Prupe.1G091200_v2.0.a1

Belongs to the UDP-glycosyltransferase family

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
OG0000592
Physical Location & Seq
Reverse (-)
6866711 .. 6869607
2897 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G091200.1

Sequence Viewer

Length: 534 bp
ATGGTAGGAAACCCCAAACCCCAAACTCACCATGTTGCCGTTTTGGCCTTCCCTTTTGGGAGCCACTCAAGCGCTCTTCTCGACGTTGTTCTCAAACTAGCTCCAGCTTCCCCACACGTCCTCTTCTCCTTCTTCACCACTTCTAGAGCGAACACCTCCCTTCTCTCCAAAGTCTCGCCTTCGAGCTTCCACAACGTTGAGCCTCACGACGTGGCGGATGGGTTGCCTGAGGGTTTCGTGCCCTCAGCCAACTTTGAGGAAGCTATCGGGTTGTTTTTGAAGGCGGCGCCCGGTAACTTCATGACGGGTTTGAAGAACGCCGAGGCGGCGACGGGTTTGAAGGTCAGGTGTTTGGTGACCGATGCGTTCTTTTGGTTCGGGGGAGATATGTCGGAGGAGATCAAAGTGCCCTGGGTGCCGGTTTGGACTAGTGGACCACGGTCACTTCTTGTTCATGTAGAGACCGACTTCATGCGGGAAAGGGTTGGAACCGTTACTGGTAAGCAATCAATTTCATTTAATTGCATTTTGTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
ko00942 ko01100 ko01110 map00942 map01100 map01110
Pfam Domains
Protein Families
UDPGT

Protein Analysis

178

Amino Acids

19.11

Weight (kDa)

6.36

Isoelectric Point (pI)

