Basic Information

Type: gene

Biological Identity

Species

prunus_persica

Chromosome

Pp07

Orthogroup ID

OG0001140

Physical Location & Seq

Genomic Coordinates Forward (+)

13958790 .. 13962119

Gene Structure 3330 bp

Loading structure...

UTR

Exon/CDS

Intron

Transcript / Protein ID

Prupe.7G114000.3

Sequence Viewer

CDS Protein Promoter (2k)

Length: 1092 bp

ATGGAAATAACTCAAACCCTCCTCCTCCTCCCAACTCTCTGTCTCTTCTTCCTCCTCTCAGGGCAACAAGGTTTGCTAGTTTCAGCTGCTCACCACCTCCACCGCCACCACCACACACACCGCCACCTGTTTGATTGGCAGCCCACAAAGCTCTTTGTTTTTGGAGATTCATATTCTGACACAGGAAACAACAGAAAATCAGTGGCAAGTTCTTGGAAATATCCGTACGGAATCACATTCCCAGGCAAACCCAGTGGCCGTTTCTCCGATGGCCGCGTCCTCACTGATTTCCTTGCAAAGTTCATAGGTGTGAAGTCTCCACTACCATACAGATTTAGAAAAATCGGGGTCCAACATTTGAAACATGGAGTGAATTTTGCACATGGAGGCACAGGTGTGTTTAAGACCTTGGTTTTGGATCCTAACATGACAACCCAGATTGACTTCTTCCAGAACCTCATAAAAAATGACTCTGTCTTCACCCCCAAGGATCTCCACTTCTCCGTGGCCCTCGTCACAGTTTCCGGCAATGACTATGCAACTTATGTCGCCACAAATGGCTCTGTTCAGGGTTGGCAACCCTTCATCACATCAGTAGTAAATCAATTGACTGTGAACTTGAAACGTATATATGACTTGGGAGTGAACAAAATAGTTGTCATAGCTCTTGAACCTCTGGGATGTCTCCCTCGGAGCACAGCCGAATTTTCTTTCCAAAAGTGCAATGGAACGGCGAACGCCCTAGTCGGTTTCCACAACCTCTTGTTGCAGCAAGCTGTGGCCAAGTTGAACAACGAAACCAACTCTTCTTCTTTCCTCATTCTCGATCTTTATACCTCCTTCACATCTGTGTTCAAGAACAAAGGCGACCTAGGAAGCATAAAGTTTGAGAACCCTTTGAGGCCATGTTGTGTTGGTGTAAGCAGTGGATATTATTGTGGGAGTCTGGATGCAAATGGCGCAAAGAAATATACCATTTGTCAAAACCCTGAATCTACATTCTTTTGGGACGATTCTCACCCTACCCAGCAGGGCTGGCGCGCTGTGTATTCTACTTTGCGATCCACACTTGAAGAGCTCTATACTAATTAA

Functional Annotation

Gene Ontology

Molecular Function
Biological Process
Cellular Component

No ontology terms assigned.

KEGG Pathways

Metabolic & Signaling

No pathways identified.

Pfam Domains

Protein Families

Lipase_GDSL

Protein Analysis

364

Amino Acids

40.48

Weight (kDa)

9.05

Isoelectric Point (pI)

22.8

Instability Index

Protein Domains (Pfam)

No Pfam domains detected for this protein.

Hydrophobicity Profile (Kyte-Doolittle)

AI Structure Prediction Report

Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter

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Align Labels (Cladogram)

Image

Tree File

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Publication-ready

iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0001140)

Species	Orthologous Gene IDs
arabidopsis_thaliana	AT3G09930 AT3G09930 AT5G03610
fragaria_vesca	FvH4_6g18290 FvH4_6g18330 FvH4_7g05761 FvH4_7g05772
malus_domestica	MD02G1255500.v1.1 MD07G1066000.v1.1 MD12G1022800.v1.1 MD14G1019600.v1.1
prunus_persica	Prupe.2G080100_v2.0.a1 Prupe.2G080200_v2.0.a1 Prupe.2G080500_v2.0.a1 Prupe.2G080800_v2.0.a1 Prupe.2G081000_v2.0.a1 Prupe.7G114000_v2.0.a1 Prupe.7G114000_v2.0.a1 Prupe.7G114000_v2.0.a1
pyrus_communis	pycom02g21640 pycom07g05060 pycom12g02120 pycom14g01920
rosa_chinensis	RchiOBHm_Chr1g0332821 RchiOBHm_Chr1g0332841 RchiOBHm_Chr3g0472731 RchiOBHm_Chr3g0472801
rosa_laevigata	RLG00000024059 RLG00000029642
rosa_multiflora	Rmu_co8306661.1_g000001 Rmu_sc0000408.1_g000018 Rmu_sc0001786.1_g000003 Rmu_sc0005519.1_g000002 Rmu_sc0005608.1_g000010 Rmu_ssc0000025.1_g000001
rosa_roxburghii	Rroxscaffold_4G00317950 Rroxscaffold_6G00408630
rosa_rugosa	Rorug01G0103200 Rorug01G0103300 Rorug03G0127600 Rorug03G0127700
rosa_samantha	Rh1AG128500 Rh1BG097900 Rh1CG122300 Rh1DG134100 Rh3AG180100 Rh3AG180600 Rh3BG206200 Rh3BG206800 Rh3CG203200 Rh3CG204000 Rh3CG221600 Rh3CG222400 Rh3DG169100 Rh3DG169500
rosa_wichuraiana	Rw0G004970 Rw1G010490 Rw3G016240

