FvH4_7g06020

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000107
Physical Location & Seq
Forward (+)
6207728 .. 6210216
2489 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g06020.t1

Sequence Viewer

Length: 1854 bp
ATGGCCATTATTACTACAGAAATGCAGCAAATGCTAGTCTCTTTGTTCTGCTTCTGTTTTGTTACAATGTCCAAACTGCTGGGAGCTGCCGGAAGTTCTTGCACAGAATCCAAGTGTGGGAATAATGATGGATTAGCCATTCACTACCCTTTCATTCGCGGACAACATTGTGGCTACGATCCTGTTCTTCAATGTACTCAGCCCCATGAAACAGTAGTTGCAGAGAACTCAGTGGTGCTGGTAAAATTCTTTGTCAAACACATAGATTATAAGCATCAGAGAATCCAGCTCAATCAACCAGATGATTGCCTGCTGCTAAAGCCTTTCGACATCACACACATGCCAACTTCTCCCTTCTATTTCCCACAGGATAGGCTGTTCAGCAGCATGAATATTACCCTATATCATTGTCCTACTGTTCCTGTTGAGAGAGAGTATCTAAAGCAAGTCCCTTGCCTCGGTGGCCCTACCGCCCAAGTATACGCCTTTCCTTCAAATTCTGATTTACTTACGTACATGGTATCAGTTAGGTCTTGTACAAAGATGTATGATGTTTTATCACTTCCATTTGGAACTTGGTGGGGAAATAAAGAGGATTTTATACTGAATTGGTCTAAGCCAAATTGTACTGAATGCGAGGCAGAGGGTAAAAGCTGTAGATTGCAGAGGAATGGCACCAACACTGAAGTTGAATGTGTTCACTTGAAGAAACCAAGTGCAACAACAAAATTTGTTGCTACAGGTGCAACTGTGGGTTCATTCGTTCTCTTACTACTGCTCATTCCAGCCTATCGTGCATATAACTCTGACAGAAAGGAAACGGAATTTCAAAGAAAAATTGAACGATTTTTGGAAGATTATAAAGCTCTCAAGCCAAGCAGGTACTCATATGCAGATATCAAGCGAATTACAAATCAATTTAAGGACAAGATAGGAGAAGGAGCCTATGGATCGGTGTTTAAAGGAAATCTTTCTTCTGAACTCTATGTTGCTGTGAAAGTCCTGAAAATTTCAGATGGGAATGGAGAAGAGTTCATAAATGAAGTAGAAACTCTAGGCCATATCCACCATGTTAATGTGGTACGCTTAGTTGGCTTTTGTGCTGATGGATTTGAACGAGCTCTTGTTTATGACTTCTTCCCCAGTGGTTCTCTGCAAGATTTCATATCATCAGCAGATAATAAGAAGGGTTTCTTGGGTTGGGATAAGTTGCAAGATGTTGCTCTAGGCATAGCCAAAGGAATTGAATATCTACATCAAGGATGCGTACAACAAATCCTTCATTTCGATATCAAACCTCATAATGTTTTGCTAGACCAAAATTTGACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCAAAGGATCAAAGTATAGTGTCAATGACTACAGCAAGGGGAACTATGGGCTACGTTGCACCTGAGGTATTCTCCAGGAACTTCGGGAATGTGTCCTATAAGTCAGATGTGTATAGTTATGGAATGGTACTGCTCGAGATGGTAGGAGGAAGAAAGAACATCAGTTCAACCACAGAGAACACAACTGAAGTTTACTACCCAGAATGGATCTATAGTCTACTAGAAGGTGTAGACCTTCGAATCCATGTTGGGGAAGAAGCAGATGCTAAAATTGCAAAGAGACTTGCGATTGTGGGTCTCTGGTGCATCCAATGGCACCCGGTAGATCGTCCCTCTATGAAAGGGGTGGTTCAGATGTTGGAAGGAGGAGAAAAATTAACGATGCCGCCTAATCCTTCCGCAACATCAGGACATAGTAGAGCAAATGATGGAAGCACCCCTAAAAGACCAATGTATCTCGAATTAGAAACAATTACTGAACTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

