Rmu_sc0001590.1_g000014

Belongs to the UDP-glycosyltransferase family

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0001590.1
Physical Location & Seq
Reverse (-)
91834 .. 93678
1845 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0001590.1_g000014.1.cds

Sequence Viewer

Length: 1398 bp
atgagccacaaagctactagtactagtcctcaaaatgttgcagtcttagcttttccattcaactcccatcccgttgctcttcttcgattagtatgttccatttcaactattgccccggatatgcagttcaccttcttcaacatatctagatcaaatagctccctctttttaggttccaacaacaagggttgtgataatataaagccttacaacgtatgggatggcttaccagatggctacatacccctctccggaaatccaccaaggaagcacgatgagttgttcattgacaatgcacctcggatctttgagagagcaatcaaagaggtggaggctgaaacaggacacaagtttggctgcttgatttcggatgcattattctggtttgctggagacatagctaagaaaatgcacgtcccttgggtgaccttatggatttgtgacatacgctcactttttgttcatatcgagactgatataattagagatgaagtgggagctcctggacaagaaaataaaaccctggagttccttccggaattctcatatgagtttcgagcatctgacttacccacggagattgtatttggagaaatagaatcgccacctgtaagaatgatgcataaaatgggacagaagctgccacaagcaactgtagttgccgtcaactcatttgaaacaatggacttgaaagttactgaggaactgaagaaaagactccaaaagttggtccttgttggaccactacatcttgttcgcccagtacaatcaattgtatcagatgatgatgatgaggaggaggaggagaaggatggctgtttacagtggttggacaagcacgagcctgcatcggtaacatacatcagctttggaactctgtgggcactgccccccattgaggtagcagcattagctgaggcattagaggaaggcgaattcccctttctttggtcatttaggggaaatcaagaggactttccacaaggatttatcgaaagaaccaacaggttatcgataggaaaagtagttccatgggtgaaccaagagcaaatcctcaatcatacttcagtaggagtgcatgtaacacattgcggttggaactcaattttggagagtgtagctagtggtgtgcctatgattgggaggccgtacttttttgatcaaaatttaaatatgaggagtgtagaagttgtatggaagattggtgtgaggattgagggaggcgttttcactaaaacaggagcagtcaaggcattggaacaagttttatcacttgaacaaggaaaagaaatgagacaggcaattggaatccttaaacaacttgctcaggaggctattggaccaaatgggcgttcagctcaagacttgaaagctttggtagagatcatcaagtcctga
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
Pfam Domains
Protein Families

Protein Analysis

465

Amino Acids

52.05

Weight (kDa)

5.24

Isoelectric Point (pI)

53.94

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000592)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g04190 FvH4_2g02610 FvH4_3g13000 FvH4_4g03650 FvH4_4g03660 FvH4_4g09980
malus_domestica MD00G1134400.v1.1 MD16G1266400.v1.1 MD16G1266500.v1.1
prunus_persica Prupe.1G090400_v2.0.a1 Prupe.1G090500_v2.0.a1 Prupe.1G091000_v2.0.a1 Prupe.1G091100_v2.0.a1 Prupe.1G091100_v2.0.a1 Prupe.1G091200_v2.0.a1
rosa_chinensis RchiOBHm_Chr4g0393031 RchiOBHm_Chr4g0393051 RchiOBHm_Chr4g0393101 RchiOBHm_Chr4g0393121 RchiOBHm_Chr4g0393161 RchiOBHm_Chr4g0393201 RchiOBHm_Chr4g0393261 RchiOBHm_Chr4g0393271 RchiOBHm_Chr4g0403471
rosa_laevigata RLG00000002145 RLG00000008974 RLG00000009768 RLG00000009772
rosa_multiflora Rmu_co8079702.1_g000001 Rmu_co8169716.1_g000001 Rmu_co8283697.1_g000001 Rmu_co8424409.1_g000001 Rmu_co8489763.1_g000001 Rmu_co8489763.1_g000002 Rmu_sc0001590.1_g000014 Rmu_sc0004325.1_g000016 Rmu_sc0004828.1_g000004 Rmu_sc0004828.1_g000005 Rmu_sc0004828.1_g000007 Rmu_sc0007727.1_g000018 Rmu_sc0008186.1_g000005 Rmu_sc0008339.1_g000004 Rmu_sc0008339.1_g000008 Rmu_sc0009057.1_g000008 Rmu_sc0017178.1_g000006
rosa_roxburghii Rroxscaffold_5G00338130 Rroxscaffold_5G00338210 Rroxscaffold_5G00348140
rosa_rugosa Rorug04G0002000 Rorug04G0002100 Rorug04G0002100 Rorug04G0002200 Rorug04G0002300 Rorug04G0002400 Rorug04G0002500 Rorug04G0002600 Rorug04G0043500
rosa_samantha Rh4AG045600 Rh4AG045700 Rh4AG046000 Rh4AG046100 Rh4AG046200 Rh4AG046300 Rh4AG119100 Rh4BG041500 Rh4BG041700 Rh4BG041900 Rh4BG042000 Rh4BG112000 Rh4DG043000 Rh4DG043400 Rh4DG043500 Rh4DG043600 Rh4DG043700 Rh4DG111700 Rh7DG343500
rosa_wichuraiana Rw4G003590 Rw4G003620 Rw4G003660 Rw4G009660 Rw7G029290

