RchiOBHm_Chr1g0325121

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000107
Physical Location & Seq
Forward (+)
12999100 .. 13001353
2254 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ55487

Sequence Viewer

Length: 1827 bp
ATGCTTCTTTTTTTAGTATACTGGTTGCTTATAGTAGTACATGTACTGCATTGCGGAGCAGGCAGCCTTGAGAATTGTACAGAAACAAGATGCAACCACCTGGGTCCAGCCATCCGATTCCCATTTCGAGTCAAAGGTAGGCAGCCAAGGCATTGCGGTTATAAGGGATTTGATCTATCATGCACCAATGACAACCAGACTCTGCTTGAGATCCCATCGTCAGCTTATAATAAGCTCTTCGTGTATATGATCAACTACACAGATCAGCGAATTAAAATTTATGATCCAAATGGTTGCTTGCGTACTCAGGTTTTGAACCTCAGCTTATCTTCTTCTCCCTTTGAATCTAAATCCAGGGATTGCACCACATTCAGTTGTCCATCGTCAATAGAAAGAGATCGTCATTCCAACATTTCTGGCTGTCTGGTGAAACTGAGCTGTCTTGGCAATAATCCAGGACACCAGATTTTTGCAGTACATTCTTCAGATGATTGCTCCATTGATTCCTTGCCTCTATTGTCTTGTACCAAGGTGCGTGACTACTCATCAGTTCCATCCATTTTGCCGGAGGACAATATTCGGAATTTATCCACCCAAAATGACATTCTGGACTTGTACTGGTCCATACGATCATGTGACTATTGCCAAAGGATGGAGAAGAAATGTCGACTACATTACAAATACCAATCTGTTGGTAGAGAATTTGAATGTTATCTGCCTCTGCCTAAGCCACCTCCACCTAAAGGTTCTCACAATGGAAGGGCAAGCTTAAAGGTACTTGGTATTTCGACACTTTCTGTGGTTGCTATTGCAATGCTGAGTGTGATCTACTATTTTTATAGCTCTAACAAAACAGAAAAAGAAAGTCAGAGGAGAATTGAAAGATATTTGGATGATTACAAAGCTCAAAAGCCAAGTAGATATTCCTATGCTGATATCAAGAGGATTACAAATCAATTCAAGGAAAAGTTGGGCCAAGGGGCCTATGGTTCAGTGTTTAAAGGAACACTTTCTACGGAATTACTTGTTGCTGTGAAGATCCTCAACAATTCAAATGAAAAGGGGGAAGATTTTATAAATGAAGTGGGAACAATGGGTCGAATTCACCATTTAAATGTGGTTCGTATGGTTGGCTTCTGTGCTGATGGATATATTCGAGCTCTTGTTTACGAGTTCTTACCAAATGGTTCACTGCAGAATTTCTTGTCATCGGCTGATGATAAGAGCTCTTTCCTTGGTTGGGATAAGTTGCAAGAAATTGCCTTGGGTATAGCCAAAGGAATTGAATATCTTCACCAAGGGTGTGACCAACGAATCCTCCATTTCGATATCAAACCCCACAATATTTTGTTGGACCAGAATTTTACACCAAAAGTCTCTGATTTTGGTCTAGCAAAGCTGTGCTCTAAGGATCAAAGTGCAATATCCATGACTACAGCGAGGGGGACTATTGGTTACATAGCGCCCGAAGTGTTCTCTAGGAACTTCGGTAATGTCTCCTATAAGTCAGATGTCTATAGTTTTGGAATTTTGTTGCTTGAAATGGTTGGAGGGAGAAAAAATTTCAAAATCATGGAGGACTCCACAAGAGAAGTCTACTTTCCAGAATGGATCTATAATCTTTTAGAACAAGGGAATGACCTACGGATCCATATTGAGGATGAAGGAGATGCTAAGTTTGCTAGAAAACTTGCAATTGTGGGTCTTTGGTGCATTCAATGGCACCCAATAGATCGTCCTTCGATGAAAGTTGTAGTTCAAATGTTGGAAAGAGAAGGTGACAATCTAACCATGCCTCCCAATCCCTTTTCATCCACTTCGAATTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

