RchiOBHm_Chr5g0004191

protein serine/threonine kinase activity

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000699
Physical Location & Seq
Forward (+)
2636952 .. 2639791
2840 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ28547

Sequence Viewer

Length: 1884 bp
ATGGCAGAAGTGGTCCTTCTCTTCCTTTCAATGGTTGCCTTGCTCGGCTTTCCCACTACAAAAGCCGACTATCTCGCCCATGTCTGCCCAAACACCACCGTCTTCACCCCAAACTCCATCTTCCAAACCAATCGCGACCAATTGCTGTATACCCTTGTCGATAATGCCAGCCGTGACACCGGTTTTTACCAGACCACTGCTGGCAACCAGATCTCAGAGGAGACAGTGGACGGCCTCTTCCTCTGCCGCGGTGACGTGTCCGCAGACGCTTGCAGAGTCTGCGTGTACACCGCGGCCTCAAAGGTTGTCCAAATGTGTCCCGTCGAGAAACAGGTTGTCATATGGTACGACGACTGCATGGTACGCTACTCTAACCAGTCATTTCTTTCTACCGCGGAAGACTCACCTTGGGTCTTCATGAGGAACACCACGAATGCGACGCAGGTTGGAGATAATAGAACAACCCTATTTAACCAGGTTCTAGCAAATACCATGATTGGGCTAGTCCTTGAGGTTCTCATCGCCGCTGATAAGTTTGCAACCAAAGAAGATTCTACAGTGTTTACTACGCTGTACACCCTCGGACAGTGCACGCAGGATCTGCCCACACCAAATTGCAGTGGGTGTCTTACAGGAGCCATAGCACGACTTCCATTTTGCTGTAGTGGAAAACTAGGGGGAAGAGTTCTGTATCCAAGTTGTAATATTAGGTACGAGGTGTACCCCTTCTATTCATCACCTCCTCCGCCAGCCCCAGTGGCAACGGTACGTAAAGGAAAAAATAAACTCTCATCCATAGTCATTCCTAGCATTCTTGCTCCAGTTGCTCTCTGTGTGCTAGTTGTGGTTGTGGCCGGATGTTTCATTCGCAAATTAAAAAGAGCCAAACGACAACAAAATGAAGCCGAAAATGATATGACAACTGTTGAATCCTTGCAATTTGACTTGGGAATTATCGAAGCTGCCACGAAAAAGTTTTCTGCCGATAACATGTTAGGTGAAGGCGGATTTGGTCAAGTTTTCAAGGGAACACTTGATAATGAACAAGAAATAGCTGTGAAGAGGCTGTCAAAAAACTCTGGACAAGGTGTACGAGAGTTTAAGAACGAGGTTTTATTGGTAGCAAAGCTTCAACATAGGAATCTCGTAAAGCTTCTAGGGTTTTGCTTGGGAGGAGAAGAAACACTACTTGTCTATGAATATGTGCCCAACAAAAGTCTTGATTATTTTCTATTTGAACAACTGGATTGGTCGAGACGCTGCACCATAATAGGAGGAATCGCTCGAGGAATCCTCTATCTTCATGAAGATTCTAGGCTTCGAGTTATACATCGTGATTTGAAAGCTAGCAATATCTTGTTGGATGCTAGTTTGAATCCAAAAATTTCAGATTTTGGAATGGCAAGAATGTTTGGAGTTGATGATCAAACGCAAGGAAGCACGAGAAGAATTGTTGGCACTTATGGTTACATGGCTCCAGAATATGCTATGGAGGGATTGTATTCTATAAAATCTGATGTCTTCAGCTTCGGAATACTCTTGCTTGAGATCCTAACGGGAAGAAAGAACTTTTTAGGCTTTCATCCCACAACTCCTGAACCGACTCTTCTCAGTTATGCTTGGCGATTATGGAACGAAGGAAAAGTGTTGGAGTTGATGGATCCATTGCTGAAATATTCATTCAATCCAAAGGAGTTCTTGAGATACATCCACATTGGATTATTGTGTGTTCAAGAAGACGCAAACAATAGGCCAACCATGTCGTCGGTTGTTCTAATGTTAAAGAGTGAAAATATCAGACTTTCCAAACCTGAGCGACCTGCCTTCTTTACAGGAAGATCTATCAATGATCACTGCCATACATTAGGGGATTTACACTACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
DUF3403 Pkinase Pkinase_Tyr Stress-antifung

