Prupe.1G090500_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000592
Physical Location & Seq
Reverse (-)
6816430 .. 6817266
837 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G090500.1

Sequence Viewer

Length: 837 bp
ATGGACGACCTACCTGAAGGAATAGTAGGAAAGTTAGAGTCACCCTTAGCAACCCTATTATACAAAATGGGACAAAAGCTGCCTAAAGCGACCGCTGTTGCAATAAACTCTTTTGAAGAAGTAGACCCTGAAGTTGTGAATGTGCTCAAGTCAAGATTCCAGAAGTTCCTCAACGTTGGACCCTTTAGTCTAATACCGTCATCACCATCACCATCACCATCACCGCCGCCATTGCTTAACGATGAAGGTGGTTGCTTAGAGTGGTTGGACACGCAGAAGCCAGCATCAGTGGCATATATTAGCTTTGGAAGTGTGGTGACACCACCACCTCATGAGCTAGCAGCATTTGCGGAAGCATTGATTGAAGGTGGGTTTCCATTTATTTGGTCATTTAGGGGCAACATAGAGGAAATATTGCCCAAGGGGTATGACAAAATGAGCCTGAATGGGAAAATACTTTCATGGGCTCCACAAGTGCAAGTCTTGGGGCATTCTTCAACTGGGGTTTTTGTGACACATTGTGGGTGGAATTCGATTTTGGAGAGCATTGTTGGTGGTGTGCCTATGATTTGCAGGCCATTTTTTGGAGACCAAAATCTTAACATGAGGACGGTAGAGGCTGCATGGGGGATTGGTGTTGAGGTTGAGGGAGGGCTCATCACGAAACCTGCAGCGATTAAGGCCTTGGAACTGGTCTTGAAGCAAAAAGAAGGAGAAGAAATTAGAGAAAAATTAAAGATCCTACAAAATCTTGCCCAACAAGCTGTTGAATGGAATGGTAGCTCCCCACGAGCTTTCAATAGCTTGGTCGAGATTGTCACCCATGGGCGGAACTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00942 ko01100 ko01110 map00942 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

279

Amino Acids

30.17

Weight (kDa)

5.24

Isoelectric Point (pI)

