Rh1CG125600

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_samantha
Chr1C
OG0000107
Physical Location & Seq
Forward (+)
27331835 .. 27334586
2752 bp
Loading structure...
UTR
Exon/CDS
Intron
Rh1CG125600.1

Sequence Viewer

Length: 1845 bp
ATGGCAACTGTTACTTCAGAAATACAGCAGATGCTCGTCTCTTTCTTCTGCTTCTTCTTAATAACTTCCTCCAAACTGCTGGGAGCAGCCGGAAATTCCTGCACAGAATCCAAGTGTGAGGATAATGATGCTCCAGCCATTCACTACCCTTTCCGTCGCGGACAGCATTGTGGCTATGATCCTGTGCTACAATGCACCCAGCCCAATGAAACAGTAGTTGCGGAGAAGTCAGTAGTGCTGGTAAAATTCTTTGTCAAACACATAGATTATAAGCAACAGAAAATCCAGCTCAGTCAACCAGATGATTGCCTCCTGCTAACGCCTTTGGGCAGCCCACACAAGCCAACTTCTCCTTTCTATTTCCCAGAGGACAGCATGAATATTACCCTATATCAATGTCCTACCATTCCTTTTGAAAGAGAGTATCTAAAGCAAGTCCCTTGCTTCGGTGGCCCTGCCTCCCAAACATACGCCTTTCCTTCAGACTTGGATTTACTTATATACATGGTATCAGTAAGGTCTTGTACAAAGATGTATGATGTTTTATCACTTCCATTTGGAACTTGGTGGGGAAATAAAGAGGATTTTATACTGAATTGGTCTAAACCAAATTGTACTGAATGCGAGGCAGAGGGTAAGAGCTGTAGATTGCAGATGAATGGCACCAACACTGAAATTGAATGTGTTCACTTGAGGAAACCAAGTGCGACAACCAAATTAGTTGCTACAGGTGCAACTGTAGGTTCATTCCTTCTCTTACTACTGCTCATCCCCGTCTATCGTGCTTATAACTCTGATAGAAAGGAAAAGGAACATCAAAAAAAAATTGAAAGATTTTTGGAAGATTACAAAGCTCTCAAGCCAAGCAGGTACTCATATGCAGATATCAAGCGAATTACAAATCAATTCAAGGACAAGGTAGGAGAAGGGGCCTATGGAACAGTGTTTAAAGGAAATCTTTCTTCTGAACTCTATGTTGCTGTGAAAGTCTTGAAAATTTCAGATGGGAATGGAGAAGAATTCATAAATGAAATCGGAACTCTAGGTCATATCCACCATGTTAATGTTGTCCGCTTAGTTGGCTTTTGCGCTGATGGATTTGAACGAGCTCTTGTTTATGACTTCTTCCCCAATGGTTCACTGCAAGATTTCATTTCATCAGCAGATAATAAGAATGGTTTCTTGGGTTGGGATAAGTTGCAAGATGTTGCTCTAGGCATAGCCAAAGGAATTGAATATCTACATCAAGGATGCGATCAACAAATCCTTCATTTTGATATCAAACCCCATAATGTTTTGCTAGACCAGAATTTGACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCAAAGGATCAAAGTATAGTATCAATGACAACAGCAAGGGGCACTATGGGCTACATCGCACCTGAAGTGTTCTCCAGGAACTTCGGGAATGTGTCTCACAAGTCGGATGTCTATAGTTTTGGAATGCTGTTGCTTGAGATGGTAGGAGGAAGGAAGAATATTGGTGCAACCATGGATAACATGCATGCAGTTTACTACCCAAAATGGATCTATAACCTCTTGGAAAAAGGAGAAGACCTCCGAATCCATATTGGGGAAGAAGGGAATTCAAAAATTCCAGAGAAACTTTCAATTATTGGGCTCTCATGCATCCAGTGGTACCCGGTGGCTCGTCCTTCCATGAAAGCAGTGGTTCAGATGCTAGAGGGAAGAGAAAAATTAACAATGCCGCCTAATCCTTTTGCAACAACAGGTCATAGTAGAGCAGATATTGGAAGTATCCCTAAACGACCCATGTGCCTTGAATTAGAAACAATTACTGAATTAGACTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

614

Amino Acids

68.91

Weight (kDa)

6.37

Isoelectric Point (pI)