608

Amino Acids

68.97

Weight (kDa)

8.35

Isoelectric Point (pI)

43.31

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 26 - 95 3.9e-16 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 319 - 588 8.8e-47 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 320 - 587 1.9e-48 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 3 cut(s) 162, 228, 1076
AccB1I GGYRCC 1 cut(s) 1722
AccB7I CCANNNNNTGG 1 cut(s) 652
AccI GTMKAC 3 cut(s) 18, 667, 1596
AciI CCGC 2 cut(s) 54, 156
AclWI GGATC 7 cut(s) 205, 278, 1033, 1419, 1619, 1642, 1655
AcsI RAATTY 8 cut(s) 276, 583, 701, 1101, 1198, 1360, 1527, 1561
AcuI CTGAAG 1 cut(s) 468
AfaI GTAC 8 cut(s) 39, 45, 79, 304, 477, 526, 617, 777
AfiI CCNNNNNNNGG 4 cut(s) 652, 743, 1240, 1657
AflIII ACRYGT 1 cut(s) 40
AjnI CCWGG 3 cut(s) 99, 353, 454
AjuI GAANNNNNNNTTGG 4 cut(s) 588, 620, 907, 939
Alw21I GWGCWC 3 cut(s) 1162, 1229, 1406
Alw26I GTCTC 2 cut(s) 1381, 1501
AlwI GGATC 7 cut(s) 205, 278, 1033, 1419, 1619, 1642, 1655
AlwNI CAGNNNCTG 1 cut(s) 202
AoxI GGCC 2 cut(s) 973, 981
ApeKI GCWGC 2 cut(s) 63, 142
ApoI RAATTY 8 cut(s) 276, 583, 701, 1101, 1198, 1360, 1527, 1561
Asp700I GAANNNNTTC 2 cut(s) 1009, 1290
AspLEI GCGC 1 cut(s) 1465
AspS9I GGNCC 5 cut(s) 104, 621, 973, 981, 1354
AsuHPI GGTGA 4 cut(s) 439, 1097, 1286, 1790
AsuII TTCGAA 1 cut(s) 1820
AvaII GGWCC 3 cut(s) 104, 621, 1354
BamHI GGATCC 1 cut(s) 1647
BanI GGYRCC 1 cut(s) 1722
BanII GRGCYC 2 cut(s) 1162, 1229
Bbv12I GWGCWC 3 cut(s) 1162, 1229, 1406
BbvCI CCTCAGC 1 cut(s) 320
BbvI GCAGC 2 cut(s) 75, 154
BccI CCATC 6 cut(s) 119, 223, 388, 562, 646, 1139
BciT130I CCWGG 3 cut(s) 101, 355, 456
BclI TGATCA 1 cut(s) 249
BcoDI GTCTC 2 cut(s) 1381, 1501
BfaI CTAG 3 cut(s) 1391, 1479, 1683
BfmI CTRYAG 3 cut(s) 1193, 1434, 1516
BfoI RGCGCY 1 cut(s) 1466
BisI GCNGC 2 cut(s) 64, 143
BlsI GCNGC 2 cut(s) 65, 144
Bme1390I CCNGG 3 cut(s) 101, 355, 456
Bme18I GGWCC 3 cut(s) 104, 621, 1354
BmgT120I GGNCC 5 cut(s) 104, 621, 973, 981, 1354
BmiI GGNNCC 4 cut(s) 105, 982, 1649, 1724
BmrFI CCNGG 3 cut(s) 101, 355, 456
BmsI GCATC 2 cut(s) 80, 1660