618

Amino Acids

69.25

Weight (kDa)

6.3

Isoelectric Point (pI)

41.78

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 34 - 98 5.1e-08 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 306 - 574 5.8e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 307 - 573 4.7e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 270, 861
Acc36I ACCTGC 1 cut(s) 870
AccB1I GGYRCC 2 cut(s) 674, 1680
AccI GTMKAC 3 cut(s) 480, 1582, 1596
AccII CGCG 1 cut(s) 159
AciI CCGC 4 cut(s) 159, 471, 1751, 1764
AclWI GGATC 4 cut(s) 173, 958, 1380, 1580
AcoI YGGCCR 2 cut(s) 3, 1353
AcsI RAATTY 7 cut(s) 245, 496, 728, 824, 1008, 1321, 1335
AcuI CTGAAG 2 cut(s) 705, 1572
AfaI GTAC 8 cut(s) 196, 515, 538, 628, 884, 1083, 1269, 1494
AfiI CCNNNNNNNGG 3 cut(s) 117, 458, 1615
AjnI CCWGG 1 cut(s) 1439
AjuI GAANNNNNNNTTGG 2 cut(s) 1178, 1210
AloI GAACNNNNNNTCC 2 cut(s) 362, 394
AluBI AGCT 5 cut(s) 86, 289, 654, 866, 1121
AluI AGCT 5 cut(s) 86, 289, 654, 866, 1121
Alw21I GWGCWC 1 cut(s) 1123
Alw26I GTCTC 3 cut(s) 43, 1639, 1667
AlwI GGATC 4 cut(s) 173, 958, 1380, 1580
Ama87I CYCGRG 1 cut(s) 1499
AoxI GGCC 4 cut(s) 3, 463, 1057, 1353
ApeKI GCWGC 4 cut(s) 25, 86, 313, 384
ApoI RAATTY 7 cut(s) 245, 496, 728, 824, 1008, 1321, 1335
Asp700I GAANNNNTTC 3 cut(s) 696, 970, 1190
AspS9I GGNCC 1 cut(s) 464
AsuC2I CCSGG 1 cut(s) 1685
AsuII TTCGAA 1 cut(s) 1603
AvaI CYCGRG 1 cut(s) 1499
AxyI CCTNAGG 1 cut(s) 1428
BaeI ACNNNNGTAYC 2 cut(s) 1802, 1835
BalI TGGCCA 2 cut(s) 5, 1355
BanI GGYRCC 2 cut(s) 674, 1680
BanII GRGCYC 1 cut(s) 1123
Bbv12I GWGCWC 1 cut(s) 1123
BbvI GCAGC 4 cut(s) 37, 73, 300, 396
BccI CCATC 5 cut(s) 122, 1010, 1100, 1498, 1787
BciT130I CCWGG 1 cut(s) 1441
BcnI CCSGG 1 cut(s) 1685
BcoDI GTCTC 3 cut(s) 43, 1639, 1667
BfaI CTAG 6 cut(s) 35, 1055, 1226, 1313, 1586, 1847
BfmI CTRYAG 5 cut(s) 15, 655, 738, 1395, 1576
BfuAI ACCTGC 1 cut(s) 870
BglI GCCNNNNNGGC 1 cut(s) 462
BisI GCNGC 5 cut(s) 26, 87, 314, 385, 1751
BlsI GCNGC 5 cut(s) 27, 88, 315, 386, 1752
Bme1390I CCNGG 2 cut(s) 1441, 1685
BmeT110I CYCGRG 1 cut(s) 1499
BmgT120I GGNCC 1 cut(s) 464
BmiI GGNNCC 3 cut(s) 676, 943, 1682
BmrFI CCNGG 2 cut(s) 1441, 1685
