Belongs to the UDP-glycosyltransferase family
| Domain Name | Pfam ID | Position | E-value | Description |
|---|---|---|---|---|
| UBA_RAD5A | PF24559 | 249 - 289 | 3.4e-12 | DNA repair protein RAD5A UBA domain |
| HIRAN | PF08797 | 348 - 437 | 2.3e-13 | HIRAN domain |
| SNF2-rel_dom | PF00176 | 567 - 927 | 6.4e-73 | SNF2-related domain |
| DEAD | PF00270 | 635 - 800 | 1.5e-06 | DEAD/DEAH box helicase |
| zf-C3HC4_3 | PF13920 | 988 - 1036 | 1.5e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_2 | PF13639 | 990 - 1031 | 5.1e-06 | Ring finger domain |
| zf-C3HC4_2 | PF13923 | 990 - 1030 | 6.8e-06 | Zinc finger, C3HC4 type (RING finger) |
| zf-C3HC4 | PF00097 | 991 - 1030 | 4.2e-08 | Zinc finger, C3HC4 type (RING finger) |
| zf-RING_UBOX | PF13445 | 991 - 1028 | 8.8e-08 | RING-type zinc-finger |
| zf-C3HC4_4 | PF15227 | 991 - 1030 | 5.1e-07 | zinc finger of C3HC4-type, RING |
| Helicase_C | PF00271 | 1066 - 1175 | 3.4e-23 | Helicase conserved C-terminal domain |
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| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| AccB7I | CCANNNNNTGG | 1 cut(s) | 3071 |
| AccBSI | CCGCTC | 2 cut(s) | 1021, 1332 |
| AccI | GTMKAC | 1 cut(s) | 1089 |
| AccIII | TCCGGA | 1 cut(s) | 475 |
| AcoI | YGGCCR | 3 cut(s) | 99, 119, 724 |
| AcuI | CTGAAG | 1 cut(s) | 548 |
| AdeI | CACNNNGTG | 1 cut(s) | 3017 |
| AfaI | GTAC | 3 cut(s) | 375, 1230, 2181 |
| AfeI | AGCGCT | 1 cut(s) | 1713 |
| AfiI | CCNNNNNNNGG | 8 cut(s) | 84, 616, 1077, 2042, 2086, 2664, 3071, 3145 |
| AleI | CACNNNNGTG | 2 cut(s) | 1346, 2142 |
| Alw21I | GWGCWC | 6 cut(s) | 245, 817, 2326, 3022, 3628, 3669 |
| Alw26I | GTCTC | 5 cut(s) | 163, 245, 828, 2521, 3371 |
| AlwNI | CAGNNNCTG | 3 cut(s) | 2636, 3230, 3542 |
| Ama87I | CYCGRG | 3 cut(s) | 578, 779, 3049 |
| Aor13HI | TCCGGA | 1 cut(s) | 475 |
| Aor51HI | AGCGCT | 1 cut(s) | 1713 |
| ApeKI | GCWGC | 6 cut(s) | 845, 1268, 1787, 2216, 2219, 3443 |
| ArsI | GACNNNNNNTTYG | 2 cut(s) | 3253, 3285 |
| AseI | ATTAAT | 1 cut(s) | 2465 |
| Asp700I | GAANNNNTTC | 5 cut(s) | 150, 561, 1509, 1558, 3368 |
| AspLEI | GCGC | 4 cut(s) | 69, 271, 343, 1714 |
| AspS9I | GGNCC | 3 cut(s) | 2313, 2577, 3074 |
| AsuC2I | CCSGG | 1 cut(s) | 85 |
| AsuHPI | GGTGA | 9 cut(s) | 433, 532, 946, 1319, 1333, 2329, 2501, 2834, 2969 |
| AsuII | TTCGAA | 1 cut(s) | 3179 |
| AsuNHI | GCTAGC | 1 cut(s) | 2876 |