Bpu10I CCTNAGC 2 cut(s) 320, 726
Bpu14I TTCGAA 1 cut(s) 1820
BpuEI CTTGAG 2 cut(s) 89, 227
BsaJI CCNNGG 8 cut(s) 100, 146, 354, 528, 976, 1234, 1263, 1297
BsaXI ACNNNNNCTCC 4 cut(s) 1302, 1332, 1780, 1810
Bsc4I CCNNNNNNNGG 4 cut(s) 652, 743, 1240, 1657
Bse1I ACTGG 2 cut(s) 26, 623
Bse3DI GCAATG 3 cut(s) 49, 151, 819
BseBI CCWGG 3 cut(s) 101, 355, 456
BseDI CCNNGG 8 cut(s) 100, 146, 354, 528, 976, 1234, 1263, 1297
BseGI GGATG 6 cut(s) 111, 554, 657, 898, 1666, 1811
BseLI CCNNNNNNNGG 4 cut(s) 652, 743, 1240, 1657
BseMI GCAATG 3 cut(s) 49, 151, 819
BseMII CTCAG 4 cut(s) 320, 334, 425, 809
BseNI ACTGG 2 cut(s) 26, 623
BseRI GAGGAG 1 cut(s) 886
BseXI GCAGC 2 cut(s) 75, 154
BshFI GGCC 2 cut(s) 975, 983
BshNI GGYRCC 1 cut(s) 1722
BsiHKAI GWGCWC 3 cut(s) 1162, 1229, 1406
BsiSI CCGG 1 cut(s) 566
BslFI GGGAC 1 cut(s) 1459
BslI CCNNNNNNNGG 4 cut(s) 652, 743, 1240, 1657
BsmAI GTCTC 2 cut(s) 1381, 1501
BsmFI GGGAC 1 cut(s) 1459
BsmI GAATGC 1 cut(s) 1713
BsnI GGCC 2 cut(s) 975, 983
Bsp119I TTCGAA 1 cut(s) 1820
Bsp1286I GDGCHC 3 cut(s) 1162, 1229, 1406
Bsp1407I TGTACA 1 cut(s) 77
BspACI CCGC 2 cut(s) 54, 156
BspANI GGCC 2 cut(s) 975, 983
BspCNI CTCAG 4 cut(s) 319, 333, 426, 810
BspLI GGNNCC 4 cut(s) 105, 982, 1649, 1724
BspMAI CTGCAG 1 cut(s) 1197
BspPI GGATC 7 cut(s) 205, 278, 1033, 1419, 1619, 1642, 1655
BspQI GCTCTTC 1 cut(s) 242
BspT104I TTCGAA 1 cut(s) 1820
BspT107I GGYRCC 1 cut(s) 1722
BsrDI GCAATG 3 cut(s) 49, 151, 819
BsrGI TGTACA 1 cut(s) 77
BsrI ACTGG 2 cut(s) 26, 623
BssECI CCNNGG 8 cut(s) 100, 146, 354, 528, 976, 1234, 1263, 1297
BssNAI GTATAC 1 cut(s) 19
BssT1I CCWWGG 6 cut(s) 146, 528, 976, 1234, 1263, 1297
Bst1107I GTATAC 1 cut(s) 19
Bst2UI CCWGG 3 cut(s) 101, 355, 456
Bst6I CTCTTC 1 cut(s) 242
BstAUI TGTACA 1 cut(s) 77
BstBI TTCGAA 1 cut(s) 1820
BstC8I GCNNGC 3 cut(s) 61, 299, 766
BstDEI CTNAG 7 cut(s) 306, 320, 434, 726, 818, 1407, 1674
BstF5I GGATG 6 cut(s) 111, 554, 657, 898, 1666, 1811
BstH2I RGCGCY 1 cut(s) 1466
BstHHI GCGC 1 cut(s) 1465
BstMAI GTCTC 2 cut(s) 1381, 1501
BstMWI GCNNNNNNNGC 4 cut(s) 60, 148, 444, 1679