BmrI ACTGGG 1 cut(s) 1137
BmsI GCATC 5 cut(s) 283, 1253, 1618, 1680, 1737
BmuI ACTGGG 1 cut(s) 1137
BplI GAGNNNNNCTC 2 cut(s) 1421, 1453
BpmI CTGGAG 1 cut(s) 1423
Bpu14I TTCGAA 1 cut(s) 1603
BpuEI CTTGAG 1 cut(s) 854
BpuMI CCSGG 1 cut(s) 1685
BsaAI YACGTR 1 cut(s) 513
BsaI GGTCTC 1 cut(s) 1667
BsaJI CCNNGG 1 cut(s) 457
Bsc4I CCNNNNNNNGG 3 cut(s) 117, 458, 1615
Bse1I ACTGG 1 cut(s) 1143
Bse21I CCTNAGG 1 cut(s) 1428
BseBI CCWGG 1 cut(s) 1441
BseDI CCNNGG 1 cut(s) 457
BseGI GGATG 2 cut(s) 1268, 1671
BseLI CCNNNNNNNGG 3 cut(s) 117, 458, 1615
BseMII CTCAG 3 cut(s) 212, 243, 1419
BseNI ACTGG 1 cut(s) 1143
BseRI GAGGAG 1 cut(s) 1746
BseXI GCAGC 4 cut(s) 37, 73, 300, 396
BseYI CCCAGC 1 cut(s) 79
Bsh1236I CGCG 1 cut(s) 159
BshFI GGCC 4 cut(s) 5, 465, 1059, 1355
BshNI GGYRCC 2 cut(s) 674, 1680
BsiHKAI GWGCWC 1 cut(s) 1123
BsiHKCI CYCGRG 1 cut(s) 1499
BsiSI CCGG 2 cut(s) 90, 1685
BslFI GGGAC 2 cut(s) 434, 1680
BslI CCNNNNNNNGG 3 cut(s) 117, 458, 1615
BsmAI GTCTC 3 cut(s) 43, 1639, 1667
BsmFI GGGAC 2 cut(s) 434, 1680
BsmI GAATGC 1 cut(s) 638
BsnI GGCC 4 cut(s) 5, 465, 1059, 1355
Bso31I GGTCTC 1 cut(s) 1667
BsoBI CYCGRG 1 cut(s) 1499
Bsp119I TTCGAA 1 cut(s) 1603
Bsp1286I GDGCHC 1 cut(s) 1123
Bsp1407I TGTACA 1 cut(s) 536
Bsp143I GATC 5 cut(s) 178, 950, 1372, 1572, 1690
BspACI CCGC 4 cut(s) 159, 471, 1751, 1764
BspANI GGCC 4 cut(s) 5, 465, 1059, 1355
BspCNI CTCAG 3 cut(s) 211, 242, 1420
BspFNI CGCG 1 cut(s) 159
BspLI GGNNCC 3 cut(s) 676, 943, 1682
BspMI ACCTGC 1 cut(s) 870
BspPI GGATC 4 cut(s) 173, 958, 1380, 1580
BspT104I TTCGAA 1 cut(s) 1603
BspT107I GGYRCC 2 cut(s) 674, 1680
BspTNI GGTCTC 1 cut(s) 1667
BsrGI TGTACA 1 cut(s) 536
BsrI ACTGG 1 cut(s) 1143
BssECI CCNNGG 1 cut(s) 457
BssMI GATC 5 cut(s) 178, 950, 1372, 1572, 1690
BssNAI GTATAC 1 cut(s) 481
Bst1107I GTATAC 1 cut(s) 481
Bst2UI CCWGG 1 cut(s) 1441
Bst4CI ACNGT 3 cut(s) 214, 418, 751
Bst6I CTCTTC 1 cut(s) 1023
BstAPI GCANNNNNTGC 1 cut(s) 31
BstAUI TGTACA 1 cut(s) 536
BstBAI YACGTR 1 cut(s) 513
BstBI TTCGAA 1 cut(s) 1603
BstC8I GCNNGC 1 cut(s) 311
BstDEI CTNAG 5 cut(s) 198, 229, 615, 1087, 1428
BstF5I GGATG 2 cut(s) 1268, 1671