| AvaI | CYCGRG | 3 cut(s) | 578, 779, 3049 |
| AvaII | GGWCC | 2 cut(s) | 2313, 3074 |
| BamHI | GGATCC | 1 cut(s) | 3466 |
| BanII | GRGCYC | 6 cut(s) | 91, 144, 1668, 2115, 3628, 3669 |
| BauI | CACGAG | 1 cut(s) | 3069 |
| BbsI | GAAGAC | 7 cut(s) | 1350, 1484, 1602, 1928, 3035, 3067, 3448 |
| Bbv12I | GWGCWC | 6 cut(s) | 245, 817, 2326, 3022, 3628, 3669 |
| BbvCI | CCTCAGC | 1 cut(s) | 264 |
| BbvI | GCAGC | 6 cut(s) | 857, 1255, 1799, 2203, 2231, 3455 |
| BceAI | ACGGC | 2 cut(s) | 86, 833 |
| BciVI | GTATCC | 1 cut(s) | 2957 |
| BclI | TGATCA | 2 cut(s) | 105, 738 |
| BcnI | CCSGG | 1 cut(s) | 85 |
| BcoDI | GTCTC | 5 cut(s) | 163, 245, 828, 2521, 3371 |
| BfaI | CTAG | 5 cut(s) | 1370, 1898, 2160, 2877, 3654 |
| BfmI | CTRYAG | 3 cut(s) | 2217, 2404, 3441 |
| BfoI | RGCGCY | 2 cut(s) | 272, 1715 |
| BfuI | GTATCC | 1 cut(s) | 2957 |
| BglII | AGATCT | 1 cut(s) | 2398 |
| BisI | GCNGC | 9 cut(s) | 287, 846, 1269, 1635, 1788, 2217, 2220, 3139, 3444 |
| BlpI | GCTNAGC | 1 cut(s) | 290 |
| BlsI | GCNGC | 9 cut(s) | 288, 847, 1270, 1636, 1789, 2218, 2221, 3140, 3445 |
| Bme18I | GGWCC | 2 cut(s) | 2313, 3074 |
| BmeT110I | CYCGRG | 3 cut(s) | 578, 779, 3049 |
| BmgT120I | GGNCC | 3 cut(s) | 2313, 2577, 3074 |
| BmiI | GGNNCC | 8 cut(s) | 213, 318, 474, 621, 1561, 1665, 2315, 3468 |
| BmrI | ACTGGG | 1 cut(s) | 2455 |
| BmsI | GCATC | 7 cut(s) | 273, 1281, 1363, 1894, 2623, 2875, 3455 |
| BmtI | GCTAGC | 1 cut(s) | 2880 |
| BmuI | ACTGGG | 1 cut(s) | 2455 |
| BpiI | GAAGAC | 7 cut(s) | 1350, 1484, 1602, 1928, 3035, 3067, 3448 |
| BpmI | CTGGAG | 2 cut(s) | 1197, 1449 |
| Bpu10I | CCTNAGC | 2 cut(s) | 264, 2325 |
| Bpu1102I | GCTNAGC | 1 cut(s) | 290 |
| Bpu14I | TTCGAA | 1 cut(s) | 3179 |
| BpuEI | CTTGAG | 1 cut(s) | 2756 |
| BpuMI | CCSGG | 1 cut(s) | 85 |
| Bsa29I | ATCGAT | 2 cut(s) | 281, 1389 |
| BsaBI | GATNNNNATC | 1 cut(s) | 227 |
| BsaI | GGTCTC | 4 cut(s) | 245, 828, 2521, 3371 |
| BsaWI | WCCGGW | 1 cut(s) | 475 |
| BsaXI | ACNNNNNCTCC | 8 cut(s) | 1032, 1062, 1698, 1728, 2359, 2389, 2574, 2604 |
| Bsc4I | CCNNNNNNNGG | 8 cut(s) | 84, 616, 1077, 2042, 2086, 2664, 3071, 3145 |
| Bse1I | ACTGG | 8 cut(s) | 605, 2080, 2270, 2374, 2450, 2680, 2689, 3421 |
| Bse3DI | GCAATG | 2 cut(s) | 1532, 2350 |
| Bse8I | GATNNNNATC | 1 cut(s) | 227 |
| BseAI | TCCGGA | 1 cut(s) | 475 |
| BseCI | ATCGAT | 2 cut(s) | 281, 1389 |