BstNI CCWGG 3 cut(s) 101, 355, 456
BstNSI RCATGY 1 cut(s) 44
BstSCI CCNGG 3 cut(s) 99, 353, 454
BstSFI CTRYAG 3 cut(s) 1193, 1434, 1516
BstV1I GCAGC 2 cut(s) 75, 154
BstX2I RGATCY 4 cut(s) 210, 1038, 1611, 1647
BstXI CCANNNNNNTGG 1 cut(s) 692
BstYI RGATCY 4 cut(s) 210, 1038, 1611, 1647
BstZ17I GTATAC 1 cut(s) 19
BsuRI GGCC 2 cut(s) 975, 983
BtsCI GGATG 6 cut(s) 111, 554, 657, 898, 1666, 1811
BtsI GCAGTG 1 cut(s) 1190
BtsIMutI CAGTG 2 cut(s) 999, 1190
Cac8I GCNNGC 3 cut(s) 61, 299, 766
CaiI CAGNNNCTG 1 cut(s) 202
CfoI GCGC 1 cut(s) 1465
Cfr13I GGNCC 5 cut(s) 104, 621, 973, 981, 1354
Csp6I GTAC 8 cut(s) 38, 44, 78, 303, 476, 525, 616, 776
CviAII CATG 6 cut(s) 41, 180, 633, 1429, 1573, 1792
CviQI GTAC 8 cut(s) 38, 44, 78, 303, 476, 525, 616, 776
DdeI CTNAG 7 cut(s) 306, 320, 434, 726, 818, 1407, 1674
DraI TTTAAA 2 cut(s) 1000, 1113
Eam1104I CTCTTC 1 cut(s) 242
EarI CTCTTC 1 cut(s) 242
Ecl136II GAGCTC 2 cut(s) 1160, 1227
Eco130I CCWWGG 6 cut(s) 146, 528, 976, 1234, 1263, 1297
Eco24I GRGCYC 2 cut(s) 1162, 1229
Eco32I GATATC 2 cut(s) 937, 1330
Eco47I GGWCC 3 cut(s) 104, 621, 1354
Eco53kI GAGCTC 2 cut(s) 1160, 1227
Eco57I CTGAAG 1 cut(s) 468
EcoICRI GAGCTC 2 cut(s) 1160, 1227
EcoO109I RGGNCCY 1 cut(s) 981
EcoRI GAATTC 1 cut(s) 1101
EcoRII CCWGG 3 cut(s) 99, 353, 454
EcoRV GATATC 2 cut(s) 937, 1330
EcoT14I CCWWGG 6 cut(s) 146, 528, 976, 1234, 1263, 1297
EcoT38I GRGCYC 2 cut(s) 1162, 1229
ErhI CCWWGG 6 cut(s) 146, 528, 976, 1234, 1263, 1297
FaeI CATG 6 cut(s) 44, 183, 636, 1432, 1576, 1795
FalI AAGNNNNNCTT 2 cut(s) 993, 1025
FaqI GGGAC 1 cut(s) 1459
FatI CATG 6 cut(s) 40, 179, 632, 1428, 1572, 1791
FbaI TGATCA 1 cut(s) 249
FblI GTMKAC 3 cut(s) 18, 667, 1596
Fnu4HI GCNGC 2 cut(s) 64, 143
FokI GGATG 6 cut(s) 98, 541, 664, 905, 1673, 1798
FriOI GRGCYC 2 cut(s) 1162, 1229
Fsp4HI GCNGC 2 cut(s) 64, 143
FspBI CTAG 3 cut(s) 1391, 1479, 1683
GlaI GCGC 1 cut(s) 1464
GluI GCNGC 2 cut(s) 64, 143
HaeII RGCGCY 1 cut(s) 1466
HaeIII GGCC 2 cut(s) 975, 983
HapII CCGG 1 cut(s) 566
HhaI GCGC 1 cut(s) 1465
Hin1II CATG 6 cut(s) 44, 183, 636, 1432, 1576, 1795