BstFNI CGCG 1 cut(s) 159
BstKTI GATC 5 cut(s) 181, 953, 1375, 1575, 1693
BstMAI GTCTC 3 cut(s) 43, 1639, 1667
BstMBI GATC 5 cut(s) 178, 950, 1372, 1572, 1690
BstMWI GCNNNNNNNGC 7 cut(s) 31, 319, 462, 743, 794, 1092, 1637
BstNI CCWGG 1 cut(s) 1441
BstNSI RCATGY 1 cut(s) 343
BstSCI CCNGG 2 cut(s) 1439, 1683
BstSFI CTRYAG 5 cut(s) 15, 655, 738, 1395, 1576
BstSNI TACGTA 1 cut(s) 513
BstUI CGCG 1 cut(s) 159
BstV1I GCAGC 4 cut(s) 37, 73, 300, 396
BstX2I RGATCY 1 cut(s) 1572
BstXI CCANNNNNNTGG 1 cut(s) 79
BstYI RGATCY 1 cut(s) 1572
BstZ17I GTATAC 1 cut(s) 481
Bsu36I CCTNAGG 1 cut(s) 1428
BsuRI GGCC 4 cut(s) 5, 465, 1059, 1355
BtsCI GGATG 2 cut(s) 1268, 1671
BtsIMutI CAGTG 3 cut(s) 237, 681, 1150
BveI ACCTGC 1 cut(s) 870
Cac8I GCNNGC 1 cut(s) 311
Cfr13I GGNCC 1 cut(s) 464
Csp6I GTAC 8 cut(s) 195, 514, 537, 627, 883, 1082, 1268, 1493
CviAII CATG 6 cut(s) 206, 340, 388, 517, 1070, 1610
CviQI GTAC 8 cut(s) 195, 514, 537, 627, 883, 1082, 1268, 1493
DdeI CTNAG 5 cut(s) 198, 229, 615, 1087, 1428
DpnI GATC 5 cut(s) 180, 952, 1374, 1574, 1692
DpnII GATC 5 cut(s) 178, 950, 1372, 1572, 1690
DraI TTTAAA 1 cut(s) 961
EaeI YGGCCR 2 cut(s) 3, 1353
Eam1104I CTCTTC 1 cut(s) 1023
EarI CTCTTC 1 cut(s) 1023
Ecl136II GAGCTC 1 cut(s) 1121
Eco105I TACGTA 1 cut(s) 513
Eco24I GRGCYC 1 cut(s) 1123
Eco31I GGTCTC 1 cut(s) 1667
Eco32I GATATC 2 cut(s) 898, 1291
Eco53kI GAGCTC 1 cut(s) 1121
Eco57I CTGAAG 2 cut(s) 705, 1572
Eco81I CCTNAGG 1 cut(s) 1428
Eco88I CYCGRG 1 cut(s) 1499
EcoICRI GAGCTC 1 cut(s) 1121
EcoRII CCWGG 1 cut(s) 1439
EcoRV GATATC 2 cut(s) 898, 1291
EcoT38I GRGCYC 1 cut(s) 1123
FaeI CATG 6 cut(s) 209, 343, 391, 520, 1073, 1613
FalI AAGNNNNNCTT 4 cut(s) 954, 986, 1178, 1210
FaqI GGGAC 2 cut(s) 434, 1680
FatI CATG 6 cut(s) 205, 339, 387, 516, 1069, 1609
FauNDI CATATG 1 cut(s) 889
FblI GTMKAC 3 cut(s) 480, 1582, 1596
Fnu4HI GCNGC 5 cut(s) 26, 87, 314, 385, 1751
FokI GGATG 2 cut(s) 1275, 1658
FriOI GRGCYC 1 cut(s) 1123
Fsp4HI GCNGC 5 cut(s) 26, 87, 314, 385, 1751
FspBI CTAG 6 cut(s) 35, 1055, 1226, 1313, 1586, 1847
GluI GCNGC 5 cut(s) 26, 87, 314, 385, 1751
GsaI CCCAGC 1 cut(s) 83