46.27

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 34 - 98 1.9e-08 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 302 - 572 1.7e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 303 - 570 6.6e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 270, 789
Acc36I ACCTGC 1 cut(s) 858
Acc65I GGTACC 1 cut(s) 1671
AccB1I GGYRCC 2 cut(s) 662, 1671
AccII CGCG 1 cut(s) 159
AciI CCGC 4 cut(s) 159, 221, 1072, 1742
AclWI GGATC 3 cut(s) 173, 1368, 1568
AcoI YGGCCR 1 cut(s) 1341
AcsI RAATTY 8 cut(s) 94, 245, 996, 1019, 1309, 1323, 1618, 1626
AcuI CTGAAG 2 cut(s) 465, 1437
AfaI GTAC 4 cut(s) 526, 616, 872, 1673
AfiI CCNNNNNNNGG 2 cut(s) 446, 1606
AjnI CCWGG 1 cut(s) 1427
AjuI GAANNNNNNNTTGG 2 cut(s) 1166, 1198
AluBI AGCT 4 cut(s) 289, 642, 854, 1109
AluI AGCT 4 cut(s) 289, 642, 854, 1109
Alw21I GWGCWC 1 cut(s) 1111
Alw26I GTCTC 2 cut(s) 43, 1452
AlwI GGATC 3 cut(s) 173, 1368, 1568
AoxI GGCC 3 cut(s) 451, 930, 1341
ApeKI GCWGC 2 cut(s) 86, 330
ApoI RAATTY 8 cut(s) 94, 245, 996, 1019, 1309, 1323, 1618, 1626
Asp700I GAANNNNTTC 3 cut(s) 684, 958, 1178
Asp718I GGTACC 1 cut(s) 1671
AspLEI GCGC 1 cut(s) 1091
AspS9I GGNCC 2 cut(s) 452, 930
AsuC2I CCSGG 1 cut(s) 1676
BaeGI GKGCMC 1 cut(s) 1397
BalI TGGCCA 1 cut(s) 1343
BanI GGYRCC 2 cut(s) 662, 1671
BanII GRGCYC 2 cut(s) 1111, 1656
BbsI GAAGAC 1 cut(s) 1593
Bbv12I GWGCWC 1 cut(s) 1111
BbvI GCAGC 2 cut(s) 98, 342
BccI CCATC 3 cut(s) 998, 1088, 1486
BcgI CGANNNNNNTGC 2 cut(s) 1791, 1825
BciT130I CCWGG 1 cut(s) 1429
BciVI GTATCC 1 cut(s) 1802
BcnI CCSGG 1 cut(s) 1676
BcoDI GTCTC 2 cut(s) 43, 1452
BfaI CTAG 4 cut(s) 1043, 1214, 1301, 1715
BfmI CTRYAG 4 cut(s) 643, 726, 738, 1465
BfuAI ACCTGC 1 cut(s) 858
BfuI GTATCC 1 cut(s) 1802
BisI GCNGC 3 cut(s) 87, 331, 1742
BlsI GCNGC 3 cut(s) 88, 332, 1743
Bme1390I CCNGG 2 cut(s) 1429, 1676
BmgT120I GGNCC 2 cut(s) 452, 930
BmiI GGNNCC 3 cut(s) 664, 931, 1673
BmrFI CCNGG 2 cut(s) 1429, 1676
BmsI GCATC 5 cut(s) 21, 118, 1241, 1671, 1701
BpiI GAAGAC 1 cut(s) 1593
BplI GAGNNNNNCTC 2 cut(s) 1575, 1607
BpmI CTGGAG 2 cut(s) 117, 1411
BpuEI CTTGAG 3 cut(s) 712, 842, 1508
BpuMI CCSGG 1 cut(s) 1676
BsaJI CCNNGG 1 cut(s) 1524
Bsc4I CCNNNNNNNGG 2 cut(s) 446, 1606
Bse1I ACTGG 1 cut(s) 1666
BseBI CCWGG 1 cut(s) 1429
BseDI CCNNGG 1 cut(s) 1524
BseGI GGATG 4 cut(s) 768, 1256, 1465, 1662
BseLI CCNNNNNNNGG 2 cut(s) 446, 1606
BseMII CTCAG 1 cut(s) 304
BseNI ACTGG 1 cut(s) 1666
BseSI GKGCMC 1 cut(s) 1397
BseXI GCAGC 2 cut(s) 98, 342
BseYI CCCAGC 2 cut(s) 79, 198
