FvH4_7g06000

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
fragaria_vesca
Fvb7
OG0000107
Physical Location & Seq
Forward (+)
6195381 .. 6197645
2265 bp
Loading structure...
UTR
Exon/CDS
Intron
FvH4_7g06000.t2

Sequence Viewer

Length: 1836 bp
ATGCAGCGACTAATCCTCATCTCAGCCTACTGCATATTGATGCCAATAGCTTTCTTCAAAGGGTGCCATAATGCATGCACAGAATCAGAGTGTGGTGACCATGATGATCGTCGACTTGCTATCCATGTCCTGTTCAATCGCCTTCCTCGTTGTCGTGGATTTGAGCTTGGATGTAGTCAGCAGAGCAACAAAACTACTGTCCAGCAGCAGCAGATGGTGGTAAAATTCTTTGTGAAACACATTGATTATAAGCGCCAGAAAATTCAAGTACACATAACGGATGATGGTTGCTTTCTCCTGAAGCAATTAGCAACCCCAAACATGAAACCAATTATCTCTCCTTTCATCTTCTCAGAATCTAGTATGGATAATTTTGTCAGCTTATTTGACTGTCCCGCCCCAAACACAGCTACTGATTCACCACGACTACAAGTCCCCTGCCTCAGTCGCCTGGGCTATAAATATATATATGCCATTCCAAGCAATTACCAACCTCCACAGTACTGTACAAAGATGTATGATTTACCAGTTCCATATGAACTTCTGTATCCTCTGTCTATGGATGCCTATTTTTGGTGGTCTACACCAAATTGTACAGAATGTCAACAGATGGGTAAGAAGTGTCATTTGAAGTTCAACGGCATCGAAAGTGAAATTGAATGTGTTGATTTTAGTAAACCAAGCGCAACAACAAAGTTAGTGGCTACAGGTGCAACTCTGACTACAATCTATCTATTAATTTCGGTGGGTGTAATCTATGGTGTGTATCACTCTGATAAAATGGAAAAACAGAATCAATTGAAAATTGAAACATTCCTAGAGGATCACAAAGCGCTCAAGCCAAGCAGATATTCCTATGCAGATATCAAAAGAATTACGAATCAATTTGAGGATAAATTGGGGGAAGGAGCGTATGGAACTGTTTTCAAAGGGAAGCTTTCATCTGAATTGTTTGTTGCTGTTAAAGTCCTCAAAAACACTAATTACGGAGACGGAGAAGAATTCCTAAATGAGGTGGGAACAATGGGTCATATCCACCATGTCAATGTAGTTCGCTTGGTCGGCTTCTGTGCTGATGGATTCAGACGAGCTCTTGTATATGAGTTCTTACCCAACGGATCACTACAAGATTTCATCTCATCAGCAGACAACAAGAATTCTTTCCTTGGTTGGGATAAGTTGAAAGATATTGCTCTAGGCATTGCCAAAGGAATTGAGTACCTACACCAAGGATGTGATCAACGAATCCTTCATTTTGACATCAAACCTCATAATGTCTTGCTAGATCAAAACTTCACCCCAAAAGTTTCTGATTTTGGGATGTCCAAGCTGTGTGCCAAGGATCAAAGTATAGTTTCAATGACTGCAGCCAGGGGGACTCTGGGTTATATTGCACCAGAAGTGTTCTCCCGGAATTTTGGAAATGTGTCATATAAGTCAGACGTGTATAGTTTTGGAATGGTGTTGCTCGAGATTGTAGGAGGGAGAAAGAATATTGGTGATGAAACCATGGACCAGGCTAGTGAAGTTTACTACCCAGAATGGATATATAATCTTTTAGAAGAAGGGGAGGACCTTCGAGTCCATATCGGAGAAGAAGGATTAGAGTGTCGAATTCCAAAAGAACTAGCCATTGTAGGCCTTTGGTGCATCCAATGGCACCCGATGGATCGTCCATCCATGAAAACAGTGGTTCAGATGTTGGGAGGAAGAGAAAACTTAACCATGCCGCCGAATCCTTTTGCCGCTACGGTTACTACCAGAACAAATGCAAACACCCGCCCGGCTGCAAGACGGTTGAACCTTGAGCTAGAAGCAATTGTTGAATTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

