 3 cut(s) 60, 447, 866
CspAI ACCGGT 2 cut(s) 181, 334
CviAII CATG 6 cut(s) 13, 394, 707, 940, 980, 1147
CviQI GTAC 3 cut(s) 60, 447, 866
DdeI CTNAG 2 cut(s) 515, 995
DpnI GATC 3 cut(s) 17, 84, 406
DpnII GATC 3 cut(s) 15, 82, 404
DraI TTTAAA 2 cut(s) 126, 1017
DraIII CACNNNGTG 1 cut(s) 749
DrdI GACNNNNNNGTC 1 cut(s) 589
DseDI GACNNNNNNGTC 1 cut(s) 589
EaeI YGGCCR 2 cut(s) 489, 783
Eco88I CYCGRG 1 cut(s) 960
Esp3I CGTCTC 1 cut(s) 124
FaeI CATG 6 cut(s) 16, 397, 710, 943, 983, 1150
FatI CATG 6 cut(s) 12, 393, 706, 939, 979, 1146
FauI CCCGC 1 cut(s) 110
Fnu4HI GCNGC 6 cut(s) 106, 350, 353, 371, 383, 917
FokI GGATG 2 cut(s) 507, 1087
Fsp4HI GCNGC 6 cut(s) 106, 350, 353, 371, 383, 917
FspBI CTAG 2 cut(s) 990, 1023
GlaI GCGC 1 cut(s) 279
GluI GCNGC 6 cut(s) 106, 350, 353, 371, 383, 917
GsuI CTGGAG 1 cut(s) 1137
HaeII RGCGCY 1 cut(s) 281
HaeIII GGCC 2 cut(s) 491, 785
HapII CCGG 6 cut(s) 182, 281, 335, 341, 362, 492
HgaI GACGC 6 cut(s) 201, 249, 285, 291, 315, 333
HhaI GCGC 1 cut(s) 280
Hin1I GRCGYC 5 cut(s) 212, 260, 296, 302, 344
Hin1II CATG 6 cut(s) 16, 397, 710, 943, 983, 1150
Hin6I GCGC 1 cut(s) 278
HinP1I GCGC 1 cut(s) 278
HinfI GANTC 6 cut(s) 513, 590, 954, 986, 1051, 1125
HpaII CCGG 6 cut(s) 182, 281, 335, 341, 362, 492
HphI GGTGA 5 cut(s) 20, 106, 196, 331, 671
Hpy188I TCNGA 5 cut(s) 518, 643, 765, 1066, 1133
Hpy188III TCNNGA 6 cut(s) 394, 408, 881, 980, 1010, 1154
HpyAV CCTTC 6 cut(s) 181, 214, 238, 400, 656, 827
HpyCH4III ACNGT 5 cut(s) 118, 141, 378, 523, 586
HpyCH4IV ACGT 2 cut(s) 27, 934
HpyCH4V TGCA 8 cut(s) 4, 50, 230, 598, 626, 754, 939, 1163
HpyF10VI GCNNNNNNNGC 6 cut(s) 105, 346, 358, 367, 379, 504
HpyF3I CTNAG 2 cut(s) 515, 995
HpySE526I ACGT 2 cut(s) 27, 934
Hsp92I GRCGYC 5 cut(s) 212, 260, 296, 302, 344
Hsp92II CATG 6 cut(s) 16, 397, 710, 943, 983, 1150
HspAI GCGC 1 cut(s) 278
KroI GCCGGC 2 cut(s) 280, 340
KroNI GCCGGC 2 cut(s) 282, 342
Kzo9I GATC 3 cut(s) 15, 82, 404
LmnI GCTCC 3 cut(s) 104, 743, 1156
Lsp1109I GCAGC 4 cut(s) 336, 357, 369, 928
LweI GCATC 3 cut(s) 281, 323, 485
MaeI CTAG 2 cut(s) 990, 1023
MaeII ACGT 2 cut(s) 27, 934
MaeIII GTNAC 4 cut(s) 8, 144, 319, 1142
MalI GATC 3 cut(s) 17, 84, 406
MboI GATC 3 cut(s) 15, 82, 404
MboII GAAGA 6 cut(s) 423, 589, 592, 851, 968, 995
MflI RGATCY 1 cut(s) 404
MhlI GDGCHC 1 cut(s) 692
MlsI TGGCCA 1 cut(s) 785
MluCI AATT 5 cut(s) 599, 653, 758, 886, 966
MluNI TGGCCA 1 cut(s) 785
MlyI GAGTC 3 cut(s) 507, 599, 1134
MmeI TCCRAC 1 cut(s) 1111