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 727
AccIII TCCGGA 2 cut(s) 251, 535
AciI CCGC 1 cut(s) 1092
AclWI GGATC 1 cut(s) 311
AcsI RAATTY 3 cut(s) 539, 935, 1165
AcuI CTGAAG 2 cut(s) 728, 1050
AfaI GTAC 3 cut(s) 22, 765, 1151
AfiI CCNNNNNNNGG 5 cut(s) 251, 727, 898, 948, 1139
AgsI TTSAA 7 cut(s) 61, 105, 139, 677, 691, 1277, 1369
AhlI ACTAGT 2 cut(s) 17, 23
AjiI CACGTC 1 cut(s) 415
AjnI CCWGG 2 cut(s) 502, 522
AjuI GAANNNNNNNTTGG 4 cut(s) 1091, 1123, 1336, 1368
AloI GAACNNNNNNTCC 4 cut(s) 110, 142, 1011, 1043
Alw21I GWGCWC 1 cut(s) 502
Alw26I GTCTC 3 cut(s) 387, 464, 1288
AlwI GGATC 1 cut(s) 311
AlwNI CAGNNNCTG 1 cut(s) 640
Aor13HI TCCGGA 2 cut(s) 251, 535
AoxI GGCC 1 cut(s) 1145
ApeKI GCWGC 3 cut(s) 357, 640, 905
ApoI RAATTY 3 cut(s) 539, 935, 1165
AspS9I GGNCC 3 cut(s) 730, 740, 1340
AsuC2I CCSGG 1 cut(s) 116
AsuHPI GGTGA 3 cut(s) 121, 436, 1048
AvaII GGWCC 3 cut(s) 730, 740, 1340
BaeGI GKGCMC 1 cut(s) 886
BanII GRGCYC 1 cut(s) 502
BauI CACGAG 1 cut(s) 839
Bbv12I GWGCWC 1 cut(s) 502
BbvCI CCTCAGC 1 cut(s) 915
BbvI GCAGC 3 cut(s) 344, 627, 917
BccI CCATC 4 cut(s) 75, 215, 227, 806
BceAI ACGGC 2 cut(s) 647, 1132
BciT130I CCWGG 2 cut(s) 504, 524
BclI TGATCA 1 cut(s) 1159
BcnI CCSGG 1 cut(s) 116
BcoDI GTCTC 3 cut(s) 387, 464, 1288
BcuI ACTAGT 2 cut(s) 17, 23
BfaI CTAG 4 cut(s) 18, 24, 147, 1122
BfmI CTRYAG 1 cut(s) 654
BisI GCNGC 3 cut(s) 358, 641, 906
BlsI GCNGC 3 cut(s) 359, 642, 907
BmcAI AGTACT 1 cut(s) 22
Bme1390I CCNGG 3 cut(s) 116, 504, 524
Bme18I GGWCC 3 cut(s) 730, 740, 1340
BmgBI CACGTC 1 cut(s) 415
BmgT120I GGNCC 3 cut(s) 730, 740, 1340
BmiI GGNNCC 1 cut(s) 175
BmrFI CCNGG 3 cut(s) 116, 504, 524
BmrI ACTGGG 1 cut(s) 755
BmsI GCATC 4 cut(s) 361, 569, 609, 857
BmuI ACTGGG 1 cut(s) 755
BpmI CTGGAG 2 cut(s) 411, 545
Bpu10I CCTNAGC 2 cut(s) 915, 1326
BpuEI CTTGAG 1 cut(s) 1344
BpuMI CCSGG 1 cut(s) 116
Bsa29I ATCGAT 1 cut(s) 1013
BsaJI CCNNGG 7 cut(s) 114, 263, 299, 419, 522, 573, 1031