612

Amino Acids

69.21

Weight (kDa)

6.37

Isoelectric Point (pI)

46.52

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 286 - 559 2.5e-45 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 287 - 557 4.3e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 249
AasI GACNNNNNNGTC 1 cut(s) 1580
AccB1I GGYRCC 2 cut(s) 63, 1659
AccI GTMKAC 2 cut(s) 112, 581
AciI CCGC 4 cut(s) 396, 1730, 1746, 1780
AclWI GGATC 4 cut(s) 831, 1126, 1350, 1677
AcsI RAATTY 6 cut(s) 224, 261, 1001, 1156, 1414, 1614
AcuI CTGAAG 1 cut(s) 320
AfaI GTAC 5 cut(s) 270, 503, 508, 595, 1220
AfeI AGCGCT 1 cut(s) 834
AfiI CCNNNNNNNGG 3 cut(s) 573, 1012, 1171
AflIII ACRYGT 1 cut(s) 1443
AhdI GACNNNNNGTC 1 cut(s) 431
AjiI CACGTC 1 cut(s) 1444
AjnI CCWGG 3 cut(s) 450, 1370, 1515
AjuI GAANNNNNNNTTGG 2 cut(s) 835, 867
AluBI AGCT 8 cut(s) 50, 166, 381, 410, 937, 1091, 1330, 1810
AluI AGCT 8 cut(s) 50, 166, 381, 410, 937, 1091, 1330, 1810
Alw21I GWGCWC 1 cut(s) 1093
Alw26I GTCTC 1 cut(s) 984
AlwI GGATC 4 cut(s) 831, 1126, 1350, 1677
AlwNI CAGNNNCTG 1 cut(s) 413
Ama87I CYCGRG 1 cut(s) 1469
Aor51HI AGCGCT 1 cut(s) 834
AoxI GGCC 1 cut(s) 1639
ApeKI GCWGC 5 cut(s) 4, 205, 208, 1367, 1787
ApoI RAATTY 6 cut(s) 224, 261, 1001, 1156, 1414, 1614
ArsI GACNNNNNNTTYG 2 cut(s) 183, 215
AseI ATTAAT 1 cut(s) 737
Asp700I GAANNNNTTC 1 cut(s) 1160
AspLEI GCGC 3 cut(s) 255, 686, 835
AspS9I GGNCC 2 cut(s) 1513, 1573
AsuC2I CCSGG 2 cut(s) 1411, 1784
AsuHPI GGTGA 4 cut(s) 107, 411, 1288, 1511
AvaI CYCGRG 1 cut(s) 1469
AvaII GGWCC 2 cut(s) 1513, 1573
BaeI ACNNNNGTAYC 2 cut(s) 530, 563
BanI GGYRCC 2 cut(s) 63, 1659
BanII GRGCYC 1 cut(s) 1093
Bbv12I GWGCWC 1 cut(s) 1093
BbvI GCAGC 5 cut(s) 16, 217, 220, 1379, 1774
BccI CCATC 6 cut(s) 208, 278, 604, 1070, 1660, 1684
BceAI ACGGC 1 cut(s) 655
BciT130I CCWGG 3 cut(s) 452, 1372, 1517
BciVI GTATCC 1 cut(s) 558
BclI TGATCA 1 cut(s) 1237
BcnI CCSGG 2 cut(s) 1411, 1784
BcoDI GTCTC 1 cut(s) 984