GsuI CTGGAG 1 cut(s) 1423
HaeIII GGCC 4 cut(s) 5, 465, 1059, 1355
HapII CCGG 2 cut(s) 90, 1685
Hin1II CATG 6 cut(s) 209, 343, 391, 520, 1073, 1613
HinfI GANTC 4 cut(s) 107, 282, 1327, 1605
HpaII CCGG 2 cut(s) 90, 1685
Hpy166II GTNNAC 5 cut(s) 481, 700, 1558, 1583, 1597
Hpy188I TCNGA 8 cut(s) 279, 502, 808, 979, 1015, 1342, 1471, 1719
Hpy188III TCNNGA 5 cut(s) 1003, 1450, 1501, 1773, 1823
Hpy8I GTNNAC 5 cut(s) 481, 700, 1558, 1583, 1597
HpyAV CCTTC 9 cut(s) 364, 501, 932, 1180, 1289, 1583, 1610, 1721, 1770
HpyCH4III ACNGT 3 cut(s) 214, 418, 751
HpyCH4IV ACGT 2 cut(s) 512, 1419
HpyF10VI GCNNNNNNNGC 7 cut(s) 31, 319, 462, 743, 794, 1092, 1637
HpyF3I CTNAG 5 cut(s) 198, 229, 615, 1087, 1428
HpySE526I ACGT 2 cut(s) 512, 1419
Hsp92II CATG 6 cut(s) 209, 343, 391, 520, 1073, 1613
Kzo9I GATC 5 cut(s) 178, 950, 1372, 1572, 1690
LmnI GCTCC 2 cut(s) 83, 941
Lsp1109I GCAGC 4 cut(s) 37, 73, 300, 396
LweI GCATC 5 cut(s) 283, 1253, 1618, 1680, 1737
MaeI CTAG 6 cut(s) 35, 1055, 1226, 1313, 1586, 1847
MaeII ACGT 2 cut(s) 512, 1419
MaeIII GTNAC 1 cut(s) 61
MalI GATC 5 cut(s) 180, 952, 1374, 1574, 1692
MboI GATC 5 cut(s) 178, 950, 1372, 1572, 1690
MboII GAAGA 8 cut(s) 179, 718, 866, 966, 1040, 1129, 1527, 1631
MflI RGATCY 1 cut(s) 1572
MhlI GDGCHC 1 cut(s) 1123
MlsI TGGCCA 2 cut(s) 5, 1355
MluNI TGGCCA 2 cut(s) 5, 1355
MlyI GAGTC 1 cut(s) 1321
MmeI TCCRAC 1 cut(s) 1704
Mox20I TGGCCA 2 cut(s) 5, 1355
MroXI GAANNNNTTC 3 cut(s) 696, 970, 1190
MscI TGGCCA 2 cut(s) 5, 1355
MseI TTAA 4 cut(s) 921, 960, 1074, 1742
MslI CAYNNNNRTG 2 cut(s) 338, 1074
Msp20I TGGCCA 2 cut(s) 5, 1355
MspI CCGG 2 cut(s) 90, 1685
MspR9I CCNGG 2 cut(s) 1441, 1685
Mva1269I GAATGC 1 cut(s) 638
MvaI CCWGG 1 cut(s) 1441
MvnI CGCG 1 cut(s) 159
MwoI GCNNNNNNNGC 7 cut(s) 31, 319, 462, 743, 794, 1092, 1637
NciI CCSGG 1 cut(s) 1685
NdeI CATATG 1 cut(s) 889
NdeII GATC 5 cut(s) 178, 950, 1372, 1572, 1690
NlaIII CATG 6 cut(s) 209, 343, 391, 520, 1073, 1613
NlaIV GGNNCC 3 cut(s) 676, 943, 1682
NspI RCATGY 1 cut(s) 343
NspV TTCGAA 1 cut(s) 1603
PaeR7I CTCGAG 1 cut(s) 1499
PctI GAATGC 1 cut(s) 638
PdmI GAANNNNTTC 3 cut(s) 696, 970, 1190
