Rorug04G0002000

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000004
OG0000592
Physical Location & Seq
Reverse (-)
399170 .. 409558
10389 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug04G0002000.1

Sequence Viewer

Length: 1824 bp
ATGAGAGTGGTGATGATGGAGTGTGCAATTCCGGGAAAGTTGCTTTGTGCTTCAACTTCAAGACTCTGGAATCCGAGGCCGAGGAAGGTAGTGTTGAGCAGAAGAAACACGGGACTGAGTGCCCACAGCAACAACTTGTGCAGCTCCTCTAAATTCAAGATTAAAGCTCACACATCACAGGTCGGCATTGCAAAGCCAACAAATTTGACTGATTCTGATATTCAGGGATTTGTTTGGCCTTCTCCAACAGATGAAATCCCATTTTGGAAGAAGGAGTTCCCTTCTTGGGATGCAAACTTGGAACTTCCCTCTGAACAAACCAAGGATTCCAAACTCATGCACATTGTTCATGTTACAGCTGAAATGGCACCAATAGCAAAAGTTGGTGGTCTTGGTGATGTTGTAACTGGACTTGCTCGAGCATGTTTATCACGTGGCCACACAGTGCATATAATGCTTCCTTTCTATGAGTGTATCCAGAAACATCAAATCAATGACTTGACGTTAATCACAACATATAACTCTTATCATGATGGAAACTGGATCCCCACTAATGCATATCATGGGGTAGTTTCAGGAATCCCAGTTATATTTCTTGAACCATCCTGTCAGTTCTTTAAGGGACATCAGGTGTATGGGGGTCCATACAATGAGCTGGAGGCATATATGTTCTTTAGTCGTGCTTGCCTTGAATGGATGCAGGTGACTGGAACACAACCTGATATCATTCATGTCCATGAGTGGCAGGCTGGTGCTTTACCCATACTTTATTGGGACATGTATCATCATCTTTCACTTAAGAAGCCGAGAATAGTATTGACAATCCATAACATGGAGCACTATGGTGAATGTAGACAAGAGCAACTTAGCATGTGTGGTCTTGATGGATCCCTCTATGCAACCTTTGACAAGGCAGTTGATGATCGAACTGTTGGTCACAATCCCGAACGGTTAAGCTTATTGAAAGGTGGTATTGTCTACAGCAATGCAGTAGTCACAGTTTCTCCAACATATCTCAAAGAGACACTCTGCTCTGGATGGCTTTCAAGTACTTTGATGAGAAATCGTGATAAGTACTTTGGTATAGTAAATGGAATAGACACTACGATGTGGAACCCTTCTACTGATGTTTTCTTGCCTTCGAAATTCAATGTTAAAAACTCTGAGGGCAAGAAGTTATGCAAATACTATGTTCAAAGGGGACTTGGTTTGGCCTCAGGAGACCACGTGACAGATACTACTCTCAAGGTGCCTTTGGTTGTCTGTATTACTCGCTTAGTTGCACAAAAGGGTCTTCATTTGATTACTCATGCAATCAAGCAAGTTGAAGAACTAGGTGGACAGATGGTTGTACTGGGAAAAGCCCCGGATCACCGGGTTGAAAGAGAATTTGAAGACCTTGCAGATTCGCTTAACCAAGGTTCTAGCATTCGGATTTTATTGATGTATAGTGAGGAGCTATCCCACTTACTTTATGCTGCTGCAGACATTGTTCTAGTTCCTTCCATGTATGAGCCATGTGGACTGGCCCAAATGATTGGCATGCGTTATGGGGCAGTCCCAGTAGTTAGAAAGACTGGCGGTCTTGCAGATACAGTCTTTGACATGGATGATGAGTCAAACCATGAGATGGCAAATGGGTTTGTTTTTGAAGGAATGGATGAAGCTTCCCTGAATTGTGCTCTAGATCGTGCATTTGCTTGCTATAGAAACAAGCCAGGAGAATGGAATTGCATTGTTAAGAAGGTAATGAAGATGGATAATAGCTGGAACAACACAGCTCGCAAGTACATTGAGATTTATGAATCAGTTACAGCATCATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00942 ko01100 ko01110 map00942 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

607

Amino Acids

68.02

Weight (kDa)

6.64

Isoelectric Point (pI)

32.97

