No description available
Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.
| Species | Orthologous Gene IDs |
|---|---|
| fragaria_vesca | FvH4_1g23711 |
| prunus_persica | Prupe.1G407700_v2.0.a1 Prupe.3G281700_v2.0.a1 |
| pyrus_communis | pycom08g05620 pycom17g03380 |
| rosa_chinensis | RchiOBHm_Chr2g0170881 RchiOBHm_Chr6g0289031 RchiOBHm_Chr7g0222271 |
| rosa_laevigata | RLG00000001172 RLG00000008907 RLG00000008913 RLG00000014117 RLG00000014203 RLG00000014204 RLG00000021990 RLG00000023949 RLG00000024929 RLG00000034655 |
| rosa_multiflora | Rmu_sc0000220.1_g000012 Rmu_sc0003110.1_g000018 Rmu_sc0003395.1_g000004 Rmu_sc0011277.1_g000007 Rmu_sc0011582.1_g000018 |
| rosa_roxburghii | Rroxscaffold_3G00237240 |
| rosa_rugosa | Rorug02G0497700 Rorug02G0552100 Rorug05G0351900 |
| rosa_samantha | Rh1BG311600 Rh1CG326800 Rh2AG624800 Rh2BG635500 Rh2CG472000 Rh2CG604200 Rh2DG647100 Rh3BG187400 Rh3BG187500 Rh3DG188300 Rh5AG461800 Rh5BG373200 Rh5BG373300 Rh5BG480000 Rh5CG377900 Rh5CG395000 Rh5CG504200 Rh6AG138900 Rh6BG513600 Rh7AG348400 Rh7AG474700 Rh7CG182200 Rh7CG366000 |
| rosa_wichuraiana | Rw3G015310 Rw5G034010 Rw7G036470 |
| Enzyme | Recognition Site | Cut Count | Positions (bp) |
|---|---|---|---|
| Acc65I | GGTACC | 1 cut(s) | 82 |
| AccB1I | GGYRCC | 1 cut(s) | 82 |
| AfaI | GTAC | 1 cut(s) | 84 |
| AgsI | TTSAA | 1 cut(s) | 142 |
| Alw26I | GTCTC | 1 cut(s) | 163 |
| Asp718I | GGTACC | 1 cut(s) | 82 |
| AspLEI | GCGC | 1 cut(s) | 120 |
| AsuC2I | CCSGG | 1 cut(s) | 95 |
| AsuHPI | GGTGA | 1 cut(s) | 195 |
| BanI | GGYRCC | 1 cut(s) | 82 |
| BccI | CCATC | 1 cut(s) | 47 |
| BcnI | CCSGG | 1 cut(s) | 95 |
| BcoDI | GTCTC | 1 cut(s) | 163 |
| Bme1390I | CCNGG | 1 cut(s) | 95 |
| BmiI | GGNNCC | 1 cut(s) | 84 |
| BmrFI | CCNGG | 1 cut(s) | 95 |
| BpuMI | CCSGG | 1 cut(s) | 95 |
| BsaI | GGTCTC | 1 cut(s) | 163 |
| BsaXI | ACNNNNNCTCC | 2 cut(s) | 12, 42 |
| BseGI | GGATG | 1 cut(s) | 129 |
| BshNI | GGYRCC | 1 cut(s) | 82 |
| BsiSI | CCGG | 1 cut(s) | 95 |
| BsmAI | GTCTC | 1 cut(s) | 163 |
| Bso31I | GGTCTC | 1 cut(s) | 163 |
| BspLI | GGNNCC | 1 cut(s) | 84 |
| BspT107I | GGYRCC | 1 cut(s) | 82 |
| BspTNI | GGTCTC | 1 cut(s) | 163 |
| Bst4CI | ACNGT | 1 cut(s) | 157 |
