Rorug01G0103300

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_rugosa
GWHBQTZ00000001
OG0000107
Physical Location & Seq
Forward (+)
17175051 .. 17186344
11294 bp
Loading structure...
UTR
Exon/CDS
Intron
Rorug01G0103300.1

Sequence Viewer

Length: 1992 bp
ATGGCTAGGGTTTCATTTTCGGTGGTAGCTATGTTGCTGCTTTGGTGGTGGGTGGCTATGGCGAAGGTGAAGGTGAAGGCGGAGTACATCAAGTACAAAGATCCAAACCAACCGGCCGCCGCTCGAGTTGGGGACCTTCTCAGCAGAATGACTCTTGAAGAGAAAATTGGTCAGATGGTGCAGATTGATAGAAGTGTTGCCAATGTCGACACCATGAAAACTTACTTCATTGGGAGTGTGTTGAGCGGCGGTGGTAGTGCACCGCTTCCAGAGGCCAGTGCCGAGGACTGGGTTAACATGATCAATGGATTTCAGAAGGGGGCTCTAGCTAGCCGTTTGGGGATTCCCATGATTTATGGCATTGATGCTGTTCATGGACACAATAACGTCTATAATGCTACAATATTTCCGCATAATGTTGGGCTTGGAGCTACCAGGGATCCTGAACTGGCGAAAAGAATTGGTGCTGCAACTGCTCTTGAAGTCCGAGCTACGGGCATTCCTTATGCATTTGCTCCATGCATTGCGGTATGTAGAGATCCACGATGGGGTCGCTGTTATGAAAGCTACAGCGAGGATCACAAAATTGTGCAAGCAATGACAGAAATTATTCCAGGTTTACAGGGAGATATTCCTGCTAATTCTCGGAAAGGAGTTCCATATGTTGGCGGAAATAAAAAGGTTGCTGCTTGTGCAAAGCATTTTGTGGGTGATGGTGGGACAAGCAAGGGCATTAATGAGAACAACACTGTTATTGACCGACATGATTTGCTTAGCATCCACATGCCTGCTTATTCTGATTCGATTATCAAGGGTGTCTCCACAGTGATGATTTCGTACTCCAGTTGGAATGGGGAGAAGATGCATGCAAACCGTGACCTAGTTACTGGCTTCCTTAAAGAGACCCTTAAGTTTAAGGGTTTTGTTATATCAGACTGGGAGGGAATTGACAGGATTACCTCGCCACCACATTCAAACTACACATACTCTGTCCAAGCTTCAATTCTTGCTGGAATAGACATGGTAATGGTTCCTGTTAACTATAAAGAGTTCATCAATGATCTCACCTACCTGATCAAGAACAATGTTATCCCAATGGATCGTATTGATGATGCTGTCGGAAGGATTTTGCTTGTCAAGTTTACCATGGGTCTTTTTGAGAACCCTTTGGGTGATCTCAGCCTAGTCAATGAGCTTGGAAGCCAGGCTCATAGAGATTTGGCAAGGGAGGCTGTCAGAAAGTCACTTGTGCTTCTGAAGAATGGGAAAAATGGAACCAATCCGGTCCTACCTCTTCCTAAGAAGGTGCCCAAAATCTTGGTTGCTGGCAGTCATGCTGATAATCTGGGTTACCAGTGTGGTGGATGGACAATTGCTTGGCAAGGATTCAGTGGTAACAACTATACAAGGGGAACTACCGTTCTTGGTGCTATCAAATCAACAGTTGATTCAAGCACAGAAGTTATCTATCATGAGAATCCTGATGGTGAATTTGTTAAGTCCAACAACTTTGAATATGCCATTGTTGTTGTTGGCGAGCACCCTTATGCCGAGACTTATGGAGACAGCATGAACTTAACTATGGTGGATCCTGGCCCAAGTGTCATCACCAGTGTGTGTGAAGCTGTCAAGTGCATTGTTATTATAATTTCTGGCAGACCTGTTGTGATCGAACCATATGTTTCCTCAATTGATGCCCTGGTGGCAGCATGGTTGCCAGGAACTGAAGGCCAAGGCATTACTGATGTCCTTTATGGCGAGTATGGATTCAGCGGAAAGCTTTCGAGAACATGGTTCAGAAGTGTAGATCAACTTCCAATGAATGTTGGGGATCCACACTATGATCCACTTTTCCCTTTTGGGTTTGGACTTGAAACTGAGTCAGTTAAGGAGCTCGTAACAAGGTCAACTTCAGCTGGTGTATTTGGAAGGCCATGCACACTTCTCATTGTCGTTGCTCTAATTCTCAGCTTCAGACAAGAGTTTCTATAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