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_transf_5 PF08323 114 - 342 1.7e-54 Starch synthase catalytic domain
Glyco_transf_4 PF13439 128 - 289 4.7e-08 Glycosyltransferase Family 4
Glycos_transf_1 PF00534 416 - 568 1.6e-13 Glycosyl transferases group 1
Glyco_trans_1_4 PF13692 418 - 560 3.7e-10 Glycosyl transferases group 1
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000592)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04190 FvH4_2g02610 FvH4_3g13000 FvH4_4g03650 FvH4_4g03660 FvH4_4g09980
malus_domestica MD00G1134400.v1.1 MD16G1266400.v1.1 MD16G1266500.v1.1
prunus_persica Prupe.1G090400_v2.0.a1 Prupe.1G090500_v2.0.a1 Prupe.1G091000_v2.0.a1 Prupe.1G091100_v2.0.a1 Prupe.1G091100_v2.0.a1 Prupe.1G091200_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0393031 RchiOBHm_Chr4g0393051 RchiOBHm_Chr4g0393101 RchiOBHm_Chr4g0393121 RchiOBHm_Chr4g0393161 RchiOBHm_Chr4g0393201 RchiOBHm_Chr4g0393261 RchiOBHm_Chr4g0393271 RchiOBHm_Chr4g0403471
rosa_laevigata RLG00000002145 RLG00000008974 RLG00000009768 RLG00000009772
rosa_multiflora Rmu_co8079702.1_g000001 Rmu_co8169716.1_g000001 Rmu_co8283697.1_g000001 Rmu_co8424409.1_g000001 Rmu_co8489763.1_g000001 Rmu_co8489763.1_g000002 Rmu_sc0001590.1_g000014 Rmu_sc0004325.1_g000016 Rmu_sc0004828.1_g000004 Rmu_sc0004828.1_g000005 Rmu_sc0004828.1_g000007 Rmu_sc0007727.1_g000018 Rmu_sc0008186.1_g000005 Rmu_sc0008339.1_g000004 Rmu_sc0008339.1_g000008 Rmu_sc0009057.1_g000008 Rmu_sc0017178.1_g000006
rosa_roxburghii Rroxscaffold_5G00338130 Rroxscaffold_5G00338210 Rroxscaffold_5G00348140
rosa_rugosa Rorug04G0002000 Rorug04G0002100 Rorug04G0002100 Rorug04G0002200 Rorug04G0002300 Rorug04G0002400 Rorug04G0002500 Rorug04G0002600 Rorug04G0043500
rosa_samantha Rh4AG045600 Rh4AG045700 Rh4AG046000 Rh4AG046100 Rh4AG046200 Rh4AG046300 Rh4AG119100 Rh4BG041500 Rh4BG041700 Rh4BG041900 Rh4BG042000 Rh4BG112000 Rh4DG043000 Rh4DG043400 Rh4DG043500 Rh4DG043600 Rh4DG043700 Rh4DG111700 Rh7DG343500
rosa_wichuraiana Rw4G003590 Rw4G003620 Rw4G003660 Rw4G009660 Rw7G029290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 691
Acc36I ACCTGC 1 cut(s) 691
AccB1I GGYRCC 2 cut(s) 367, 1249
AccB7I CCANNNNNTGG 2 cut(s) 832, 1630
AccI GTMKAC 2 cut(s) 853, 978
AciI CCGC 1 cut(s) 1581
AclWI GGATC 5 cut(s) 538, 551, 882, 895, 1377