49.07

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000592)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04190 FvH4_2g02610 FvH4_3g13000 FvH4_4g03650 FvH4_4g03660 FvH4_4g09980
malus_domestica MD00G1134400.v1.1 MD16G1266400.v1.1 MD16G1266500.v1.1
prunus_persica Prupe.1G090400_v2.0.a1 Prupe.1G090500_v2.0.a1 Prupe.1G091000_v2.0.a1 Prupe.1G091100_v2.0.a1 Prupe.1G091100_v2.0.a1 Prupe.1G091200_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0393031 RchiOBHm_Chr4g0393051 RchiOBHm_Chr4g0393101 RchiOBHm_Chr4g0393121 RchiOBHm_Chr4g0393161 RchiOBHm_Chr4g0393201 RchiOBHm_Chr4g0393261 RchiOBHm_Chr4g0393271 RchiOBHm_Chr4g0403471
rosa_laevigata RLG00000002145 RLG00000008974 RLG00000009768 RLG00000009772
rosa_multiflora Rmu_co8079702.1_g000001 Rmu_co8169716.1_g000001 Rmu_co8283697.1_g000001 Rmu_co8424409.1_g000001 Rmu_co8489763.1_g000001 Rmu_co8489763.1_g000002 Rmu_sc0001590.1_g000014 Rmu_sc0004325.1_g000016 Rmu_sc0004828.1_g000004 Rmu_sc0004828.1_g000005 Rmu_sc0004828.1_g000007 Rmu_sc0007727.1_g000018 Rmu_sc0008186.1_g000005 Rmu_sc0008339.1_g000004 Rmu_sc0008339.1_g000008 Rmu_sc0009057.1_g000008 Rmu_sc0017178.1_g000006
rosa_roxburghii Rroxscaffold_5G00338130 Rroxscaffold_5G00338210 Rroxscaffold_5G00348140
rosa_rugosa Rorug04G0002000 Rorug04G0002100 Rorug04G0002100 Rorug04G0002200 Rorug04G0002300 Rorug04G0002400 Rorug04G0002500 Rorug04G0002600 Rorug04G0043500
rosa_samantha Rh4AG045600 Rh4AG045700 Rh4AG046000 Rh4AG046100 Rh4AG046200 Rh4AG046300 Rh4AG119100 Rh4BG041500 Rh4BG041700 Rh4BG041900 Rh4BG042000 Rh4BG112000 Rh4DG043000 Rh4DG043400 Rh4DG043500 Rh4DG043600 Rh4DG043700 Rh4DG111700 Rh7DG343500
rosa_wichuraiana Rw4G003590 Rw4G003620 Rw4G003660 Rw4G009660 Rw7G029290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AasI GACNNNNNNGTC 1 cut(s) 186
Acc36I ACCTGC 1 cut(s) 676
AccB7I CCANNNNNTGG 1 cut(s) 584
AccI GTMKAC 1 cut(s) 123
AciI CCGC 5 cut(s) 93, 224, 227, 350, 829
AclI AACGTT 1 cut(s) 174
AclWI GGATC 1 cut(s) 733
AcsI RAATTY 1 cut(s) 529
AcuI CTGAAG 2 cut(s) 36, 150
AdeI CACNNNGTG 1 cut(s) 521
AfiI CCNNNNNNNGG 2 cut(s) 584, 828
AgsI TTSAA 6 cut(s) 116, 365, 498, 700, 770, 799
AjuI GAANNNNNNNTTGG 2 cut(s) 521, 553
AluBI AGCT 7 cut(s) 79, 303, 337, 764, 783, 794, 804
AluI AGCT 7 cut(s) 79, 303, 337, 764, 783, 794, 804
Alw21I GWGCWC 1 cut(s) 147
Alw26I GTCTC 1 cut(s) 582
AlwI GGATC 1 cut(s) 733
AoxI GGCC 2 cut(s) 575, 681
ApeKI GCWGC 4 cut(s) 79, 341, 620, 671
ApoI RAATTY 1 cut(s) 529
AspS9I GGNCC 1 cut(s) 179
AsuHPI GGTGA 7 cut(s) 33, 195, 201, 207, 213, 328, 811
AsuNHI GCTAGC 1 cut(s) 337
AvaII GGWCC 1 cut(s) 179
BanII GRGCYC 2 cut(s) 469, 657
BauI CACGAG 1 cut(s) 789
Bbv12I GWGCWC 1 cut(s) 147
BbvI GCAGC 4 cut(s) 66, 353, 607, 683
BccI CCATC 3 cut(s) 214, 220, 226
BcoDI GTCTC 1 cut(s) 582
BfaI CTAG 2 cut(s) 338, 835
BfmI CTRYAG 1 cut(s) 669
BfuAI ACCTGC 1 cut(s) 676
BisI GCNGC 5 cut(s) 80, 227, 342, 621, 672
BlsI GCNGC 5 cut(s) 81, 228, 343, 622, 673
Bme18I GGWCC 1 cut(s) 179