BfaI CTAG 7 cut(s) 360, 818, 1196, 1283, 1521, 1628, 1811
BfmI CTRYAG 2 cut(s) 705, 1365
BfoI RGCGCY 2 cut(s) 256, 836
BfuI GTATCC 1 cut(s) 558
BisI GCNGC 7 cut(s) 5, 206, 209, 1368, 1730, 1746, 1788
BlsI GCNGC 7 cut(s) 6, 207, 210, 1369, 1731, 1747, 1789
BmcAI AGTACT 1 cut(s) 503
Bme1390I CCNGG 5 cut(s) 452, 1372, 1411, 1517, 1784
Bme18I GGWCC 2 cut(s) 1513, 1573
BmeRI GACNNNNNGTC 1 cut(s) 431
BmeT110I CYCGRG 1 cut(s) 1469
BmgBI CACGTC 1 cut(s) 1444
BmgT120I GGNCC 2 cut(s) 1513, 1573
BmiI GGNNCC 2 cut(s) 65, 1661
BmrFI CCNGG 5 cut(s) 452, 1372, 1411, 1517, 1784
BmsI GCATC 4 cut(s) 30, 553, 651, 1659
BpuEI CTTGAG 2 cut(s) 821, 1826
BpuMI CCSGG 2 cut(s) 1411, 1784
BsaJI CCNNGG 6 cut(s) 451, 1165, 1228, 1338, 1371, 1509
Bsc4I CCNNNNNNNGG 3 cut(s) 573, 1012, 1171
Bse1I ACTGG 1 cut(s) 527
Bse3DI GCAATG 1 cut(s) 1200
BseBI CCWGG 3 cut(s) 452, 1372, 1517
BseDI CCNNGG 6 cut(s) 451, 1165, 1228, 1338, 1371, 1509
BseGI GGATG 7 cut(s) 176, 286, 568, 1238, 1326, 1650, 1676
BseLI CCNNNNNNNGG 3 cut(s) 573, 1012, 1171
BseMI GCAATG 1 cut(s) 1200
BseMII CTCAG 3 cut(s) 36, 366, 457
BseNI ACTGG 1 cut(s) 527
BseXI GCAGC 5 cut(s) 16, 217, 220, 1379, 1774
BshFI GGCC 1 cut(s) 1641
BshNI GGYRCC 2 cut(s) 63, 1659
BsiHKAI GWGCWC 1 cut(s) 1093
BsiHKCI CYCGRG 1 cut(s) 1469
BsiSI CCGG 2 cut(s) 1411, 1784
BslFI GGGAC 3 cut(s) 378, 419, 1390
BslI CCNNNNNNNGG 3 cut(s) 573, 1012, 1171
BsmAI GTCTC 1 cut(s) 984
BsmBI CGTCTC 1 cut(s) 984
BsmFI GGGAC 3 cut(s) 378, 419, 1390
BsnI GGCC 1 cut(s) 1641
BsoBI CYCGRG 1 cut(s) 1469
Bsp1286I GDGCHC 1 cut(s) 1093
Bsp1407I TGTACA 2 cut(s) 506, 593
Bsp143I GATC 7 cut(s) 106, 823, 1118, 1237, 1285, 1342, 1669
Bsp19I CCATGG 1 cut(s) 1509
BspACI CCGC 4 cut(s) 396, 1730, 1746, 1780
BspANI GGCC 1 cut(s) 1641
BspCNI CTCAG 3 cut(s) 35, 365, 456
BspLI GGNNCC 2 cut(s) 65, 1661
BspMAI CTGCAG 1 cut(s) 1369
BspPI GGATC 4 cut(s) 831, 1126, 1350, 1677
BspT107I GGYRCC 2 cut(s) 63, 1659
BsrDI GCAATG 1 cut(s) 1200
BsrGI TGTACA 2 cut(s) 506, 593
BsrI ACTGG 1 cut(s) 527
BssECI CCNNGG 6 cut(s) 451, 1165, 1228, 1338, 1371, 1509