663

Amino Acids

72.33

Weight (kDa)

6.3

Isoelectric Point (pI)

25.61

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Glyco_hydro_3 PF00933 51 - 377 4.6e-67 Glycosyl hydrolase family 3 N terminal domain
Glyco_hydro_3_C PF01915 416 - 625 1.9e-36 Glycosyl hydrolase family 3 C-terminal domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1646
AccB1I GGYRCC 1 cut(s) 1306
AccB7I CCANNNNNTGG 1 cut(s) 665
AccBSI CCGCTC 2 cut(s) 122, 246
AccI GTMKAC 1 cut(s) 207
AcoI YGGCCR 1 cut(s) 114
AcsI RAATTY 1 cut(s) 1490
AcuI CTGAAG 4 cut(s) 1277, 1746, 1896, 1957
AfaI GTAC 3 cut(s) 86, 95, 839
AfiI CCNNNNNNNGG 4 cut(s) 288, 493, 548, 665
AflII CTTAAG 1 cut(s) 908
AgsI TTSAA 7 cut(s) 158, 482, 975, 1002, 1452, 1514, 1874
AjnI CCWGG 6 cut(s) 434, 613, 1203, 1591, 1698, 1717
AjuI GAANNNNNNNTTGG 4 cut(s) 150, 182, 987, 1019
AleI CACNNNNGTG 1 cut(s) 1613
AloI GAACNNNNNNTCC 2 cut(s) 1404, 1436
Alw21I GWGCWC 3 cut(s) 262, 1542, 1896
Alw26I GTCTC 4 cut(s) 823, 896, 1547, 1557
Alw44I GTGCAC 1 cut(s) 258
AlwNI CAGNNNCTG 1 cut(s) 1724
Ama87I CYCGRG 1 cut(s) 123
AoxI GGCC 5 cut(s) 114, 273, 1594, 1729, 1931
ApaLI GTGCAC 1 cut(s) 258
ApeKI GCWGC 4 cut(s) 37, 467, 686, 1706
ApoI RAATTY 1 cut(s) 1490
AseI ATTAAT 1 cut(s) 735
Asp700I GAANNNNTTC 2 cut(s) 609, 1780
AspS9I GGNCC 3 cut(s) 133, 1285, 1595
AsuHPI GGTGA 7 cut(s) 79, 85, 722, 1057, 1184, 1499, 1600
AsuNHI GCTAGC 1 cut(s) 329
AvaI CYCGRG 1 cut(s) 123
AvaII GGWCC 2 cut(s) 133, 1285
BaeGI GKGCMC 2 cut(s) 262, 1311
BamHI GGATCC 3 cut(s) 439, 1588, 1831
BanI GGYRCC 1 cut(s) 1306
BanII GRGCYC 2 cut(s) 325, 1896
BarI GAAGNNNNNNTAC 4 cut(s) 68, 100, 1797, 1829
Bbv12I GWGCWC 3 cut(s) 262, 1542, 1896
BbvI GCAGC 4 cut(s) 24, 454, 673, 1718
BccI CCATC 5 cut(s) 169, 540, 707, 1359, 1478
BceAI ACGGC 1 cut(s) 318
BciT130I CCWGG 6 cut(s) 436, 615, 1205, 1593, 1700, 1719
BclI TGATCA 2 cut(s) 300, 1074