AcoI YGGCCR 1 cut(s) 436
AcsI RAATTY 4 cut(s) 152, 202, 1145, 1388
AcvI CACGTG 2 cut(s) 434, 1228
AdeI CACNNNGTG 1 cut(s) 445
AfaI GTAC 4 cut(s) 1051, 1076, 1353, 1790
AfiI CCNNNNNNNGG 3 cut(s) 286, 832, 1630
AflII CTTAAG 1 cut(s) 797
AflIII ACRYGT 1 cut(s) 777
AhdI GACNNNNNGTC 1 cut(s) 1581
AjnI CCWGG 1 cut(s) 1717
AleI CACNNNNGTG 1 cut(s) 843
AluBI AGCT 9 cut(s) 144, 167, 359, 655, 957, 1459, 1667, 1767, 1781
AluI AGCT 9 cut(s) 144, 167, 359, 655, 957, 1459, 1667, 1767, 1781
Alw21I GWGCWC 2 cut(s) 840, 1684
Alw26I GTCTC 2 cut(s) 1016, 1215
AlwI GGATC 5 cut(s) 538, 551, 882, 895, 1377
Ama87I CYCGRG 1 cut(s) 417
AoxI GGCC 5 cut(s) 77, 236, 436, 1212, 1527
ApeKI GCWGC 3 cut(s) 141, 1478, 1481
ApoI RAATTY 4 cut(s) 152, 202, 1145, 1388
ArsI GACNNNNNNTTYG 2 cut(s) 919, 951
Asp700I GAANNNNTTC 1 cut(s) 275
AspS9I GGNCC 2 cut(s) 641, 1528
AsuC2I CCSGG 3 cut(s) 33, 1367, 1376
AsuHPI GGTGA 5 cut(s) 22, 407, 715, 857, 1364
AsuII TTCGAA 1 cut(s) 1142
AvaI CYCGRG 1 cut(s) 417
AvaII GGWCC 1 cut(s) 641
AxyI CCTNAGG 1 cut(s) 1216
BaeGI GKGCMC 1 cut(s) 124
BalI TGGCCA 1 cut(s) 438
BamHI GGATCC 2 cut(s) 543, 887
BanI GGYRCC 2 cut(s) 367, 1249
BbrPI CACGTG 2 cut(s) 434, 1228
BbsI GAAGAC 2 cut(s) 1286, 1401
Bbv12I GWGCWC 2 cut(s) 840, 1684
BbvI GCAGC 3 cut(s) 153, 1465, 1468
BccI CCATC 8 cut(s) 10, 527, 610, 878, 1032, 1339, 1624, 1750
BciT130I CCWGG 1 cut(s) 1719
BciVI GTATCC 1 cut(s) 485
BcnI CCSGG 3 cut(s) 33, 1367, 1376
BcoDI GTCTC 2 cut(s) 1016, 1215
BfaI CTAG 4 cut(s) 1334, 1425, 1496, 1685
BfmI CTRYAG 3 cut(s) 979, 1482, 1705
BfrI CTTAAG 1 cut(s) 797
BfuAI ACCTGC 1 cut(s) 691
BfuI GTATCC 1 cut(s) 485
BisI GCNGC 3 cut(s) 142, 1479, 1482
BlsI GCNGC 3 cut(s) 143, 1480, 1483
BmcAI AGTACT 2 cut(s) 1051, 1076
Bme1390I CCNGG 4 cut(s) 33, 1367, 1376, 1719
Bme18I GGWCC 1 cut(s) 641
BmeRI GACNNNNNGTC 1 cut(s) 1581
BmeT110I CYCGRG 1 cut(s) 417
BmgT120I GGNCC 2 cut(s) 641, 1528
BmiI GGNNCC 6 cut(s) 369, 545, 642, 889, 1115, 1251
BmrFI CCNGG 4 cut(s) 33, 1367, 1376, 1719
BmrI ACTGGG 3 cut(s) 578, 1364, 1556
BmsI GCATC 2 cut(s) 280, 687
BmuI ACTGGG 3 cut(s) 578, 1364, 1556
BpiI GAAGAC 2 cut(s) 1286, 1401
BpmI CTGGAG 1 cut(s) 677
Bpu14I TTCGAA 1 cut(s) 1142
BpuEI CTTGAG 1 cut(s) 1229
BpuMI CCSGG 3 cut(s) 33, 1367, 1376
BsaAI YACGTR 2 cut(s) 434, 1228
BsaI GGTCTC 1 cut(s) 1215
