Prupe.1G407700_v2.0.a1

(S)-coclaurine N-methyltransferase-like

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp01
Physical Location & Seq
Forward (+)
35736003 .. 35738357
2355 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.1G407700.2

Sequence Viewer

Length: 1068 bp
ATGAACCGGATAATGCAACCAACGTACGATGCTACGGTCCGGTTCGCGCTATCTTCGCTGGAGCGAAATTTGCTACCGGATGCGGTTGTACGGAGGCTGACCCGCCTGCTCCTAGCAAGTCGTCTTCGATCCGGTTACAAGCCTACCTCTGAGCTCCAACTCTCTGACCTCCTCCAGTTCGTACAGTCTCTGAAGGAGATGCCCATAGCCATAAAGACTGATGACCCGAAAGCTCAACATTATGAAGTGCCCACATCTTTTTTCAAAATAGTGCTTGGAAAAAATCTCAAATACAGTTGTTATTACTTCACTGATGGGTCAAGCACCCTGGAGGAAGCTGAGAAGGCAATGCTGGAGCTTTACTGTGAAAGGTCACAGATCAAAAATGGTCACACTGTTCTTGATGTTGGGTGTGGCTGGGGATCTTTGTCTTTATACATTGCTCAGAAATATAGCAACTGTAAGGTTACAGGGATTTGCAATTCAACAACACAAAAGGCTTTCATAGAAGAGCAATGCCGGAATCTTCAGCTGCGGAATGTAGAGATCATAGTCGCAGATATCAGCACATTTGAGATGGAAGCATCCTATGACCGAATATTTTCTATCGAAATGTTCGAGCATATGAAGAACTACAAGGATCTTCTGAAGAAGATTTCCAGGTGGATGAAACAGGATGGCCTTCTGTTTGTTCATCATTTCTGCCACAAAGCATTTGCTTACCATTTTGAGGACAAAAATGAAGATGACTGGATTACTAGGTATTTCTTCAGTGGGGGCACAATGCCTTCAGCAAATCTACTGCTTTATTTCCAGGATGATGTTTCCATTGTCAATCATTGGCTTGTTAATGGGAAACACTATGCACAGACAAGTGAAGAGTGGCTTAAGAGAATGGACCAGAATGTGGCTTCCATAAAACCAATTATGGAGTCAACTTATGGAAAGGATTCGGCTGTGAAGTGGACCGTATATTGGAGAACATTCTTCATTTCCGTTGCAGAACTCTTTGGGTATAACAATGGAGAAGAGTGGATGGTTGCTCATTTCCTATTCAAGAAGAAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

356

Amino Acids

41.46

Weight (kDa)

7.61

Isoelectric Point (pI)