BcoDI GTCTC 4 cut(s) 823, 896, 1547, 1557
BfaI CTAG 5 cut(s) 6, 326, 330, 881, 1184
BfmI CTRYAG 2 cut(s) 568, 1988
BfrI CTTAAG 1 cut(s) 908
BglI GCCNNNNNGGC 1 cut(s) 1703
BisI GCNGC 7 cut(s) 38, 117, 120, 247, 468, 687, 1707
BlpI GCTNAGC 1 cut(s) 773
BlsI GCNGC 7 cut(s) 39, 118, 121, 248, 469, 688, 1708
Bme1390I CCNGG 6 cut(s) 436, 615, 1205, 1593, 1700, 1719
Bme18I GGWCC 2 cut(s) 133, 1285
BmeT110I CYCGRG 1 cut(s) 123
BmgT120I GGNCC 3 cut(s) 133, 1285, 1595
BmiI GGNNCC 7 cut(s) 134, 441, 1032, 1276, 1308, 1590, 1833
BmrFI CCNGG 6 cut(s) 436, 615, 1205, 1593, 1700, 1719
BmrI ACTGGG 2 cut(s) 298, 946
BmsI GCATC 5 cut(s) 355, 786, 852, 1102, 1684
BmtI GCTAGC 1 cut(s) 333
BmuI ACTGGG 2 cut(s) 298, 946
BpmI CTGGAG 1 cut(s) 826
Bpu1102I GCTNAGC 1 cut(s) 773
BsaI GGTCTC 1 cut(s) 896
BsaJI CCNNGG 5 cut(s) 282, 435, 1146, 1698, 1732
BsaWI WCCGGW 1 cut(s) 1282
Bsc4I CCNNNNNNNGG 4 cut(s) 288, 493, 548, 665
Bse118I RCCGGY 1 cut(s) 112
Bse1I ACTGG 8 cut(s) 276, 293, 453, 843, 892, 941, 1354, 1611
Bse3DI GCAATG 2 cut(s) 522, 603
BseBI CCWGG 6 cut(s) 436, 615, 1205, 1593, 1700, 1719
BseDI CCNNGG 5 cut(s) 282, 435, 1146, 1698, 1732
BseGI GGATG 2 cut(s) 777, 1370
BseLI CCNNNNNNNGG 4 cut(s) 288, 493, 548, 665
BseMI GCAATG 2 cut(s) 522, 603
BseMII CTCAG 4 cut(s) 154, 1192, 1869, 1981
BseNI ACTGG 8 cut(s) 276, 293, 453, 843, 892, 941, 1354, 1611
BseSI GKGCMC 2 cut(s) 262, 1311
BseX3I CGGCCG 1 cut(s) 114
BseXI GCAGC 4 cut(s) 24, 454, 673, 1718
BsgI GTGCAG 1 cut(s) 200
Bsh1285I CGRYCG 1 cut(s) 117
BshFI GGCC 5 cut(s) 116, 275, 1596, 1731, 1933
BshNI GGYRCC 1 cut(s) 1306
BsiEI CGRYCG 1 cut(s) 117
BsiHKAI GWGCWC 3 cut(s) 262, 1542, 1896
BsiHKCI CYCGRG 1 cut(s) 123
BsiSI CCGG 2 cut(s) 113, 1283
BslFI GGGAC 2 cut(s) 146, 733
BslI CCNNNNNNNGG 4 cut(s) 288, 493, 548, 665
BsmAI GTCTC 4 cut(s) 823, 896, 1547, 1557
BsmFI GGGAC 2 cut(s) 146, 733
BsmI GAATGC 1 cut(s) 498
BsnI GGCC 5 cut(s) 116, 275, 1596, 1731, 1933
Bso31I GGTCTC 1 cut(s) 896
BsoBI CYCGRG 1 cut(s) 123
Bsp1286I GDGCHC 5 cut(s) 262, 325, 1311, 1542, 1896
Bsp1720I GCTNAGC 1 cut(s) 773
Bsp19I CCATGG 1 cut(s) 1146