37.31

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000592)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04190 FvH4_2g02610 FvH4_3g13000 FvH4_4g03650 FvH4_4g03660 FvH4_4g09980
malus_domestica MD00G1134400.v1.1 MD16G1266400.v1.1 MD16G1266500.v1.1
prunus_persica Prupe.1G090400_v2.0.a1 Prupe.1G090500_v2.0.a1 Prupe.1G091000_v2.0.a1 Prupe.1G091100_v2.0.a1 Prupe.1G091100_v2.0.a1 Prupe.1G091200_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0393031 RchiOBHm_Chr4g0393051 RchiOBHm_Chr4g0393101 RchiOBHm_Chr4g0393121 RchiOBHm_Chr4g0393161 RchiOBHm_Chr4g0393201 RchiOBHm_Chr4g0393261 RchiOBHm_Chr4g0393271 RchiOBHm_Chr4g0403471
rosa_laevigata RLG00000002145 RLG00000008974 RLG00000009768 RLG00000009772
rosa_multiflora Rmu_co8079702.1_g000001 Rmu_co8169716.1_g000001 Rmu_co8283697.1_g000001 Rmu_co8424409.1_g000001 Rmu_co8489763.1_g000001 Rmu_co8489763.1_g000002 Rmu_sc0001590.1_g000014 Rmu_sc0004325.1_g000016 Rmu_sc0004828.1_g000004 Rmu_sc0004828.1_g000005 Rmu_sc0004828.1_g000007 Rmu_sc0007727.1_g000018 Rmu_sc0008186.1_g000005 Rmu_sc0008339.1_g000004 Rmu_sc0008339.1_g000008 Rmu_sc0009057.1_g000008 Rmu_sc0017178.1_g000006
rosa_roxburghii Rroxscaffold_5G00338130 Rroxscaffold_5G00338210 Rroxscaffold_5G00348140
rosa_rugosa Rorug04G0002000 Rorug04G0002100 Rorug04G0002100 Rorug04G0002200 Rorug04G0002300 Rorug04G0002400 Rorug04G0002500 Rorug04G0002600 Rorug04G0043500
rosa_samantha Rh4AG045600 Rh4AG045700 Rh4AG046000 Rh4AG046100 Rh4AG046200 Rh4AG046300 Rh4AG119100 Rh4BG041500 Rh4BG041700 Rh4BG041900 Rh4BG042000 Rh4BG112000 Rh4DG043000 Rh4DG043400 Rh4DG043500 Rh4DG043600 Rh4DG043700 Rh4DG111700 Rh7DG343500
rosa_wichuraiana Rw4G003590 Rw4G003620 Rw4G003660 Rw4G009660 Rw7G029290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 2 cut(s) 286, 415
AciI CCGC 4 cut(s) 215, 284, 326, 475
AclI AACGTT 1 cut(s) 195
AcyI GRCGYC 1 cut(s) 287
AdeI CACNNNGTG 1 cut(s) 211
AfeI AGCGCT 1 cut(s) 73
AflIII ACRYGT 1 cut(s) 115
AgsI TTSAA 3 cut(s) 280, 313, 340
AhlI ACTAGT 1 cut(s) 428
AjiI CACGTC 2 cut(s) 118, 211
AjnI CCWGG 1 cut(s) 410
AluBI AGCT 4 cut(s) 101, 107, 186, 263
AluI AGCT 4 cut(s) 101, 107, 186, 263
Alw26I GTCTC 2 cut(s) 178, 455
Aor51HI AGCGCT 1 cut(s) 73
AoxI GGCC 1 cut(s) 45
AspLEI GCGC 2 cut(s) 74, 289
AspS9I GGNCC 1 cut(s) 434
AsuC2I CCSGG 1 cut(s) 291
AsuHPI GGTGA 3 cut(s) 20, 127, 367
AvaII GGWCC 1 cut(s) 434
AxyI CCTNAGG 1 cut(s) 228
BaeGI GKGCMC 2 cut(s) 243, 411
BanI GGYRCC 2 cut(s) 286, 415
BbvCI CCTCAGC 1 cut(s) 244
BccI CCATC 1 cut(s) 212
BceAI ACGGC 1 cut(s) 23
BciT130I CCWGG 1 cut(s) 412
BcnI CCSGG 1 cut(s) 291
BcoDI GTCTC 2 cut(s) 178, 455
BcuI ACTAGT 1 cut(s) 428
BfaI CTAG 3 cut(s) 98, 144, 429
BfoI RGCGCY 2 cut(s) 75, 290
BglI GCCNNNNNGGC 2 cut(s) 44, 326
BisI GCNGC 2 cut(s) 285, 327
BlsI GCNGC 2 cut(s) 286, 328
Bme1390I CCNGG 2 cut(s) 291, 412
Bme18I GGWCC 1 cut(s) 434
BmgBI CACGTC 2 cut(s) 118, 211
BmgT120I GGNCC 1 cut(s) 434
BmiI GGNNCC 4 cut(s) 62, 288, 417, 490
BmrFI CCNGG 2 cut(s) 291, 412
