Rroxscaffold_1G00033860

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000001
OG0000107
Physical Location & Seq
Forward (+)
48999455 .. 49001753
2299 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_1G00033860.1

Sequence Viewer

Length: 1848 bp
ATGCTTCTAACTATGAGTTTCTTGTTCTGGTTGCTCCTGATATTTGTAGATGTCGATGTTGTTCATGGTGGAGGAGTAGGCCTTGAAGACTGCACCGAAACAAGATGTAGCAGCGAGGGCCCAGCCATCCGGTTCCCATTTCGACTTAAAGGGAGGCAACCAGTCCATTGTGGTTACCCAGGCTTTGATCTTTCATGCACCAACGACAACAAGACACTGCTTGAGATTCCATCATCATCTAAGCTCTCTGTTACAGGGATTAACTACAAATCACAGCTAATTGAAGCAGATCCTGGAGTTGATTGCCTGGCCAGAGACATTTTCTACCACGGTTCTTCTTCTCCCTTCAAACTTGTTGGCAACGCAAGCTTGTTCAGTTGCCCACCATCAGTTGTGAGAGATGAATTTATTACATATTCCTACCCGTCCTTTGGTTGTCTGGCAAGATTGAGCCCTTGCCATAGTAACCCAGGGATTCCAGGCAACCAGATTTATGCTACCTTCCCAGATCCTTTCCCATATCCTGGGAGTTATTGTTCTATTGATAACATACCCCTAGTGTCTTGTACCAAGGTGCATGACTACAAATTTACTCTTGCAAACACATTTGGTATCAGTTATACTGCCAAGTATCTCCACTGGTCCATACCATCTTGTCAACATTGTAAAGAGATGGGCAAGTTATGTCGGCTGAAGAATGAATTCACAAATCAGACAGATCCTCAAACTAAATGCTTGGATGTACCCAAAGCCAAAGGTCACAAACTTGGAGCTCCAACTATAAAGATATTAGGTTCTTGCACACTTTATGTTATTCTTATAGTGACGGGAATGACAATCTACTATGTCTACAGCTCTCTGGAAAGAGAAGAAGAAAATCAGCTGAGAATTAAAAGATTTTTGGATGAATACAGAGCTCTTAAGCCAAGCAGATATTCTTATTCAGATATTAAGAGGATAACAGAGAAGTTCAAGGAGAAGCTGGGTCACGGGTCCTATGGAACTGTGTTTAAAGGTAGGCTTTCCTCTGAATTACTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAGAAAGGGGAAGATTTTATTAACGAAGTGGGCACAATGGGTCAAATCCACCATGTCAATGTGGTACGCTTGATTGGTTACTGTGCTGATGGATTTATACGAGCTCTTGTTTATGAATTCTTACCAAACGGTCCACTCCAGAATTTCTTATCATCAGCAGATAATGAGAGTTCGTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTTTAGGTATAGCGAAAGGAATTGAATATCTTCACCAAGGTTGTGAACAACAAATCCTCCACTTTGACATCAAACCCCATAATGTGTTGCTAGACCATGATTTCACTCCAAAAGTTTCCGATTTTGGTTTAGCCAAGTTGTGCTCTAGGGATCAAAGTGCCGTATCTATGACTGCAGCGAGGGGAACCATGGGCTATATTGCACCAGAAGTCTTCTCTAGGAACTTTGGTAATGTGTCATATAAGGCAGATGTCTATAGTTTTGGAACATTGCTTCTTGAAATGGTGGGGGGCAGAAAGAATTTTAAAGTCATGGAAGACTCCACCAGCCAAGTCTACTTCCCAGAATGGATCTATAACCTCTTAGAACAAGGGAACGACCTTCGCATCCATATTGGGGACGAAGGAAATGTTGAAATTGCTAAGAAACTTGCAGTTGTGGGTCTATGGTGCATCCAATGGTATCCAATAGATCGTCCTTCCATGAAAACAGTAGTTCAAATGTTGGAAAGGGAAGGTGACAATCTGACCATGCCCCTAATCCTTTTGCCTCTACTTCATCTTCGAGTTGAATGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