BsgI GTGCAG 1 cut(s) 85
Bsh1236I CGCG 1 cut(s) 159
BshFI GGCC 3 cut(s) 453, 932, 1343
BshNI GGYRCC 2 cut(s) 662, 1671
BsiHKAI GWGCWC 1 cut(s) 1111
BsiSI CCGG 2 cut(s) 90, 1676
BslFI GGGAC 1 cut(s) 422
BslI CCNNNNNNNGG 2 cut(s) 446, 1606
BsmAI GTCTC 2 cut(s) 43, 1452
BsmBI CGTCTC 1 cut(s) 43
BsmFI GGGAC 1 cut(s) 422
BsmI GAATGC 2 cut(s) 626, 1482
BsnI GGCC 3 cut(s) 453, 932, 1343
Bsp1286I GDGCHC 3 cut(s) 1111, 1397, 1656
Bsp1407I TGTACA 1 cut(s) 524
Bsp143I GATC 4 cut(s) 178, 1255, 1360, 1560
Bsp19I CCATGG 1 cut(s) 1524
BspACI CCGC 4 cut(s) 159, 221, 1072, 1742
BspANI GGCC 3 cut(s) 453, 932, 1343
BspCNI CTCAG 1 cut(s) 303
BspFNI CGCG 1 cut(s) 159
BspLI GGNNCC 3 cut(s) 664, 931, 1673
BspMI ACCTGC 1 cut(s) 858
BspPI GGATC 3 cut(s) 173, 1368, 1568
BspT107I GGYRCC 2 cut(s) 662, 1671
BsrGI TGTACA 1 cut(s) 524
BsrI ACTGG 1 cut(s) 1666
BssECI CCNNGG 1 cut(s) 1524
BssMI GATC 4 cut(s) 178, 1255, 1360, 1560
BssT1I CCWWGG 1 cut(s) 1524
Bst2UI CCWGG 1 cut(s) 1429
Bst4CI ACNGT 4 cut(s) 10, 214, 739, 943
Bst6I CTCTTC 1 cut(s) 1717
BstAUI TGTACA 1 cut(s) 524
BstC8I GCNNGC 1 cut(s) 1539
BstDEI CTNAG 2 cut(s) 290, 1075
BstDSI CCRYGG 1 cut(s) 1524
BstF5I GGATG 4 cut(s) 768, 1256, 1465, 1662
BstFNI CGCG 1 cut(s) 159
BstHHI GCGC 1 cut(s) 1091
BstKTI GATC 4 cut(s) 181, 1258, 1363, 1563
BstMAI GTCTC 2 cut(s) 43, 1452
BstMBI GATC 4 cut(s) 178, 1255, 1360, 1560
BstMWI GCNNNNNNNGC 4 cut(s) 450, 731, 1080, 1401
BstNI CCWGG 1 cut(s) 1429
BstNSI RCATGY 2 cut(s) 1537, 1541
BstSCI CCNGG 2 cut(s) 1427, 1674
BstSFI CTRYAG 4 cut(s) 643, 726, 738, 1465
BstSLI GKGCMC 1 cut(s) 1397
BstUI CGCG 1 cut(s) 159
BstV1I GCAGC 2 cut(s) 98, 342
BstV2I GAAGAC 1 cut(s) 1593
BstX2I RGATCY 1 cut(s) 1560
BstXI CCANNNNNNTGG 1 cut(s) 79
BstYI RGATCY 1 cut(s) 1560
BsuI GTATCC 1 cut(s) 1802
BsuRI GGCC 3 cut(s) 453, 932, 1343
BtgI CCRYGG 1 cut(s) 1524
BtgZI GCGATG 1 cut(s) 1393
BtsCI GGATG 4 cut(s) 768, 1256, 1465, 1662
BtsI GCAGTG 2 cut(s) 1139, 1707
BtsIMutI CAGTG 5 cut(s) 669, 948, 1139, 1673, 1707
BveI ACCTGC 1 cut(s) 858
Cac8I GCNNGC 1 cut(s) 1539
CfoI GCGC 1 cut(s) 1091
Cfr13I GGNCC 2 cut(s) 452, 930
Csp6I GTAC 4 cut(s) 525, 615, 871, 1672
CviAII CATG 9 cut(s) 376, 505, 1058, 1525, 1534, 1538, 1659, 1693, 1807
CviQI GTAC 4 cut(s) 525, 615, 871, 1672
DdeI CTNAG 2 cut(s) 290, 1075
DpnI GATC 4 cut(s) 180, 1257, 1362, 1562
DpnII GATC 4 cut(s) 178, 1255, 1360, 1560
DraI TTTAAA 1 cut(s) 949
EaeI YGGCCR 1 cut(s) 1341
Eam1104I CTCTTC 1 cut(s) 1717
EarI CTCTTC 1 cut(s) 1717