BsaJI CCNNGG 5 cut(s) 74, 80, 321, 1365, 1417
BsaXI ACNNNNNCTCC 4 cut(s) 988, 1018, 1212, 1242
Bsc4I CCNNNNNNNGG 3 cut(s) 286, 832, 1630
Bse1I ACTGG 8 cut(s) 412, 545, 584, 712, 1359, 1530, 1562, 1582
Bse21I CCTNAGG 1 cut(s) 1216
Bse3DI GCAATG 2 cut(s) 186, 991
BseBI CCWGG 1 cut(s) 1719
BseDI CCNNGG 5 cut(s) 74, 80, 321, 1365, 1417
BseGI GGATG 6 cut(s) 295, 602, 702, 1043, 1615, 1666
BseLI CCNNNNNNNGG 3 cut(s) 286, 832, 1630
BseMI GCAATG 2 cut(s) 186, 991
BseMII CTCAG 3 cut(s) 107, 1155, 1230
BseNI ACTGG 8 cut(s) 412, 545, 584, 712, 1359, 1530, 1562, 1582
BseRI GAGGAG 2 cut(s) 136, 1469
BseSI GKGCMC 1 cut(s) 124
BseXI GCAGC 3 cut(s) 153, 1465, 1468
BsgI GTGCAG 1 cut(s) 160
BshFI GGCC 5 cut(s) 79, 238, 438, 1214, 1529
BshNI GGYRCC 2 cut(s) 367, 1249
BsiHKAI GWGCWC 2 cut(s) 840, 1684
BsiHKCI CYCGRG 1 cut(s) 417
BsiSI CCGG 3 cut(s) 32, 1367, 1375
BslFI GGGAC 5 cut(s) 126, 636, 788, 1215, 1544
BslI CCNNNNNNNGG 3 cut(s) 286, 832, 1630
BsmAI GTCTC 2 cut(s) 1016, 1215
BsmFI GGGAC 5 cut(s) 126, 636, 788, 1215, 1544
BsmI GAATGC 1 cut(s) 1428
BsnI GGCC 5 cut(s) 79, 238, 438, 1214, 1529
Bso31I GGTCTC 1 cut(s) 1215
BsoBI CYCGRG 1 cut(s) 417
Bsp119I TTCGAA 1 cut(s) 1142
Bsp1286I GDGCHC 3 cut(s) 124, 840, 1684
Bsp143I GATC 5 cut(s) 543, 887, 922, 1369, 1687
BspACI CCGC 1 cut(s) 1581
BspANI GGCC 5 cut(s) 79, 238, 438, 1214, 1529
BspCNI CTCAG 3 cut(s) 108, 1156, 1229
BspHI TCATGA 2 cut(s) 529, 1820
BspLI GGNNCC 6 cut(s) 369, 545, 642, 889, 1115, 1251
BspMAI CTGCAG 1 cut(s) 1486
BspMI ACCTGC 1 cut(s) 691
BspPI GGATC 5 cut(s) 538, 551, 882, 895, 1377
BspT104I TTCGAA 1 cut(s) 1142
BspT107I GGYRCC 2 cut(s) 367, 1249
BspTI CTTAAG 1 cut(s) 797
BspTNI GGTCTC 1 cut(s) 1215
BsrDI GCAATG 2 cut(s) 186, 991
BsrI ACTGG 8 cut(s) 412, 545, 584, 712, 1359, 1530, 1562, 1582
BssECI CCNNGG 5 cut(s) 74, 80, 321, 1365, 1417
BssMI GATC 5 cut(s) 543, 887, 922, 1369, 1687
BssT1I CCWWGG 2 cut(s) 321, 1417
Bst2UI CCWGG 1 cut(s) 1719
Bst4CI ACNGT 5 cut(s) 445, 931, 951, 1000, 1597
BstAFI CTTAAG 1 cut(s) 797
BstAPI GCANNNNNTGC 1 cut(s) 454
BstBAI YACGTR 2 cut(s) 434, 1228
BstBI TTCGAA 1 cut(s) 1142
BstC8I GCNNGC 5 cut(s) 685, 747, 1544, 1702, 1783
BstDEI CTNAG 5 cut(s) 116, 866, 1164, 1216, 1276
BstF5I GGATG 6 cut(s) 295, 602, 702, 1043, 1615, 1666
BstKTI GATC 5 cut(s) 546, 890, 925, 1372, 1690