BmgT120I GGNCC 1 cut(s) 179
BmiI GGNNCC 2 cut(s) 181, 468
BmrI ACTGGG 1 cut(s) 510
BmsI GCATC 1 cut(s) 293
BmtI GCTAGC 1 cut(s) 341
BmuI ACTGGG 1 cut(s) 510
Bpu10I CCTNAGC 1 cut(s) 46
BpuEI CTTGAG 1 cut(s) 131
BsaI GGTCTC 1 cut(s) 582
BsaJI CCNNGG 3 cut(s) 420, 684, 823
Bsc4I CCNNNNNNNGG 2 cut(s) 584, 828
Bse1I ACTGG 2 cut(s) 505, 696
Bse3DI GCAATG 1 cut(s) 230
BseDI CCNNGG 3 cut(s) 420, 684, 823
BseLI CCNNNNNNNGG 2 cut(s) 584, 828
BseMI GCAATG 1 cut(s) 230
BseNI ACTGG 2 cut(s) 505, 696
BseXI GCAGC 4 cut(s) 66, 353, 607, 683
Bsh1285I CGRYCG 1 cut(s) 93
BshFI GGCC 2 cut(s) 577, 683
BsiEI CGRYCG 1 cut(s) 93
BsiHKAI GWGCWC 1 cut(s) 147
BslFI GGGAC 1 cut(s) 84
BslI CCNNNNNNNGG 2 cut(s) 584, 828
BsmAI GTCTC 1 cut(s) 582
BsmFI GGGAC 1 cut(s) 84
BsmI GAATGC 1 cut(s) 490
BsnI GGCC 2 cut(s) 577, 683
Bso31I GGTCTC 1 cut(s) 582
Bsp1286I GDGCHC 3 cut(s) 147, 469, 657
Bsp143I GATC 1 cut(s) 738
Bsp19I CCATGG 1 cut(s) 823
BspACI CCGC 5 cut(s) 93, 224, 227, 350, 829
BspANI GGCC 2 cut(s) 577, 683
BspHI TCATGA 1 cut(s) 331
BspLI GGNNCC 2 cut(s) 181, 468
BspMAI CTGCAG 1 cut(s) 673
BspMI ACCTGC 1 cut(s) 676
BspOI GCTAGC 1 cut(s) 341
BspPI GGATC 1 cut(s) 733
BspTNI GGTCTC 1 cut(s) 582
BsrDI GCAATG 1 cut(s) 230
BsrI ACTGG 2 cut(s) 505, 696
BssECI CCNNGG 3 cut(s) 420, 684, 823
BssMI GATC 1 cut(s) 738
BssSI CACGAG 1 cut(s) 789
BssT1I CCWWGG 3 cut(s) 420, 684, 823
Bst2BI CACGAG 1 cut(s) 789
Bst4CI ACNGT 2 cut(s) 198, 613
BstAPI GCANNNNNTGC 1 cut(s) 347
BstC8I GCNNGC 3 cut(s) 282, 339, 575
BstDEI CTNAG 2 cut(s) 46, 256
BstDSI CCRYGG 1 cut(s) 823
BstKTI GATC 1 cut(s) 741
BstMAI GTCTC 1 cut(s) 582
BstMBI GATC 1 cut(s) 738
BstMCI CGRYCG 1 cut(s) 93
BstMWI GCNNNNNNNGC 5 cut(s) 232, 290, 347, 680, 761
BstSFI CTRYAG 1 cut(s) 669
BstV1I GCAGC 4 cut(s) 66, 353, 607, 683
BstX2I RGATCY 1 cut(s) 738
BstXI CCANNNNNNTGG 1 cut(s) 384
BstYI RGATCY 1 cut(s) 738
BsuRI GGCC 2 cut(s) 577, 683
BtgI CCRYGG 1 cut(s) 823
BtsIMutI CAGTG 1 cut(s) 294
BveI ACCTGC 1 cut(s) 676
Cac8I GCNNGC 3 cut(s) 282, 339, 575
CciI TCATGA 1 cut(s) 331
Cfr13I GGNCC 1 cut(s) 179
CviAII CATG 5 cut(s) 332, 462, 604, 624, 824
DdeI CTNAG 2 cut(s) 46, 256
DpnI GATC 1 cut(s) 740
DpnII GATC 1 cut(s) 738
DraIII CACNNNGTG 1 cut(s) 521
DrdI GACNNNNNNGTC 1 cut(s) 186
DseDI GACNNNNNNGTC 1 cut(s) 186
Eco130I CCWWGG 3 cut(s) 420, 684, 823
Eco147I AGGCCT 1 cut(s) 683
Eco24I GRGCYC 2 cut(s) 469, 657
Eco31I GGTCTC 1 cut(s) 582
Eco47I GGWCC 1 cut(s) 179
Eco57I CTGAAG 2 cut(s) 36, 150
EcoRI GAATTC 1 cut(s) 529
EcoT14I CCWWGG 3 cut(s) 420, 684, 823
EcoT38I GRGCYC 2 cut(s) 469, 657
ErhI CCWWGG 3 cut(s) 420, 684, 823
FaeI CATG 5 cut(s) 335, 465, 607, 627, 827
FaqI GGGAC 1 cut(s) 84
FatI CATG 5 cut(s) 331, 461, 603, 623, 823
FblI GTMKAC 1 cut(s) 123
Fnu4HI GCNGC 5 cut(s) 80, 227, 342, 621, 672
FriOI GRGCYC 2 cut(s) 469, 657
Fsp4HI GCNGC 5 cut(s) 80, 227, 342, 621, 672
FspBI CTAG 2 cut(s) 338, 835
GluI GCNGC 5 cut(s) 80, 227, 342, 621, 672
HaeIII GGCC 2 cut(s) 577, 683
