MD07G1071300.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr07
OG0000107
Physical Location & Seq
Forward (+)
6730440 .. 6732584
2145 bp
Loading structure...
UTR
Exon/CDS
Intron
MD07G1071300.v1.1.491

Sequence Viewer

Length: 1752 bp
ATGTTGATTTATTTTAGTAAATCCTTCTCCAAAGTGCTTGGGGAAACTCAGAATGGCTGCGAAGAATTGAAGTGCGGGGATCAAGGCCCGCCTGTCCGTTTCCCTTTCATCCTCAAAGATAGACATCCAGATCACTGTGGCTATCCTGGGTTTGTTGTGTCATGCAATGAGAAACAAGAGACGGTTCTCGAGCTTCCAATTCCGGCCAAATTCTCTGTCAAAATCATTGATTATAAGTATCAGGAAGTCCATCTATACGACTCAGATAATTGCTTGCTGGTAAAAGTTTCAGAAATCCTCAACACTTCAATCTCTCCTTTCCACTTCTCAGAAGAGTTTCAGGACAACCTTGCCTTATTCAAATGTTCTTTAGATCTTGAAAGACGACAGTACGTTCACGTTTTAAATGGCACCTGCCTTACCAGCCCCGGCCATCACGTTTATGCCATTGATCCCGACTACGAAATTGATAACCTGCAGTCTTGTACAAAGATACGTAATGTTTTATCAGTTCCATCTTCGGGTGTTCTGAAATGGTCTAAACCACACTGCACAGAATGTGAAGCGGGGGGAAAGAGGTGTATACTGAAGAACAACGGGAACAAAAGCGAAATTGAATGTGTTAACCTGACAAAAGCAAGTGCAACCTTGGGTTCATTCACCTTCTTGCTACTAGTCGTTGCAGTCTCTCAGGTCCATAGCTATGATACAAAGGAAAAAGAAAATCAAATTAAGATTAGAAGATTTTTACAAGATTACAAAGCTCACAAAGCAAGCAGGTATTCCTACGCAGATATTAAGAGGATCACAAACCAATTCCAGGACAAGTTAGGCCAAGGAGCCTATGGAACTGTTTTTAAAGGAAAGCTTTCTTCTGAATGCTTTGTTGCTGTAAAAGTTCTCAATAGTTCCAATGGAAATGGGGAAGATTTCGTAAATGAAGTTGGAACGATGGGACATATCCACCATGTCAATGTGGTTCGCTTGGTTGGTTTCTGTGCTGATGGATTTAACAGAGCTCTTGTTTATGAGTTCTTTGCCAATGGTTCACTGCATGATTTCATTTCATCGGCAGACAATAACAATCGCCTTCTCGGTTGGGACAAGTTGCAAGATATTGCTCTAGCTGTAGCCAAGGGAGTTCAACATCTTCATCAGGGATGTGATCAACGAATCCTCCATTTCGACATCAAACCTCATAATGTATTGTTAGACGATAATTTCACTCAAAAAATTTCGGATTTTGGTTTGGCCAAGTTGTGTTCTAAGGATCAAAGCATAGTGTCCATGACTACAGCTAGAGGGACAATGGGATACATTGCACCTGAAGTGTTCTCCAGGAACTTTGGAAATGTGTCCTATAAGTCGGACGTCTATAGTTTTGGGATGCTGCTCCTTGAGATGGTAGGGGGAAGGAAGAACATTGATTCAACCTCCGAAAACACAAATGAAATTTACTATCCAGAATGGATCTATAATCTTCTAGAAGAAGGAGACGACCTACGAATCCATCTGGGAGAGAAAGGAGATGGTAAAGCTCCAAAGAAACTTGCAATTGTAGGGCTCTGGTGCATCCAGTGGCACCCAGCGGGTCGTCCTTCCATGAACGAGGTTGTTCAGATGTTGGAAGGAGGAGAAAACTTAACCATGCCCCCCAATCCTTTTGCTTCTACCGGTCCTGCACGAGCAAATGCAACTGCGCCTGCGAAAAATCTAAACATTCAGTTAGAAGCTATTGCTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

584

Amino Acids

65.12

Weight (kDa)

6.22

Isoelectric Point (pI)

37.94

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 20 - 87 8.8e-16 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 272 - 542 6.9e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 274 - 540 6.5e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 234