38.89

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

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Publication-ready

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 907
AccII CGCG 1 cut(s) 47
AciI CCGC 3 cut(s) 83, 103, 535
AclWI GGATC 3 cut(s) 123, 430, 648
AcsI RAATTY 1 cut(s) 67
AcuI CTGAAG 5 cut(s) 212, 512, 668, 754, 774
AfaI GTAC 3 cut(s) 26, 90, 183
AfiI CCNNNNNNNGG 3 cut(s) 730, 907, 975
AflII CTTAAG 1 cut(s) 887
AgsI TTSAA 3 cut(s) 265, 486, 1057
AjnI CCWGG 3 cut(s) 327, 659, 813
AluBI AGCT 5 cut(s) 154, 233, 338, 358, 532
AluI AGCT 5 cut(s) 154, 233, 338, 358, 532
Alw21I GWGCWC 1 cut(s) 156
Alw26I GTCTC 1 cut(s) 192
AlwI GGATC 3 cut(s) 123, 430, 648
AlwNI CAGNNNCTG 1 cut(s) 190
AoxI GGCC 1 cut(s) 679
ApeKI GCWGC 1 cut(s) 532
ApoI RAATTY 1 cut(s) 67
Asp700I GAANNNNTTC 2 cut(s) 601, 949
AspLEI GCGC 1 cut(s) 49
AspS9I GGNCC 3 cut(s) 37, 898, 966
AvaII GGWCC 3 cut(s) 37, 898, 966
BaeGI GKGCMC 2 cut(s) 252, 782
BanII GRGCYC 1 cut(s) 156
BbsI GAAGAC 1 cut(s) 116
Bbv12I GWGCWC 1 cut(s) 156
BbvI GCAGC 1 cut(s) 519
BccI CCATC 4 cut(s) 308, 571, 671, 1030
BciT130I CCWGG 3 cut(s) 329, 661, 815
BcoDI GTCTC 1 cut(s) 192
BfaI CTAG 2 cut(s) 113, 759
BfrI CTTAAG 1 cut(s) 887
BisI GCNGC 1 cut(s) 533
BlsI GCNGC 1 cut(s) 534
Bme1390I CCNGG 3 cut(s) 329, 661, 815
Bme18I GGWCC 3 cut(s) 37, 898, 966
BmgT120I GGNCC 3 cut(s) 37, 898, 966
BmrFI CCNGG 3 cut(s) 329, 661, 815
BmsI GCATC 4 cut(s) 19, 70, 189, 593
BpiI GAAGAC 1 cut(s) 116
BpmI CTGGAG 4 cut(s) 80, 158, 350, 374
BsaJI CCNNGG 1 cut(s) 327
BsaWI WCCGGW 4 cut(s) 6, 39, 76, 131
Bsc4I CCNNNNNNNGG 3 cut(s) 730, 907, 975
Bse1I ACTGG 2 cut(s) 175, 755
Bse3DI GCAATG 3 cut(s) 354, 438, 521
BseBI CCWGG 3 cut(s) 329, 661, 815
BseDI CCNNGG 1 cut(s) 327
BseGI GGATG 6 cut(s) 85, 584, 672, 682, 823, 1041
BseLI CCNNNNNNNGG 3 cut(s) 730, 907, 975
BseMI GCAATG 3 cut(s) 354, 438, 521
BseMII CTCAG 3 cut(s) 141, 330, 458
BseNI ACTGG 2 cut(s) 175, 755
BseRI GAGGAG 1 cut(s) 161
BseSI GKGCMC 2 cut(s) 252, 782
BseXI GCAGC 1 cut(s) 519
BseYI CCCAGC 1 cut(s) 417
Bsh1236I CGCG 1 cut(s) 47
BshFI GGCC 1 cut(s) 681
BsiHKAI GWGCWC 1 cut(s) 156
BsiSI CCGG 5 cut(s) 7, 40, 77, 132, 520
BsiWI CGTACG 1 cut(s) 24
BslI CCNNNNNNNGG 3 cut(s) 730, 907, 975
BsmAI GTCTC 1 cut(s) 192
BsnI GGCC 1 cut(s) 681
Bsp1286I GDGCHC 3 cut(s) 156, 252, 782
Bsp143I GATC 5 cut(s) 128, 378, 422, 546, 640
BspACI CCGC 3 cut(s) 83, 103, 535
BspANI GGCC 1 cut(s) 681
BspCNI CTCAG 3 cut(s) 142, 331, 457
BspFNI CGCG 1 cut(s) 47
BspPI GGATC 3 cut(s) 123, 430, 648
BspQI GCTCTTC 1 cut(s) 504
BspTI CTTAAG 1 cut(s) 887
BsrDI GCAATG 3 cut(s) 354, 438, 521
BsrI ACTGG 2 cut(s) 175, 755
BssECI CCNNGG 1 cut(s) 327
BssMI GATC 5 cut(s) 128, 378, 422, 546, 640
Bst2UI CCWGG 3 cut(s) 329, 661, 815