615

Amino Acids

69.01

Weight (kDa)

6.51

Isoelectric Point (pI)

36.26

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 31 - 94 9.9e-18 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 323 - 593 1.3e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 324 - 591 3.6e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB7I CCANNNNNTGG 1 cut(s) 524
AccI GTMKAC 2 cut(s) 849, 1608
AclWI GGATC 5 cut(s) 284, 503, 713, 1431, 1631
AcoI YGGCCR 1 cut(s) 309
AcsI RAATTY 6 cut(s) 404, 587, 701, 1184, 1210, 1573
AcuI CTGAAG 1 cut(s) 713
AfaI GTAC 3 cut(s) 568, 744, 1134
AfiI CCNNNNNNNGG 4 cut(s) 431, 524, 1252, 1669
AflII CTTAAG 1 cut(s) 920
AjnI CCWGG 6 cut(s) 178, 292, 306, 469, 478, 523
AjuI GAANNNNNNNTTGG 2 cut(s) 919, 951
AloI GAACNNNNNNTCC 4 cut(s) 520, 552, 1311, 1343
AluBI AGCT 9 cut(s) 244, 277, 369, 773, 855, 883, 917, 982, 1172
AluI AGCT 9 cut(s) 244, 277, 369, 773, 855, 883, 917, 982, 1172
Alw21I GWGCWC 4 cut(s) 775, 919, 1174, 1418
Alw26I GTCTC 1 cut(s) 309
AlwI GGATC 5 cut(s) 284, 503, 713, 1431, 1631
AlwNI CAGNNNCTG 1 cut(s) 293
AoxI GGCC 3 cut(s) 79, 118, 309
ApaI GGGCCC 1 cut(s) 122
ApeKI GCWGC 2 cut(s) 111, 1448
ApoI RAATTY 6 cut(s) 404, 587, 701, 1184, 1210, 1573
Asp700I GAANNNNTTC 2 cut(s) 701, 1302
AspS9I GGNCC 5 cut(s) 118, 119, 642, 993, 1199
AsuHPI GGTGA 2 cut(s) 1298, 1802
AvaII GGWCC 3 cut(s) 642, 993, 1199
BaeGI GKGCMC 2 cut(s) 122, 1103
BalI TGGCCA 1 cut(s) 311
BanII GRGCYC 5 cut(s) 122, 455, 775, 919, 1174
BbsI GAAGAC 3 cut(s) 93, 1477, 1596
Bbv12I GWGCWC 4 cut(s) 775, 919, 1174, 1418
BbvI GCAGC 2 cut(s) 123, 1460
BccI CCATC 6 cut(s) 134, 238, 394, 658, 667, 1151
BceAI ACGGC 1 cut(s) 1418
BciT130I CCWGG 6 cut(s) 180, 294, 308, 471, 480, 525
BciVI GTATCC 1 cut(s) 1746
BcoDI GTCTC 1 cut(s) 309
BfaI CTAG 4 cut(s) 557, 1364, 1419, 1491
BfmI CTRYAG 3 cut(s) 850, 1446, 1528
BfrI CTTAAG 1 cut(s) 920
BfuI GTATCC 1 cut(s) 1746
BisI GCNGC 2 cut(s) 112, 1449
BlsI GCNGC 2 cut(s) 113, 1450
Bme1390I CCNGG 6 cut(s) 180, 294, 308, 471, 480, 525
Bme18I GGWCC 3 cut(s) 642, 993, 1199
BmgT120I GGNCC 5 cut(s) 118, 119, 642, 993, 1199
BmiI GGNNCC 4 cut(s) 120, 134, 994, 1459
BmrFI CCNGG 6 cut(s) 180, 294, 308, 471, 480, 525