BspANI GGCC 5 cut(s) 116, 275, 1596, 1731, 1933
BspCNI CTCAG 4 cut(s) 153, 1191, 1870, 1980
BspHI TCATGA 1 cut(s) 1471
BspLI GGNNCC 7 cut(s) 134, 441, 1032, 1276, 1308, 1590, 1833
BspOI GCTAGC 1 cut(s) 333
BspT107I GGYRCC 1 cut(s) 1306
BspTI CTTAAG 1 cut(s) 908
BspTNI GGTCTC 1 cut(s) 896
BsrBI CCGCTC 2 cut(s) 122, 246
BsrDI GCAATG 2 cut(s) 522, 603
BsrFI RCCGGY 1 cut(s) 112
BsrI ACTGG 8 cut(s) 276, 293, 453, 843, 892, 941, 1354, 1611
BssAI RCCGGY 1 cut(s) 112
BssECI CCNNGG 5 cut(s) 282, 435, 1146, 1698, 1732
BssT1I CCWWGG 2 cut(s) 1146, 1732
Bst2UI CCWGG 6 cut(s) 436, 615, 1205, 1593, 1700, 1719
Bst4CI ACNGT 5 cut(s) 751, 826, 875, 1420, 1444
Bst6I CTCTTC 2 cut(s) 153, 1299
BstAFI CTTAAG 1 cut(s) 908
BstC8I GCNNGC 6 cut(s) 331, 594, 789, 867, 1327, 1538
BstDEI CTNAG 6 cut(s) 140, 773, 1178, 1299, 1878, 1967
BstDSI CCRYGG 1 cut(s) 1146
BstEII GGTNACC 1 cut(s) 1349
BstF5I GGATG 2 cut(s) 777, 1370
BstMAI GTCTC 4 cut(s) 823, 896, 1547, 1557
BstMCI CGRYCG 1 cut(s) 117
BstMWI GCNNNNNNNGC 4 cut(s) 473, 692, 1229, 1703
BstNI CCWGG 6 cut(s) 436, 615, 1205, 1593, 1700, 1719
BstNSI RCATGY 2 cut(s) 787, 869
BstPI GGTNACC 1 cut(s) 1349
BstSCI CCNGG 6 cut(s) 434, 613, 1203, 1591, 1698, 1717
BstSFI CTRYAG 2 cut(s) 568, 1988
BstSLI GKGCMC 2 cut(s) 262, 1311
BstV1I GCAGC 4 cut(s) 24, 454, 673, 1718
BstX2I RGATCY 5 cut(s) 100, 439, 538, 1588, 1831
BstXI CCANNNNNNTGG 2 cut(s) 1318, 1361
BstYI RGATCY 5 cut(s) 100, 439, 538, 1588, 1831
BstZI CGGCCG 1 cut(s) 114
BsuRI GGCC 5 cut(s) 116, 275, 1596, 1731, 1933
BtgI CCRYGG 1 cut(s) 1146
BtsCI GGATG 2 cut(s) 777, 1370
BtsIMutI CAGTG 6 cut(s) 283, 747, 831, 1361, 1396, 1618
Cac8I GCNNGC 6 cut(s) 331, 594, 789, 867, 1327, 1538
CaiI CAGNNNCTG 1 cut(s) 1724
CciI TCATGA 1 cut(s) 1471
Cfr10I RCCGGY 1 cut(s) 112
Cfr13I GGNCC 3 cut(s) 133, 1285, 1595
Csp6I GTAC 3 cut(s) 85, 94, 838
CviQI GTAC 3 cut(s) 85, 94, 838
DdeI CTNAG 6 cut(s) 140, 773, 1178, 1299, 1878, 1967
EaeI YGGCCR 1 cut(s) 114
EagI CGGCCG 1 cut(s) 114
Eam1104I CTCTTC 2 cut(s) 153, 1299
EarI CTCTTC 2 cut(s) 153, 1299
EciI GGCGGA 2 cut(s) 95, 684