MnlI CCTC 8 cut(s) 122, 189, 433, 659, 763, 804, 944, 956
Mox20I TGGCCA 1 cut(s) 785
MroNI GCCGGC 2 cut(s) 280, 340
MscI TGGCCA 1 cut(s) 785
MseI TTAA 2 cut(s) 125, 1016
Msp20I TGGCCA 1 cut(s) 785
MspA1I CMGCKG 1 cut(s) 919
MspI CCGG 6 cut(s) 182, 281, 335, 341, 362, 492
MwoI GCNNNNNNNGC 6 cut(s) 105, 346, 358, 367, 379, 504
NaeI GCCGGC 2 cut(s) 282, 342
NdeII GATC 3 cut(s) 15, 82, 404
NgoMIV GCCGGC 2 cut(s) 280, 340
NheI GCTAGC 1 cut(s) 1022
NlaIII CATG 6 cut(s) 16, 397, 710, 943, 983, 1150
NlaIV GGNNCC 4 cut(s) 333, 339, 676, 1152
NmuCI GTSAC 3 cut(s) 8, 144, 319
PaeR7I CTCGAG 1 cut(s) 960
PagI TCATGA 2 cut(s) 393, 979
PcsI WCGNNNNNNNCGW 6 cut(s) 215, 257, 263, 323, 353, 374
PdiI GCCGGC 2 cut(s) 282, 342
PfeI GAWTC 3 cut(s) 954, 986, 1051
PflFI GACNNNGTC 3 cut(s) 211, 259, 325
PinAI ACCGGT 2 cut(s) 181, 334
PkrI GCNGC 6 cut(s) 107, 351, 354, 372, 384, 918
PleI GAGTC 3 cut(s) 507, 598, 1133
PpsI GAGTC 3 cut(s) 507, 598, 1133
Psp1406I AACGTT 1 cut(s) 934
PspN4I GGNNCC 4 cut(s) 333, 339, 676, 1152
PspXI VCTCGAGB 1 cut(s) 960
PsrI GAACNNNNNNTAC 2 cut(s) 439, 471
PsuI RGATCY 1 cut(s) 404
PsyI GACNNNGTC 3 cut(s) 211, 259, 325
PvuII CAGCTG 1 cut(s) 919
RsaI GTAC 3 cut(s) 61, 448, 867
RsaNI GTAC 3 cut(s) 60, 447, 866
SaqAI TTAA 2 cut(s) 125, 1016
SatI GCNGC 6 cut(s) 106, 350, 353, 371, 383, 917
Sau3AI GATC 3 cut(s) 15, 82, 404
ScaI AGTACT 1 cut(s) 61
SchI GAGTC 3 cut(s) 507, 599, 1134
SduI GDGCHC 1 cut(s) 692
SfaNI GCATC 3 cut(s) 281, 323, 485
Sfr274I CTCGAG 1 cut(s) 960
SgrAI CRCCGGYG 2 cut(s) 181, 334
SlaI CTCGAG 1 cut(s) 960
SmlI CTYRAG 2 cut(s) 960, 1107
SmoI CTYRAG 2 cut(s) 960, 1107
Sse9I AATT 5 cut(s) 599, 653, 758, 886, 966
SsiI CCGC 3 cut(s) 103, 106, 353
SspMI CTAG 2 cut(s) 990, 1023
TaaI ACNGT 5 cut(s) 118, 141, 378, 523, 586
TaiI ACGT 2 cut(s) 30, 937
TaqI TCGA 5 cut(s) 428, 588, 731, 929, 961
TasI AATT 5 cut(s) 599, 653, 758, 886, 966
TatI WGTACW 1 cut(s) 59
TauI GCSGC 2 cut(s) 108, 355
TfiI GAWTC 3 cut(s) 954, 986, 1051
Tru1I TTAA 2 cut(s) 125, 1016
Tru9I TTAA 2 cut(s) 125, 1016
TscAI CASTG 1 cut(s) 153
TseFI GTSAC 3 cut(s) 8, 144, 319
TseI GCWGC 4 cut(s) 349, 370, 382, 916
Tsp45I GTSAC 3 cut(s) 8, 144, 319
TspDTI ATGAA 7 cut(s) 382, 590, 723, 873, 968, 996, 1064
TspRI CASTG 1 cut(s) 153
Tth111I GACNNNGTC 3 cut(s) 211, 259, 325
XapI RAATTY 2 cut(s) 758, 966
XhoI CTCGAG 1 cut(s) 960
XspI CTAG 2 cut(s) 990, 1023
ZrmI AGTACT 1 cut(s) 61
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.