Restriction Enzyme Sites

1 / 10

Enzyme	Recognition Site	Cut Count	Positions (bp)
AccII	CGCG	2 cut(s)	276, 1041
AciI	CCGC	3 cut(s)	103, 121, 274
AclWI	GGATC	4 cut(s)	413, 426, 498, 1056
AcoI	YGGCCR	3 cut(s)	256, 271, 780
AcsI	RAATTY	2 cut(s)	373, 704
AfaI	GTAC	1 cut(s)	227
AgsI	TTSAA	6 cut(s)	361, 622, 671, 790, 856, 1073
AjnI	CCWGG	1 cut(s)	241
AleI	CACNNNNGTG	2 cut(s)	395, 848
AluBI	AGCT	5 cut(s)	86, 151, 665, 776, 1078
AluI	AGCT	5 cut(s)	86, 151, 665, 776, 1078
Alw21I	GWGCWC	2 cut(s)	698, 1080
Alw26I	GTCTC	3 cut(s)	47, 321, 689
AlwI	GGATC	4 cut(s)	413, 426, 498, 1056
AoxI	GGCC	5 cut(s)	256, 271, 507, 780, 902
ApeKI	GCWGC	3 cut(s)	86, 139, 769
ApoI	RAATTY	2 cut(s)	373, 704
ArsI	GACNNNNNNTTYG	4 cut(s)	397, 429, 642, 674
AspA2I	CCTAGG	1 cut(s)	871
AspLEI	GCGC	3 cut(s)	962, 1041, 1043
AspS9I	GGNCC	2 cut(s)	349, 508
AsuHPI	GGTGA	3 cut(s)	83, 472, 1010
AvaII	GGWCC	1 cut(s)	349
AvrII	CCTAGG	1 cut(s)	871
BalI	TGGCCA	1 cut(s)	782
BamHI	GGATCC	1 cut(s)	418
BanII	GRGCYC	1 cut(s)	1080
BbsI	GAAGAC	1 cut(s)	469
Bbv12I	GWGCWC	2 cut(s)	698, 1080
BbvI	GCAGC	3 cut(s)	73, 151, 781
BccI	CCATC	1 cut(s)	263
BceAI	ACGGC	2 cut(s)	243, 747
BciT130I	CCWGG	1 cut(s)	243
BcoDI	GTCTC	3 cut(s)	47, 321, 689
BfaI	CTAG	3 cut(s)	77, 743, 872
BisI	GCNGC	4 cut(s)	87, 140, 274, 770
BlnI	CCTAGG	1 cut(s)	871
BlsI	GCNGC	4 cut(s)	88, 141, 275, 771
Bme1390I	CCNGG	1 cut(s)	243
Bme18I	GGWCC	1 cut(s)	349
BmgT120I	GGNCC	2 cut(s)	349, 508
BmiI	GGNNCC	2 cut(s)	350, 420
BmrFI	CCNGG	1 cut(s)	243
BmrI	ACTGGG	1 cut(s)	246
BmsI	GCATC	1 cut(s)	940
BmuI	ACTGGG	1 cut(s)	246
BpiI	GAAGAC	1 cut(s)	469
BsaJI	CCNNGG	6 cut(s)	241, 408, 486, 504, 689, 871
Bse1I	ACTGG	1 cut(s)	252
Bse3DI	GCAATG	2 cut(s)	535, 730
BseBI	CCWGG	1 cut(s)	243
BseDI	CCNNGG	6 cut(s)	241, 408, 486, 504, 689, 871
BseGI	GGATG	2 cut(s)	686, 955
BseMI	GCAATG	2 cut(s)	535, 730
BseMII	CTCAG	1 cut(s)	72
BseNI	ACTGG	1 cut(s)	252
BsePI	GCGCGC	1 cut(s)	1039
BseRI	GAGGAG	4 cut(s)	11, 14, 17, 44
BseXI	GCAGC	3 cut(s)	73, 151, 781
BseYI	CCCAGC	1 cut(s)	1026
Bsh1236I	CGCG	2 cut(s)	276, 1041
BshFI	GGCC	5 cut(s)	258, 273, 509, 782, 904
BsiHKAI	GWGCWC	2 cut(s)	698, 1080
BsiSI	CCGG	1 cut(s)	525
BsiWI	CGTACG	1 cut(s)	225