| BseJI | GATNNNNATC | 1 cut(s) | 227 |
| BseLI | CCNNNNNNNGG | 8 cut(s) | 84, 616, 1077, 2042, 2086, 2664, 3071, 3145 |
| BseMI | GCAATG | 2 cut(s) | 1532, 2350 |
| BseMII | CTCAG | 8 cut(s) | 255, 381, 429, 1446, 1596, 1693, 2339, 2495 |
| BseNI | ACTGG | 8 cut(s) | 605, 2080, 2270, 2374, 2450, 2680, 2689, 3421 |
| BseX3I | CGGCCG | 1 cut(s) | 99 |
| BseXI | GCAGC | 6 cut(s) | 857, 1255, 1799, 2203, 2231, 3455 |
| BseYI | CCCAGC | 3 cut(s) | 1782, 2912, 3054 |
| BsgI | GTGCAG | 3 cut(s) | 1041, 1254, 1524 |
| Bsh1285I | CGRYCG | 3 cut(s) | 102, 773, 1189 |
| BshVI | ATCGAT | 2 cut(s) | 281, 1389 |
| BsiEI | CGRYCG | 3 cut(s) | 102, 773, 1189 |
| BsiHKAI | GWGCWC | 6 cut(s) | 245, 817, 2326, 3022, 3628, 3669 |
| BsiHKCI | CYCGRG | 3 cut(s) | 578, 779, 3049 |
| BsiSI | CCGG | 4 cut(s) | 84, 122, 476, 3621 |
| BslFI | GGGAC | 6 cut(s) | 932, 1057, 1926, 2046, 2894, 2958 |
| BslI | CCNNNNNNNGG | 8 cut(s) | 84, 616, 1077, 2042, 2086, 2664, 3071, 3145 |
| BsmAI | GTCTC | 5 cut(s) | 163, 245, 828, 2521, 3371 |
| BsmBI | CGTCTC | 1 cut(s) | 163 |
| BsmFI | GGGAC | 6 cut(s) | 932, 1057, 1926, 2046, 2894, 2958 |
| BsmI | GAATGC | 2 cut(s) | 830, 847 |
| Bso31I | GGTCTC | 4 cut(s) | 245, 828, 2521, 3371 |
| BsoBI | CYCGRG | 3 cut(s) | 578, 779, 3049 |
| Bsp119I | TTCGAA | 1 cut(s) | 3179 |
| Bsp13I | TCCGGA | 1 cut(s) | 475 |
| Bsp1407I | TGTACA | 2 cut(s) | 1228, 2179 |
| Bsp1720I | GCTNAGC | 1 cut(s) | 290 |
| Bsp19I | CCATGG | 3 cut(s) | 27, 2435, 3470 |
| BspCNI | CTCAG | 8 cut(s) | 256, 382, 430, 1447, 1597, 1692, 2338, 2496 |
| BspDI | ATCGAT | 2 cut(s) | 281, 1389 |
| BspEI | TCCGGA | 1 cut(s) | 475 |
| BspHI | TCATGA | 2 cut(s) | 652, 2784 |
| BspLI | GGNNCC | 8 cut(s) | 213, 318, 474, 621, 1561, 1665, 2315, 3468 |
| BspMAI | CTGCAG | 2 cut(s) | 2221, 3445 |
| BspOI | GCTAGC | 1 cut(s) | 2880 |
| BspT104I | TTCGAA | 1 cut(s) | 3179 |
| BspTNI | GGTCTC | 4 cut(s) | 245, 828, 2521, 3371 |
| BsrBI | CCGCTC | 2 cut(s) | 1021, 1332 |
| BsrDI | GCAATG | 2 cut(s) | 1532, 2350 |
| BsrGI | TGTACA | 2 cut(s) | 1228, 2179 |
| BsrI | ACTGG | 8 cut(s) | 605, 2080, 2270, 2374, 2450, 2680, 2689, 3421 |
| BssSI | CACGAG | 1 cut(s) | 3069 |
| BssT1I | CCWWGG | 5 cut(s) | 27, 2166, 2317, 2435, 3470 |
| Bst2BI | CACGAG | 1 cut(s) | 3069 |
| Bst4CI | ACNGT | 9 cut(s) | 956, 1048, 1260, 1796, 1927, 2628, 3538, 3544, 3571 |
| Bst6I | CTCTTC | 9 cut(s) | 231, 419, 744, 1413, 1960, 1991, 2925, 3290, 3295 |