PfeI GAWTC 3 cut(s) 107, 282, 1605
PfoI TCCNGGA 1 cut(s) 1439
PkrI GCNGC 5 cut(s) 27, 88, 315, 386, 1752
PleI GAGTC 1 cut(s) 1321
PpsI GAGTC 1 cut(s) 1321
Ppu21I YACGTR 1 cut(s) 513
PsiI TTATAA 2 cut(s) 270, 861
Psp124BI GAGCTC 1 cut(s) 1123
Psp6I CCWGG 1 cut(s) 1439
PspFI CCCAGC 1 cut(s) 79
PspGI CCWGG 1 cut(s) 1439
PspN4I GGNNCC 3 cut(s) 676, 943, 1682
PspPI GGNCC 1 cut(s) 464
PsuI RGATCY 1 cut(s) 1572
RsaI GTAC 8 cut(s) 196, 515, 538, 628, 884, 1083, 1269, 1494
RsaNI GTAC 8 cut(s) 195, 514, 537, 627, 883, 1082, 1268, 1493
RseI CAYNNNNRTG 2 cut(s) 338, 1074
SacI GAGCTC 1 cut(s) 1123
SaqAI TTAA 4 cut(s) 921, 960, 1074, 1742
SatI GCNGC 5 cut(s) 26, 87, 314, 385, 1751
Sau3AI GATC 5 cut(s) 178, 950, 1372, 1572, 1690
Sau96I GGNCC 1 cut(s) 464
SchI GAGTC 1 cut(s) 1321
ScrFI CCNGG 2 cut(s) 1441, 1685
SduI GDGCHC 1 cut(s) 1123
SfaNI GCATC 5 cut(s) 283, 1253, 1618, 1680, 1737
SfcI CTRYAG 5 cut(s) 15, 655, 738, 1395, 1576
Sfr274I CTCGAG 1 cut(s) 1499
SfuI TTCGAA 1 cut(s) 1603
SlaI CTCGAG 1 cut(s) 1499
SmiMI CAYNNNNRTG 2 cut(s) 338, 1074
SmlI CTYRAG 2 cut(s) 869, 1499
SmoI CTYRAG 2 cut(s) 869, 1499
SnaBI TACGTA 1 cut(s) 513
SsiI CCGC 4 cut(s) 159, 471, 1751, 1764
SspI AATATT 1 cut(s) 394
SspMI CTAG 6 cut(s) 35, 1055, 1226, 1313, 1586, 1847
SstI GAGCTC 1 cut(s) 1123
StyD4I CCNGG 2 cut(s) 1439, 1683
TaaI ACNGT 3 cut(s) 214, 418, 751
TaiI ACGT 2 cut(s) 515, 1422
TaqI TCGA 5 cut(s) 327, 1287, 1500, 1603, 1824
TatI WGTACW 3 cut(s) 194, 536, 626
TauI GCSGC 1 cut(s) 1753
TfiI GAWTC 3 cut(s) 107, 282, 1605
Tru1I TTAA 4 cut(s) 921, 960, 1074, 1742
Tru9I TTAA 4 cut(s) 921, 960, 1074, 1742
TscAI CASTG 3 cut(s) 237, 688, 1150
TseI GCWGC 4 cut(s) 25, 86, 313, 384
TspDTI ATGAA 9 cut(s) 142, 222, 404, 747, 1024, 1056, 1153, 1271, 1718
TspGWI ACGGA 1 cut(s) 836
TspRI CASTG 3 cut(s) 237, 688, 1150
XapI RAATTY 7 cut(s) 245, 496, 728, 824, 1008, 1321, 1335
XceI RCATGY 1 cut(s) 343
XcmI CCANNNNNNNNNTGG 1 cut(s) 573
XhoI CTCGAG 1 cut(s) 1499
XmiI GTMKAC 3 cut(s) 480, 1582, 1596
XmnI GAANNNNTTC 3 cut(s) 696, 970, 1190
XspI CTAG 6 cut(s) 35, 1055, 1226, 1313, 1586, 1847
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.