BsaWI WCCGGW 2 cut(s) 251, 535
BsaXI ACNNNNNCTCC 2 cut(s) 1065, 1095
Bsc4I CCNNNNNNNGG 5 cut(s) 251, 727, 898, 948, 1139
Bse1I ACTGG 1 cut(s) 761
Bse3DI GCAATG 1 cut(s) 1087
BseAI TCCGGA 2 cut(s) 251, 535
BseBI CCWGG 2 cut(s) 504, 524
BseCI ATCGAT 1 cut(s) 1013
BseDI CCNNGG 7 cut(s) 114, 263, 299, 419, 522, 573, 1031
BseGI GGATG 4 cut(s) 67, 226, 376, 817
BseLI CCNNNNNNNGG 5 cut(s) 251, 727, 898, 948, 1139
BseMI GCAATG 1 cut(s) 1087
BseMII CTCAG 3 cut(s) 690, 906, 1340
BseNI ACTGG 1 cut(s) 761
BseRI GAGGAG 5 cut(s) 809, 812, 815, 818, 1192
BseSI GKGCMC 1 cut(s) 886
BseXI GCAGC 3 cut(s) 344, 627, 917
BshFI GGCC 1 cut(s) 1147
BshVI ATCGAT 1 cut(s) 1013
BsiHKAI GWGCWC 1 cut(s) 502
BsiSI CCGG 3 cut(s) 116, 252, 536
BslFI GGGAC 2 cut(s) 401, 645
BslI CCNNNNNNNGG 5 cut(s) 251, 727, 898, 948, 1139
BsmAI GTCTC 3 cut(s) 387, 464, 1288
BsmFI GGGAC 2 cut(s) 401, 645
BsnI GGCC 1 cut(s) 1147
Bsp1286I GDGCHC 2 cut(s) 502, 886
Bsp13I TCCGGA 2 cut(s) 251, 535
Bsp143I GATC 4 cut(s) 149, 303, 1159, 1383
Bsp19I CCATGG 1 cut(s) 1031
BspACI CCGC 1 cut(s) 1092
BspANI GGCC 1 cut(s) 1147
BspCNI CTCAG 3 cut(s) 691, 907, 1339
BspDI ATCGAT 1 cut(s) 1013
BspEI TCCGGA 2 cut(s) 251, 535
BspLI GGNNCC 1 cut(s) 175
BspPI GGATC 1 cut(s) 311
BspQI GCTCTTC 1 cut(s) 84
BsrDI GCAATG 1 cut(s) 1087
BsrI ACTGG 1 cut(s) 761
BssECI CCNNGG 7 cut(s) 114, 263, 299, 419, 522, 573, 1031
BssMI GATC 4 cut(s) 149, 303, 1159, 1383
BssSI CACGAG 1 cut(s) 839
BssT1I CCWWGG 3 cut(s) 263, 419, 1031
Bst2BI CACGAG 1 cut(s) 839
Bst2UI CCWGG 2 cut(s) 504, 524
Bst4CI ACNGT 2 cut(s) 655, 825
Bst6I CTCTTC 1 cut(s) 84
BstC8I GCNNGC 1 cut(s) 846
BstDEI CTNAG 5 cut(s) 46, 402, 699, 915, 1326
BstDSI CCRYGG 2 cut(s) 573, 1031
BstEII GGTNACC 1 cut(s) 424
BstF5I GGATG 4 cut(s) 67, 226, 376, 817
BstKTI GATC 4 cut(s) 152, 306, 1162, 1386
BstMAI GTCTC 3 cut(s) 387, 464, 1288
BstMBI GATC 4 cut(s) 149, 303, 1159, 1383
BstMWI GCNNNNNNNGC 4 cut(s) 47, 911, 1250, 1331
BstNI CCWGG 2 cut(s) 504, 524