| BstAPI | GCANNNNNTGC | 1 cut(s) | 1538 |
| BstAUI | TGTACA | 2 cut(s) | 1228, 2179 |
| BstBI | TTCGAA | 1 cut(s) | 3179 |
| BstC8I | GCNNGC | 6 cut(s) | 1032, 1539, 2856, 2878, 3498, 3584 |
| BstDSI | CCRYGG | 3 cut(s) | 27, 2435, 3470 |
| BstH2I | RGCGCY | 2 cut(s) | 272, 1715 |
| BstHHI | GCGC | 4 cut(s) | 69, 271, 343, 1714 |
| BstMAI | GTCTC | 5 cut(s) | 163, 245, 828, 2521, 3371 |
| BstMCI | CGRYCG | 3 cut(s) | 102, 773, 1189 |
| BstMWI | GCNNNNNNNGC | 9 cut(s) | 118, 148, 982, 1027, 1529, 1538, 3240, 3340, 3673 |
| BstNSI | RCATGY | 1 cut(s) | 2429 |
| BstSFI | CTRYAG | 3 cut(s) | 2217, 2404, 3441 |
| BstV1I | GCAGC | 6 cut(s) | 857, 1255, 1799, 2203, 2231, 3455 |
| BstV2I | GAAGAC | 7 cut(s) | 1350, 1484, 1602, 1928, 3035, 3067, 3448 |
| BstX2I | RGATCY | 7 cut(s) | 386, 434, 533, 2398, 3274, 3285, 3466 |
| BstXI | CCANNNNNNTGG | 1 cut(s) | 2983 |
| BstYI | RGATCY | 7 cut(s) | 386, 434, 533, 2398, 3274, 3285, 3466 |
| BstZI | CGGCCG | 1 cut(s) | 99 |
| Bsu15I | ATCGAT | 2 cut(s) | 281, 1389 |
| BsuI | GTATCC | 1 cut(s) | 2957 |
| BsuTUI | ATCGAT | 2 cut(s) | 281, 1389 |
| BtgI | CCRYGG | 3 cut(s) | 27, 2435, 3470 |
| BtgZI | GCGATG | 3 cut(s) | 1922, 2331, 3500 |
| BtsI | GCAGTG | 1 cut(s) | 2765 |
| BtsIMutI | CAGTG | 6 cut(s) | 2087, 2531, 2765, 3263, 3540, 3630 |
| Cac8I | GCNNGC | 6 cut(s) | 1032, 1539, 2856, 2878, 3498, 3584 |
| CaiI | CAGNNNCTG | 3 cut(s) | 2636, 3230, 3542 |
| CciI | TCATGA | 2 cut(s) | 652, 2784 |
| CfoI | GCGC | 4 cut(s) | 69, 271, 343, 1714 |
| Cfr13I | GGNCC | 3 cut(s) | 2313, 2577, 3074 |
| ClaI | ATCGAT | 2 cut(s) | 281, 1389 |
| CsiI | ACCWGGT | 3 cut(s) | 406, 1142, 1957 |
| Csp6I | GTAC | 3 cut(s) | 374, 1229, 2180 |
| CspCI | CAANNNNNGTGG | 2 cut(s) | 975, 1010 |
| CviQI | GTAC | 3 cut(s) | 374, 1229, 2180 |
| DraIII | CACNNNGTG | 1 cut(s) | 3017 |
| EaeI | YGGCCR | 3 cut(s) | 99, 119, 724 |
| EagI | CGGCCG | 1 cut(s) | 99 |
| Eam1104I | CTCTTC | 9 cut(s) | 231, 419, 744, 1413, 1960, 1991, 2925, 3290, 3295 |
| EarI | CTCTTC | 9 cut(s) | 231, 419, 744, 1413, 1960, 1991, 2925, 3290, 3295 |
| EciI | GGCGGA | 1 cut(s) | 1652 |
| Ecl136II | GAGCTC | 2 cut(s) | 3626, 3667 |
| EclXI | CGGCCG | 1 cut(s) | 99 |
| Eco130I | CCWWGG | 5 cut(s) | 27, 2166, 2317, 2435, 3470 |
| Eco147I | AGGCCT | 1 cut(s) | 2476 |
| Eco24I | GRGCYC | 6 cut(s) | 91, 144, 1668, 2115, 3628, 3669 |