BssMI GATC 7 cut(s) 106, 823, 1118, 1237, 1285, 1342, 1669
BssT1I CCWWGG 4 cut(s) 1165, 1228, 1338, 1509
Bst2UI CCWGG 3 cut(s) 452, 1372, 1517
Bst4CI ACNGT 8 cut(s) 199, 392, 501, 506, 922, 1690, 1753, 1797
Bst6I CTCTTC 1 cut(s) 1705
BstAUI TGTACA 2 cut(s) 506, 593
BstC8I GCNNGC 1 cut(s) 76
BstDEI CTNAG 3 cut(s) 22, 352, 443
BstDSI CCRYGG 1 cut(s) 1509
BstEII GGTNACC 1 cut(s) 95
BstENI CCTNNNNNAGG 1 cut(s) 1010
BstF5I GGATG 7 cut(s) 176, 286, 568, 1238, 1326, 1650, 1676
BstH2I RGCGCY 2 cut(s) 256, 836
BstHHI GCGC 3 cut(s) 255, 686, 835
BstKTI GATC 7 cut(s) 109, 826, 1121, 1240, 1288, 1345, 1672
BstMAI GTCTC 1 cut(s) 984
BstMBI GATC 7 cut(s) 106, 823, 1118, 1237, 1285, 1342, 1669
BstMWI GCNNNNNNNGC 4 cut(s) 447, 710, 1062, 1647
BstNI CCWGG 3 cut(s) 452, 1372, 1517
BstNSI RCATGY 1 cut(s) 78
BstPI GGTNACC 1 cut(s) 95
BstSCI CCNGG 5 cut(s) 450, 1370, 1409, 1515, 1782
BstSFI CTRYAG 2 cut(s) 705, 1365
BstV1I GCAGC 5 cut(s) 16, 217, 220, 1379, 1774
BsuI GTATCC 1 cut(s) 558
BsuRI GGCC 1 cut(s) 1641
BtgI CCRYGG 1 cut(s) 1509
BtrI CACGTC 1 cut(s) 1444
BtsCI GGATG 7 cut(s) 176, 286, 568, 1238, 1326, 1650, 1676
BtsIMutI CAGTG 1 cut(s) 1695
Cac8I GCNNGC 1 cut(s) 76
CaiI CAGNNNCTG 1 cut(s) 413
CfoI GCGC 3 cut(s) 255, 686, 835
Cfr13I GGNCC 2 cut(s) 1513, 1573
Csp6I GTAC 5 cut(s) 269, 502, 507, 594, 1219
CspCI CAANNNNNGTGG 2 cut(s) 681, 716
CviAII CATG 8 cut(s) 75, 101, 125, 322, 1040, 1510, 1681, 1726
CviQI GTAC 5 cut(s) 269, 502, 507, 594, 1219
DdeI CTNAG 3 cut(s) 22, 352, 443
DpnI GATC 7 cut(s) 108, 825, 1120, 1239, 1287, 1344, 1671
DpnII GATC 7 cut(s) 106, 823, 1118, 1237, 1285, 1342, 1669
DrdI GACNNNNNNGTC 1 cut(s) 1580
DriI GACNNNNNGTC 1 cut(s) 431
DseDI GACNNNNNNGTC 1 cut(s) 1580
Eam1104I CTCTTC 1 cut(s) 1705
Eam1105I GACNNNNNGTC 1 cut(s) 431
EarI CTCTTC 1 cut(s) 1705
Ecl136II GAGCTC 1 cut(s) 1091
Eco130I CCWWGG 4 cut(s) 1165, 1228, 1338, 1509
Eco147I AGGCCT 1 cut(s) 1641
Eco24I GRGCYC 1 cut(s) 1093
Eco32I GATATC 1 cut(s) 865
Eco47I GGWCC 2 cut(s) 1513, 1573
Eco47III AGCGCT 1 cut(s) 834
Eco53kI GAGCTC 1 cut(s) 1091
Eco57I CTGAAG 1 cut(s) 320