BmsI GCATC 2 cut(s) 1668, 1734
BpiI GAAGAC 3 cut(s) 93, 1477, 1596
BpmI CTGGAG 2 cut(s) 315, 1190
BpuEI CTTGAG 1 cut(s) 242
BsaJI CCNNGG 9 cut(s) 178, 328, 469, 470, 524, 570, 1246, 1309, 1461
BsaWI WCCGGW 1 cut(s) 129
BsaXI ACNNNNNCTCC 4 cut(s) 520, 550, 1314, 1344
Bsc4I CCNNNNNNNGG 4 cut(s) 431, 524, 1252, 1669
Bse1I ACTGG 2 cut(s) 161, 644
Bse3DI GCAATG 1 cut(s) 1541
BseBI CCWGG 6 cut(s) 180, 294, 308, 471, 480, 525
BseDI CCNNGG 9 cut(s) 178, 328, 469, 470, 524, 570, 1246, 1309, 1461
BseGI GGATG 5 cut(s) 126, 745, 910, 1659, 1725
BseLI CCNNNNNNNGG 4 cut(s) 431, 524, 1252, 1669
BseMI GCAATG 1 cut(s) 1541
BseMII CTCAG 1 cut(s) 875
BseNI ACTGG 2 cut(s) 161, 644
BseRI GAGGAG 1 cut(s) 87
BseSI GKGCMC 2 cut(s) 122, 1103
BseXI GCAGC 2 cut(s) 123, 1460
BseYI CCCAGC 2 cut(s) 121, 982
BsgI GTGCAG 1 cut(s) 76
BshFI GGCC 3 cut(s) 81, 120, 311
BsiHKAI GWGCWC 4 cut(s) 775, 919, 1174, 1418
BsiSI CCGG 1 cut(s) 130
BslFI GGGAC 1 cut(s) 1685
BslI CCNNNNNNNGG 4 cut(s) 431, 524, 1252, 1669
BsmAI GTCTC 1 cut(s) 309
BsmFI GGGAC 1 cut(s) 1685
BsnI GGCC 3 cut(s) 81, 120, 311
Bsp120I GGGCCC 1 cut(s) 118
Bsp1286I GDGCHC 7 cut(s) 122, 455, 775, 919, 1103, 1174, 1418
Bsp143I GATC 7 cut(s) 187, 289, 508, 718, 1423, 1623, 1744
Bsp19I CCATGG 1 cut(s) 1461
BspANI GGCC 3 cut(s) 81, 120, 311
BspCNI CTCAG 1 cut(s) 876
BspLI GGNNCC 4 cut(s) 120, 134, 994, 1459
BspMAI CTGCAG 1 cut(s) 1450
BspPI GGATC 5 cut(s) 284, 503, 713, 1431, 1631
BspTI CTTAAG 1 cut(s) 920
BsrDI GCAATG 1 cut(s) 1541
BsrI ACTGG 2 cut(s) 161, 644
BssECI CCNNGG 9 cut(s) 178, 328, 469, 470, 524, 570, 1246, 1309, 1461
BssMI GATC 7 cut(s) 187, 289, 508, 718, 1423, 1623, 1744
BssT1I CCWWGG 4 cut(s) 570, 1246, 1309, 1461
Bst2UI CCWGG 6 cut(s) 180, 294, 308, 471, 480, 525
Bst4CI ACNGT 5 cut(s) 332, 1006, 1151, 1199, 1765
BstAFI CTTAAG 1 cut(s) 920
BstC8I GCNNGC 1 cut(s) 367
BstDEI CTNAG 4 cut(s) 240, 884, 1636, 1695
BstDSI CCRYGG 2 cut(s) 328, 1461
BstEII GGTNACC 1 cut(s) 173
BstF5I GGATG 5 cut(s) 126, 745, 910, 1659, 1725
BstKTI GATC 7 cut(s) 190, 292, 511, 721, 1426, 1626, 1747
BstMAI GTCTC 1 cut(s) 309
BstMBI GATC 7 cut(s) 187, 289, 508, 718, 1423, 1623, 1744
BstMWI GCNNNNNNNGC 2 cut(s) 117, 366