BmsI GCATC 1 cut(s) 352
BoxI GACNNNNGTC 1 cut(s) 439
BpmI CTGGAG 1 cut(s) 87
Bpu10I CCTNAGC 1 cut(s) 244
BpuEI CTTGAG 1 cut(s) 52
BpuMI CCSGG 1 cut(s) 291
BsaHI GRCGYC 1 cut(s) 287
BsaI GGTCTC 1 cut(s) 455
BsaJI CCNNGG 4 cut(s) 321, 410, 411, 437
Bse118I RCCGGY 1 cut(s) 418
Bse1I ACTGG 1 cut(s) 502
Bse21I CCTNAGG 1 cut(s) 228
BseBI CCWGG 1 cut(s) 412
BseDI CCNNGG 4 cut(s) 321, 410, 411, 437
BseGI GGATG 1 cut(s) 223
BseMII CTCAG 2 cut(s) 219, 258
BseNI ACTGG 1 cut(s) 502
BseRI GAGGAG 1 cut(s) 410
BseSI GKGCMC 2 cut(s) 243, 411
BshFI GGCC 1 cut(s) 47
BshNI GGYRCC 2 cut(s) 286, 415
BsiSI CCGG 2 cut(s) 291, 419
BsmAI GTCTC 2 cut(s) 178, 455
BsnI GGCC 1 cut(s) 47
Bso31I GGTCTC 1 cut(s) 455
Bsp1286I GDGCHC 2 cut(s) 243, 411
Bsp143I GATC 1 cut(s) 399
BspACI CCGC 4 cut(s) 215, 284, 326, 475
BspANI GGCC 1 cut(s) 47
BspCNI CTCAG 2 cut(s) 220, 257
BspHI TCATGA 1 cut(s) 300
BspLI GGNNCC 4 cut(s) 62, 288, 417, 490
BspQI GCTCTTC 1 cut(s) 81
BspT107I GGYRCC 2 cut(s) 286, 415
BspTNI GGTCTC 1 cut(s) 455
BsrFI RCCGGY 1 cut(s) 418
BsrI ACTGG 1 cut(s) 502
BssAI RCCGGY 1 cut(s) 418
BssECI CCNNGG 4 cut(s) 321, 410, 411, 437
BssMI GATC 1 cut(s) 399
BssNI GRCGYC 1 cut(s) 287
Bst2UI CCWGG 1 cut(s) 412
Bst4CI ACNGT 2 cut(s) 441, 493
Bst6I CTCTTC 2 cut(s) 81, 128
BstACI GRCGYC 1 cut(s) 287
BstDEI CTNAG 2 cut(s) 228, 244
BstDSI CCRYGG 1 cut(s) 437
BstEII GGTNACC 1 cut(s) 355
BstF5I GGATG 1 cut(s) 223
BstH2I RGCGCY 2 cut(s) 75, 290
BstHHI GCGC 2 cut(s) 74, 289
BstKTI GATC 1 cut(s) 402
BstMAI GTCTC 2 cut(s) 178, 455
BstMBI GATC 1 cut(s) 399
BstMWI GCNNNNNNNGC 4 cut(s) 44, 69, 326, 415
BstNI CCWGG 1 cut(s) 412
BstPAI GACNNNNGTC 1 cut(s) 439
BstPI GGTNACC 1 cut(s) 355
BstSCI CCNGG 2 cut(s) 289, 410
BstSLI GKGCMC 2 cut(s) 243, 411
Bsu36I CCTNAGG 1 cut(s) 228
BsuRI GGCC 1 cut(s) 47
BtgI CCRYGG 1 cut(s) 437
BtrI CACGTC 2 cut(s) 118, 211
BtsCI GGATG 1 cut(s) 223
CciI TCATGA 1 cut(s) 300
CfoI GCGC 2 cut(s) 74, 289
Cfr10I RCCGGY 1 cut(s) 418
Cfr13I GGNCC 1 cut(s) 434
CviAII CATG 4 cut(s) 32, 301, 455, 472
CviJI RGCY 8 cut(s) 47, 63, 101, 107, 186, 202, 248, 263
CviKI_1 RGCY 8 cut(s) 47, 63, 101, 107, 186, 202, 248, 263
DdeI CTNAG 2 cut(s) 228, 244
DinI GGCGCC 1 cut(s) 288
DpnI GATC 1 cut(s) 401
DpnII GATC 1 cut(s) 399
DraIII CACNNNGTG 1 cut(s) 211
Eam1104I CTCTTC 2 cut(s) 81, 128
EarI CTCTTC 2 cut(s) 81, 128
EciI GGCGGA 1 cut(s) 230
Eco31I GGTCTC 1 cut(s) 455
Eco47I GGWCC 1 cut(s) 434
Eco47III AGCGCT 1 cut(s) 73
Eco81I CCTNAGG 1 cut(s) 228
Eco91I GGTNACC 1 cut(s) 355
EcoO65I GGTNACC 1 cut(s) 355
EcoRII CCWGG 1 cut(s) 410
EgeI GGCGCC 1 cut(s) 288
EheI GGCGCC 1 cut(s) 288
FaeI CATG 4 cut(s) 35, 304, 458, 475
FaiI YATR 5 cut(s) 33, 302, 389, 456, 473
FatI CATG 4 cut(s) 31, 300, 454, 471
FauI CCCGC 1 cut(s) 468
Fnu4HI GCNGC 2 cut(s) 285, 327
FokI GGATG 1 cut(s) 230
Fsp4HI GCNGC 2 cut(s) 285, 327
FspBI CTAG 3 cut(s) 98, 144, 429
GlaI GCGC 2 cut(s) 73, 288
GluI GCNGC 2 cut(s) 285, 327
GsuI CTGGAG 1 cut(s) 87
HaeII RGCGCY 2 cut(s) 75, 290
HaeIII GGCC 1 cut(s) 47