Bst4CI ACNGT 7 cut(s) 37, 186, 296, 365, 397, 461, 970
Bst6I CTCTTC 3 cut(s) 504, 873, 1023
BstAFI CTTAAG 1 cut(s) 887
BstC8I GCNNGC 1 cut(s) 107
BstDEI CTNAG 3 cut(s) 150, 339, 444
BstF5I GGATG 6 cut(s) 85, 584, 672, 682, 823, 1041
BstFNI CGCG 1 cut(s) 47
BstHHI GCGC 1 cut(s) 49
BstKTI GATC 5 cut(s) 131, 381, 425, 549, 643
BstMAI GTCTC 1 cut(s) 192
BstMBI GATC 5 cut(s) 128, 378, 422, 546, 640
BstMWI GCNNNNNNNGC 3 cut(s) 55, 70, 344
BstNI CCWGG 3 cut(s) 329, 661, 815
BstSCI CCNGG 3 cut(s) 327, 659, 813
BstSLI GKGCMC 2 cut(s) 252, 782
BstUI CGCG 1 cut(s) 47
BstV1I GCAGC 1 cut(s) 519
BstV2I GAAGAC 1 cut(s) 116
BstX2I RGATCY 2 cut(s) 422, 640
BstYI RGATCY 2 cut(s) 422, 640
BsuRI GGCC 1 cut(s) 681
BtsCI GGATG 6 cut(s) 85, 584, 672, 682, 823, 1041
BtsIMutI CAGTG 3 cut(s) 309, 393, 778
Cac8I GCNNGC 1 cut(s) 107
CaiI CAGNNNCTG 1 cut(s) 190
CfoI GCGC 1 cut(s) 49
Cfr13I GGNCC 3 cut(s) 37, 898, 966
CpoI CGGWCCG 1 cut(s) 37
Csp6I GTAC 3 cut(s) 25, 89, 182
CspI CGGWCCG 1 cut(s) 37
CviQI GTAC 3 cut(s) 25, 89, 182
DdeI CTNAG 3 cut(s) 150, 339, 444
DpnI GATC 5 cut(s) 130, 380, 424, 548, 642
DpnII GATC 5 cut(s) 128, 378, 422, 546, 640
Eam1104I CTCTTC 3 cut(s) 504, 873, 1023
EarI CTCTTC 3 cut(s) 504, 873, 1023
Ecl136II GAGCTC 1 cut(s) 154
Eco24I GRGCYC 1 cut(s) 156
Eco32I GATATC 1 cut(s) 562
Eco47I GGWCC 3 cut(s) 37, 898, 966
Eco53kI GAGCTC 1 cut(s) 154
Eco57I CTGAAG 5 cut(s) 212, 512, 668, 754, 774
EcoICRI GAGCTC 1 cut(s) 154
EcoRII CCWGG 3 cut(s) 327, 659, 813
EcoRV GATATC 1 cut(s) 562
EcoT38I GRGCYC 1 cut(s) 156
FalI AAGNNNNNCTT 2 cut(s) 870, 902
FauI CCCGC 1 cut(s) 110
FauNDI CATATG 1 cut(s) 624
Fnu4HI GCNGC 1 cut(s) 533
FokI GGATG 6 cut(s) 92, 571, 679, 689, 830, 1048
FriOI GRGCYC 1 cut(s) 156
Fsp4HI GCNGC 1 cut(s) 533
FspBI CTAG 2 cut(s) 113, 759
GlaI GCGC 1 cut(s) 48
GluI GCNGC 1 cut(s) 533
GsaI CCCAGC 1 cut(s) 421
GsuI CTGGAG 4 cut(s) 80, 158, 350, 374
HaeIII GGCC 1 cut(s) 681
HapII CCGG 5 cut(s) 7, 40, 77, 132, 520
HhaI GCGC 1 cut(s) 49
Hin6I GCGC 1 cut(s) 47
HinP1I GCGC 1 cut(s) 47
HincII GTYRAC 1 cut(s) 936
HindII GTYRAC 1 cut(s) 936
HinfI GANTC 3 cut(s) 523, 932, 950
HpaII CCGG 5 cut(s) 7, 40, 77, 132, 520
Hpy166II GTNNAC 2 cut(s) 936, 966
Hpy188I TCNGA 5 cut(s) 151, 166, 192, 447, 648
Hpy188III TCNNGA 2 cut(s) 401, 1057
Hpy8I GTNNAC 2 cut(s) 936, 966
HpyAV CCTTC 4 cut(s) 187, 337, 692, 798
HpyCH4III ACNGT 7 cut(s) 37, 186, 296, 365, 397, 461, 970
HpyCH4IV ACGT 1 cut(s) 23
HpyCH4V TGCA 4 cut(s) 16, 480, 866, 1001
HpyF10VI GCNNNNNNNGC 3 cut(s) 55, 70, 344
HpyF3I CTNAG 3 cut(s) 150, 339, 444
HpySE526I ACGT 1 cut(s) 23
HspAI GCGC 1 cut(s) 47
Kzo9I GATC 5 cut(s) 128, 378, 422, 546, 640
LguI GCTCTTC 1 cut(s) 504
LmnI GCTCC 4 cut(s) 61, 114, 159, 355
Lsp1109I GCAGC 1 cut(s) 519
LweI GCATC 4 cut(s) 19, 70, 189, 593