BslFI	GGGAC	1 cut(s)	1022
BsmAI	GTCTC	3 cut(s)	47, 321, 689
BsmFI	GGGAC	1 cut(s)	1022
BsnI	GGCC	5 cut(s)	258, 273, 509, 782, 904
Bsp1286I	GDGCHC	2 cut(s)	698, 1080
Bsp143I	GATC	4 cut(s)	418, 490, 826, 1061
BspACI	CCGC	3 cut(s)	103, 121, 274
BspANI	GGCC	5 cut(s)	258, 273, 509, 782, 904
BspCNI	CTCAG	1 cut(s)	71
BspFNI	CGCG	2 cut(s)	276, 1041
BspLI	GGNNCC	2 cut(s)	350, 420
BspPI	GGATC	4 cut(s)	413, 426, 498, 1056
BspQI	GCTCTTC	1 cut(s)	1068
BsrDI	GCAATG	2 cut(s)	535, 730
BsrI	ACTGG	1 cut(s)	252
BssECI	CCNNGG	6 cut(s)	241, 408, 486, 504, 689, 871
BssHII	GCGCGC	1 cut(s)	1039
BssMI	GATC	4 cut(s)	418, 490, 826, 1061
BssT1I	CCWWGG	3 cut(s)	408, 486, 871
Bst2UI	CCWGG	1 cut(s)	243
Bst4CI	ACNGT	2 cut(s)	520, 613
Bst6I	CTCTTC	3 cut(s)	50, 811, 1068
BstC8I	GCNNGC	3 cut(s)	774, 1037, 1041
BstDEI	CTNAG	1 cut(s)	58
BstDSI	CCRYGG	1 cut(s)	504
BstF5I	GGATG	2 cut(s)	686, 955
BstFNI	CGCG	2 cut(s)	276, 1041
BstHHI	GCGC	3 cut(s)	962, 1041, 1043
BstKTI	GATC	4 cut(s)	421, 493, 829, 1064
BstMAI	GTCTC	3 cut(s)	47, 321, 689
BstMBI	GATC	4 cut(s)	418, 490, 826, 1061
BstMWI	GCNNNNNNNGC	3 cut(s)	148, 959, 1036
BstNI	CCWGG	1 cut(s)	243
BstSCI	CCNGG	1 cut(s)	241
BstUI	CGCG	2 cut(s)	276, 1041
BstV1I	GCAGC	3 cut(s)	73, 151, 781
BstV2I	GAAGAC	1 cut(s)	469
BstX2I	RGATCY	2 cut(s)	418, 490
BstYI	RGATCY	2 cut(s)	418, 490
BsuRI	GGCC	5 cut(s)	258, 273, 509, 782, 904
BtgI	CCRYGG	1 cut(s)	504
BtsCI	GGATG	2 cut(s)	686, 955
BtsI	GCAGTG	1 cut(s)	931
BtsIMutI	CAGTG	4 cut(s)	207, 259, 282, 931
Cac8I	GCNNGC	3 cut(s)	774, 1037, 1041
CfoI	GCGC	3 cut(s)	962, 1041, 1043
Cfr13I	GGNCC	2 cut(s)	349, 508
CseI	GACGC	1 cut(s)	265
Csp6I	GTAC	1 cut(s)	226
CspCI	CAANNNNNGTGG	2 cut(s)	235, 270
CviAII	CATG	4 cut(s)	365, 383, 427, 906
CviQI	GTAC	1 cut(s)	226
DdeI	CTNAG	1 cut(s)	58
DpnI	GATC	4 cut(s)	420, 492, 828, 1063
DpnII	GATC	4 cut(s)	418, 490, 826, 1061
EaeI	YGGCCR	3 cut(s)	256, 271, 780
Eam1104I	CTCTTC	3 cut(s)	50, 811, 1068
EarI	CTCTTC	3 cut(s)	50, 811, 1068
Ecl136II	GAGCTC	1 cut(s)	1078
Eco130I	CCWWGG	3 cut(s)	408, 486, 871
Eco24I	GRGCYC	1 cut(s)	1080
Eco47I	GGWCC	1 cut(s)	349
Eco53kI	GAGCTC	1 cut(s)	1078
EcoICRI	GAGCTC	1 cut(s)	1078
EcoRII	CCWGG	1 cut(s)	241