AarI CACCTGC 1 cut(s) 422
AatII GACGTC 1 cut(s) 1374
Acc36I ACCTGC 3 cut(s) 422, 483, 768
AccB1I GGYRCC 2 cut(s) 410, 1581
AccI GTMKAC 1 cut(s) 583
AciI CCGC 4 cut(s) 75, 89, 566, 1589
AclWI GGATC 5 cut(s) 87, 446, 812, 1278, 1478
AcoI YGGCCR 3 cut(s) 204, 430, 1251
AcsI RAATTY 3 cut(s) 209, 1233, 1452
AcuI CTGAAG 2 cut(s) 608, 1347
AcyI GRCGYC 1 cut(s) 1371
AfaI GTAC 2 cut(s) 392, 487
AfiI CCNNNNNNNGG 3 cut(s) 521, 820, 1402
AgeI ACCGGT 1 cut(s) 1673
AgsI TTSAA 7 cut(s) 70, 309, 361, 380, 617, 1145, 1431
AhlI ACTAGT 1 cut(s) 673
AjnI CCWGG 3 cut(s) 145, 819, 1337
AluBI AGCT 9 cut(s) 193, 702, 764, 868, 1019, 1127, 1298, 1538, 1733
AluI AGCT 9 cut(s) 193, 702, 764, 868, 1019, 1127, 1298, 1538, 1733
Alw21I GWGCWC 1 cut(s) 1021
Alw26I GTCTC 3 cut(s) 173, 691, 1488
AlwI GGATC 5 cut(s) 87, 446, 812, 1278, 1478
Ama87I CYCGRG 1 cut(s) 188
AoxI GGCC 5 cut(s) 85, 204, 430, 832, 1251
ApeKI GCWGC 2 cut(s) 57, 1390
ApoI RAATTY 3 cut(s) 209, 1233, 1452
ArsI GACNNNNNNTTYG 2 cut(s) 201, 233
AsiGI ACCGGT 1 cut(s) 1673
Asp700I GAANNNNTTC 2 cut(s) 336, 868
AspLEI GCGC 1 cut(s) 1702
AspS9I GGNCC 3 cut(s) 86, 694, 1676
AsuC2I CCSGG 1 cut(s) 429
AsuHPI GGTGA 1 cut(s) 652
AvaI CYCGRG 1 cut(s) 188
AvaII GGWCC 2 cut(s) 694, 1676
BalI TGGCCA 1 cut(s) 1253
BanI GGYRCC 2 cut(s) 410, 1581
BanII GRGCYC 2 cut(s) 1021, 1566
BauI CACGAG 1 cut(s) 1683
Bbv12I GWGCWC 1 cut(s) 1021
BbvI GCAGC 2 cut(s) 44, 1377
BccI CCATC 8 cut(s) 258, 441, 523, 946, 998, 1396, 1518, 1523
BciT130I CCWGG 3 cut(s) 147, 821, 1339
BciVI GTATCC 1 cut(s) 1307
BclI TGATCA 1 cut(s) 1165
BcnI CCSGG 1 cut(s) 429
BcoDI GTCTC 3 cut(s) 173, 691, 1488
BcuI ACTAGT 1 cut(s) 673
BfaI CTAG 4 cut(s) 674, 1124, 1299, 1484
BfmI CTRYAG 4 cut(s) 476, 1128, 1293, 1375
BfuAI ACCTGC 3 cut(s) 422, 483, 768
BfuI GTATCC 1 cut(s) 1307
BglII AGATCT 1 cut(s) 373
BisI GCNGC 2 cut(s) 58, 1391
BlsI GCNGC 2 cut(s) 59, 1392
Bme1390I CCNGG 4 cut(s) 147, 429, 821, 1339
Bme18I GGWCC 2 cut(s) 694, 1676
BmeT110I CYCGRG 1 cut(s) 188
BmgT120I GGNCC 3 cut(s) 86, 694, 1676
BmiI GGNNCC 3 cut(s) 412, 841, 1583
BmrFI CCNGG 4 cut(s) 147, 429, 821, 1339
BmsI GCATC 2 cut(s) 1377, 1581
BpmI CTGGAG 1 cut(s) 1321
BpuEI CTTGAG 1 cut(s) 1418
BpuMI CCSGG 1 cut(s) 429
BsaAI YACGTR 1 cut(s) 497