MaeI CTAG 2 cut(s) 113, 759
MaeII ACGT 1 cut(s) 23
MaeIII GTNAC 4 cut(s) 134, 372, 389, 466
MalI GATC 5 cut(s) 130, 380, 424, 548, 642
MboI GATC 5 cut(s) 128, 378, 422, 546, 640
MflI RGATCY 2 cut(s) 422, 640
MhlI GDGCHC 3 cut(s) 156, 252, 782
MluCI AATT 3 cut(s) 67, 481, 924
MlyI GAGTC 1 cut(s) 941
MmeI TCCRAC 1 cut(s) 181
MnlI CCTC 6 cut(s) 87, 157, 179, 182, 325, 724
MroXI GAANNNNTTC 2 cut(s) 601, 949
MseI TTAA 2 cut(s) 849, 888
MspA1I CMGCKG 1 cut(s) 532
MspCI CTTAAG 1 cut(s) 887
MspI CCGG 5 cut(s) 7, 40, 77, 132, 520
MspR9I CCNGG 3 cut(s) 329, 661, 815
MvaI CCWGG 3 cut(s) 329, 661, 815
MvnI CGCG 1 cut(s) 47
MwoI GCNNNNNNNGC 3 cut(s) 55, 70, 344
NdeI CATATG 1 cut(s) 624
NdeII GATC 5 cut(s) 128, 378, 422, 546, 640
NmuCI GTSAC 2 cut(s) 372, 389
PciSI GCTCTTC 1 cut(s) 504
PcsI WCGNNNNNNNCGW 1 cut(s) 615
PdmI GAANNNNTTC 2 cut(s) 601, 949
PfeI GAWTC 2 cut(s) 523, 950
Pfl23II CGTACG 1 cut(s) 24
PflMI CCANNNNNTGG 1 cut(s) 907
PfoI TCCNGGA 1 cut(s) 813
PkrI GCNGC 1 cut(s) 534
PleI GAGTC 1 cut(s) 940
PpsI GAGTC 1 cut(s) 940
Psp124BI GAGCTC 1 cut(s) 156
Psp6I CCWGG 3 cut(s) 327, 659, 813
PspFI CCCAGC 1 cut(s) 417
PspGI CCWGG 3 cut(s) 327, 659, 813
PspLI CGTACG 1 cut(s) 24
PspPI GGNCC 3 cut(s) 37, 898, 966
PstNI CAGNNNCTG 1 cut(s) 190
PsuI RGATCY 2 cut(s) 422, 640
PvuII CAGCTG 1 cut(s) 532
RsaI GTAC 3 cut(s) 26, 90, 183
RsaNI GTAC 3 cut(s) 25, 89, 182
Rsr2I CGGWCCG 1 cut(s) 37
RsrII CGGWCCG 1 cut(s) 37
SacI GAGCTC 1 cut(s) 156
SapI GCTCTTC 1 cut(s) 504
SaqAI TTAA 2 cut(s) 849, 888
SatI GCNGC 1 cut(s) 533
Sau3AI GATC 5 cut(s) 128, 378, 422, 546, 640
Sau96I GGNCC 3 cut(s) 37, 898, 966
SchI GAGTC 1 cut(s) 941
ScrFI CCNGG 3 cut(s) 329, 661, 815
SduI GDGCHC 3 cut(s) 156, 252, 782
SfaNI GCATC 4 cut(s) 19, 70, 189, 593
SinI GGWCC 3 cut(s) 37, 898, 966
SmlI CTYRAG 1 cut(s) 887
SmoI CTYRAG 1 cut(s) 887
Sse9I AATT 3 cut(s) 67, 481, 924
SsiI CCGC 3 cut(s) 83, 103, 535
SspI AATATT 1 cut(s) 600
SspMI CTAG 2 cut(s) 113, 759
SstI GAGCTC 1 cut(s) 156
StyD4I CCNGG 3 cut(s) 327, 659, 813
TaaI ACNGT 7 cut(s) 37, 186, 296, 365, 397, 461, 970
TaiI ACGT 1 cut(s) 26
TaqI TCGA 3 cut(s) 127, 609, 618
TaqII GACCGA 1 cut(s) 609
TasI AATT 3 cut(s) 67, 481, 924
TfiI GAWTC 2 cut(s) 523, 950
Tru1I TTAA 2 cut(s) 849, 888
Tru9I TTAA 2 cut(s) 849, 888
TscAI CASTG 3 cut(s) 316, 400, 778
TseFI GTSAC 2 cut(s) 372, 389
TseI GCWGC 1 cut(s) 532
Tsp45I GTSAC 2 cut(s) 372, 389
TspDTI ATGAA 8 cut(s) 17, 258, 493, 641, 683, 683, 756, 979
TspGWI ACGGA 2 cut(s) 106, 985
TspRI CASTG 3 cut(s) 316, 400, 778
Van91I CCANNNNNTGG 1 cut(s) 907
Vha464I CTTAAG 1 cut(s) 887
VpaK11BI GGWCC 3 cut(s) 37, 898, 966
XapI RAATTY 1 cut(s) 67
XmnI GAANNNNTTC 2 cut(s) 601, 949
XspI CTAG 2 cut(s) 113, 759
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.