Protein Analysis

627

Amino Acids

69.96

Weight (kDa)

7.06

Isoelectric Point (pI)

39.48

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Stress-antifung PF01657 29 - 126 9e-23 Salt stress response/antifungal
Stress-antifung PF01657 154 - 240 3e-09 Salt stress response/antifungal
Pkinase PF00069 328 - 527 1.2e-42 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 329 - 591 3.4e-47 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000699)

Species Orthologous Gene IDs
arabidopsis_thaliana AT1G61750
fragaria_vesca FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754 FvH4_3g02754
malus_domestica MD02G1101300.v1.1 MD05G1031700.v1.1 MD05G1031800.v1.1 MD05G1032400.v1.1 MD05G1032600.v1.1 MD05G1337700.v1.1 MD05G1337900.v1.1 MD05G1340100.v1.1 MD05G1340400.v1.1 MD16G1096700.v1.1
prunus_persica Prupe.4G027600_v2.0.a1 Prupe.8G039200_v2.0.a1
pyrus_communis pycom05g02310 pycom05g02330 pycom05g02340 pycom05g30920
rosa_chinensis RchiOBHm_Chr2g0121501 RchiOBHm_Chr2g0122141 RchiOBHm_Chr5g0004191 RchiOBHm_Chr6g0265241 RchiOBHm_Chr7g0215811 RchiOBHm_Chr7g0215821 RchiOBHm_Chr7g0219681
rosa_laevigata RLG00000002617 RLG00000018618 RLG00000018623 RLG00000031211
rosa_multiflora Rmu_sc0000079.1_g000015 Rmu_sc0000315.1_g000072 Rmu_sc0000315.1_g000093 Rmu_sc0000547.1_g000005 Rmu_sc0000805.1_g000048 Rmu_sc0001851.1_g000024 Rmu_sc0004379.1_g000017 Rmu_sc0004574.1_g000057 Rmu_sc0004689.1_g000004 Rmu_sc0004964.1_g000019 Rmu_sc0007799.1_g000001 Rmu_sc0007868.1_g000012 Rmu_ssc0000359.1_g000013
rosa_roxburghii Rroxscaffold_175G00432180 Rroxscaffold_1G00071500 Rroxscaffold_1G00071530 Rroxscaffold_1G00071780 Rroxscaffold_2G00122400 Rroxscaffold_2G00122420
rosa_rugosa Rorug06G0063800
rosa_samantha Rh2AG290300 Rh2BG301100 Rh2CG279800 Rh5CG038400 Rh5CG040800 Rh5DG036900 Rh6CG182400 Rh6DG173600 Rh7CG314200 Rh7DG297100
rosa_wichuraiana Rw0G021200 Rw0G021210 Rw2G023270 Rw2G023510 Rw5G003650 Rw5G030050 Rw6G011890 Rw7G024980