BsaBI GATNNNNATC 1 cut(s) 123
BsaHI GRCGYC 1 cut(s) 1371
BsaJI CCNNGG 5 cut(s) 146, 427, 648, 835, 1134
BsaWI WCCGGW 1 cut(s) 1673
BsaXI ACNNNNNCTCC 2 cut(s) 1161, 1191
Bsc4I CCNNNNNNNGG 3 cut(s) 521, 820, 1402
Bse118I RCCGGY 1 cut(s) 1673
Bse1I ACTGG 1 cut(s) 1576
Bse3DI GCAATG 2 cut(s) 172, 1317
Bse8I GATNNNNATC 1 cut(s) 123
BseBI CCWGG 3 cut(s) 147, 821, 1339
BseDI CCNNGG 5 cut(s) 146, 427, 648, 835, 1134
BseGI GGATG 5 cut(s) 108, 124, 1166, 1392, 1572
BseJI GATNNNNATC 1 cut(s) 123
BseLI CCNNNNNNNGG 3 cut(s) 521, 820, 1402
BseMI GCAATG 2 cut(s) 172, 1317
BseMII CTCAG 4 cut(s) 62, 276, 342, 704
BseNI ACTGG 1 cut(s) 1576
BseRI GAGGAG 1 cut(s) 1647
BseXI GCAGC 2 cut(s) 44, 1377
BseYI CCCAGC 1 cut(s) 1585
BsgI GTGCAG 2 cut(s) 535, 1665
BshFI GGCC 5 cut(s) 87, 206, 432, 834, 1253
BshNI GGYRCC 2 cut(s) 410, 1581
BshTI ACCGGT 1 cut(s) 1673
BsiHKAI GWGCWC 1 cut(s) 1021
BsiHKCI CYCGRG 1 cut(s) 188
BsiSI CCGG 3 cut(s) 203, 429, 1674
BslFI GGGAC 3 cut(s) 969, 1115, 1318
BslI CCNNNNNNNGG 3 cut(s) 521, 820, 1402
BsmAI GTCTC 3 cut(s) 173, 691, 1488
BsmBI CGTCTC 2 cut(s) 173, 1488
BsmFI GGGAC 3 cut(s) 969, 1115, 1318
BsmI GAATGC 1 cut(s) 884
BsnI GGCC 5 cut(s) 87, 206, 432, 834, 1253
BsoBI CYCGRG 1 cut(s) 188
Bsp1286I GDGCHC 2 cut(s) 1021, 1566
Bsp1407I TGTACA 1 cut(s) 485
Bsp143I GATC 8 cut(s) 79, 130, 373, 451, 804, 1165, 1270, 1470
BspACI CCGC 4 cut(s) 75, 89, 566, 1589
BspANI GGCC 5 cut(s) 87, 206, 432, 834, 1253
BspCNI CTCAG 4 cut(s) 61, 275, 341, 703
BspLI GGNNCC 3 cut(s) 412, 841, 1583
BspMAI CTGCAG 1 cut(s) 480
BspMI ACCTGC 3 cut(s) 422, 483, 768
BspPI GGATC 5 cut(s) 87, 446, 812, 1278, 1478
BspT107I GGYRCC 2 cut(s) 410, 1581
BsrDI GCAATG 2 cut(s) 172, 1317
BsrFI RCCGGY 1 cut(s) 1673
BsrGI TGTACA 1 cut(s) 485
BsrI ACTGG 1 cut(s) 1576
BssAI RCCGGY 1 cut(s) 1673
BssECI CCNNGG 5 cut(s) 146, 427, 648, 835, 1134
BssMI GATC 8 cut(s) 79, 130, 373, 451, 804, 1165, 1270, 1470
BssNAI GTATAC 1 cut(s) 584
BssNI GRCGYC 1 cut(s) 1371
BssSI CACGAG 1 cut(s) 1683
BssT1I CCWWGG 3 cut(s) 648, 835, 1134
Bst1107I GTATAC 1 cut(s) 584
Bst2BI CACGAG 1 cut(s) 1683
Bst2UI CCWGG 3 cut(s) 147, 821, 1339
Bst4CI ACNGT 4 cut(s) 137, 184, 390, 853
Bst6I CTCTTC 1 cut(s) 327
BstACI GRCGYC 1 cut(s) 1371
BstAUI TGTACA 1 cut(s) 485
BstBAI YACGTR 1 cut(s) 497
BstC8I GCNNGC 4 cut(s) 89, 275, 775, 1704