Eco88I CYCGRG 1 cut(s) 1469
Eco91I GGTNACC 1 cut(s) 95
EcoICRI GAGCTC 1 cut(s) 1091
EcoNI CCTNNNNNAGG 1 cut(s) 1010
EcoO109I RGGNCCY 1 cut(s) 1573
EcoO65I GGTNACC 1 cut(s) 95
EcoRI GAATTC 3 cut(s) 1001, 1156, 1614
EcoRII CCWGG 3 cut(s) 450, 1370, 1515
EcoRV GATATC 1 cut(s) 865
EcoT14I CCWWGG 4 cut(s) 1165, 1228, 1338, 1509
EcoT22I ATGCAT 1 cut(s) 76
EcoT38I GRGCYC 1 cut(s) 1093
ErhI CCWWGG 4 cut(s) 1165, 1228, 1338, 1509
Esp3I CGTCTC 1 cut(s) 984
FaeI CATG 8 cut(s) 78, 104, 128, 325, 1043, 1513, 1684, 1729
FalI AAGNNNNNCTT 2 cut(s) 921, 953
FaqI GGGAC 3 cut(s) 378, 419, 1390
FatI CATG 8 cut(s) 74, 100, 124, 321, 1039, 1509, 1680, 1725
FauI CCCGC 2 cut(s) 403, 1787
FauNDI CATATG 1 cut(s) 535
FbaI TGATCA 1 cut(s) 1237
FblI GTMKAC 2 cut(s) 112, 581
Fnu4HI GCNGC 7 cut(s) 5, 206, 209, 1368, 1730, 1746, 1788
FokI GGATG 7 cut(s) 183, 293, 575, 1245, 1333, 1637, 1663
FriOI GRGCYC 1 cut(s) 1093
Fsp4HI GCNGC 7 cut(s) 5, 206, 209, 1368, 1730, 1746, 1788
FspBI CTAG 7 cut(s) 360, 818, 1196, 1283, 1521, 1628, 1811
GlaI GCGC 3 cut(s) 254, 685, 834
GluI GCNGC 7 cut(s) 5, 206, 209, 1368, 1730, 1746, 1788
HaeII RGCGCY 2 cut(s) 256, 836
HaeIII GGCC 1 cut(s) 1641
HapII CCGG 2 cut(s) 1411, 1784
HhaI GCGC 3 cut(s) 255, 686, 835
Hin1II CATG 8 cut(s) 78, 104, 128, 325, 1043, 1513, 1684, 1729
Hin6I GCGC 3 cut(s) 253, 684, 833
HinP1I GCGC 3 cut(s) 253, 684, 833
HincII GTYRAC 2 cut(s) 113, 605
HindII GTYRAC 2 cut(s) 113, 605
HindIII AAGCTT 1 cut(s) 935
HpaII CCGG 2 cut(s) 1411, 1784
HphI GGTGA 4 cut(s) 107, 411, 1288, 1511
Hpy166II GTNNAC 6 cut(s) 113, 271, 582, 605, 677, 1531
Hpy188III TCNNGA 2 cut(s) 298, 1471
Hpy8I GTNNAC 6 cut(s) 113, 271, 582, 605, 677, 1531
Hpy99I CGWCG 1 cut(s) 114
HpyAV CCTTC 6 cut(s) 152, 899, 1259, 1559, 1586, 1592
HpyCH4III ACNGT 8 cut(s) 199, 392, 501, 506, 922, 1690, 1753, 1797
HpyCH4IV ACGT 1 cut(s) 1443
HpyF10VI GCNNNNNNNGC 4 cut(s) 447, 710, 1062, 1647
HpyF3I CTNAG 3 cut(s) 22, 352, 443
HpySE526I ACGT 1 cut(s) 1443
Hsp92II CATG 8 cut(s) 78, 104, 128, 325, 1043, 1513, 1684, 1729