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc36I ACCTGC 2 cut(s) 433, 1828
AccI GTMKAC 1 cut(s) 149
AccII CGCG 4 cut(s) 135, 249, 293, 395
AclWI GGATC 4 cut(s) 606, 1543, 1655, 1668
AcoI YGGCCR 1 cut(s) 852
AcsI RAATTY 1 cut(s) 1383
AcuI CTGAAG 1 cut(s) 1507
AfaI GTAC 8 cut(s) 287, 347, 363, 575, 713, 722, 768, 1092
AfiI CCNNNNNNNGG 2 cut(s) 31, 498
AflIII ACRYGT 2 cut(s) 255, 990
AgeI ACCGGT 1 cut(s) 179
AgsI TTSAA 9 cut(s) 30, 929, 1024, 1133, 1238, 1342, 1375, 1684, 1733
AjiI CACGTC 1 cut(s) 256
AjnI CCWGG 1 cut(s) 474
AjuI GAANNNNNNNTTGG 2 cut(s) 993, 1025
AluBI AGCT 6 cut(s) 962, 1055, 1129, 1153, 1346, 1527
AluI AGCT 6 cut(s) 962, 1055, 1129, 1153, 1346, 1527
Alw21I GWGCWC 1 cut(s) 593
Alw26I GTCTC 2 cut(s) 215, 1249
Alw44I GTGCAC 1 cut(s) 589
AlwI GGATC 4 cut(s) 606, 1543, 1655, 1668
AlwNI CAGNNNCTG 2 cut(s) 279, 601
Ama87I CYCGRG 1 cut(s) 1284
AoxI GGCC 4 cut(s) 232, 294, 852, 1751
ApaLI GTGCAC 1 cut(s) 589
ApeKI GCWGC 2 cut(s) 962, 1260
ApoI RAATTY 1 cut(s) 1383
ArsI GACNNNNNNTTYG 2 cut(s) 639, 671
AsiGI ACCGGT 1 cut(s) 179
AspS9I GGNCC 1 cut(s) 13
AsuHPI GGTGA 5 cut(s) 97, 263, 396, 729, 1010
AsuNHI GCTAGC 1 cut(s) 1346
AvaI CYCGRG 1 cut(s) 1284
AvaII GGWCC 1 cut(s) 13
BaeGI GKGCMC 2 cut(s) 593, 1209
BamHI GGATCC 1 cut(s) 1660
BarI GAAGNNNNNNTAC 4 cut(s) 1113, 1145, 1170, 1202
BauI CACGAG 1 cut(s) 1441
BbsI GAAGAC 5 cut(s) 94, 405, 406, 1513, 1743
Bbv12I GWGCWC 1 cut(s) 593
BbvI GCAGC 2 cut(s) 949, 1247
BccI CCATC 2 cut(s) 125, 1651
BceAI ACGGC 2 cut(s) 156, 247
BciT130I CCWGG 1 cut(s) 476
BciVI GTATCC 1 cut(s) 702
BclI TGATCA 2 cut(s) 1423, 1849
BcoDI GTCTC 2 cut(s) 215, 1249
BfmI CTRYAG 2 cut(s) 555, 661
BfuAI ACCTGC 2 cut(s) 433, 1828
BfuI GTATCC 1 cut(s) 702
BglI GCCNNNNNGGC 1 cut(s) 758
BglII AGATCT 2 cut(s) 210, 1838
BisI GCNGC 5 cut(s) 247, 294, 525, 963, 1261
BlsI GCNGC 5 cut(s) 248, 295, 526, 964, 1262
Bme1390I CCNGG 1 cut(s) 476
Bme18I GGWCC 1 cut(s) 13
BmeT110I CYCGRG 1 cut(s) 1284
BmgBI CACGTC 1 cut(s) 256
BmgT120I GGNCC 1 cut(s) 13
BmiI GGNNCC 3 cut(s) 637, 1476, 1662
BmrFI CCNGG 1 cut(s) 476
BmrI ACTGGG 1 cut(s) 749
BmsI GCATC 1 cut(s) 1354
BmtI GCTAGC 1 cut(s) 1350
BmuI ACTGGG 1 cut(s) 749
BpiI GAAGAC 5 cut(s) 94, 405, 406, 1513, 1743
BplI GAGNNNNNCTC 2 cut(s) 1278, 1310
BpmI CTGGAG 2 cut(s) 804, 1461
Bpu10I CCTNAGC 1 cut(s) 1812
BpuEI CTTGAG 3 cut(s) 530, 1565, 1720