BstDEI CTNAG 5 cut(s) 48, 262, 328, 690, 1266
BstF5I GGATG 5 cut(s) 108, 124, 1166, 1392, 1572
BstHHI GCGC 1 cut(s) 1702
BstKTI GATC 8 cut(s) 82, 133, 376, 454, 807, 1168, 1273, 1473
BstMAI GTCTC 3 cut(s) 173, 691, 1488
BstMBI GATC 8 cut(s) 79, 130, 373, 451, 804, 1165, 1270, 1470
BstMWI GCNNNNNNNGC 2 cut(s) 423, 770
BstNI CCWGG 3 cut(s) 147, 821, 1339
BstSCI CCNGG 4 cut(s) 145, 427, 819, 1337
BstSFI CTRYAG 4 cut(s) 476, 1128, 1293, 1375
BstSNI TACGTA 1 cut(s) 497
BstV1I GCAGC 2 cut(s) 44, 1377
BstX2I RGATCY 2 cut(s) 373, 1470
BstYI RGATCY 2 cut(s) 373, 1470
BstZ17I GTATAC 1 cut(s) 584
BsuI GTATCC 1 cut(s) 1307
BsuRI GGCC 5 cut(s) 87, 206, 432, 834, 1253
BtsCI GGATG 5 cut(s) 108, 124, 1166, 1392, 1572
BtsI GCAGTG 2 cut(s) 547, 1049
BtsIMutI CAGTG 4 cut(s) 133, 547, 1049, 1583
BveI ACCTGC 3 cut(s) 422, 483, 768
Cac8I GCNNGC 4 cut(s) 89, 275, 775, 1704
CfoI GCGC 1 cut(s) 1702
Cfr10I RCCGGY 1 cut(s) 1673
Cfr13I GGNCC 3 cut(s) 86, 694, 1676
Csp6I GTAC 2 cut(s) 391, 486
CspAI ACCGGT 1 cut(s) 1673
CviAII CATG 6 cut(s) 162, 968, 1055, 1288, 1603, 1648
CviQI GTAC 2 cut(s) 391, 486
DdeI CTNAG 5 cut(s) 48, 262, 328, 690, 1266
DpnI GATC 8 cut(s) 81, 132, 375, 453, 806, 1167, 1272, 1472
DpnII GATC 8 cut(s) 79, 130, 373, 451, 804, 1165, 1270, 1470
DraI TTTAAA 2 cut(s) 405, 859
EaeI YGGCCR 3 cut(s) 204, 430, 1251
Eam1104I CTCTTC 1 cut(s) 327
EarI CTCTTC 1 cut(s) 327
Ecl136II GAGCTC 1 cut(s) 1019
Eco105I TACGTA 1 cut(s) 497
Eco130I CCWWGG 3 cut(s) 648, 835, 1134
Eco24I GRGCYC 2 cut(s) 1021, 1566
Eco47I GGWCC 2 cut(s) 694, 1676
Eco53kI GAGCTC 1 cut(s) 1019
Eco57I CTGAAG 2 cut(s) 608, 1347
Eco88I CYCGRG 1 cut(s) 188
EcoICRI GAGCTC 1 cut(s) 1019
EcoRII CCWGG 3 cut(s) 145, 819, 1337
EcoT14I CCWWGG 3 cut(s) 648, 835, 1134
EcoT38I GRGCYC 2 cut(s) 1021, 1566
ErhI CCWWGG 3 cut(s) 648, 835, 1134
Esp3I CGTCTC 2 cut(s) 173, 1488
FaeI CATG 6 cut(s) 165, 971, 1058, 1291, 1606, 1651
FalI AAGNNNNNCTT 2 cut(s) 852, 884
FaqI GGGAC 3 cut(s) 969, 1115, 1318
FatI CATG 6 cut(s) 161, 967, 1054, 1287, 1602, 1647
FauI CCCGC 4 cut(s) 68, 96, 559, 1582
FbaI TGATCA 1 cut(s) 1165
FblI GTMKAC 1 cut(s) 583
Fnu4HI GCNGC 2 cut(s) 58, 1391
FokI GGATG 5 cut(s) 95, 111, 1173, 1399, 1559
FriOI GRGCYC 2 cut(s) 1021, 1566
Fsp4HI GCNGC 2 cut(s) 58, 1391
FspBI CTAG 4 cut(s) 674, 1124, 1299, 1484
GlaI GCGC 1 cut(s) 1701
GluI GCNGC 2 cut(s) 58, 1391