BstNI CCWGG 6 cut(s) 180, 294, 308, 471, 480, 525
BstPI GGTNACC 1 cut(s) 173
BstSCI CCNGG 6 cut(s) 178, 292, 306, 469, 478, 523
BstSFI CTRYAG 3 cut(s) 850, 1446, 1528
BstSLI GKGCMC 2 cut(s) 122, 1103
BstV1I GCAGC 2 cut(s) 123, 1460
BstV2I GAAGAC 3 cut(s) 93, 1477, 1596
BstX2I RGATCY 4 cut(s) 289, 508, 718, 1623
BstYI RGATCY 4 cut(s) 289, 508, 718, 1623
BsuI GTATCC 1 cut(s) 1746
BsuRI GGCC 3 cut(s) 81, 120, 311
BtgI CCRYGG 2 cut(s) 328, 1461
BtsCI GGATG 5 cut(s) 126, 745, 910, 1659, 1725
BtsI GCAGTG 1 cut(s) 215
BtsIMutI CAGTG 2 cut(s) 215, 637
Cac8I GCNNGC 1 cut(s) 367
CaiI CAGNNNCTG 1 cut(s) 293
Cfr13I GGNCC 5 cut(s) 118, 119, 642, 993, 1199
Csp6I GTAC 3 cut(s) 567, 743, 1133
CviAII CATG 9 cut(s) 65, 195, 578, 1121, 1370, 1462, 1585, 1756, 1804
CviQI GTAC 3 cut(s) 567, 743, 1133
DdeI CTNAG 4 cut(s) 240, 884, 1636, 1695
DpnI GATC 7 cut(s) 189, 291, 510, 720, 1425, 1625, 1746
DpnII GATC 7 cut(s) 187, 289, 508, 718, 1423, 1623, 1744
DraI TTTAAA 2 cut(s) 1012, 1579
EaeI YGGCCR 1 cut(s) 309
Ecl136II GAGCTC 3 cut(s) 773, 917, 1172
Eco130I CCWWGG 4 cut(s) 570, 1246, 1309, 1461
Eco147I AGGCCT 1 cut(s) 81
Eco24I GRGCYC 5 cut(s) 122, 455, 775, 919, 1174
Eco47I GGWCC 3 cut(s) 642, 993, 1199
Eco53kI GAGCTC 3 cut(s) 773, 917, 1172
Eco57I CTGAAG 1 cut(s) 713
Eco91I GGTNACC 1 cut(s) 173
EcoICRI GAGCTC 3 cut(s) 773, 917, 1172
EcoO109I RGGNCCY 2 cut(s) 118, 993
EcoO65I GGTNACC 1 cut(s) 173
EcoRI GAATTC 2 cut(s) 701, 1184
EcoRII CCWGG 6 cut(s) 178, 292, 306, 469, 478, 523
EcoT14I CCWWGG 4 cut(s) 570, 1246, 1309, 1461
EcoT38I GRGCYC 5 cut(s) 122, 455, 775, 919, 1174
ErhI CCWWGG 4 cut(s) 570, 1246, 1309, 1461
FaeI CATG 9 cut(s) 68, 198, 581, 1124, 1373, 1465, 1588, 1759, 1807
FalI AAGNNNNNCTT 2 cut(s) 1005, 1037
FaqI GGGAC 1 cut(s) 1685
FatI CATG 9 cut(s) 64, 194, 577, 1120, 1369, 1461, 1584, 1755, 1803
FblI GTMKAC 2 cut(s) 849, 1608
Fnu4HI GCNGC 2 cut(s) 112, 1449
FokI GGATG 5 cut(s) 113, 752, 917, 1646, 1712
FriOI GRGCYC 5 cut(s) 122, 455, 775, 919, 1174
Fsp4HI GCNGC 2 cut(s) 112, 1449
FspBI CTAG 4 cut(s) 557, 1364, 1419, 1491
GluI GCNGC 2 cut(s) 112, 1449
GsaI CCCAGC 2 cut(s) 125, 986
GsuI CTGGAG 2 cut(s) 315, 1190
HaeIII GGCC 3 cut(s) 81, 120, 311
HapII CCGG 1 cut(s) 130