HspAI GCGC 3 cut(s) 253, 684, 833
Ksp22I TGATCA 1 cut(s) 1237
Kzo9I GATC 7 cut(s) 106, 823, 1118, 1237, 1285, 1342, 1669
LmnI GCTCC 1 cut(s) 908
Lsp1109I GCAGC 5 cut(s) 16, 217, 220, 1379, 1774
LweI GCATC 4 cut(s) 30, 553, 651, 1659
MaeI CTAG 7 cut(s) 360, 818, 1196, 1283, 1521, 1628, 1811
MaeII ACGT 1 cut(s) 1443
MaeIII GTNAC 2 cut(s) 95, 1753
MalI GATC 7 cut(s) 108, 825, 1120, 1239, 1287, 1344, 1671
MboI GATC 7 cut(s) 106, 823, 1118, 1237, 1285, 1342, 1669
MboII GAAGA 6 cut(s) 46, 340, 1010, 1574, 1607, 1722
MfeI CAATTG 2 cut(s) 797, 1818
MhlI GDGCHC 1 cut(s) 1093
MlyI GAGTC 2 cut(s) 1372, 1590
Mph1103I ATGCAT 1 cut(s) 76
MroXI GAANNNNTTC 1 cut(s) 1160
MseI TTAA 3 cut(s) 737, 963, 1721
MslI CAYNNNNRTG 2 cut(s) 38, 1044
MspI CCGG 2 cut(s) 1411, 1784
MspR9I CCNGG 5 cut(s) 452, 1372, 1411, 1517, 1784
MunI CAATTG 2 cut(s) 797, 1818
MvaI CCWGG 3 cut(s) 452, 1372, 1517
MwoI GCNNNNNNNGC 4 cut(s) 447, 710, 1062, 1647
NciI CCSGG 2 cut(s) 1411, 1784
NcoI CCATGG 1 cut(s) 1509
NdeI CATATG 1 cut(s) 535
NdeII GATC 7 cut(s) 106, 823, 1118, 1237, 1285, 1342, 1669
NlaIII CATG 8 cut(s) 78, 104, 128, 325, 1043, 1513, 1684, 1729
NlaIV GGNNCC 2 cut(s) 65, 1661
NmuCI GTSAC 1 cut(s) 95
NsiI ATGCAT 1 cut(s) 76
NspI RCATGY 1 cut(s) 78
PaeI GCATGC 1 cut(s) 78
PaeR7I CTCGAG 1 cut(s) 1469
PceI AGGCCT 1 cut(s) 1641
PcsI WCGNNNNNNNCGW 1 cut(s) 145
PdmI GAANNNNTTC 1 cut(s) 1160
PfeI GAWTC 8 cut(s) 83, 356, 416, 793, 880, 1080, 1245, 1735
PfoI TCCNGGA 1 cut(s) 1409
PkrI GCNGC 7 cut(s) 6, 207, 210, 1369, 1731, 1747, 1789
PleI GAGTC 2 cut(s) 1372, 1589
PpsI GAGTC 2 cut(s) 1372, 1589
PpuMI RGGWCCY 1 cut(s) 1573
PshBI ATTAAT 1 cut(s) 737
PsiI TTATAA 1 cut(s) 249
Psp124BI GAGCTC 1 cut(s) 1093
Psp5II RGGWCCY 1 cut(s) 1573
Psp6I CCWGG 3 cut(s) 450, 1370, 1515
PspEI GGTNACC 1 cut(s) 95
PspGI CCWGG 3 cut(s) 450, 1370, 1515
PspN4I GGNNCC 2 cut(s) 65, 1661
PspPI GGNCC 2 cut(s) 1513, 1573
PspPPI RGGWCCY 1 cut(s) 1573
PstI CTGCAG 1 cut(s) 1369
PstNI CAGNNNCTG 1 cut(s) 413
RsaI GTAC 5 cut(s) 270, 503, 508, 595, 1220
RsaNI GTAC 5 cut(s) 269, 502, 507, 594, 1219