GsaI CCCAGC 1 cut(s) 1589
GsuI CTGGAG 1 cut(s) 1321
HaeIII GGCC 5 cut(s) 87, 206, 432, 834, 1253
HapII CCGG 3 cut(s) 203, 429, 1674
HhaI GCGC 1 cut(s) 1702
Hin1I GRCGYC 1 cut(s) 1371
Hin1II CATG 6 cut(s) 165, 971, 1058, 1291, 1606, 1651
Hin6I GCGC 1 cut(s) 1700
HinP1I GCGC 1 cut(s) 1700
HincII GTYRAC 1 cut(s) 625
HindII GTYRAC 1 cut(s) 625
HindIII AAGCTT 1 cut(s) 866
HinfI GANTC 4 cut(s) 260, 1173, 1427, 1506
HpaI GTTAAC 1 cut(s) 625
HpaII CCGG 3 cut(s) 203, 429, 1674
HphI GGTGA 1 cut(s) 652
Hpy166II GTNNAC 4 cut(s) 397, 584, 625, 1049
Hpy188III TCNNGA 8 cut(s) 128, 188, 242, 341, 377, 455, 1463, 1484
Hpy8I GTNNAC 4 cut(s) 397, 584, 625, 1049
HpyAV CCTTC 7 cut(s) 34, 673, 1100, 1407, 1484, 1608, 1622
HpyCH4III ACNGT 4 cut(s) 137, 184, 390, 853
HpyCH4IV ACGT 5 cut(s) 393, 399, 438, 496, 1371
HpyF10VI GCNNNNNNNGC 2 cut(s) 423, 770
HpyF3I CTNAG 5 cut(s) 48, 262, 328, 690, 1266
HpySE526I ACGT 5 cut(s) 393, 399, 438, 496, 1371
Hsp92I GRCGYC 1 cut(s) 1371
Hsp92II CATG 6 cut(s) 165, 971, 1058, 1291, 1606, 1651
HspAI GCGC 1 cut(s) 1700
Ksp22I TGATCA 1 cut(s) 1165
KspAI GTTAAC 1 cut(s) 625
Kzo9I GATC 8 cut(s) 79, 130, 373, 451, 804, 1165, 1270, 1470
LmnI GCTCC 3 cut(s) 839, 1398, 1543
Lsp1109I GCAGC 2 cut(s) 44, 1377
LweI GCATC 2 cut(s) 1377, 1581
MaeI CTAG 4 cut(s) 674, 1124, 1299, 1484
MaeII ACGT 5 cut(s) 393, 399, 438, 496, 1371
MalI GATC 8 cut(s) 81, 132, 375, 453, 806, 1167, 1272, 1472
MboI GATC 8 cut(s) 79, 130, 373, 451, 804, 1165, 1270, 1470
MfeI CAATTG 1 cut(s) 1554
MflI RGATCY 2 cut(s) 373, 1470
MhlI GDGCHC 2 cut(s) 1021, 1566
MlsI TGGCCA 1 cut(s) 1253
MluNI TGGCCA 1 cut(s) 1253
MlyI GAGTC 1 cut(s) 254
MmeI TCCRAC 3 cut(s) 925, 1347, 1605
Mox20I TGGCCA 1 cut(s) 1253
MroXI GAANNNNTTC 2 cut(s) 336, 868
MscI TGGCCA 1 cut(s) 1253
MseI TTAA 7 cut(s) 404, 624, 732, 798, 858, 1011, 1643
MslI CAYNNNNRTG 3 cut(s) 441, 702, 972
Msp20I TGGCCA 1 cut(s) 1253
MspA1I CMGCKG 1 cut(s) 1589
MspI CCGG 3 cut(s) 203, 429, 1674
MspR9I CCNGG 4 cut(s) 147, 429, 821, 1339
MunI CAATTG 1 cut(s) 1554
Mva1269I GAATGC 1 cut(s) 884
MvaI CCWGG 3 cut(s) 147, 821, 1339
MwoI GCNNNNNNNGC 2 cut(s) 423, 770
NciI CCSGG 1 cut(s) 429
NdeII GATC 8 cut(s) 79, 130, 373, 451, 804, 1165, 1270, 1470
NlaIII CATG 6 cut(s) 165, 971, 1058, 1291, 1606, 1651
NlaIV GGNNCC 3 cut(s) 412, 841, 1583
