MD02G1252900.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000107
Physical Location & Seq
Forward (+)
30465114 .. 30467036
1923 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1252900.v1.1.491

Sequence Viewer

Length: 1779 bp
ATGCAGAAATTGATCATCTCTTCCTTTTGCATATTGATACTGGTTTTCTTCAAACTAGTTGAAGCAAGTCAATATGTGTGCGCGAAATCCAACTGTAGCAATGATCAAAGCGGGGCTATCCATTTCCCATTAAACATCAGGCGCACACATCATTGTGGTAATTCTGGGCTTGAATGCAATGGGAGATATGAACAGCAAATACTAATAAAATTATTTGTCAAAGACATAGATTACAAGCGTCAGGAAATCCAAGTCTATTCCCCAAGTAACTGCCTGCTGCTAAAGCATGTTGAAATCCCAAACATGCCACCCTCTCCCTTCAACGTGTCAGTCGATGACTACATGAGTAACCTTACCTTATTCAGTTGTCCTACTTCTTTTGCAAGACGAGATACGGATGTGTATCAAGTCCCCTGCCTCGGCGACCGTGGCAAGAGAACTTATGCCATTTATTCTGATTATGGTTTTAGAACTCTCTTCCGGAATCTACAATCTTGTACAAAAATGTATGATGTTTTATCAGTTCCAATACCCTCTGAATATTATGTTCTTCGTTTCAAATGGTCTATACCAAATTGCAGAAAATGTGGAGAGGGAAAGAGGTGTGAATGGCAGAACAATGAAATTAAATGTATTCAATGGAGGAAACCAAGCAACACATGGAAATTAGTGGTCACAGGGGGAATCCTGGGTTCTTTGCTTCTTGTTCTACTGATGATTGCAGCATATCGGGTATATAGCGTTGATAGAAAGAAAAAAGAGATTCGATTACGAATTGAAAGATTCTTGGAGGATTACAAAGCACTCAAACCAAGCAGATACTCGTACGCAGATATTAAGAGGATTACAAATCAATTCAAGGACAAGTTGGGCAAAGGAGCCTATGGAACTGTCTTCAAAGGAATGCTCTCTTCTGAATTCTTTATTGCTGTCAAAGTCCTCAACAGTTCCAAGGGAGATGGGGAAGAGTTCGTAAATGAAGTGCGAACGATGGGTCATATCCACCACGTAAACGTGGCTCGCTTGGTTGGATTTTGTGCTGATGGATTTGTACAAGCTCTTGTTTACGAGTTCTTCCCCATTGGTTCCCTGCAGGATTTCATTTCATCTGCAGATAGTAAGAATTCATTTCTTGGTTGGGATAAGCTGCAAGATATTGCCCTAGGCATAGCCAAAGGAATTGAATATCTTCACCAGGGATGCGATCTACGAATCCTGCATTTCGACATCAAACCCCATAATGTTTTGCTAGACCAAAACTTCACTCCAAAAATTTCTGATTTTGGTATGGCCAAGTTATGTTCCAAGGATCAAAGCTTGGTGTCCATGACTACAGCTAGGGGGACCATGGGCTACATTGCACCTGAAGTGTTCTCCAGGAATTTCGGAAATGTGTCTTACAAGGCAGATGTCTATAGCTTTGGAATGCTGCTGCTTGAGATGGTAGGAGGAAGGAAGAATATTGGTTCAATCACGGATAACACTACAAATGAAATTTACTATCCACAGTGGATTTATAATCTTCTAGGGGAAGGGGATGACCTACGAATCCACATTGGGGAAGAAGGAGACGGTAAAATTTCAAAGAAACTTGCAATTATAGGGCTATGGTGTATCCAGTGGCACCCGTCGGATCGTCCTTCCATGAAAATAGCGGTTCAGATGTTAGAAGGAGGAGGAGAAAGCTTGAGTATGCCGCCTAATCCCTTTGTGCCTACTGGTTCTACAACTAGGAATGCAAGACGCCTAGAGCTAGAAGCTATTGCTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

593

Amino Acids

67.21

Weight (kDa)

8.77

Isoelectric Point (pI)