EcoT14I	CCWWGG	3 cut(s)	408, 486, 871
EcoT38I	GRGCYC	1 cut(s)	1080
ErhI	CCWWGG	3 cut(s)	408, 486, 871
FaeI	CATG	4 cut(s)	368, 386, 430, 909
FaqI	GGGAC	1 cut(s)	1022
FatI	CATG	4 cut(s)	364, 382, 426, 905
Fnu4HI	GCNGC	4 cut(s)	87, 140, 274, 770
FokI	GGATG	2 cut(s)	693, 962
FriOI	GRGCYC	1 cut(s)	1080
Fsp4HI	GCNGC	4 cut(s)	87, 140, 274, 770
FspBI	CTAG	3 cut(s)	77, 743, 872
GlaI	GCGC	3 cut(s)	961, 1040, 1042
GluI	GCNGC	4 cut(s)	87, 140, 274, 770
GsaI	CCCAGC	1 cut(s)	1030
HaeIII	GGCC	5 cut(s)	258, 273, 509, 782, 904
HapII	CCGG	1 cut(s)	525
HgaI	GACGC	1 cut(s)	265
HhaI	GCGC	3 cut(s)	962, 1041, 1043
Hin1II	CATG	4 cut(s)	368, 386, 430, 909
Hin6I	GCGC	3 cut(s)	960, 1039, 1041
HinP1I	GCGC	3 cut(s)	960, 1039, 1041
HinfI	GANTC	6 cut(s)	167, 231, 470, 943, 992, 1013
HpaII	CCGG	1 cut(s)	525
HphI	GGTGA	3 cut(s)	83, 472, 1010
Hpy166II	GTNNAC	2 cut(s)	616, 646
Hpy188I	TCNGA	3 cut(s)	178, 268, 693
Hpy188III	TCNNGA	5 cut(s)	451, 668, 824, 856, 947
Hpy8I	GTNNAC	2 cut(s)	616, 646
HpyAV	CCTTC	2 cut(s)	592, 850
HpyCH4III	ACNGT	2 cut(s)	520, 613
HpyCH4IV	ACGT	1 cut(s)	625
HpyCH4V	TGCA	6 cut(s)	296, 380, 539, 723, 769, 953
HpyF10VI	GCNNNNNNNGC	3 cut(s)	148, 959, 1036
HpyF3I	CTNAG	1 cut(s)	58
HpySE526I	ACGT	1 cut(s)	625
Hsp92II	CATG	4 cut(s)	368, 386, 430, 909
HspAI	GCGC	3 cut(s)	960, 1039, 1041
Kzo9I	GATC	4 cut(s)	418, 490, 826, 1061
LguI	GCTCTTC	1 cut(s)	1068
LmnI	GCTCC	1 cut(s)	693
Lsp1109I	GCAGC	3 cut(s)	73, 151, 781
LweI	GCATC	1 cut(s)	940
MaeI	CTAG	3 cut(s)	77, 743, 872
MaeII	ACGT	1 cut(s)	625
MaeIII	GTNAC	1 cut(s)	514
MalI	GATC	4 cut(s)	420, 492, 828, 1063
MboI	GATC	4 cut(s)	418, 490, 826, 1061
MboII	GAAGA	7 cut(s)	37, 40, 439, 469, 798, 801, 1085
MfeI	CAATTG	1 cut(s)	605
MflI	RGATCY	2 cut(s)	418, 490
MhlI	GDGCHC	2 cut(s)	698, 1080
MlsI	TGGCCA	1 cut(s)	782
MluCI	AATT	4 cut(s)	373, 605, 704, 1087
MluNI	TGGCCA	1 cut(s)	782
MlyI	GAGTC	2 cut(s)	464, 952
MmeI	TCCRAC	1 cut(s)	376
Mox20I	TGGCCA	1 cut(s)	782
MscI	TGGCCA	1 cut(s)	782
MseI	TTAA	2 cut(s)	402, 1090
MslI	CAYNNNNRTG	3 cut(s)	308, 395, 848
Msp20I	TGGCCA	1 cut(s)	782
MspA1I	CMGCKG	1 cut(s)	86
MspI	CCGG	1 cut(s)	525
MspR9I	CCNGG	1 cut(s)	243
MunI	CAATTG	1 cut(s)	605
MvaI	CCWGG	1 cut(s)	243