PaeR7I CTCGAG 1 cut(s) 188
PaqCI CACCTGC 1 cut(s) 422
PctI GAATGC 1 cut(s) 884
PdmI GAANNNNTTC 2 cut(s) 336, 868
PfeI GAWTC 3 cut(s) 1173, 1427, 1506
PfoI TCCNGGA 2 cut(s) 819, 1337
PinAI ACCGGT 1 cut(s) 1673
PkrI GCNGC 2 cut(s) 59, 1392
PleI GAGTC 1 cut(s) 254
PpsI GAGTC 1 cut(s) 254
Ppu21I YACGTR 1 cut(s) 497
PsiI TTATAA 1 cut(s) 234
Psp124BI GAGCTC 1 cut(s) 1021
Psp6I CCWGG 3 cut(s) 145, 819, 1337
PspFI CCCAGC 1 cut(s) 1585
PspGI CCWGG 3 cut(s) 145, 819, 1337
PspN4I GGNNCC 3 cut(s) 412, 841, 1583
PspPI GGNCC 3 cut(s) 86, 694, 1676
PstI CTGCAG 1 cut(s) 480
PsuI RGATCY 2 cut(s) 373, 1470
RsaI GTAC 2 cut(s) 392, 487
RsaNI GTAC 2 cut(s) 391, 486
RseI CAYNNNNRTG 3 cut(s) 441, 702, 972
SacI GAGCTC 1 cut(s) 1021
SaqAI TTAA 7 cut(s) 404, 624, 732, 798, 858, 1011, 1643
SatI GCNGC 2 cut(s) 58, 1391
Sau3AI GATC 8 cut(s) 79, 130, 373, 451, 804, 1165, 1270, 1470
Sau96I GGNCC 3 cut(s) 86, 694, 1676
SchI GAGTC 1 cut(s) 254
ScrFI CCNGG 4 cut(s) 147, 429, 821, 1339
SduI GDGCHC 2 cut(s) 1021, 1566
SfaNI GCATC 2 cut(s) 1377, 1581
SfcI CTRYAG 4 cut(s) 476, 1128, 1293, 1375
Sfr274I CTCGAG 1 cut(s) 188
SinI GGWCC 2 cut(s) 694, 1676
SlaI CTCGAG 1 cut(s) 188
SmiMI CAYNNNNRTG 3 cut(s) 441, 702, 972
SmlI CTYRAG 2 cut(s) 188, 1397
SmoI CTYRAG 2 cut(s) 188, 1397
SnaBI TACGTA 1 cut(s) 497
SpeI ACTAGT 1 cut(s) 673
SsiI CCGC 4 cut(s) 75, 89, 566, 1589
SspMI CTAG 4 cut(s) 674, 1124, 1299, 1484
SstI GAGCTC 1 cut(s) 1021
StyD4I CCNGG 4 cut(s) 145, 427, 819, 1337
StyI CCWWGG 3 cut(s) 648, 835, 1134
TaaI ACNGT 4 cut(s) 137, 184, 390, 853
TaiI ACGT 5 cut(s) 396, 402, 441, 499, 1374
TaqI TCGA 2 cut(s) 189, 1185
TatI WGTACW 1 cut(s) 485
TfiI GAWTC 3 cut(s) 1173, 1427, 1506
Tru1I TTAA 7 cut(s) 404, 624, 732, 798, 858, 1011, 1643
Tru9I TTAA 7 cut(s) 404, 624, 732, 798, 858, 1011, 1643
TscAI CASTG 4 cut(s) 140, 554, 1056, 1583
TseI GCWGC 2 cut(s) 57, 1390
TspDTI ATGAA 8 cut(s) 97, 645, 954, 1051, 1056, 1142, 1464, 1619
TspGWI ACGGA 1 cut(s) 86
TspRI CASTG 4 cut(s) 140, 554, 1056, 1583
VpaK11BI GGWCC 2 cut(s) 694, 1676
XapI RAATTY 3 cut(s) 209, 1233, 1452
XbaI TCTAGA 1 cut(s) 1483
XcmI CCANNNNNNNNNTGG 1 cut(s) 842
XhoI CTCGAG 1 cut(s) 188
XmiI GTMKAC 1 cut(s) 583
XmnI GAANNNNTTC 2 cut(s) 336, 868
XspI CTAG 4 cut(s) 674, 1124, 1299, 1484
ZraI GACGTC 1 cut(s) 1372
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.