BstMAI GTCTC 2 cut(s) 1016, 1215
BstMBI GATC 5 cut(s) 543, 887, 922, 1369, 1687
BstMWI GCNNNNNNNGC 3 cut(s) 365, 374, 454
BstNI CCWGG 1 cut(s) 1719
BstNSI RCATGY 4 cut(s) 426, 781, 874, 1546
BstSCI CCNGG 4 cut(s) 31, 1365, 1374, 1717
BstSFI CTRYAG 3 cut(s) 979, 1482, 1705
BstSLI GKGCMC 1 cut(s) 124
BstV1I GCAGC 3 cut(s) 153, 1465, 1468
BstV2I GAAGAC 2 cut(s) 1286, 1401
BstX2I RGATCY 2 cut(s) 543, 887
BstXI CCANNNNNNTGG 2 cut(s) 1538, 1725
BstYI RGATCY 2 cut(s) 543, 887
Bsu36I CCTNAGG 1 cut(s) 1216
BsuI GTATCC 1 cut(s) 485
BsuRI GGCC 5 cut(s) 79, 238, 438, 1214, 1529
BtsCI GGATG 6 cut(s) 295, 602, 702, 1043, 1615, 1666
BtsIMutI CAGTG 1 cut(s) 450
BveI ACCTGC 1 cut(s) 691
Cac8I GCNNGC 5 cut(s) 685, 747, 1544, 1702, 1783
CciI TCATGA 2 cut(s) 529, 1820
Cfr13I GGNCC 2 cut(s) 641, 1528
Csp6I GTAC 4 cut(s) 1050, 1075, 1352, 1789
CviQI GTAC 4 cut(s) 1050, 1075, 1352, 1789
DdeI CTNAG 5 cut(s) 116, 866, 1164, 1216, 1276
DpnI GATC 5 cut(s) 545, 889, 924, 1371, 1689
DpnII GATC 5 cut(s) 543, 887, 922, 1369, 1687
DraIII CACNNNGTG 1 cut(s) 445
DriI GACNNNNNGTC 1 cut(s) 1581
EaeI YGGCCR 1 cut(s) 436
Eam1105I GACNNNNNGTC 1 cut(s) 1581
Eco130I CCWWGG 2 cut(s) 321, 1417
Eco31I GGTCTC 1 cut(s) 1215
Eco32I GATATC 1 cut(s) 724
Eco47I GGWCC 1 cut(s) 641
Eco72I CACGTG 2 cut(s) 434, 1228
Eco81I CCTNAGG 1 cut(s) 1216
Eco88I CYCGRG 1 cut(s) 417
EcoRII CCWGG 1 cut(s) 1717
EcoRV GATATC 1 cut(s) 724
EcoT14I CCWWGG 2 cut(s) 321, 1417
EcoT22I ATGCAT 1 cut(s) 559
ErhI CCWWGG 2 cut(s) 321, 1417
FalI AAGNNNNNCTT 2 cut(s) 849, 881
FaqI GGGAC 5 cut(s) 126, 636, 788, 1215, 1544
FblI GTMKAC 2 cut(s) 853, 978
Fnu4HI GCNGC 3 cut(s) 142, 1479, 1482
FokI GGATG 6 cut(s) 302, 589, 709, 1050, 1622, 1673
Fsp4HI GCNGC 3 cut(s) 142, 1479, 1482
FspBI CTAG 4 cut(s) 1334, 1425, 1496, 1685
GluI GCNGC 3 cut(s) 142, 1479, 1482
GsuI CTGGAG 1 cut(s) 677
HaeIII GGCC 5 cut(s) 79, 238, 438, 1214, 1529
HapII CCGG 3 cut(s) 32, 1367, 1375
HindIII AAGCTT 2 cut(s) 955, 1665
HinfI GANTC 8 cut(s) 63, 70, 212, 326, 579, 1406, 1616, 1805
HpaII CCGG 3 cut(s) 32, 1367, 1375
HphI GGTGA 5 cut(s) 22, 407, 715, 857, 1364
Hpy166II GTNNAC 4 cut(s) 854, 979, 1340, 1523
Hpy188I TCNGA 5 cut(s) 75, 217, 313, 1165, 1434
Hpy8I GTNNAC 4 cut(s) 854, 979, 1340, 1523
HpyAV CCTTC 9 cut(s) 79, 249, 265, 291, 1128, 1149, 1512, 1646, 1738