Hin1II CATG 9 cut(s) 68, 198, 581, 1124, 1373, 1465, 1588, 1759, 1807
HincII GTYRAC 1 cut(s) 659
HindII GTYRAC 1 cut(s) 659
HindIII AAGCTT 1 cut(s) 367
HinfI GANTC 3 cut(s) 226, 475, 1592
HpaII CCGG 1 cut(s) 130
HphI GGTGA 2 cut(s) 1298, 1802
Hpy166II GTNNAC 5 cut(s) 659, 850, 1202, 1319, 1609
Hpy188I TCNGA 5 cut(s) 714, 946, 1030, 1393, 1800
Hpy188III TCNNGA 4 cut(s) 37, 860, 1207, 1550
Hpy8I GTNNAC 5 cut(s) 659, 850, 1202, 1319, 1609
HpyAV CCTTC 6 cut(s) 355, 511, 1664, 1670, 1761, 1781
HpyCH4III ACNGT 5 cut(s) 332, 1006, 1151, 1199, 1765
HpyF10VI GCNNNNNNNGC 2 cut(s) 117, 366
HpyF3I CTNAG 4 cut(s) 240, 884, 1636, 1695
Hsp92II CATG 9 cut(s) 68, 198, 581, 1124, 1373, 1465, 1588, 1759, 1807
Kzo9I GATC 7 cut(s) 187, 289, 508, 718, 1423, 1623, 1744
LmnI GCTCC 3 cut(s) 39, 770, 778
Lsp1109I GCAGC 2 cut(s) 123, 1460
LweI GCATC 2 cut(s) 1668, 1734
MaeI CTAG 4 cut(s) 557, 1364, 1419, 1491
MaeIII GTNAC 8 cut(s) 173, 250, 464, 758, 823, 986, 1145, 1790
MalI GATC 7 cut(s) 189, 291, 510, 720, 1425, 1625, 1746
MboI GATC 7 cut(s) 187, 289, 508, 718, 1423, 1623, 1744
MflI RGATCY 4 cut(s) 289, 508, 718, 1623
MhlI GDGCHC 7 cut(s) 122, 455, 775, 919, 1103, 1174, 1418
MlsI TGGCCA 1 cut(s) 311
MluNI TGGCCA 1 cut(s) 311
MlyI GAGTC 1 cut(s) 1586
MmeI TCCRAC 2 cut(s) 800, 1758
Mox20I TGGCCA 1 cut(s) 311
MroXI GAANNNNTTC 2 cut(s) 701, 1302
MscI TGGCCA 1 cut(s) 311
MseI TTAA 8 cut(s) 147, 261, 891, 921, 951, 1011, 1089, 1578
MslI CAYNNNNRTG 1 cut(s) 1125
Msp20I TGGCCA 1 cut(s) 311
MspA1I CMGCKG 1 cut(s) 883
MspCI CTTAAG 1 cut(s) 920
MspI CCGG 1 cut(s) 130
MspR9I CCNGG 6 cut(s) 180, 294, 308, 471, 480, 525
MvaI CCWGG 6 cut(s) 180, 294, 308, 471, 480, 525
MwoI GCNNNNNNNGC 2 cut(s) 117, 366
NcoI CCATGG 1 cut(s) 1461
NdeII GATC 7 cut(s) 187, 289, 508, 718, 1423, 1623, 1744
NlaIII CATG 9 cut(s) 68, 198, 581, 1124, 1373, 1465, 1588, 1759, 1807
NlaIV GGNNCC 4 cut(s) 120, 134, 994, 1459
NmuCI GTSAC 4 cut(s) 758, 823, 986, 1790
PasI CCCWGGG 1 cut(s) 470
PceI AGGCCT 1 cut(s) 81
PdmI GAANNNNTTC 2 cut(s) 701, 1302
PfeI GAWTC 2 cut(s) 226, 475
PflMI CCANNNNNTGG 1 cut(s) 524
PfoI TCCNGGA 1 cut(s) 292
PkrI GCNGC 2 cut(s) 113, 1450
PleI GAGTC 1 cut(s) 1586
PpsI GAGTC 1 cut(s) 1586