RseI CAYNNNNRTG 2 cut(s) 38, 1044
SacI GAGCTC 1 cut(s) 1093
SalI GTCGAC 1 cut(s) 111
SaqAI TTAA 3 cut(s) 737, 963, 1721
SatI GCNGC 7 cut(s) 5, 206, 209, 1368, 1730, 1746, 1788
Sau3AI GATC 7 cut(s) 106, 823, 1118, 1237, 1285, 1342, 1669
Sau96I GGNCC 2 cut(s) 1513, 1573
ScaI AGTACT 1 cut(s) 503
SchI GAGTC 2 cut(s) 1372, 1590
ScrFI CCNGG 5 cut(s) 452, 1372, 1411, 1517, 1784
SduI GDGCHC 1 cut(s) 1093
SfaNI GCATC 4 cut(s) 30, 553, 651, 1659
SfcI CTRYAG 2 cut(s) 705, 1365
Sfr274I CTCGAG 1 cut(s) 1469
SinI GGWCC 2 cut(s) 1513, 1573
SlaI CTCGAG 1 cut(s) 1469
SmiMI CAYNNNNRTG 2 cut(s) 38, 1044
SmlI CTYRAG 3 cut(s) 836, 1469, 1805
SmoI CTYRAG 3 cut(s) 836, 1469, 1805
SphI GCATGC 1 cut(s) 78
SseBI AGGCCT 1 cut(s) 1641
SsiI CCGC 4 cut(s) 396, 1730, 1746, 1780
SspI AATATT 1 cut(s) 1495
SspMI CTAG 7 cut(s) 360, 818, 1196, 1283, 1521, 1628, 1811
SstI GAGCTC 1 cut(s) 1093
StuI AGGCCT 1 cut(s) 1641
StyD4I CCNGG 5 cut(s) 450, 1370, 1409, 1515, 1782
StyI CCWWGG 4 cut(s) 1165, 1228, 1338, 1509
TaaI ACNGT 8 cut(s) 199, 392, 501, 506, 922, 1690, 1753, 1797
TaiI ACGT 1 cut(s) 1446
TaqI TCGA 5 cut(s) 112, 645, 1470, 1579, 1612
TatI WGTACW 4 cut(s) 268, 501, 506, 593
TauI GCSGC 2 cut(s) 1732, 1748
TfiI GAWTC 8 cut(s) 83, 356, 416, 793, 880, 1080, 1245, 1735
Tru1I TTAA 3 cut(s) 737, 963, 1721
Tru9I TTAA 3 cut(s) 737, 963, 1721
TscAI CASTG 1 cut(s) 1695
TseFI GTSAC 1 cut(s) 95
TseI GCWGC 5 cut(s) 4, 205, 208, 1367, 1787
Tsp45I GTSAC 1 cut(s) 95
TspDTI ATGAA 8 cut(s) 334, 338, 552, 930, 1123, 1241, 1518, 1697
TspGWI ACGGA 4 cut(s) 293, 1002, 1008, 1131
TspRI CASTG 1 cut(s) 1695
VpaK11BI GGWCC 2 cut(s) 1513, 1573
VspI ATTAAT 1 cut(s) 737
XagI CCTNNNNNAGG 1 cut(s) 1010
XapI RAATTY 6 cut(s) 224, 261, 1001, 1156, 1414, 1614
XceI RCATGY 1 cut(s) 78
XcmI CCANNNNNNNNNTGG 2 cut(s) 1378, 1687
XhoI CTCGAG 1 cut(s) 1469
XmiI GTMKAC 2 cut(s) 112, 581
XmnI GAANNNNTTC 1 cut(s) 1160
XspI CTAG 7 cut(s) 360, 818, 1196, 1283, 1521, 1628, 1811
ZrmI AGTACT 1 cut(s) 503
Zsp2I ATGCAT 1 cut(s) 76
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.