| Eco31I | GGTCTC | 4 cut(s) | 245, 828, 2521, 3371 |
| Eco32I | GATATC | 1 cut(s) | 1981 |
| Eco47I | GGWCC | 2 cut(s) | 2313, 3074 |
| Eco47III | AGCGCT | 1 cut(s) | 1713 |
| Eco52I | CGGCCG | 1 cut(s) | 99 |
| Eco53kI | GAGCTC | 2 cut(s) | 3626, 3667 |
| Eco57I | CTGAAG | 1 cut(s) | 548 |
| Eco88I | CYCGRG | 3 cut(s) | 578, 779, 3049 |
| EcoICRI | GAGCTC | 2 cut(s) | 3626, 3667 |
| EcoO109I | RGGNCCY | 1 cut(s) | 2313 |
| EcoRI | GAATTC | 3 cut(s) | 33, 1007, 3510 |
| EcoRV | GATATC | 1 cut(s) | 1981 |
| EcoT14I | CCWWGG | 5 cut(s) | 27, 2166, 2317, 2435, 3470 |
| EcoT38I | GRGCYC | 6 cut(s) | 91, 144, 1668, 2115, 3628, 3669 |
| ErhI | CCWWGG | 5 cut(s) | 27, 2166, 2317, 2435, 3470 |
| Esp3I | CGTCTC | 1 cut(s) | 163 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 489, 521 |
| FaqI | GGGAC | 6 cut(s) | 932, 1057, 1926, 2046, 2894, 2958 |
| FauI | CCCGC | 1 cut(s) | 1014 |
| FauNDI | CATATG | 2 cut(s) | 2203, 2978 |
| FbaI | TGATCA | 2 cut(s) | 105, 738 |
| FblI | GTMKAC | 1 cut(s) | 1089 |
| Fnu4HI | GCNGC | 9 cut(s) | 287, 846, 1269, 1635, 1788, 2217, 2220, 3139, 3444 |
| FriOI | GRGCYC | 6 cut(s) | 91, 144, 1668, 2115, 3628, 3669 |
| Fsp4HI | GCNGC | 9 cut(s) | 287, 846, 1269, 1635, 1788, 2217, 2220, 3139, 3444 |
| FspBI | CTAG | 5 cut(s) | 1370, 1898, 2160, 2877, 3654 |
| GlaI | GCGC | 4 cut(s) | 68, 270, 342, 1713 |
| GluI | GCNGC | 9 cut(s) | 287, 846, 1269, 1635, 1788, 2217, 2220, 3139, 3444 |
| GsaI | CCCAGC | 3 cut(s) | 1786, 2916, 3058 |
| GsuI | CTGGAG | 2 cut(s) | 1197, 1449 |
| HaeII | RGCGCY | 2 cut(s) | 272, 1715 |
| HapII | CCGG | 4 cut(s) | 84, 122, 476, 3621 |
| HhaI | GCGC | 4 cut(s) | 69, 271, 343, 1714 |
| Hin6I | GCGC | 4 cut(s) | 67, 269, 341, 1712 |
| HinP1I | GCGC | 4 cut(s) | 67, 269, 341, 1712 |
| HincII | GTYRAC | 4 cut(s) | 1105, 1831, 2263, 3402 |
| HindII | GTYRAC | 4 cut(s) | 1105, 1831, 2263, 3402 |
| HindIII | AAGCTT | 3 cut(s) | 149, 674, 2852 |
| HpaI | GTTAAC | 1 cut(s) | 1105 |
| HpaII | CCGG | 4 cut(s) | 84, 122, 476, 3621 |
| HphI | GGTGA | 9 cut(s) | 433, 532, 946, 1319, 1333, 2329, 2501, 2834, 2969 |
| Hpy99I | CGWCG | 4 cut(s) | 181, 184, 634, 919 |
| HpyCH4III | ACNGT | 9 cut(s) | 956, 1048, 1260, 1796, 1927, 2628, 3538, 3544, 3571 |
| HpyCH4IV | ACGT | 4 cut(s) | 632, 1489, 1507, 3453 |
| HpyF10VI | GCNNNNNNNGC | 9 cut(s) | 118, 148, 982, 1027, 1529, 1538, 3240, 3340, 3673 |