HpyCH4III ACNGT 5 cut(s) 445, 931, 951, 1000, 1597
HpyCH4IV ACGT 3 cut(s) 433, 503, 1227
HpyF10VI GCNNNNNNNGC 3 cut(s) 365, 374, 454
HpyF3I CTNAG 5 cut(s) 116, 866, 1164, 1216, 1276
HpySE526I ACGT 3 cut(s) 433, 503, 1227
Kzo9I GATC 5 cut(s) 543, 887, 922, 1369, 1687
LmnI GCTCC 3 cut(s) 149, 835, 1456
Lsp1109I GCAGC 3 cut(s) 153, 1465, 1468
LweI GCATC 2 cut(s) 280, 687
MaeI CTAG 4 cut(s) 1334, 1425, 1496, 1685
MaeII ACGT 3 cut(s) 433, 503, 1227
MaeIII GTNAC 7 cut(s) 352, 403, 703, 935, 994, 1228, 1810
MalI GATC 5 cut(s) 545, 889, 924, 1371, 1689
MboI GATC 5 cut(s) 543, 887, 922, 1369, 1687
MboII GAAGA 6 cut(s) 114, 280, 1286, 1340, 1406, 1765
MflI RGATCY 2 cut(s) 543, 887
MhlI GDGCHC 3 cut(s) 124, 840, 1684
MlsI TGGCCA 1 cut(s) 438
MluCI AATT 7 cut(s) 27, 152, 202, 1145, 1388, 1675, 1729
MluNI TGGCCA 1 cut(s) 438
MlyI GAGTC 2 cut(s) 57, 1625
MmeI TCCRAC 2 cut(s) 269, 1031
MnlI CCTC 9 cut(s) 69, 75, 157, 319, 652, 902, 1159, 1225, 1447
Mox20I TGGCCA 1 cut(s) 438
Mph1103I ATGCAT 1 cut(s) 559
MroXI GAANNNNTTC 1 cut(s) 275
MscI TGGCCA 1 cut(s) 438
MseI TTAA 8 cut(s) 162, 506, 618, 798, 953, 1155, 1413, 1740
MslI CAYNNNNRTG 3 cut(s) 735, 843, 1106
Msp20I TGGCCA 1 cut(s) 438
MspA1I CMGCKG 1 cut(s) 359
MspCI CTTAAG 1 cut(s) 797
MspI CCGG 3 cut(s) 32, 1367, 1375
MspR9I CCNGG 4 cut(s) 33, 1367, 1376, 1719
Mva1269I GAATGC 1 cut(s) 1428
MvaI CCWGG 1 cut(s) 1719
MwoI GCNNNNNNNGC 3 cut(s) 365, 374, 454
NciI CCSGG 3 cut(s) 33, 1367, 1376
NdeII GATC 5 cut(s) 543, 887, 922, 1369, 1687
NlaIV GGNNCC 6 cut(s) 369, 545, 642, 889, 1115, 1251
NmeAIII GCCGAG 2 cut(s) 105, 831
NmuCI GTSAC 4 cut(s) 703, 935, 994, 1228
NsiI ATGCAT 1 cut(s) 559
NspI RCATGY 4 cut(s) 426, 781, 874, 1546
NspV TTCGAA 1 cut(s) 1142
OliI CACNNNNGTG 1 cut(s) 843
PaeI GCATGC 1 cut(s) 1546
PaeR7I CTCGAG 1 cut(s) 417
PagI TCATGA 2 cut(s) 529, 1820
PaqCI CACCTGC 1 cut(s) 691
PciI ACATGT 1 cut(s) 777
PctI GAATGC 1 cut(s) 1428
PdmI GAANNNNTTC 1 cut(s) 275
PfeI GAWTC 6 cut(s) 70, 212, 326, 579, 1406, 1805
PflMI CCANNNNNTGG 2 cut(s) 832, 1630
PfoI TCCNGGA 1 cut(s) 31
PkrI GCNGC 3 cut(s) 143, 1480, 1483
PleI GAGTC 2 cut(s) 57, 1624
PmaCI CACGTG 2 cut(s) 434, 1228
PmlI CACGTG 2 cut(s) 434, 1228
PpsI GAGTC 2 cut(s) 57, 1624
Ppu21I YACGTR 2 cut(s) 434, 1228
PscI ACATGT 1 cut(s) 777