Hin1II CATG 5 cut(s) 335, 465, 607, 627, 827
HinfI GANTC 2 cut(s) 38, 156
HphI GGTGA 7 cut(s) 33, 195, 201, 207, 213, 328, 811
Hpy166II GTNNAC 1 cut(s) 124
Hpy188III TCNNGA 6 cut(s) 153, 160, 332, 661, 697, 811
Hpy8I GTNNAC 1 cut(s) 124
HpyAV CCTTC 4 cut(s) 11, 239, 359, 704
HpyCH4III ACNGT 2 cut(s) 198, 613
HpyCH4IV ACGT 1 cut(s) 174
HpyCH4V TGCA 5 cut(s) 101, 478, 573, 623, 671
HpyF10VI GCNNNNNNNGC 5 cut(s) 232, 290, 347, 680, 761
HpyF3I CTNAG 2 cut(s) 46, 256
HpySE526I ACGT 1 cut(s) 174
Hsp92II CATG 5 cut(s) 335, 465, 607, 627, 827
Kzo9I GATC 1 cut(s) 738
LmnI GCTCC 2 cut(s) 472, 788
LpnPI CCDG 9 cut(s) 27, 141, 173, 294, 455, 486, 559, 677, 681
Lsp1109I GCAGC 4 cut(s) 66, 353, 607, 683
LweI GCATC 1 cut(s) 293
MaeI CTAG 2 cut(s) 338, 835
MaeII ACGT 1 cut(s) 174
MaeIII GTNAC 4 cut(s) 39, 316, 511, 817
MalI GATC 1 cut(s) 740
MboI GATC 1 cut(s) 738
MboII GAAGA 3 cut(s) 128, 486, 728
MflI RGATCY 1 cut(s) 738
MhlI GDGCHC 3 cut(s) 147, 469, 657
MluCI AATT 3 cut(s) 529, 720, 731
MlyI GAGTC 1 cut(s) 47
MmeI TCCRAC 2 cut(s) 157, 246
MnlI CCTC 8 cut(s) 179, 339, 400, 600, 610, 634, 640, 644
MseI TTAA 4 cut(s) 237, 600, 678, 734
MspA1I CMGCKG 1 cut(s) 95
Mva1269I GAATGC 1 cut(s) 490
MwoI GCNNNNNNNGC 5 cut(s) 232, 290, 347, 680, 761
NcoI CCATGG 1 cut(s) 823
NdeII GATC 1 cut(s) 738
NheI GCTAGC 1 cut(s) 337
NlaIII CATG 5 cut(s) 335, 465, 607, 627, 827
NlaIV GGNNCC 2 cut(s) 181, 468
NmuCI GTSAC 4 cut(s) 39, 316, 511, 817
PagI TCATGA 1 cut(s) 331
PceI AGGCCT 1 cut(s) 683
PctI GAATGC 1 cut(s) 490
PfeI GAWTC 1 cut(s) 156
PflMI CCANNNNNTGG 1 cut(s) 584
PkrI GCNGC 5 cut(s) 81, 228, 343, 622, 673
PleI GAGTC 1 cut(s) 46
PpsI GAGTC 1 cut(s) 46
Psp1406I AACGTT 1 cut(s) 174
PspN4I GGNNCC 2 cut(s) 181, 468
PspPI GGNCC 1 cut(s) 179
PstI CTGCAG 1 cut(s) 673
PsuI RGATCY 1 cut(s) 738
SaqAI TTAA 4 cut(s) 237, 600, 678, 734
SatI GCNGC 5 cut(s) 80, 227, 342, 621, 672
Sau3AI GATC 1 cut(s) 738
Sau96I GGNCC 1 cut(s) 179
SchI GAGTC 1 cut(s) 47
SduI GDGCHC 3 cut(s) 147, 469, 657
SfaNI GCATC 1 cut(s) 293
SfcI CTRYAG 1 cut(s) 669
SinI GGWCC 1 cut(s) 179
SmlI CTYRAG 1 cut(s) 146
SmoI CTYRAG 1 cut(s) 146
Sse9I AATT 3 cut(s) 529, 720, 731
SseBI AGGCCT 1 cut(s) 683
SsiI CCGC 5 cut(s) 93, 224, 227, 350, 829
SspI AATATT 1 cut(s) 414
SspMI CTAG 2 cut(s) 338, 835
StuI AGGCCT 1 cut(s) 683
StyI CCWWGG 3 cut(s) 420, 684, 823
TaaI ACNGT 2 cut(s) 198, 613
TaiI ACGT 1 cut(s) 177
TaqI TCGA 2 cut(s) 533, 810
TasI AATT 3 cut(s) 529, 720, 731
TauI GCSGC 1 cut(s) 229
TfiI GAWTC 1 cut(s) 156
Tru1I TTAA 4 cut(s) 237, 600, 678, 734
Tru9I TTAA 4 cut(s) 237, 600, 678, 734
TscAI CASTG 1 cut(s) 294
TseFI GTSAC 4 cut(s) 39, 316, 511, 817
TseI GCWGC 4 cut(s) 79, 341, 620, 671
Tsp45I GTSAC 4 cut(s) 39, 316, 511, 817
TspDTI ATGAA 2 cut(s) 258, 450
TspRI CASTG 1 cut(s) 294
Van91I CCANNNNNTGG 1 cut(s) 584
VpaK11BI GGWCC 1 cut(s) 179
XapI RAATTY 1 cut(s) 529
XmiI GTMKAC 1 cut(s) 123
XspI CTAG 2 cut(s) 338, 835
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.