40.22

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 285 - 550 7.1e-41 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 286 - 554 1.1e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1518
AccB1I GGYRCC 1 cut(s) 1623
AccII CGCG 1 cut(s) 83
AccIII TCCGGA 1 cut(s) 480
AciI CCGC 3 cut(s) 111, 1655, 1697
AclWI GGATC 2 cut(s) 1317, 1641
AcoI YGGCCR 1 cut(s) 1290
AcsI RAATTY 6 cut(s) 917, 1123, 1272, 1381, 1494, 1578
AcuI CTGAAG 1 cut(s) 1386
AcyI GRCGYC 1 cut(s) 1744
AfaI GTAC 3 cut(s) 499, 827, 1053
AfiI CCNNNNNNNGG 2 cut(s) 419, 1558
AflIII ACRYGT 1 cut(s) 324
AhlI ACTAGT 1 cut(s) 55
AjnI CCWGG 3 cut(s) 687, 1194, 1376
AluBI AGCT 8 cut(s) 1058, 1147, 1317, 1337, 1419, 1686, 1753, 1760
AluI AGCT 8 cut(s) 1058, 1147, 1317, 1337, 1419, 1686, 1753, 1760
Alw26I GTCTC 1 cut(s) 1563
AlwI GGATC 2 cut(s) 1317, 1641
Aor13HI TCCGGA 1 cut(s) 480
AoxI GGCC 1 cut(s) 1290
ApeKI GCWGC 5 cut(s) 277, 722, 1147, 1429, 1432
ApoI RAATTY 6 cut(s) 917, 1123, 1272, 1381, 1494, 1578
ArsI GACNNNNNNTTYG 2 cut(s) 979, 1011
Asp700I GAANNNNTTC 1 cut(s) 1188
AspA2I CCTAGG 1 cut(s) 1162
AspLEI GCGC 2 cut(s) 83, 144
AspS9I GGNCC 1 cut(s) 1344
AsuHPI GGTGA 1 cut(s) 1184
AvaII GGWCC 1 cut(s) 1344
AvrII CCTAGG 1 cut(s) 1162
BaeI ACNNNNGTAYC 2 cut(s) 384, 417
BalI TGGCCA 1 cut(s) 1292
BanI GGYRCC 1 cut(s) 1623
BbsI GAAGAC 1 cut(s) 886
BbvI GCAGC 5 cut(s) 264, 734, 1134, 1416, 1419
BccI CCATC 4 cut(s) 953, 985, 1037, 1435
BciT130I CCWGG 3 cut(s) 689, 1196, 1378
BciVI GTATCC 1 cut(s) 1625
BclI TGATCA 2 cut(s) 12, 103
BcoDI GTCTC 1 cut(s) 1563
BcuI ACTAGT 1 cut(s) 55
BfaI CTAG 8 cut(s) 56, 1163, 1250, 1338, 1526, 1731, 1748, 1754
BfmI CTRYAG 5 cut(s) 94, 1091, 1110, 1332, 1414
BfuI GTATCC 1 cut(s) 1625
BisI GCNGC 6 cut(s) 278, 723, 1148, 1430, 1433, 1697
BlnI CCTAGG 1 cut(s) 1162
BlsI GCNGC 6 cut(s) 279, 724, 1149, 1431, 1434, 1698
Bme1390I CCNGG 3 cut(s) 689, 1196, 1378
Bme18I GGWCC 1 cut(s) 1344
BmgT120I GGNCC 1 cut(s) 1344
BmiI GGNNCC 4 cut(s) 880, 1087, 1345, 1625
BmrFI CCNGG 3 cut(s) 689, 1196, 1378
BmsI GCATC 1 cut(s) 1190
BpiI GAAGAC 1 cut(s) 886
BpmI CTGGAG 1 cut(s) 1360
BpuEI CTTGAG 2 cut(s) 1457, 1708
BsaAI YACGTR 1 cut(s) 1009
BsaBI GATNNNNATC 1 cut(s) 402
BsaHI GRCGYC 1 cut(s) 1744
BsaJI CCNNGG 8 cut(s) 418, 427, 688, 951, 1162, 1195, 1305, 1347
BsaWI WCCGGW 1 cut(s) 480
Bsc4I CCNNNNNNNGG 2 cut(s) 419, 1558
Bse1I ACTGG 3 cut(s) 45, 1618, 1723