Ecl136II GAGCTC 1 cut(s) 1894
EclXI CGGCCG 1 cut(s) 114
Eco130I CCWWGG 2 cut(s) 1146, 1732
Eco24I GRGCYC 2 cut(s) 325, 1896
Eco31I GGTCTC 1 cut(s) 896
Eco47I GGWCC 2 cut(s) 133, 1285
Eco52I CGGCCG 1 cut(s) 114
Eco53kI GAGCTC 1 cut(s) 1894
Eco57I CTGAAG 4 cut(s) 1277, 1746, 1896, 1957
Eco88I CYCGRG 1 cut(s) 123
Eco91I GGTNACC 1 cut(s) 1349
EcoICRI GAGCTC 1 cut(s) 1894
EcoO109I RGGNCCY 1 cut(s) 133
EcoO65I GGTNACC 1 cut(s) 1349
EcoRII CCWGG 6 cut(s) 434, 613, 1203, 1591, 1698, 1717
EcoT14I CCWWGG 2 cut(s) 1146, 1732
EcoT22I ATGCAT 3 cut(s) 511, 524, 867
EcoT38I GRGCYC 2 cut(s) 325, 1896
ErhI CCWWGG 2 cut(s) 1146, 1732
FalI AAGNNNNNCTT 4 cut(s) 891, 923, 1894, 1926
FaqI GGGAC 2 cut(s) 146, 733
FauNDI CATATG 2 cut(s) 661, 1678
FbaI TGATCA 2 cut(s) 300, 1074
FblI GTMKAC 1 cut(s) 207
Fnu4HI GCNGC 7 cut(s) 38, 117, 120, 247, 468, 687, 1707
FokI GGATG 2 cut(s) 764, 1377
FriOI GRGCYC 2 cut(s) 325, 1896
Fsp4HI GCNGC 7 cut(s) 38, 117, 120, 247, 468, 687, 1707
FspBI CTAG 5 cut(s) 6, 326, 330, 881, 1184
GluI GCNGC 7 cut(s) 38, 117, 120, 247, 468, 687, 1707
GsuI CTGGAG 1 cut(s) 826
HaeIII GGCC 5 cut(s) 116, 275, 1596, 1731, 1933
HapII CCGG 2 cut(s) 113, 1283
HincII GTYRAC 4 cut(s) 208, 295, 1039, 1908
HindII GTYRAC 4 cut(s) 208, 295, 1039, 1908
HindIII AAGCTT 2 cut(s) 996, 1778
HinfI GANTC 8 cut(s) 151, 343, 800, 1386, 1448, 1477, 1767, 1880
HpaI GTTAAC 2 cut(s) 295, 1039
HpaII CCGG 2 cut(s) 113, 1283
HphI GGTGA 7 cut(s) 79, 85, 722, 1057, 1184, 1499, 1600
Hpy166II GTNNAC 7 cut(s) 208, 260, 295, 620, 1039, 1143, 1908
Hpy188III TCNNGA 8 cut(s) 155, 269, 443, 479, 1078, 1472, 1481, 1785
Hpy8I GTNNAC 7 cut(s) 208, 260, 295, 620, 1039, 1143, 1908
HpyAV CCTTC 9 cut(s) 58, 64, 70, 146, 310, 1116, 1297, 1721, 1923
HpyCH4III ACNGT 5 cut(s) 751, 826, 875, 1420, 1444
HpyCH4IV ACGT 1 cut(s) 387
HpyF10VI GCNNNNNNNGC 4 cut(s) 473, 692, 1229, 1703
HpyF3I CTNAG 6 cut(s) 140, 773, 1178, 1299, 1878, 1967
HpySE526I ACGT 1 cut(s) 387
Ksp22I TGATCA 2 cut(s) 300, 1074
KspAI GTTAAC 2 cut(s) 295, 1039
LmnI GCTCC 3 cut(s) 428, 520, 1891
Lsp1109I GCAGC 4 cut(s) 24, 454, 673, 1718