MvnI	CGCG	2 cut(s)	276, 1041
MwoI	GCNNNNNNNGC	3 cut(s)	148, 959, 1036
NdeII	GATC	4 cut(s)	418, 490, 826, 1061
NlaIII	CATG	4 cut(s)	368, 386, 430, 909
NlaIV	GGNNCC	2 cut(s)	350, 420
NmuCI	GTSAC	1 cut(s)	514
OliI	CACNNNNGTG	2 cut(s)	395, 848
PauI	GCGCGC	1 cut(s)	1039
PciSI	GCTCTTC	1 cut(s)	1068
PfeI	GAWTC	4 cut(s)	167, 231, 992, 1013
Pfl23II	CGTACG	1 cut(s)	225
PflFI	GACNNNGTC	1 cut(s)	473
PkrI	GCNGC	4 cut(s)	88, 141, 275, 771
PleI	GAGTC	2 cut(s)	464, 951
PpsI	GAGTC	2 cut(s)	464, 951
Psp124BI	GAGCTC	1 cut(s)	1080
Psp6I	CCWGG	1 cut(s)	241
PspFI	CCCAGC	1 cut(s)	1026
PspGI	CCWGG	1 cut(s)	241
PspLI	CGTACG	1 cut(s)	225
PspN4I	GGNNCC	2 cut(s)	350, 420
PspPI	GGNCC	2 cut(s)	349, 508
PsuI	RGATCY	2 cut(s)	418, 490
PsyI	GACNNNGTC	1 cut(s)	473
PteI	GCGCGC	1 cut(s)	1039
PvuII	CAGCTG	1 cut(s)	86
RsaI	GTAC	1 cut(s)	227
RsaNI	GTAC	1 cut(s)	226
RseI	CAYNNNNRTG	3 cut(s)	308, 395, 848
SacI	GAGCTC	1 cut(s)	1080
SapI	GCTCTTC	1 cut(s)	1068
SaqAI	TTAA	2 cut(s)	402, 1090
SatI	GCNGC	4 cut(s)	87, 140, 274, 770
Sau3AI	GATC	4 cut(s)	418, 490, 826, 1061
Sau96I	GGNCC	2 cut(s)	349, 508
SchI	GAGTC	2 cut(s)	464, 952
ScrFI	CCNGG	1 cut(s)	243
SduI	GDGCHC	2 cut(s)	698, 1080
SfaNI	GCATC	1 cut(s)	940
SinI	GGWCC	1 cut(s)	349
SmiMI	CAYNNNNRTG	3 cut(s)	308, 395, 848
Sse9I	AATT	4 cut(s)	373, 605, 704, 1087
SsiI	CCGC	3 cut(s)	103, 121, 274
SspMI	CTAG	3 cut(s)	77, 743, 872
SstI	GAGCTC	1 cut(s)	1080
StyD4I	CCNGG	1 cut(s)	241
StyI	CCWWGG	3 cut(s)	408, 486, 871
TaaI	ACNGT	2 cut(s)	520, 613
TaiI	ACGT	1 cut(s)	628
TaqI	TCGA	1 cut(s)	825
TasI	AATT	4 cut(s)	373, 605, 704, 1087
TauI	GCSGC	1 cut(s)	276
TfiI	GAWTC	4 cut(s)	167, 231, 992, 1013
Tru1I	TTAA	2 cut(s)	402, 1090
Tru9I	TTAA	2 cut(s)	402, 1090
TscAI	CASTG	4 cut(s)	207, 259, 289, 931
TseFI	GTSAC	1 cut(s)	514
TseI	GCWGC	3 cut(s)	86, 139, 769
Tsp45I	GTSAC	1 cut(s)	514
TspDTI	ATGAA	3 cut(s)	159, 292, 574
TspGWI	ACGGA	3 cut(s)	213, 243, 493
TspRI	CASTG	4 cut(s)	207, 259, 289, 931
Tth111I	GACNNNGTC	1 cut(s)	473
VpaK11BI	GGWCC	1 cut(s)	349
XapI	RAATTY	2 cut(s)	373, 704
XcmI	CCANNNNNNNNNTGG	1 cut(s)	722
XmaJI	CCTAGG	1 cut(s)	871
XspI	CTAG	3 cut(s)	77, 743, 872

Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.