PpuMI RGGWCCY 1 cut(s) 993
Psp124BI GAGCTC 3 cut(s) 775, 919, 1174
Psp5II RGGWCCY 1 cut(s) 993
Psp6I CCWGG 6 cut(s) 178, 292, 306, 469, 478, 523
PspEI GGTNACC 1 cut(s) 173
PspFI CCCAGC 2 cut(s) 121, 982
PspGI CCWGG 6 cut(s) 178, 292, 306, 469, 478, 523
PspN4I GGNNCC 4 cut(s) 120, 134, 994, 1459
PspOMI GGGCCC 1 cut(s) 118
PspPI GGNCC 5 cut(s) 118, 119, 642, 993, 1199
PspPPI RGGWCCY 1 cut(s) 993
PstI CTGCAG 1 cut(s) 1450
PstNI CAGNNNCTG 1 cut(s) 293
PsuI RGATCY 4 cut(s) 289, 508, 718, 1623
PvuII CAGCTG 1 cut(s) 883
RsaI GTAC 3 cut(s) 568, 744, 1134
RsaNI GTAC 3 cut(s) 567, 743, 1133
RseI CAYNNNNRTG 1 cut(s) 1125
SacI GAGCTC 3 cut(s) 775, 919, 1174
SaqAI TTAA 8 cut(s) 147, 261, 891, 921, 951, 1011, 1089, 1578
SatI GCNGC 2 cut(s) 112, 1449
Sau3AI GATC 7 cut(s) 187, 289, 508, 718, 1423, 1623, 1744
Sau96I GGNCC 5 cut(s) 118, 119, 642, 993, 1199
SchI GAGTC 1 cut(s) 1586
ScrFI CCNGG 6 cut(s) 180, 294, 308, 471, 480, 525
SduI GDGCHC 7 cut(s) 122, 455, 775, 919, 1103, 1174, 1418
SfaNI GCATC 2 cut(s) 1668, 1734
SfcI CTRYAG 3 cut(s) 850, 1446, 1528
SinI GGWCC 3 cut(s) 642, 993, 1199
SmiMI CAYNNNNRTG 1 cut(s) 1125
SmlI CTYRAG 2 cut(s) 221, 920
SmoI CTYRAG 2 cut(s) 221, 920
SseBI AGGCCT 1 cut(s) 81
SspMI CTAG 4 cut(s) 557, 1364, 1419, 1491
SstI GAGCTC 3 cut(s) 775, 919, 1174
StuI AGGCCT 1 cut(s) 81
StyD4I CCNGG 6 cut(s) 178, 292, 306, 469, 478, 523
StyI CCWWGG 4 cut(s) 570, 1246, 1309, 1461
TaaI ACNGT 5 cut(s) 332, 1006, 1151, 1199, 1765
TaqI TCGA 3 cut(s) 54, 142, 1837
TfiI GAWTC 2 cut(s) 226, 475
Tru1I TTAA 8 cut(s) 147, 261, 891, 921, 951, 1011, 1089, 1578
Tru9I TTAA 8 cut(s) 147, 261, 891, 921, 951, 1011, 1089, 1578
TscAI CASTG 2 cut(s) 222, 644
TseFI GTSAC 4 cut(s) 758, 823, 986, 1790
TseI GCWGC 2 cut(s) 111, 1448
Tsp45I GTSAC 4 cut(s) 758, 823, 986, 1790
TspDTI ATGAA 8 cut(s) 53, 183, 417, 714, 921, 1197, 1772, 1820
TspRI CASTG 2 cut(s) 222, 644
Van91I CCANNNNNTGG 1 cut(s) 524
Vha464I CTTAAG 1 cut(s) 920
VpaK11BI GGWCC 3 cut(s) 642, 993, 1199
XapI RAATTY 6 cut(s) 404, 587, 701, 1184, 1210, 1573
XmiI GTMKAC 2 cut(s) 849, 1608
XmnI GAANNNNTTC 2 cut(s) 701, 1302
XspI CTAG 4 cut(s) 557, 1364, 1419, 1491
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.