Hin6I GCGC 1 cut(s) 1463
HinP1I GCGC 1 cut(s) 1463
HincII GTYRAC 1 cut(s) 668
HindII GTYRAC 1 cut(s) 668
HindIII AAGCTT 1 cut(s) 766
HinfI GANTC 7 cut(s) 117, 129, 199, 344, 503, 1314, 1580
HpaII CCGG 1 cut(s) 566
HphI GGTGA 4 cut(s) 439, 1097, 1286, 1790
Hpy166II GTNNAC 5 cut(s) 19, 668, 1168, 1190, 1597
Hpy188I TCNGA 6 cut(s) 116, 487, 582, 870, 1381, 1510
Hpy188III TCNNGA 3 cut(s) 608, 940, 1604
Hpy8I GTNNAC 5 cut(s) 19, 668, 1168, 1190, 1597
HpyAV CCTTC 4 cut(s) 753, 1658, 1749, 1769
HpyF10VI GCNNNNNNNGC 4 cut(s) 60, 148, 444, 1679
HpyF3I CTNAG 7 cut(s) 306, 320, 434, 726, 818, 1407, 1674
Hsp92II CATG 6 cut(s) 44, 183, 636, 1432, 1576, 1795
HspAI GCGC 1 cut(s) 1463
Ksp22I TGATCA 1 cut(s) 249
LguI GCTCTTC 1 cut(s) 242
LmnI GCTCC 2 cut(s) 56, 500
Lsp1109I GCAGC 2 cut(s) 75, 154
LweI GCATC 2 cut(s) 80, 1660
MaeI CTAG 3 cut(s) 1391, 1479, 1683
MaeIII GTNAC 5 cut(s) 536, 635, 1304, 1454, 1778
MboII GAAGA 8 cut(s) 229, 321, 324, 474, 670, 1048, 1079, 1283
MfeI CAATTG 1 cut(s) 1695
MflI RGATCY 4 cut(s) 210, 1038, 1611, 1647
MhlI GDGCHC 3 cut(s) 1162, 1229, 1406
MlyI GAGTC 3 cut(s) 138, 193, 1574
MmeI TCCRAC 4 cut(s) 432, 1332, 1528, 1746
MroXI GAANNNNTTC 2 cut(s) 1009, 1290
MseI TTAA 4 cut(s) 273, 770, 999, 1112
MslI CAYNNNNRTG 1 cut(s) 1113
MspI CCGG 1 cut(s) 566
MspR9I CCNGG 3 cut(s) 101, 355, 456
MunI CAATTG 1 cut(s) 1695
Mva1269I GAATGC 1 cut(s) 1713
MvaI CCWGG 3 cut(s) 101, 355, 456
MwoI GCNNNNNNNGC 4 cut(s) 60, 148, 444, 1679
NlaIII CATG 6 cut(s) 44, 183, 636, 1432, 1576, 1795
NlaIV GGNNCC 4 cut(s) 105, 982, 1649, 1724
NmuCI GTSAC 4 cut(s) 536, 635, 1304, 1778
NspI RCATGY 1 cut(s) 44
NspV TTCGAA 1 cut(s) 1820
PciI ACATGT 1 cut(s) 40
PciSI GCTCTTC 1 cut(s) 242
PctI GAATGC 1 cut(s) 1713
PdmI GAANNNNTTC 2 cut(s) 1009, 1290
PfeI GAWTC 4 cut(s) 117, 344, 503, 1314
PflMI CCANNNNNTGG 1 cut(s) 652
PfoI TCCNGGA 1 cut(s) 454
PkrI GCNGC 2 cut(s) 65, 144
PleI GAGTC 3 cut(s) 137, 193, 1574
PpsI GAGTC 3 cut(s) 137, 193, 1574
PscI ACATGT 1 cut(s) 40
PsiI TTATAA 3 cut(s) 162, 228, 1076
Psp124BI GAGCTC 2 cut(s) 1162, 1229