BstNSI RCATGY 1 cut(s) 1082
BstPI GGTNACC 1 cut(s) 424
BstSCI CCNGG 3 cut(s) 114, 502, 522
BstSFI CTRYAG 1 cut(s) 654
BstSLI GKGCMC 1 cut(s) 886
BstV1I GCAGC 3 cut(s) 344, 627, 917
BstX2I RGATCY 1 cut(s) 303
BstYI RGATCY 1 cut(s) 303
Bsu15I ATCGAT 1 cut(s) 1013
BsuRI GGCC 1 cut(s) 1147
BsuTUI ATCGAT 1 cut(s) 1013
BtgI CCRYGG 2 cut(s) 573, 1031
BtrI CACGTC 1 cut(s) 415
BtsCI GGATG 4 cut(s) 67, 226, 376, 817
BtsI GCAGTG 1 cut(s) 884
BtsIMutI CAGTG 2 cut(s) 830, 884
Cac8I GCNNGC 1 cut(s) 846
CaiI CAGNNNCTG 1 cut(s) 640
Cfr13I GGNCC 3 cut(s) 730, 740, 1340
ClaI ATCGAT 1 cut(s) 1013
Csp6I GTAC 3 cut(s) 21, 764, 1150
CspCI CAANNNNNGTGG 2 cut(s) 562, 597
CviAII CATG 2 cut(s) 1032, 1079
CviQI GTAC 3 cut(s) 21, 764, 1150
DdeI CTNAG 5 cut(s) 46, 402, 699, 915, 1326
DpnI GATC 4 cut(s) 151, 305, 1161, 1385
DpnII GATC 4 cut(s) 149, 303, 1159, 1383
DraI TTTAAA 1 cut(s) 1170
Eam1104I CTCTTC 1 cut(s) 84
EarI CTCTTC 1 cut(s) 84
Ecl136II GAGCTC 1 cut(s) 500
Eco130I CCWWGG 3 cut(s) 263, 419, 1031
Eco24I GRGCYC 1 cut(s) 502
Eco47I GGWCC 3 cut(s) 730, 740, 1340
Eco53kI GAGCTC 1 cut(s) 500
Eco57I CTGAAG 2 cut(s) 728, 1050
Eco91I GGTNACC 1 cut(s) 424
EcoICRI GAGCTC 1 cut(s) 500
EcoO65I GGTNACC 1 cut(s) 424
EcoRI GAATTC 2 cut(s) 539, 935
EcoRII CCWGG 2 cut(s) 502, 522
EcoT14I CCWWGG 3 cut(s) 263, 419, 1031
EcoT22I ATGCAT 2 cut(s) 376, 624
EcoT38I GRGCYC 1 cut(s) 502
ErhI CCWWGG 3 cut(s) 263, 419, 1031
FaeI CATG 2 cut(s) 1035, 1082
FaqI GGGAC 2 cut(s) 401, 645
FatI CATG 2 cut(s) 1031, 1078
FauNDI CATATG 1 cut(s) 547
FbaI TGATCA 1 cut(s) 1159
Fnu4HI GCNGC 3 cut(s) 358, 641, 906
FokI GGATG 4 cut(s) 54, 233, 383, 824
FriOI GRGCYC 1 cut(s) 502
Fsp4HI GCNGC 3 cut(s) 358, 641, 906
FspBI CTAG 4 cut(s) 18, 24, 147, 1122
GluI GCNGC 3 cut(s) 358, 641, 906
GsuI CTGGAG 2 cut(s) 411, 545
HaeIII GGCC 1 cut(s) 1147
HapII CCGG 3 cut(s) 116, 252, 536
Hin1II CATG 2 cut(s) 1035, 1082
HincII GTYRAC 1 cut(s) 667
HindII GTYRAC 1 cut(s) 667
HindIII AAGCTT 1 cut(s) 1371