Ecl136II GAGCTC 1 cut(s) 1109
Eco130I CCWWGG 1 cut(s) 1524
Eco24I GRGCYC 2 cut(s) 1111, 1656
Eco32I GATATC 2 cut(s) 886, 1279
Eco53kI GAGCTC 1 cut(s) 1109
Eco57I CTGAAG 2 cut(s) 465, 1437
EcoICRI GAGCTC 1 cut(s) 1109
EcoO109I RGGNCCY 1 cut(s) 930
EcoRI GAATTC 2 cut(s) 1019, 1618
EcoRII CCWGG 1 cut(s) 1427
EcoRV GATATC 2 cut(s) 886, 1279
EcoT14I CCWWGG 1 cut(s) 1524
EcoT22I ATGCAT 2 cut(s) 1539, 1664
EcoT38I GRGCYC 2 cut(s) 1111, 1656
ErhI CCWWGG 1 cut(s) 1524
Esp3I CGTCTC 1 cut(s) 43
FaeI CATG 9 cut(s) 379, 508, 1061, 1528, 1537, 1541, 1662, 1696, 1810
FalI AAGNNNNNCTT 2 cut(s) 942, 974
FaqI GGGAC 1 cut(s) 422
FatI CATG 9 cut(s) 375, 504, 1057, 1524, 1533, 1537, 1658, 1692, 1806
FauNDI CATATG 1 cut(s) 877
Fnu4HI GCNGC 3 cut(s) 87, 331, 1742
FokI GGATG 4 cut(s) 755, 1263, 1472, 1649
FriOI GRGCYC 2 cut(s) 1111, 1656
Fsp4HI GCNGC 3 cut(s) 87, 331, 1742
FspBI CTAG 4 cut(s) 1043, 1214, 1301, 1715
GlaI GCGC 1 cut(s) 1090
GluI GCNGC 3 cut(s) 87, 331, 1742
GsaI CCCAGC 2 cut(s) 83, 202
GsuI CTGGAG 2 cut(s) 117, 1411
HaeIII GGCC 3 cut(s) 453, 932, 1343
HapII CCGG 2 cut(s) 90, 1676
HhaI GCGC 1 cut(s) 1091
Hin1II CATG 9 cut(s) 379, 508, 1061, 1528, 1537, 1541, 1662, 1696, 1810
Hin6I GCGC 1 cut(s) 1089
HinP1I GCGC 1 cut(s) 1089
HincII GTYRAC 1 cut(s) 296
HindII GTYRAC 1 cut(s) 296
HinfI GANTC 3 cut(s) 107, 1315, 1596
HpaII CCGG 2 cut(s) 90, 1676
Hpy166II GTNNAC 4 cut(s) 296, 688, 1139, 1546
Hpy188III TCNNGA 3 cut(s) 991, 1438, 1631
Hpy8I GTNNAC 4 cut(s) 296, 688, 1139, 1546
Hpy99I CGWCG 1 cut(s) 159
HpyAV CCTTC 7 cut(s) 489, 761, 920, 1277, 1497, 1607, 1698
HpyCH4III ACNGT 4 cut(s) 10, 214, 739, 943
HpyF10VI GCNNNNNNNGC 4 cut(s) 450, 731, 1080, 1401
HpyF3I CTNAG 2 cut(s) 290, 1075
Hsp92II CATG 9 cut(s) 379, 508, 1061, 1528, 1537, 1541, 1662, 1696, 1810
HspAI GCGC 1 cut(s) 1089
KpnI GGTACC 1 cut(s) 1675
Kzo9I GATC 4 cut(s) 178, 1255, 1360, 1560
LmnI GCTCC 2 cut(s) 83, 136
Lsp1109I GCAGC 2 cut(s) 98, 342
LweI GCATC 5 cut(s) 21, 118, 1241, 1671, 1701
MaeI CTAG 4 cut(s) 1043, 1214, 1301, 1715
MaeIII GTNAC 1 cut(s) 10
MalI GATC 4 cut(s) 180, 1257, 1362, 1562
MboI GATC 4 cut(s) 178, 1255, 1360, 1560
MflI RGATCY 1 cut(s) 1560
MhlI GDGCHC 3 cut(s) 1111, 1397, 1656
MlsI TGGCCA 1 cut(s) 1343
MluNI TGGCCA 1 cut(s) 1343
MlyI GAGTC 1 cut(s) 1309
MmeI TCCRAC 1 cut(s) 1437
Mox20I TGGCCA 1 cut(s) 1343
Mph1103I ATGCAT 2 cut(s) 1539, 1664
MroXI GAANNNNTTC 3 cut(s) 684, 958, 1178
MscI TGGCCA 1 cut(s) 1343
MseI TTAA 4 cut(s) 59, 948, 1062, 1733