| BstF5I | GGATG | 1 cut(s) | 129 |
| BstHHI | GCGC | 1 cut(s) | 120 |
| BstMAI | GTCTC | 1 cut(s) | 163 |
| BstSCI | CCNGG | 1 cut(s) | 93 |
| BtsCI | GGATG | 1 cut(s) | 129 |
| CfoI | GCGC | 1 cut(s) | 120 |
| Csp6I | GTAC | 1 cut(s) | 83 |
| CviAII | CATG | 1 cut(s) | 112 |
| CviJI | RGCY | 4 cut(s) | 76, 93, 131, 196 |
| CviKI_1 | RGCY | 4 cut(s) | 76, 93, 131, 196 |
| CviQI | GTAC | 1 cut(s) | 83 |
| Eco31I | GGTCTC | 1 cut(s) | 163 |
| FaeI | CATG | 1 cut(s) | 115 |
| FaiI | YATR | 1 cut(s) | 113 |
| FalI | AAGNNNNNCTT | 2 cut(s) | 181, 213 |
| FatI | CATG | 1 cut(s) | 111 |
| FokI | GGATG | 1 cut(s) | 136 |
| GlaI | GCGC | 1 cut(s) | 119 |
| HapII | CCGG | 1 cut(s) | 95 |
| HhaI | GCGC | 1 cut(s) | 120 |
| Hin1II | CATG | 1 cut(s) | 115 |
| Hin6I | GCGC | 1 cut(s) | 118 |
| HinP1I | GCGC | 1 cut(s) | 118 |
| HincII | GTYRAC | 1 cut(s) | 153 |
| HindII | GTYRAC | 1 cut(s) | 153 |
| HinfI | GANTC | 2 cut(s) | 32, 98 |
| HpaII | CCGG | 1 cut(s) | 95 |
| HphI | GGTGA | 1 cut(s) | 195 |
| Hpy166II | GTNNAC | 1 cut(s) | 153 |
| Hpy188I | TCNGA | 2 cut(s) | 52, 106 |
| Hpy8I | GTNNAC | 1 cut(s) | 153 |
| HpyAV | CCTTC | 4 cut(s) | 6, 121, 148, 207 |
| HpyCH4III | ACNGT | 1 cut(s) | 157 |
| HpyCH4V | TGCA | 1 cut(s) | 178 |
| Hsp92II | CATG | 1 cut(s) | 115 |
| HspAI | GCGC | 1 cut(s) | 118 |
| KpnI | GGTACC | 1 cut(s) | 86 |
| LpnPI | CCDG | 4 cut(s) | 21, 65, 106, 108 |
| MboII | GAAGA | 2 cut(s) | 16, 93 |
| MluCI | AATT | 3 cut(s) | 87, 142, 179 |
| MnlI | CCTC | 2 cut(s) | 87, 178 |
| MspI | CCGG | 1 cut(s) | 95 |
| MspR9I | CCNGG | 1 cut(s) | 95 |
| NciI | CCSGG | 1 cut(s) | 95 |
| NlaIII | CATG | 1 cut(s) | 115 |
| NlaIV | GGNNCC | 1 cut(s) | 84 |
| PfeI | GAWTC | 2 cut(s) | 32, 98 |
| PspN4I | GGNNCC | 1 cut(s) | 84 |
| RsaI | GTAC | 1 cut(s) | 84 |
| RsaNI | GTAC | 1 cut(s) | 83 |
| ScrFI | CCNGG | 1 cut(s) | 95 |
| SetI | ASST | 3 cut(s) | 17, 189, 208 |
| SgeI | CNNG | 6 cut(s) | 48, 92, 106, 107, 124, 133 |
| Sse9I | AATT | 3 cut(s) | 87, 142, 179 |
| StyD4I | CCNGG | 1 cut(s) | 93 |
| TaaI | ACNGT | 1 cut(s) | 157 |
| TasI | AATT | 3 cut(s) | 87, 142, 179 |
| TfiI | GAWTC | 2 cut(s) | 32, 98 |
| TspDTI | ATGAA | 4 cut(s) | 17, 128, 140, 189 |