HinfI GANTC 3 cut(s) 599, 717, 1308
HpaII CCGG 3 cut(s) 116, 252, 536
HphI GGTGA 3 cut(s) 121, 436, 1048
Hpy166II GTNNAC 4 cut(s) 129, 667, 821, 1039
Hpy188I TCNGA 4 cut(s) 303, 370, 565, 781
Hpy188III TCNNGA 8 cut(s) 147, 252, 469, 536, 968, 1328, 1361, 1395
Hpy8I GTNNAC 4 cut(s) 129, 667, 821, 1039
HpyAV CCTTC 4 cut(s) 142, 542, 802, 923
HpyCH4III ACNGT 2 cut(s) 655, 825
HpyCH4IV ACGT 2 cut(s) 213, 414
HpyCH4V TGCA 8 cut(s) 41, 124, 296, 374, 412, 622, 848, 1078
HpyF10VI GCNNNNNNNGC 4 cut(s) 47, 911, 1250, 1331
HpyF3I CTNAG 5 cut(s) 46, 402, 699, 915, 1326
HpySE526I ACGT 2 cut(s) 213, 414
Hsp92II CATG 2 cut(s) 1035, 1082
Kpn2I TCCGGA 2 cut(s) 251, 535
Ksp22I TGATCA 1 cut(s) 1159
Kzo9I GATC 4 cut(s) 149, 303, 1159, 1383
LguI GCTCTTC 1 cut(s) 84
LmnI GCTCC 4 cut(s) 164, 497, 505, 1241
Lsp1109I GCAGC 3 cut(s) 344, 627, 917
LweI GCATC 4 cut(s) 361, 569, 609, 857
MaeI CTAG 4 cut(s) 18, 24, 147, 1122
MaeII ACGT 2 cut(s) 213, 414
MaeIII GTNAC 5 cut(s) 424, 440, 694, 853, 1081
MalI GATC 4 cut(s) 151, 305, 1161, 1385
MboI GATC 4 cut(s) 149, 303, 1159, 1383
MboII GAAGA 5 cut(s) 71, 74, 127, 721, 1210
MfeI CAATTG 2 cut(s) 771, 1302
MflI RGATCY 1 cut(s) 303
MhlI GDGCHC 2 cut(s) 502, 886
MluCI AATT 7 cut(s) 480, 539, 771, 935, 1104, 1165, 1302
MlyI GAGTC 1 cut(s) 711
MmeI TCCRAC 4 cut(s) 201, 718, 810, 1076
Mph1103I ATGCAT 2 cut(s) 376, 624
MroI TCCGGA 2 cut(s) 251, 535
MseI TTAA 2 cut(s) 1169, 1314
MspI CCGG 3 cut(s) 116, 252, 536
MspR9I CCNGG 3 cut(s) 116, 504, 524
MunI CAATTG 2 cut(s) 771, 1302
MvaI CCWGG 2 cut(s) 504, 524
MwoI GCNNNNNNNGC 4 cut(s) 47, 911, 1250, 1331
NciI CCSGG 1 cut(s) 116
NcoI CCATGG 1 cut(s) 1031
NdeI CATATG 1 cut(s) 547
NdeII GATC 4 cut(s) 149, 303, 1159, 1383
NlaIII CATG 2 cut(s) 1035, 1082
NlaIV GGNNCC 1 cut(s) 175
NmuCI GTSAC 2 cut(s) 424, 440
NsiI ATGCAT 2 cut(s) 376, 624
NspI RCATGY 1 cut(s) 1082
PciSI GCTCTTC 1 cut(s) 84
PfeI GAWTC 2 cut(s) 599, 1308
PflMI CCANNNNNTGG 1 cut(s) 727
PfoI TCCNGGA 1 cut(s) 502