MslI CAYNNNNRTG 1 cut(s) 1062
Msp20I TGGCCA 1 cut(s) 1343
MspI CCGG 2 cut(s) 90, 1676
MspR9I CCNGG 2 cut(s) 1429, 1676
Mva1269I GAATGC 2 cut(s) 626, 1482
MvaI CCWGG 1 cut(s) 1429
MvnI CGCG 1 cut(s) 159
MwoI GCNNNNNNNGC 4 cut(s) 450, 731, 1080, 1401
NciI CCSGG 1 cut(s) 1676
NcoI CCATGG 1 cut(s) 1524
NdeI CATATG 1 cut(s) 877
NdeII GATC 4 cut(s) 178, 1255, 1360, 1560
NlaIII CATG 9 cut(s) 379, 508, 1061, 1528, 1537, 1541, 1662, 1696, 1810
NlaIV GGNNCC 3 cut(s) 664, 931, 1673
NsiI ATGCAT 2 cut(s) 1539, 1664
NspI RCATGY 2 cut(s) 1537, 1541
PaeI GCATGC 1 cut(s) 1541
PctI GAATGC 2 cut(s) 626, 1482
PdmI GAANNNNTTC 3 cut(s) 684, 958, 1178
PfeI GAWTC 2 cut(s) 107, 1596
PfoI TCCNGGA 1 cut(s) 1427
PkrI GCNGC 3 cut(s) 88, 332, 1743
PleI GAGTC 1 cut(s) 1309
PpsI GAGTC 1 cut(s) 1309
PsiI TTATAA 2 cut(s) 270, 789
Psp124BI GAGCTC 1 cut(s) 1111
Psp6I CCWGG 1 cut(s) 1427
PspFI CCCAGC 2 cut(s) 79, 198
PspGI CCWGG 1 cut(s) 1427
PspN4I GGNNCC 3 cut(s) 664, 931, 1673
PspPI GGNCC 2 cut(s) 452, 930
PsuI RGATCY 1 cut(s) 1560
RsaI GTAC 4 cut(s) 526, 616, 872, 1673
RsaNI GTAC 4 cut(s) 525, 615, 871, 1672
RseI CAYNNNNRTG 1 cut(s) 1062
SacI GAGCTC 1 cut(s) 1111
SaqAI TTAA 4 cut(s) 59, 948, 1062, 1733
SatI GCNGC 3 cut(s) 87, 331, 1742
Sau3AI GATC 4 cut(s) 178, 1255, 1360, 1560
Sau96I GGNCC 2 cut(s) 452, 930
SchI GAGTC 1 cut(s) 1309
ScrFI CCNGG 2 cut(s) 1429, 1676
SduI GDGCHC 3 cut(s) 1111, 1397, 1656
SfaNI GCATC 5 cut(s) 21, 118, 1241, 1671, 1701
SfcI CTRYAG 4 cut(s) 643, 726, 738, 1465
SmiMI CAYNNNNRTG 1 cut(s) 1062
SmlI CTYRAG 3 cut(s) 691, 857, 1487
SmoI CTYRAG 3 cut(s) 691, 857, 1487
SphI GCATGC 1 cut(s) 1541
SsiI CCGC 4 cut(s) 159, 221, 1072, 1742
SspI AATATT 2 cut(s) 382, 1513
SspMI CTAG 4 cut(s) 1043, 1214, 1301, 1715
SstI GAGCTC 1 cut(s) 1111
StyD4I CCNGG 2 cut(s) 1427, 1674
StyI CCWWGG 1 cut(s) 1524
TaaI ACNGT 4 cut(s) 10, 214, 739, 943
TatI WGTACW 2 cut(s) 524, 614
TauI GCSGC 1 cut(s) 1744
TfiI GAWTC 2 cut(s) 107, 1596
Tru1I TTAA 4 cut(s) 59, 948, 1062, 1733
Tru9I TTAA 4 cut(s) 59, 948, 1062, 1733
TscAI CASTG 5 cut(s) 676, 948, 1146, 1673, 1707
TseI GCWGC 2 cut(s) 86, 330
TspGWI ACGGA 1 cut(s) 143
TspRI CASTG 5 cut(s) 676, 948, 1146, 1673, 1707
XapI RAATTY 8 cut(s) 94, 245, 996, 1019, 1309, 1323, 1618, 1626
XceI RCATGY 2 cut(s) 1537, 1541
XcmI CCANNNNNNNNNTGG 2 cut(s) 561, 1699
XmnI GAANNNNTTC 3 cut(s) 684, 958, 1178
XspI CTAG 4 cut(s) 1043, 1214, 1301, 1715
Zsp2I ATGCAT 2 cut(s) 1539, 1664
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.