BsaAI YACGTR 1 cut(s) 770
BsaJI CCNNGG 5 cut(s) 247, 291, 393, 407, 580
BsaWI WCCGGW 1 cut(s) 179
BsaXI ACNNNNNCTCC 2 cut(s) 1484, 1514
Bsc4I CCNNNNNNNGG 2 cut(s) 31, 498
Bse118I RCCGGY 1 cut(s) 179
Bse1I ACTGG 4 cut(s) 376, 755, 821, 1248
Bse3DI GCAATG 1 cut(s) 1664
BseBI CCWGG 1 cut(s) 476
BseDI CCNNGG 5 cut(s) 247, 291, 393, 407, 580
BseGI GGATG 5 cut(s) 791, 863, 1369, 1582, 1707
BseLI CCNNNNNNNGG 2 cut(s) 31, 498
BseMI GCAATG 1 cut(s) 1664
BseMII CTCAG 3 cut(s) 228, 1624, 1803
BseNI ACTGG 4 cut(s) 376, 755, 821, 1248
BseRI GAGGAG 3 cut(s) 233, 732, 1188
BseSI GKGCMC 2 cut(s) 593, 1209
BseXI GCAGC 2 cut(s) 949, 1247
BsgI GTGCAG 1 cut(s) 1246
Bsh1236I CGCG 4 cut(s) 135, 249, 293, 395
BshFI GGCC 4 cut(s) 234, 296, 854, 1753
BshTI ACCGGT 1 cut(s) 179
BsiHKAI GWGCWC 1 cut(s) 593
BsiHKCI CYCGRG 1 cut(s) 1284
BsiSI CCGG 2 cut(s) 180, 855
BslFI GGGAC 1 cut(s) 303
BslI CCNNNNNNNGG 2 cut(s) 31, 498
BsmAI GTCTC 2 cut(s) 215, 1249
BsmBI CGTCTC 1 cut(s) 1249
BsmFI GGGAC 1 cut(s) 303
BsmI GAATGC 2 cut(s) 439, 810
BsnI GGCC 4 cut(s) 234, 296, 854, 1753
BsoBI CYCGRG 1 cut(s) 1284
Bsp1286I GDGCHC 2 cut(s) 593, 1209
Bsp1407I TGTACA 2 cut(s) 285, 573
Bsp143I GATC 7 cut(s) 210, 598, 1423, 1548, 1660, 1838, 1849
Bsp68I TCGCGA 1 cut(s) 135
BspANI GGCC 4 cut(s) 234, 296, 854, 1753
BspCNI CTCAG 3 cut(s) 227, 1623, 1804
BspFNI CGCG 4 cut(s) 135, 249, 293, 395
BspHI TCATGA 2 cut(s) 417, 1303
BspLI GGNNCC 3 cut(s) 637, 1476, 1662
BspMI ACCTGC 2 cut(s) 433, 1828
BspOI GCTAGC 1 cut(s) 1350
BspPI GGATC 4 cut(s) 606, 1543, 1655, 1668
BsrDI GCAATG 1 cut(s) 1664
BsrFI RCCGGY 1 cut(s) 179
BsrGI TGTACA 2 cut(s) 285, 573
BsrI ACTGG 4 cut(s) 376, 755, 821, 1248
BssAI RCCGGY 1 cut(s) 179
BssECI CCNNGG 5 cut(s) 247, 291, 393, 407, 580
BssMI GATC 7 cut(s) 210, 598, 1423, 1548, 1660, 1838, 1849
BssNAI GTATAC 1 cut(s) 150
BssSI CACGAG 1 cut(s) 1441
BssT1I CCWWGG 1 cut(s) 407
Bst1107I GTATAC 1 cut(s) 150
Bst2BI CACGAG 1 cut(s) 1441
Bst2UI CCWGG 1 cut(s) 476
Bst4CI ACNGT 6 cut(s) 100, 226, 559, 588, 766, 925
Bst6I CTCTTC 5 cut(s) 26, 242, 676, 1055, 1611
BstAPI GCANNNNNTGC 2 cut(s) 279, 601
BstAUI TGTACA 2 cut(s) 285, 573
BstBAI YACGTR 1 cut(s) 770
BstC8I GCNNGC 6 cut(s) 169, 202, 271, 593, 750, 1348
BstDEI CTNAG 3 cut(s) 214, 1610, 1812
BstDSI CCRYGG 3 cut(s) 247, 291, 393
BstF5I GGATG 5 cut(s) 791, 863, 1369, 1582, 1707
BstFNI CGCG 4 cut(s) 135, 249, 293, 395