Psp6I CCWGG 3 cut(s) 99, 353, 454
PspGI CCWGG 3 cut(s) 99, 353, 454
PspN4I GGNNCC 4 cut(s) 105, 982, 1649, 1724
PspPI GGNCC 5 cut(s) 104, 621, 973, 981, 1354
PsrI GAACNNNNNNTAC 2 cut(s) 997, 1029
PstI CTGCAG 1 cut(s) 1197
PstNI CAGNNNCTG 1 cut(s) 202
PsuI RGATCY 4 cut(s) 210, 1038, 1611, 1647
RsaI GTAC 8 cut(s) 39, 45, 79, 304, 477, 526, 617, 777
RsaNI GTAC 8 cut(s) 38, 44, 78, 303, 476, 525, 616, 776
RseI CAYNNNNRTG 1 cut(s) 1113
SacI GAGCTC 2 cut(s) 1162, 1229
SalI GTCGAC 1 cut(s) 666
SapI GCTCTTC 1 cut(s) 242
SaqAI TTAA 4 cut(s) 273, 770, 999, 1112
SatI GCNGC 2 cut(s) 64, 143
Sau96I GGNCC 5 cut(s) 104, 621, 973, 981, 1354
SchI GAGTC 3 cut(s) 138, 193, 1574
ScrFI CCNGG 3 cut(s) 101, 355, 456
SduI GDGCHC 3 cut(s) 1162, 1229, 1406
SfaNI GCATC 2 cut(s) 80, 1660
SfcI CTRYAG 3 cut(s) 1193, 1434, 1516
SfuI TTCGAA 1 cut(s) 1820
SinI GGWCC 3 cut(s) 104, 621, 1354
SmiI ATTTAAAT 1 cut(s) 1113
SmiMI CAYNNNNRTG 1 cut(s) 1113
SmlI CTYRAG 2 cut(s) 68, 206
SmoI CTYRAG 2 cut(s) 68, 206
SsiI CCGC 2 cut(s) 54, 156
SspI AATATT 2 cut(s) 577, 1345
SspMI CTAG 3 cut(s) 1391, 1479, 1683
SstI GAGCTC 2 cut(s) 1162, 1229
StyD4I CCNGG 3 cut(s) 99, 353, 454
StyI CCWWGG 6 cut(s) 146, 528, 976, 1234, 1263, 1297
SwaI ATTTAAAT 1 cut(s) 1113
TaqI TCGA 8 cut(s) 127, 667, 788, 1099, 1156, 1326, 1742, 1820
TatI WGTACW 5 cut(s) 37, 43, 77, 475, 615
TfiI GAWTC 4 cut(s) 117, 344, 503, 1314
Tru1I TTAA 4 cut(s) 273, 770, 999, 1112
Tru9I TTAA 4 cut(s) 273, 770, 999, 1112
TscAI CASTG 2 cut(s) 999, 1197
TseFI GTSAC 4 cut(s) 536, 635, 1304, 1778
TseI GCWGC 2 cut(s) 63, 142
Tsp45I GTSAC 4 cut(s) 536, 635, 1304, 1778
TspDTI ATGAA 5 cut(s) 1071, 1095, 1677, 1760, 1800
TspGWI ACGGA 2 cut(s) 1031, 1660
TspRI CASTG 2 cut(s) 999, 1197
Van91I CCANNNNNTGG 1 cut(s) 652
VpaK11BI GGWCC 3 cut(s) 104, 621, 1354
XapI RAATTY 8 cut(s) 276, 583, 701, 1101, 1198, 1360, 1527, 1561
XceI RCATGY 1 cut(s) 44
XcmI CCANNNNNNNNNTGG 1 cut(s) 983
XmiI GTMKAC 3 cut(s) 18, 667, 1596
XmnI GAANNNNTTC 2 cut(s) 1009, 1290
XspI CTAG 3 cut(s) 1391, 1479, 1683
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.