| HpySE526I | ACGT | 4 cut(s) | 632, 1489, 1507, 3453 |
| HspAI | GCGC | 4 cut(s) | 67, 269, 341, 1712 |
| Kpn2I | TCCGGA | 1 cut(s) | 475 |
| Ksp22I | TGATCA | 2 cut(s) | 105, 738 |
| KspAI | GTTAAC | 1 cut(s) | 1105 |
| Lsp1109I | GCAGC | 6 cut(s) | 857, 1255, 1799, 2203, 2231, 3455 |
| LweI | GCATC | 7 cut(s) | 273, 1281, 1363, 1894, 2623, 2875, 3455 |
| MabI | ACCWGGT | 3 cut(s) | 406, 1142, 1957 |
| MaeI | CTAG | 5 cut(s) | 1370, 1898, 2160, 2877, 3654 |
| MaeII | ACGT | 4 cut(s) | 632, 1489, 1507, 3453 |
| MaeIII | GTNAC | 2 cut(s) | 1051, 3538 |
| MbiI | CCGCTC | 2 cut(s) | 1021, 1332 |
| MfeI | CAATTG | 1 cut(s) | 1935 |
| MflI | RGATCY | 7 cut(s) | 386, 434, 533, 2398, 3274, 3285, 3466 |
| MlyI | GAGTC | 4 cut(s) | 140, 578, 1616, 2797 |
| MmeI | TCCRAC | 7 cut(s) | 364, 1018, 1462, 1889, 2621, 2771, 3071 |
| MroI | TCCGGA | 1 cut(s) | 475 |
| MroXI | GAANNNNTTC | 5 cut(s) | 150, 561, 1509, 1558, 3368 |
| MslI | CAYNNNNRTG | 4 cut(s) | 47, 1346, 2142, 2721 |
| MspI | CCGG | 4 cut(s) | 84, 122, 476, 3621 |
| MunI | CAATTG | 1 cut(s) | 1935 |
| Mva1269I | GAATGC | 2 cut(s) | 830, 847 |
| MwoI | GCNNNNNNNGC | 9 cut(s) | 118, 148, 982, 1027, 1529, 1538, 3240, 3340, 3673 |
| NciI | CCSGG | 1 cut(s) | 85 |
| NcoI | CCATGG | 3 cut(s) | 27, 2435, 3470 |
| NdeI | CATATG | 2 cut(s) | 2203, 2978 |
| NheI | GCTAGC | 1 cut(s) | 2876 |
| NlaIV | GGNNCC | 8 cut(s) | 213, 318, 474, 621, 1561, 1665, 2315, 3468 |
| NmeAIII | GCCGAG | 2 cut(s) | 752, 2942 |
| NmuCI | GTSAC | 1 cut(s) | 3538 |
| NspI | RCATGY | 1 cut(s) | 2429 |
| NspV | TTCGAA | 1 cut(s) | 3179 |
| OliI | CACNNNNGTG | 2 cut(s) | 1346, 2142 |
| PaeR7I | CTCGAG | 1 cut(s) | 3049 |
| PagI | TCATGA | 2 cut(s) | 652, 2784 |
| PceI | AGGCCT | 1 cut(s) | 2476 |
| PctI | GAATGC | 2 cut(s) | 830, 847 |
| PdmI | GAANNNNTTC | 5 cut(s) | 150, 561, 1509, 1558, 3368 |
| PflMI | CCANNNNNTGG | 1 cut(s) | 3071 |
| PfoI | TCCNGGA | 1 cut(s) | 861 |
| PkrI | GCNGC | 9 cut(s) | 288, 847, 1270, 1636, 1789, 2218, 2221, 3140, 3445 |
| PleI | GAGTC | 4 cut(s) | 139, 577, 1615, 2796 |
| PpsI | GAGTC | 4 cut(s) | 139, 577, 1615, 2796 |
| PpuMI | RGGWCCY | 1 cut(s) | 2313 |
| PshBI | ATTAAT | 1 cut(s) | 2465 |
| Psp124BI | GAGCTC | 2 cut(s) | 3628, 3669 |
| Psp5II | RGGWCCY | 1 cut(s) | 2313 |
| PspFI | CCCAGC | 3 cut(s) | 1782, 2912, 3054 |
| PspN4I | GGNNCC | 8 cut(s) | 213, 318, 474, 621, 1561, 1665, 2315, 3468 |