HapII CCGG 2 cut(s) 291, 419
HhaI GCGC 2 cut(s) 74, 289
Hin1I GRCGYC 1 cut(s) 287
Hin1II CATG 4 cut(s) 35, 304, 458, 475
Hin6I GCGC 2 cut(s) 72, 287
HinP1I GCGC 2 cut(s) 72, 287
HpaII CCGG 2 cut(s) 291, 419
HphI GGTGA 3 cut(s) 20, 127, 367
Hpy166II GTNNAC 1 cut(s) 434
Hpy188I TCNGA 1 cut(s) 394
Hpy188III TCNNGA 4 cut(s) 80, 144, 206, 301
Hpy8I GTNNAC 1 cut(s) 434
Hpy99I CGWCG 3 cut(s) 86, 212, 334
HpyAV CCTTC 6 cut(s) 58, 139, 170, 189, 274, 334
HpyCH4III ACNGT 2 cut(s) 441, 493
HpyCH4IV ACGT 4 cut(s) 84, 117, 195, 210
HpyCH4V TGCA 1 cut(s) 525
HpyF10VI GCNNNNNNNGC 4 cut(s) 44, 69, 326, 415
HpyF3I CTNAG 2 cut(s) 228, 244
HpySE526I ACGT 4 cut(s) 84, 117, 195, 210
Hsp92I GRCGYC 1 cut(s) 287
Hsp92II CATG 4 cut(s) 35, 304, 458, 475
HspAI GCGC 2 cut(s) 72, 287
KasI GGCGCC 1 cut(s) 286
Kzo9I GATC 1 cut(s) 399
LguI GCTCTTC 1 cut(s) 81
LmnI GCTCC 2 cut(s) 60, 106
LpnPI CCDG 8 cut(s) 117, 240, 304, 331, 397, 424, 432, 483
LweI GCATC 1 cut(s) 352
MaeI CTAG 3 cut(s) 98, 144, 429
MaeII ACGT 4 cut(s) 84, 117, 195, 210
MaeIII GTNAC 4 cut(s) 293, 355, 441, 493
MalI GATC 1 cut(s) 401
MboI GATC 1 cut(s) 399
MboII GAAGA 4 cut(s) 68, 115, 124, 325
MhlI GDGCHC 2 cut(s) 243, 411
MluCI AATT 2 cut(s) 510, 520
Mly113I GGCGCC 1 cut(s) 287
MmeI TCCRAC 2 cut(s) 372, 466
MnlI CCTC 8 cut(s) 131, 166, 213, 223, 250, 253, 316, 388
MseI TTAA 1 cut(s) 519
MspI CCGG 2 cut(s) 291, 419
MspR9I CCNGG 2 cut(s) 291, 412
MvaI CCWGG 1 cut(s) 412
MwoI GCNNNNNNNGC 4 cut(s) 44, 69, 326, 415
NarI GGCGCC 1 cut(s) 287
NciI CCSGG 1 cut(s) 291
NdeII GATC 1 cut(s) 399
NlaIII CATG 4 cut(s) 35, 304, 458, 475
NlaIV GGNNCC 4 cut(s) 62, 288, 417, 490
NmeAIII GCCGAG 1 cut(s) 346
NmuCI GTSAC 2 cut(s) 355, 441
PagI TCATGA 1 cut(s) 300
PasI CCCWGGG 1 cut(s) 411
PciSI GCTCTTC 1 cut(s) 81
PkrI GCNGC 2 cut(s) 286, 328
PluTI GGCGCC 1 cut(s) 290
PshAI GACNNNNGTC 1 cut(s) 439
Psp1406I AACGTT 1 cut(s) 195
Psp6I CCWGG 1 cut(s) 410
PspEI GGTNACC 1 cut(s) 355
PspGI CCWGG 1 cut(s) 410
PspN4I GGNNCC 4 cut(s) 62, 288, 417, 490
PspPI GGNCC 1 cut(s) 434
SapI GCTCTTC 1 cut(s) 81
SaqAI TTAA 1 cut(s) 519
SatI GCNGC 2 cut(s) 285, 327
Sau3AI GATC 1 cut(s) 399
Sau96I GGNCC 1 cut(s) 434
ScrFI CCNGG 2 cut(s) 291, 412
SduI GDGCHC 2 cut(s) 243, 411
SfaNI GCATC 1 cut(s) 352
SfoI GGCGCC 1 cut(s) 288
SinI GGWCC 1 cut(s) 434
SmlI CTYRAG 1 cut(s) 67
SmoI CTYRAG 1 cut(s) 67
SpeI ACTAGT 1 cut(s) 428
Sse9I AATT 2 cut(s) 510, 520
SsiI CCGC 4 cut(s) 215, 284, 326, 475
SspDI GGCGCC 1 cut(s) 286
SspMI CTAG 3 cut(s) 98, 144, 429
StyD4I CCNGG 2 cut(s) 289, 410
TaaI ACNGT 2 cut(s) 441, 493
TaiI ACGT 4 cut(s) 87, 120, 198, 213
TaqI TCGA 2 cut(s) 81, 182
TaqII GACCGA 2 cut(s) 374, 479
TasI AATT 2 cut(s) 510, 520
TauI GCSGC 2 cut(s) 287, 329
Tru1I TTAA 1 cut(s) 519
Tru9I TTAA 1 cut(s) 519
TseFI GTSAC 2 cut(s) 355, 441
Tsp45I GTSAC 2 cut(s) 355, 441
TspDTI ATGAA 4 cut(s) 289, 443, 460, 504
VpaK11BI GGWCC 1 cut(s) 434
XbaI TCTAGA 1 cut(s) 143
XspI CTAG 3 cut(s) 98, 144, 429
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.