PkrI GCNGC 3 cut(s) 359, 642, 907
PleI GAGTC 1 cut(s) 711
PpsI GAGTC 1 cut(s) 711
Psp124BI GAGCTC 1 cut(s) 502
Psp6I CCWGG 2 cut(s) 502, 522
PspEI GGTNACC 1 cut(s) 424
PspGI CCWGG 2 cut(s) 502, 522
PspN4I GGNNCC 1 cut(s) 175
PspPI GGNCC 3 cut(s) 730, 740, 1340
PstNI CAGNNNCTG 1 cut(s) 640
PsuI RGATCY 1 cut(s) 303
RsaI GTAC 3 cut(s) 22, 765, 1151
RsaNI GTAC 3 cut(s) 21, 764, 1150
SacI GAGCTC 1 cut(s) 502
SapI GCTCTTC 1 cut(s) 84
SaqAI TTAA 2 cut(s) 1169, 1314
SatI GCNGC 3 cut(s) 358, 641, 906
Sau3AI GATC 4 cut(s) 149, 303, 1159, 1383
Sau96I GGNCC 3 cut(s) 730, 740, 1340
ScaI AGTACT 1 cut(s) 22
SchI GAGTC 1 cut(s) 711
ScrFI CCNGG 3 cut(s) 116, 504, 524
SduI GDGCHC 2 cut(s) 502, 886
SfaNI GCATC 4 cut(s) 361, 569, 609, 857
SfcI CTRYAG 1 cut(s) 654
SinI GGWCC 3 cut(s) 730, 740, 1340
SmiI ATTTAAAT 1 cut(s) 1170
SmlI CTYRAG 1 cut(s) 1359
SmoI CTYRAG 1 cut(s) 1359
SpeI ACTAGT 2 cut(s) 17, 23
Sse9I AATT 7 cut(s) 480, 539, 771, 935, 1104, 1165, 1302
SsiI CCGC 1 cut(s) 1092
SspMI CTAG 4 cut(s) 18, 24, 147, 1122
SstI GAGCTC 1 cut(s) 502
StyD4I CCNGG 3 cut(s) 114, 502, 522
StyI CCWWGG 3 cut(s) 263, 419, 1031
SwaI ATTTAAAT 1 cut(s) 1170
TaaI ACNGT 2 cut(s) 655, 825
TaiI ACGT 2 cut(s) 216, 417
TaqI TCGA 5 cut(s) 85, 468, 556, 993, 1013
TasI AATT 7 cut(s) 480, 539, 771, 935, 1104, 1165, 1302
TatI WGTACW 2 cut(s) 20, 763
TfiI GAWTC 2 cut(s) 599, 1308
Tru1I TTAA 2 cut(s) 1169, 1314
Tru9I TTAA 2 cut(s) 1169, 1314
TscAI CASTG 2 cut(s) 830, 891
TseFI GTSAC 2 cut(s) 424, 440
TseI GCWGC 3 cut(s) 357, 640, 905
Tsp45I GTSAC 2 cut(s) 424, 440
TspDTI ATGAA 3 cut(s) 274, 452, 504
TspGWI ACGGA 1 cut(s) 590
TspRI CASTG 2 cut(s) 830, 891
Van91I CCANNNNNTGG 1 cut(s) 727
VpaK11BI GGWCC 3 cut(s) 730, 740, 1340
XapI RAATTY 3 cut(s) 539, 935, 1165
XbaI TCTAGA 1 cut(s) 146
XceI RCATGY 1 cut(s) 1082
XspI CTAG 4 cut(s) 18, 24, 147, 1122
ZrmI AGTACT 1 cut(s) 22
Zsp2I ATGCAT 2 cut(s) 376, 624
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.