BstKTI GATC 7 cut(s) 213, 601, 1426, 1551, 1663, 1841, 1852
BstMAI GTCTC 2 cut(s) 215, 1249
BstMBI GATC 7 cut(s) 210, 598, 1423, 1548, 1660, 1838, 1849
BstMWI GCNNNNNNNGC 5 cut(s) 279, 363, 601, 758, 824
BstNI CCWGG 1 cut(s) 476
BstNSI RCATGY 1 cut(s) 994
BstSCI CCNGG 1 cut(s) 474
BstSFI CTRYAG 2 cut(s) 555, 661
BstSLI GKGCMC 2 cut(s) 593, 1209
BstSNI TACGTA 1 cut(s) 770
BstUI CGCG 4 cut(s) 135, 249, 293, 395
BstV1I GCAGC 2 cut(s) 949, 1247
BstV2I GAAGAC 5 cut(s) 94, 405, 406, 1513, 1743
BstX2I RGATCY 5 cut(s) 210, 598, 1548, 1660, 1838
BstYI RGATCY 5 cut(s) 210, 598, 1548, 1660, 1838
BstZ17I GTATAC 1 cut(s) 150
BsuI GTATCC 1 cut(s) 702
BsuRI GGCC 4 cut(s) 234, 296, 854, 1753
BtgI CCRYGG 3 cut(s) 247, 291, 393
BtgZI GCGATG 1 cut(s) 505
BtrI CACGTC 1 cut(s) 256
BtsCI GGATG 5 cut(s) 791, 863, 1369, 1582, 1707
BtsI GCAGTG 3 cut(s) 195, 625, 1852
BtsIMutI CAGTG 7 cut(s) 195, 231, 564, 593, 625, 762, 1852
BtuMI TCGCGA 1 cut(s) 135
BveI ACCTGC 2 cut(s) 433, 1828
Cac8I GCNNGC 6 cut(s) 169, 202, 271, 593, 750, 1348
CaiI CAGNNNCTG 2 cut(s) 279, 601
CciI TCATGA 2 cut(s) 417, 1303
Cfr10I RCCGGY 1 cut(s) 179
Cfr13I GGNCC 1 cut(s) 13
Cfr42I CCGCGG 3 cut(s) 250, 294, 396
CseI GACGC 4 cut(s) 275, 448, 1266, 1748
CsiI ACCWGGT 1 cut(s) 474
Csp6I GTAC 8 cut(s) 286, 346, 362, 574, 712, 721, 767, 1091
CspAI ACCGGT 1 cut(s) 179
CviAII CATG 8 cut(s) 80, 358, 418, 493, 991, 1304, 1471, 1759
CviQI GTAC 8 cut(s) 286, 346, 362, 574, 712, 721, 767, 1091
DdeI CTNAG 3 cut(s) 214, 1610, 1812
DpnI GATC 7 cut(s) 212, 600, 1425, 1550, 1662, 1840, 1851
DpnII GATC 7 cut(s) 210, 598, 1423, 1548, 1660, 1838, 1849
EaeI YGGCCR 1 cut(s) 852
Eam1104I CTCTTC 5 cut(s) 26, 242, 676, 1055, 1611
EarI CTCTTC 5 cut(s) 26, 242, 676, 1055, 1611
EciI GGCGGA 2 cut(s) 735, 1020
Eco105I TACGTA 1 cut(s) 770
Eco130I CCWWGG 1 cut(s) 407
Eco47I GGWCC 1 cut(s) 13
Eco57I CTGAAG 1 cut(s) 1507
Eco88I CYCGRG 1 cut(s) 1284
EcoRII CCWGG 1 cut(s) 474
EcoT14I CCWWGG 1 cut(s) 407
ErhI CCWWGG 1 cut(s) 407
Esp3I CGTCTC 1 cut(s) 1249
FaeI CATG 8 cut(s) 83, 361, 421, 496, 994, 1307, 1474, 1762
FalI AAGNNNNNCTT 3 cut(s) 32, 1682, 1714
FaqI GGGAC 1 cut(s) 303
FatI CATG 8 cut(s) 79, 357, 417, 492, 990, 1303, 1470, 1758
FauNDI CATATG 1 cut(s) 341
FbaI TGATCA 2 cut(s) 1423, 1849
FblI GTMKAC 1 cut(s) 149
Fnu4HI GCNGC 5 cut(s) 247, 294, 525, 963, 1261