Psp6I CCWGG 1 cut(s) 1717
PspCI CACGTG 2 cut(s) 434, 1228
PspGI CCWGG 1 cut(s) 1717
PspN4I GGNNCC 6 cut(s) 369, 545, 642, 889, 1115, 1251
PspPI GGNCC 2 cut(s) 641, 1528
PspXI VCTCGAGB 1 cut(s) 417
PstI CTGCAG 1 cut(s) 1486
PsuI RGATCY 2 cut(s) 543, 887
PvuII CAGCTG 1 cut(s) 359
RsaI GTAC 4 cut(s) 1051, 1076, 1353, 1790
RsaNI GTAC 4 cut(s) 1050, 1075, 1352, 1789
RseI CAYNNNNRTG 3 cut(s) 735, 843, 1106
SaqAI TTAA 8 cut(s) 162, 506, 618, 798, 953, 1155, 1413, 1740
SatI GCNGC 3 cut(s) 142, 1479, 1482
Sau3AI GATC 5 cut(s) 543, 887, 922, 1369, 1687
Sau96I GGNCC 2 cut(s) 641, 1528
ScaI AGTACT 2 cut(s) 1051, 1076
SchI GAGTC 2 cut(s) 57, 1625
ScrFI CCNGG 4 cut(s) 33, 1367, 1376, 1719
SduI GDGCHC 3 cut(s) 124, 840, 1684
SfaNI GCATC 2 cut(s) 280, 687
SfcI CTRYAG 3 cut(s) 979, 1482, 1705
Sfr274I CTCGAG 1 cut(s) 417
SfuI TTCGAA 1 cut(s) 1142
SinI GGWCC 1 cut(s) 641
SlaI CTCGAG 1 cut(s) 417
SmiMI CAYNNNNRTG 3 cut(s) 735, 843, 1106
SmlI CTYRAG 3 cut(s) 417, 797, 1244
SmoI CTYRAG 3 cut(s) 417, 797, 1244
SphI GCATGC 1 cut(s) 1546
Sse9I AATT 7 cut(s) 27, 152, 202, 1145, 1388, 1675, 1729
SsiI CCGC 1 cut(s) 1581
SspMI CTAG 4 cut(s) 1334, 1425, 1496, 1685
StyD4I CCNGG 4 cut(s) 31, 1365, 1374, 1717
StyI CCWWGG 2 cut(s) 321, 1417
TaaI ACNGT 5 cut(s) 445, 931, 951, 1000, 1597
TaiI ACGT 3 cut(s) 436, 506, 1230
TaqI TCGA 3 cut(s) 418, 925, 1142
TasI AATT 7 cut(s) 27, 152, 202, 1145, 1388, 1675, 1729
TatI WGTACW 4 cut(s) 1049, 1074, 1351, 1788
TfiI GAWTC 6 cut(s) 70, 212, 326, 579, 1406, 1805
Tru1I TTAA 8 cut(s) 162, 506, 618, 798, 953, 1155, 1413, 1740
Tru9I TTAA 8 cut(s) 162, 506, 618, 798, 953, 1155, 1413, 1740
TscAI CASTG 1 cut(s) 450
TseFI GTSAC 4 cut(s) 703, 935, 994, 1228
TseI GCWGC 3 cut(s) 141, 1478, 1481
Tsp45I GTSAC 4 cut(s) 703, 935, 994, 1228
TspDTI ATGAA 7 cut(s) 267, 338, 719, 1286, 1677, 1766, 1818
TspRI CASTG 1 cut(s) 450
Van91I CCANNNNNTGG 2 cut(s) 832, 1630
Vha464I CTTAAG 1 cut(s) 797
VpaK11BI GGWCC 1 cut(s) 641
XapI RAATTY 4 cut(s) 152, 202, 1145, 1388
XbaI TCTAGA 1 cut(s) 1684
XceI RCATGY 4 cut(s) 426, 781, 874, 1546
XhoI CTCGAG 1 cut(s) 417
XmiI GTMKAC 2 cut(s) 853, 978
XmnI GAANNNNTTC 1 cut(s) 275
XspI CTAG 4 cut(s) 1334, 1425, 1496, 1685
ZrmI AGTACT 2 cut(s) 1051, 1076
Zsp2I ATGCAT 1 cut(s) 559
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.