LweI GCATC 5 cut(s) 355, 786, 852, 1102, 1684
MaeI CTAG 5 cut(s) 6, 326, 330, 881, 1184
MaeII ACGT 1 cut(s) 387
MaeIII GTNAC 6 cut(s) 875, 883, 1242, 1349, 1394, 1897
MbiI CCGCTC 2 cut(s) 122, 246
MboII GAAGA 4 cut(s) 170, 871, 1270, 1286
MfeI CAATTG 2 cut(s) 1371, 1689
MflI RGATCY 5 cut(s) 100, 439, 538, 1588, 1831
MhlI GDGCHC 5 cut(s) 262, 325, 1311, 1542, 1896
MlyI GAGTC 2 cut(s) 145, 1889
MmeI TCCRAC 3 cut(s) 827, 1099, 1527
MnlI CCTC 8 cut(s) 265, 277, 568, 934, 970, 1222, 1302, 1696
Mph1103I ATGCAT 3 cut(s) 511, 524, 867
MroXI GAANNNNTTC 2 cut(s) 609, 1780
MseI TTAA 9 cut(s) 294, 735, 897, 909, 915, 1038, 1497, 1577, 1887
MslI CAYNNNNRTG 5 cut(s) 782, 827, 1025, 1545, 1613
MspA1I CMGCKG 2 cut(s) 1773, 1916
MspCI CTTAAG 1 cut(s) 908
MspI CCGG 2 cut(s) 113, 1283
MspR9I CCNGG 6 cut(s) 436, 615, 1205, 1593, 1700, 1719
MunI CAATTG 2 cut(s) 1371, 1689
Mva1269I GAATGC 1 cut(s) 498
MvaI CCWGG 6 cut(s) 436, 615, 1205, 1593, 1700, 1719
MwoI GCNNNNNNNGC 4 cut(s) 473, 692, 1229, 1703
NcoI CCATGG 1 cut(s) 1146
NdeI CATATG 2 cut(s) 661, 1678
NheI GCTAGC 1 cut(s) 329
NlaIV GGNNCC 7 cut(s) 134, 441, 1032, 1276, 1308, 1590, 1833
NmeAIII GCCGAG 2 cut(s) 307, 1576
NmuCI GTSAC 2 cut(s) 875, 1242
NsiI ATGCAT 3 cut(s) 511, 524, 867
NspI RCATGY 2 cut(s) 787, 869
OliI CACNNNNGTG 1 cut(s) 1613
PaeI GCATGC 1 cut(s) 869
PaeR7I CTCGAG 1 cut(s) 123
PagI TCATGA 1 cut(s) 1471
PctI GAATGC 1 cut(s) 498
PdmI GAANNNNTTC 2 cut(s) 609, 1780
PfeI GAWTC 6 cut(s) 343, 800, 1386, 1448, 1477, 1767
PflMI CCANNNNNTGG 1 cut(s) 665
PkrI GCNGC 7 cut(s) 39, 118, 121, 248, 469, 688, 1708
PleI GAGTC 2 cut(s) 145, 1888
PpsI GAGTC 2 cut(s) 145, 1888
PpuMI RGGWCCY 1 cut(s) 133
PshBI ATTAAT 1 cut(s) 735
PsiI TTATAA 1 cut(s) 1646
Psp124BI GAGCTC 1 cut(s) 1896
Psp5II RGGWCCY 1 cut(s) 133
Psp6I CCWGG 6 cut(s) 434, 613, 1203, 1591, 1698, 1717
PspEI GGTNACC 1 cut(s) 1349
PspGI CCWGG 6 cut(s) 434, 613, 1203, 1591, 1698, 1717
PspN4I GGNNCC 7 cut(s) 134, 441, 1032, 1276, 1308, 1590, 1833
PspPI GGNCC 3 cut(s) 133, 1285, 1595
PspPPI RGGWCCY 1 cut(s) 133
PspXI VCTCGAGB 1 cut(s) 123
PstNI CAGNNNCTG 1 cut(s) 1724