| PspPI | GGNCC | 3 cut(s) | 2313, 2577, 3074 |
| PspPPI | RGGWCCY | 1 cut(s) | 2313 |
| PsrI | GAACNNNNNNTAC | 2 cut(s) | 3570, 3602 |
| PstI | CTGCAG | 2 cut(s) | 2221, 3445 |
| PstNI | CAGNNNCTG | 3 cut(s) | 2636, 3230, 3542 |
| PsuI | RGATCY | 7 cut(s) | 386, 434, 533, 2398, 3274, 3285, 3466 |
| RsaI | GTAC | 3 cut(s) | 375, 1230, 2181 |
| RsaNI | GTAC | 3 cut(s) | 374, 1229, 2180 |
| RseI | CAYNNNNRTG | 4 cut(s) | 47, 1346, 2142, 2721 |
| SacI | GAGCTC | 2 cut(s) | 3628, 3669 |
| SatI | GCNGC | 9 cut(s) | 287, 846, 1269, 1635, 1788, 2217, 2220, 3139, 3444 |
| Sau96I | GGNCC | 3 cut(s) | 2313, 2577, 3074 |
| SchI | GAGTC | 4 cut(s) | 140, 578, 1616, 2797 |
| SexAI | ACCWGGT | 3 cut(s) | 406, 1142, 1957 |
| SfaNI | GCATC | 7 cut(s) | 273, 1281, 1363, 1894, 2623, 2875, 3455 |
| SfcI | CTRYAG | 3 cut(s) | 2217, 2404, 3441 |
| Sfr274I | CTCGAG | 1 cut(s) | 3049 |
| SfuI | TTCGAA | 1 cut(s) | 3179 |
| SinI | GGWCC | 2 cut(s) | 2313, 3074 |
| SlaI | CTCGAG | 1 cut(s) | 3049 |
| SmiMI | CAYNNNNRTG | 4 cut(s) | 47, 1346, 2142, 2721 |
| SmlI | CTYRAG | 2 cut(s) | 2735, 3049 |
| SmoI | CTYRAG | 2 cut(s) | 2735, 3049 |
| SseBI | AGGCCT | 1 cut(s) | 2476 |
| SspI | AATATT | 2 cut(s) | 1501, 2865 |
| SspMI | CTAG | 5 cut(s) | 1370, 1898, 2160, 2877, 3654 |
| SstI | GAGCTC | 2 cut(s) | 3628, 3669 |
| StuI | AGGCCT | 1 cut(s) | 2476 |
| StyI | CCWWGG | 5 cut(s) | 27, 2166, 2317, 2435, 3470 |
| TaaI | ACNGT | 9 cut(s) | 956, 1048, 1260, 1796, 1927, 2628, 3538, 3544, 3571 |
| TaiI | ACGT | 4 cut(s) | 635, 1492, 1510, 3456 |
| TaqII | GACCGA | 3 cut(s) | 269, 759, 1175 |
| TatI | WGTACW | 2 cut(s) | 1228, 2179 |
| TauI | GCSGC | 3 cut(s) | 289, 1637, 3141 |
| TscAI | CASTG | 6 cut(s) | 2087, 2538, 2765, 3263, 3547, 3637 |
| TseFI | GTSAC | 1 cut(s) | 3538 |
| TseI | GCWGC | 6 cut(s) | 845, 1268, 1787, 2216, 2219, 3443 |
| Tsp45I | GTSAC | 1 cut(s) | 3538 |
| TspGWI | ACGGA | 2 cut(s) | 1031, 2939 |
| TspRI | CASTG | 6 cut(s) | 2087, 2538, 2765, 3263, 3547, 3637 |
| Van91I | CCANNNNNTGG | 1 cut(s) | 3071 |
| VpaK11BI | GGWCC | 2 cut(s) | 2313, 3074 |
| VspI | ATTAAT | 1 cut(s) | 2465 |
| XceI | RCATGY | 1 cut(s) | 2429 |
| XcmI | CCANNNNNNNNNTGG | 1 cut(s) | 2442 |
| XhoI | CTCGAG | 1 cut(s) | 3049 |
| XmiI | GTMKAC | 1 cut(s) | 1089 |
| XmnI | GAANNNNTTC | 5 cut(s) | 150, 561, 1509, 1558, 3368 |
| XspI | CTAG | 5 cut(s) | 1370, 1898, 2160, 2877, 3654 |