Bse3DI GCAATG 3 cut(s) 106, 184, 1356
Bse8I GATNNNNATC 1 cut(s) 402
BseAI TCCGGA 1 cut(s) 480
BseBI CCWGG 3 cut(s) 689, 1196, 1378
BseDI CCNNGG 8 cut(s) 418, 427, 688, 951, 1162, 1195, 1305, 1347
BseGI GGATG 3 cut(s) 403, 1205, 1543
BseJI GATNNNNATC 1 cut(s) 402
BseLI CCNNNNNNNGG 2 cut(s) 419, 1558
BseMI GCAATG 3 cut(s) 106, 184, 1356
BseNI ACTGG 3 cut(s) 45, 1618, 1723
BseRI GAGGAG 2 cut(s) 1689, 1692
BseXI GCAGC 5 cut(s) 264, 734, 1134, 1416, 1419
Bsh1236I CGCG 1 cut(s) 83
Bsh1285I CGRYCG 1 cut(s) 427
BshFI GGCC 1 cut(s) 1292
BshNI GGYRCC 1 cut(s) 1623
BsiEI CGRYCG 1 cut(s) 427
BsiSI CCGG 1 cut(s) 481
BsiWI CGTACG 1 cut(s) 825
BslFI GGGAC 2 cut(s) 395, 1357
BslI CCNNNNNNNGG 2 cut(s) 419, 1558
BsmAI GTCTC 1 cut(s) 1563
BsmBI CGTCTC 1 cut(s) 1563
BsmFI GGGAC 2 cut(s) 395, 1357
BsmI GAATGC 4 cut(s) 179, 909, 1431, 1741
BsnI GGCC 1 cut(s) 1292
Bsp13I TCCGGA 1 cut(s) 480
Bsp1407I TGTACA 2 cut(s) 497, 1051
Bsp143I GATC 5 cut(s) 12, 103, 1204, 1309, 1633
Bsp19I CCATGG 1 cut(s) 1347
BspACI CCGC 3 cut(s) 111, 1655, 1697
BspANI GGCC 1 cut(s) 1292
BspEI TCCGGA 1 cut(s) 480
BspFNI CGCG 1 cut(s) 83
BspLI GGNNCC 4 cut(s) 880, 1087, 1345, 1625
BspMAI CTGCAG 2 cut(s) 1095, 1114
BspPI GGATC 2 cut(s) 1317, 1641
BspT107I GGYRCC 1 cut(s) 1623
BsrDI GCAATG 3 cut(s) 106, 184, 1356
BsrGI TGTACA 2 cut(s) 497, 1051
BsrI ACTGG 3 cut(s) 45, 1618, 1723
BssECI CCNNGG 8 cut(s) 418, 427, 688, 951, 1162, 1195, 1305, 1347
BssMI GATC 5 cut(s) 12, 103, 1204, 1309, 1633
BssNI GRCGYC 1 cut(s) 1744
BssT1I CCWWGG 4 cut(s) 951, 1162, 1305, 1347
Bst2UI CCWGG 3 cut(s) 689, 1196, 1378
Bst4CI ACNGT 6 cut(s) 95, 428, 892, 947, 1509, 1574
Bst6I CTCTTC 4 cut(s) 25, 482, 916, 960
BstACI GRCGYC 1 cut(s) 1744
BstAUI TGTACA 2 cut(s) 497, 1051
BstBAI YACGTR 1 cut(s) 1009
BstC8I GCNNGC 2 cut(s) 275, 1021
BstDSI CCRYGG 2 cut(s) 427, 1347
BstF5I GGATG 3 cut(s) 403, 1205, 1543
BstFNI CGCG 1 cut(s) 83
BstHHI GCGC 2 cut(s) 83, 144
BstKTI GATC 5 cut(s) 15, 106, 1207, 1312, 1636
BstMAI GTCTC 1 cut(s) 1563
BstMBI GATC 5 cut(s) 12, 103, 1204, 1309, 1633
BstMCI CGRYCG 1 cut(s) 427
BstMWI GCNNNNNNNGC 2 cut(s) 283, 429
BstNI CCWGG 3 cut(s) 689, 1196, 1378
BstNSI RCATGY 2 cut(s) 290, 307
BstSCI CCNGG 3 cut(s) 687, 1194, 1376
BstSFI CTRYAG 5 cut(s) 94, 1091, 1110, 1332, 1414
BstUI CGCG 1 cut(s) 83
BstV1I GCAGC 5 cut(s) 264, 734, 1134, 1416, 1419
BstV2I GAAGAC 1 cut(s) 886
BsuI GTATCC 1 cut(s) 1625