PsuI RGATCY 5 cut(s) 100, 439, 538, 1588, 1831
PvuII CAGCTG 1 cut(s) 1916
RsaI GTAC 3 cut(s) 86, 95, 839
RsaNI GTAC 3 cut(s) 85, 94, 838
RseI CAYNNNNRTG 5 cut(s) 782, 827, 1025, 1545, 1613
SacI GAGCTC 1 cut(s) 1896
SalI GTCGAC 1 cut(s) 206
SaqAI TTAA 9 cut(s) 294, 735, 897, 909, 915, 1038, 1497, 1577, 1887
SatI GCNGC 7 cut(s) 38, 117, 120, 247, 468, 687, 1707
Sau96I GGNCC 3 cut(s) 133, 1285, 1595
SchI GAGTC 2 cut(s) 145, 1889
ScrFI CCNGG 6 cut(s) 436, 615, 1205, 1593, 1700, 1719
SduI GDGCHC 5 cut(s) 262, 325, 1311, 1542, 1896
SfaNI GCATC 5 cut(s) 355, 786, 852, 1102, 1684
SfcI CTRYAG 2 cut(s) 568, 1988
Sfr274I CTCGAG 1 cut(s) 123
SinI GGWCC 2 cut(s) 133, 1285
SlaI CTCGAG 1 cut(s) 123
SmiMI CAYNNNNRTG 5 cut(s) 782, 827, 1025, 1545, 1613
SmlI CTYRAG 2 cut(s) 123, 908
SmoI CTYRAG 2 cut(s) 123, 908
SphI GCATGC 1 cut(s) 869
SspI AATATT 1 cut(s) 405
SspMI CTAG 5 cut(s) 6, 326, 330, 881, 1184
SstI GAGCTC 1 cut(s) 1896
StyD4I CCNGG 6 cut(s) 434, 613, 1203, 1591, 1698, 1717
StyI CCWWGG 2 cut(s) 1146, 1732
TaaI ACNGT 5 cut(s) 751, 826, 875, 1420, 1444
TaiI ACGT 1 cut(s) 390
TaqI TCGA 5 cut(s) 124, 207, 803, 1671, 1784
TaqII GACCGA 1 cut(s) 774
TatI WGTACW 2 cut(s) 84, 93
TauI GCSGC 3 cut(s) 119, 122, 249
TfiI GAWTC 6 cut(s) 343, 800, 1386, 1448, 1477, 1767
Tru1I TTAA 9 cut(s) 294, 735, 897, 909, 915, 1038, 1497, 1577, 1887
Tru9I TTAA 9 cut(s) 294, 735, 897, 909, 915, 1038, 1497, 1577, 1887
TscAI CASTG 6 cut(s) 283, 754, 831, 1361, 1396, 1618
TseFI GTSAC 2 cut(s) 875, 1242
TseI GCWGC 4 cut(s) 37, 467, 686, 1706
Tsp45I GTSAC 2 cut(s) 875, 1242
TspDTI ATGAA 7 cut(s) 217, 230, 362, 576, 1042, 1586, 1835
TspRI CASTG 6 cut(s) 283, 754, 831, 1361, 1396, 1618
Van91I CCANNNNNTGG 1 cut(s) 665
Vha464I CTTAAG 1 cut(s) 908
VneI GTGCAC 1 cut(s) 258
VpaK11BI GGWCC 2 cut(s) 133, 1285
VspI ATTAAT 1 cut(s) 735
XapI RAATTY 1 cut(s) 1490
XceI RCATGY 2 cut(s) 787, 869
XhoI CTCGAG 1 cut(s) 123
XmiI GTMKAC 1 cut(s) 207
XmnI GAANNNNTTC 2 cut(s) 609, 1780
XspI CTAG 5 cut(s) 6, 326, 330, 881, 1184
Zsp2I ATGCAT 3 cut(s) 511, 524, 867
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.