FokI GGATG 5 cut(s) 778, 870, 1376, 1569, 1694
Fsp4HI GCNGC 5 cut(s) 247, 294, 525, 963, 1261
GluI GCNGC 5 cut(s) 247, 294, 525, 963, 1261
GsuI CTGGAG 2 cut(s) 804, 1461
HaeIII GGCC 4 cut(s) 234, 296, 854, 1753
HapII CCGG 2 cut(s) 180, 855
HgaI GACGC 4 cut(s) 275, 448, 1266, 1748
Hin1II CATG 8 cut(s) 83, 361, 421, 496, 994, 1307, 1474, 1762
HindIII AAGCTT 2 cut(s) 1127, 1151
HpaII CCGG 2 cut(s) 180, 855
HphI GGTGA 5 cut(s) 97, 263, 396, 729, 1010
Hpy166II GTNNAC 9 cut(s) 150, 229, 286, 288, 564, 576, 591, 721, 1091
Hpy188I TCNGA 6 cut(s) 217, 584, 1390, 1516, 1532, 1799
Hpy8I GTNNAC 9 cut(s) 150, 229, 286, 288, 564, 576, 591, 721, 1091
Hpy99I CGWCG 4 cut(s) 326, 353, 442, 1768
HpyAV CCTTC 5 cut(s) 26, 736, 995, 1631, 1834
HpyCH4III ACNGT 6 cut(s) 100, 226, 559, 588, 766, 925
HpyCH4IV ACGT 2 cut(s) 255, 769
HpyCH4V TGCA 7 cut(s) 273, 357, 539, 591, 618, 937, 1263
HpyF10VI GCNNNNNNNGC 5 cut(s) 279, 363, 601, 758, 824
HpyF3I CTNAG 3 cut(s) 214, 1610, 1812
HpySE526I ACGT 2 cut(s) 255, 769
Hsp92II CATG 8 cut(s) 83, 361, 421, 496, 994, 1307, 1474, 1762
Ksp22I TGATCA 2 cut(s) 1423, 1849
KspI CCGCGG 3 cut(s) 250, 294, 396
Kzo9I GATC 7 cut(s) 210, 598, 1423, 1548, 1660, 1838, 1849
LmnI GCTCC 3 cut(s) 635, 823, 1480
Lsp1109I GCAGC 2 cut(s) 949, 1247
LweI GCATC 1 cut(s) 1354
MabI ACCWGGT 1 cut(s) 474
MaeII ACGT 2 cut(s) 255, 769
MaeIII GTNAC 3 cut(s) 173, 251, 1466
MalI GATC 7 cut(s) 212, 600, 1425, 1550, 1662, 1840, 1851
MboI GATC 7 cut(s) 210, 598, 1423, 1548, 1660, 1838, 1849
MfeI CAATTG 1 cut(s) 140
MflI RGATCY 5 cut(s) 210, 598, 1548, 1660, 1838
MhlI GDGCHC 2 cut(s) 593, 1209
MluCI AATT 7 cut(s) 140, 613, 872, 938, 951, 1383, 1449
MlyI GAGTC 3 cut(s) 285, 395, 1597
MmeI TCCRAC 3 cut(s) 427, 1341, 1629
MseI TTAA 4 cut(s) 471, 875, 1101, 1781
MspA1I CMGCKG 4 cut(s) 249, 293, 395, 527
MspI CCGG 2 cut(s) 180, 855
MspR9I CCNGG 1 cut(s) 476
MunI CAATTG 1 cut(s) 140
Mva1269I GAATGC 2 cut(s) 439, 810
MvaI CCWGG 1 cut(s) 476
MvnI CGCG 4 cut(s) 135, 249, 293, 395
MwoI GCNNNNNNNGC 5 cut(s) 279, 363, 601, 758, 824
NdeI CATATG 1 cut(s) 341
NdeII GATC 7 cut(s) 210, 598, 1423, 1548, 1660, 1838, 1849
NheI GCTAGC 1 cut(s) 1346
NlaIII CATG 8 cut(s) 83, 361, 421, 496, 994, 1307, 1474, 1762
NlaIV GGNNCC 3 cut(s) 637, 1476, 1662
NmeAIII GCCGAG 1 cut(s) 24
NmuCI GTSAC 2 cut(s) 173, 251
NruI TCGCGA 1 cut(s) 135
NspI RCATGY 1 cut(s) 994