BsuRI GGCC 1 cut(s) 1292
BtgI CCRYGG 2 cut(s) 427, 1347
BtsCI GGATG 3 cut(s) 403, 1205, 1543
BtsIMutI CAGTG 2 cut(s) 1514, 1625
Cac8I GCNNGC 2 cut(s) 275, 1021
CfoI GCGC 2 cut(s) 83, 144
Cfr13I GGNCC 1 cut(s) 1344
CseI GACGC 2 cut(s) 227, 1752
Csp6I GTAC 3 cut(s) 498, 826, 1052
CviAII CATG 7 cut(s) 287, 304, 343, 660, 1327, 1348, 1645
CviQI GTAC 3 cut(s) 498, 826, 1052
DpnI GATC 5 cut(s) 14, 105, 1206, 1311, 1635
DpnII GATC 5 cut(s) 12, 103, 1204, 1309, 1633
EaeI YGGCCR 1 cut(s) 1290
Eam1104I CTCTTC 4 cut(s) 25, 482, 916, 960
EarI CTCTTC 4 cut(s) 25, 482, 916, 960
Eco130I CCWWGG 4 cut(s) 951, 1162, 1305, 1347
Eco47I GGWCC 1 cut(s) 1344
Eco57I CTGAAG 1 cut(s) 1386
EcoRI GAATTC 2 cut(s) 917, 1123
EcoRII CCWGG 3 cut(s) 687, 1194, 1376
EcoT14I CCWWGG 4 cut(s) 951, 1162, 1305, 1347
ErhI CCWWGG 4 cut(s) 951, 1162, 1305, 1347
Esp3I CGTCTC 1 cut(s) 1563
FaeI CATG 7 cut(s) 290, 307, 346, 663, 1330, 1351, 1648
FaqI GGGAC 2 cut(s) 395, 1357
FatI CATG 7 cut(s) 286, 303, 342, 659, 1326, 1347, 1644
FauI CCCGC 1 cut(s) 104
FbaI TGATCA 2 cut(s) 12, 103
Fnu4HI GCNGC 6 cut(s) 278, 723, 1148, 1430, 1433, 1697
FokI GGATG 3 cut(s) 410, 1212, 1550
Fsp4HI GCNGC 6 cut(s) 278, 723, 1148, 1430, 1433, 1697
FspBI CTAG 8 cut(s) 56, 1163, 1250, 1338, 1526, 1731, 1748, 1754
GlaI GCGC 2 cut(s) 82, 143
GluI GCNGC 6 cut(s) 278, 723, 1148, 1430, 1433, 1697
GsuI CTGGAG 1 cut(s) 1360
HaeIII GGCC 1 cut(s) 1292
HapII CCGG 1 cut(s) 481
HgaI GACGC 2 cut(s) 227, 1752
HhaI GCGC 2 cut(s) 83, 144
Hin1I GRCGYC 1 cut(s) 1744
Hin1II CATG 7 cut(s) 290, 307, 346, 663, 1330, 1351, 1648
Hin6I GCGC 2 cut(s) 81, 142
HinP1I GCGC 2 cut(s) 81, 142
HindIII AAGCTT 2 cut(s) 1315, 1684
HinfI GANTC 6 cut(s) 484, 684, 763, 783, 1212, 1548
HpaII CCGG 1 cut(s) 481
HphI GGTGA 1 cut(s) 1184
Hpy166II GTNNAC 2 cut(s) 1012, 1066
Hpy188I TCNGA 7 cut(s) 457, 538, 916, 1279, 1388, 1633, 1662
Hpy188III TCNNGA 2 cut(s) 242, 481
Hpy8I GTNNAC 2 cut(s) 1012, 1066
Hpy99I CGWCG 1 cut(s) 1633
HpyAV CCTTC 6 cut(s) 328, 1446, 1526, 1559, 1650, 1664
HpyCH4III ACNGT 6 cut(s) 95, 428, 892, 947, 1509, 1574
HpyCH4IV ACGT 3 cut(s) 324, 1008, 1014
HpyF10VI GCNNNNNNNGC 2 cut(s) 283, 429
HpySE526I ACGT 3 cut(s) 324, 1008, 1014
Hsp92I GRCGYC 1 cut(s) 1744
Hsp92II CATG 7 cut(s) 290, 307, 346, 663, 1330, 1351, 1648
HspAI GCGC 2 cut(s) 81, 142
Kpn2I TCCGGA 1 cut(s) 480
Ksp22I TGATCA 2 cut(s) 12, 103
Kzo9I GATC 5 cut(s) 12, 103, 1204, 1309, 1633