PaeR7I CTCGAG 1 cut(s) 1284
PagI TCATGA 2 cut(s) 417, 1303
PciI ACATGT 1 cut(s) 990
PctI GAATGC 2 cut(s) 439, 810
PfeI GAWTC 7 cut(s) 551, 929, 1141, 1278, 1290, 1310, 1375
PinAI ACCGGT 1 cut(s) 179
PkrI GCNGC 5 cut(s) 248, 295, 526, 964, 1262
PleI GAGTC 3 cut(s) 284, 395, 1597
PpsI GAGTC 3 cut(s) 284, 395, 1597
Ppu21I YACGTR 1 cut(s) 770
PscI ACATGT 1 cut(s) 990
Psp6I CCWGG 1 cut(s) 474
PspGI CCWGG 1 cut(s) 474
PspN4I GGNNCC 3 cut(s) 637, 1476, 1662
PspPI GGNCC 1 cut(s) 13
PspXI VCTCGAGB 1 cut(s) 1284
PstNI CAGNNNCTG 2 cut(s) 279, 601
PsuI RGATCY 5 cut(s) 210, 598, 1548, 1660, 1838
RruI TCGCGA 1 cut(s) 135
RsaI GTAC 8 cut(s) 287, 347, 363, 575, 713, 722, 768, 1092
RsaNI GTAC 8 cut(s) 286, 346, 362, 574, 712, 721, 767, 1091
SacII CCGCGG 3 cut(s) 250, 294, 396
SaqAI TTAA 4 cut(s) 471, 875, 1101, 1781
SatI GCNGC 5 cut(s) 247, 294, 525, 963, 1261
Sau3AI GATC 7 cut(s) 210, 598, 1423, 1548, 1660, 1838, 1849
Sau96I GGNCC 1 cut(s) 13
SchI GAGTC 3 cut(s) 285, 395, 1597
ScrFI CCNGG 1 cut(s) 476
SduI GDGCHC 2 cut(s) 593, 1209
SexAI ACCWGGT 1 cut(s) 474
SfaNI GCATC 1 cut(s) 1354
SfcI CTRYAG 2 cut(s) 555, 661
Sfr274I CTCGAG 1 cut(s) 1284
Sfr303I CCGCGG 3 cut(s) 250, 294, 396
SgrBI CCGCGG 3 cut(s) 250, 294, 396
SinI GGWCC 1 cut(s) 13
SlaI CTCGAG 1 cut(s) 1284
SmlI CTYRAG 4 cut(s) 509, 1284, 1544, 1699
SmoI CTYRAG 4 cut(s) 509, 1284, 1544, 1699
SnaBI TACGTA 1 cut(s) 770
Sse9I AATT 7 cut(s) 140, 613, 872, 938, 951, 1383, 1449
SspI AATATT 2 cut(s) 706, 1676
StyD4I CCNGG 1 cut(s) 474
StyI CCWWGG 1 cut(s) 407
TaaI ACNGT 6 cut(s) 100, 226, 559, 588, 766, 925
TaiI ACGT 2 cut(s) 258, 772
TaqI TCGA 6 cut(s) 159, 324, 957, 1253, 1285, 1321
TasI AATT 7 cut(s) 140, 613, 872, 938, 951, 1383, 1449
TatI WGTACW 2 cut(s) 285, 573
TauI GCSGC 3 cut(s) 249, 296, 527
TfiI GAWTC 7 cut(s) 551, 929, 1141, 1278, 1290, 1310, 1375
Tru1I TTAA 4 cut(s) 471, 875, 1101, 1781
Tru9I TTAA 4 cut(s) 471, 875, 1101, 1781
TscAI CASTG 7 cut(s) 202, 231, 564, 593, 625, 762, 1859
TseFI GTSAC 2 cut(s) 173, 251
TseI GCWGC 2 cut(s) 962, 1260
Tsp45I GTSAC 2 cut(s) 173, 251
TspRI CASTG 7 cut(s) 202, 231, 564, 593, 625, 762, 1859
VneI GTGCAC 1 cut(s) 589
VpaK11BI GGWCC 1 cut(s) 13
XapI RAATTY 1 cut(s) 1383
XceI RCATGY 1 cut(s) 994
XcmI CCANNNNNNNNNTGG 1 cut(s) 197
XhoI CTCGAG 1 cut(s) 1284
XmiI GTMKAC 1 cut(s) 149
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.