LmnI GCTCC 1 cut(s) 878
Lsp1109I GCAGC 5 cut(s) 264, 734, 1134, 1416, 1419
LweI GCATC 1 cut(s) 1190
MaeI CTAG 8 cut(s) 56, 1163, 1250, 1338, 1526, 1731, 1748, 1754
MaeII ACGT 3 cut(s) 324, 1008, 1014
MaeIII GTNAC 3 cut(s) 266, 347, 673
MalI GATC 5 cut(s) 14, 105, 1206, 1311, 1635
MboI GATC 5 cut(s) 12, 103, 1204, 1309, 1633
MlsI TGGCCA 1 cut(s) 1292
MluNI TGGCCA 1 cut(s) 1292
MmeI TCCRAC 3 cut(s) 114, 1009, 1611
Mox20I TGGCCA 1 cut(s) 1292
MroI TCCGGA 1 cut(s) 480
MroXI GAANNNNTTC 1 cut(s) 1188
MscI TGGCCA 1 cut(s) 1292
MseI TTAA 3 cut(s) 131, 627, 837
MslI CAYNNNNRTG 1 cut(s) 153
Msp20I TGGCCA 1 cut(s) 1292
MspI CCGG 1 cut(s) 481
MspR9I CCNGG 3 cut(s) 689, 1196, 1378
Mva1269I GAATGC 4 cut(s) 179, 909, 1431, 1741
MvaI CCWGG 3 cut(s) 689, 1196, 1378
MvnI CGCG 1 cut(s) 83
MwoI GCNNNNNNNGC 2 cut(s) 283, 429
NcoI CCATGG 1 cut(s) 1347
NdeII GATC 5 cut(s) 12, 103, 1204, 1309, 1633
NlaIII CATG 7 cut(s) 290, 307, 346, 663, 1330, 1351, 1648
NlaIV GGNNCC 4 cut(s) 880, 1087, 1345, 1625
NmeAIII GCCGAG 1 cut(s) 399
NmuCI GTSAC 1 cut(s) 673
NspI RCATGY 2 cut(s) 290, 307
PcsI WCGNNNNNNNCGW 1 cut(s) 330
PctI GAATGC 4 cut(s) 179, 909, 1431, 1741
PdmI GAANNNNTTC 1 cut(s) 1188
PfeI GAWTC 6 cut(s) 484, 684, 763, 783, 1212, 1548
Pfl23II CGTACG 1 cut(s) 825
PfoI TCCNGGA 1 cut(s) 1376
PkrI GCNGC 6 cut(s) 279, 724, 1149, 1431, 1434, 1698
Ppu21I YACGTR 1 cut(s) 1009
PsiI TTATAA 1 cut(s) 1518
Psp6I CCWGG 3 cut(s) 687, 1194, 1376
PspGI CCWGG 3 cut(s) 687, 1194, 1376
PspLI CGTACG 1 cut(s) 825
PspN4I GGNNCC 4 cut(s) 880, 1087, 1345, 1625
PspPI GGNCC 1 cut(s) 1344
PsrI GAACNNNNNNTAC 2 cut(s) 183, 215
PstI CTGCAG 2 cut(s) 1095, 1114
RsaI GTAC 3 cut(s) 499, 827, 1053
RsaNI GTAC 3 cut(s) 498, 826, 1052
RseI CAYNNNNRTG 1 cut(s) 153
SaqAI TTAA 3 cut(s) 131, 627, 837
SatI GCNGC 6 cut(s) 278, 723, 1148, 1430, 1433, 1697
Sau3AI GATC 5 cut(s) 12, 103, 1204, 1309, 1633
Sau96I GGNCC 1 cut(s) 1344
SbfI CCTGCAGG 1 cut(s) 1095
ScrFI CCNGG 3 cut(s) 689, 1196, 1378
SdaI CCTGCAGG 1 cut(s) 1095
SfaNI GCATC 1 cut(s) 1190
SfcI CTRYAG 5 cut(s) 94, 1091, 1110, 1332, 1414
SinI GGWCC 1 cut(s) 1344
SmiMI CAYNNNNRTG 1 cut(s) 153
SmlI CTYRAG 2 cut(s) 1436, 1687
SmoI CTYRAG 2 cut(s) 1436, 1687
SpeI ACTAGT 1 cut(s) 55
Sse8387I CCTGCAGG 1 cut(s) 1095
SsiI CCGC 3 cut(s) 111, 1655, 1697
SspI AATATT 2 cut(s) 542, 1462
SspMI CTAG 8 cut(s) 56, 1163, 1250, 1338, 1526, 1731, 1748, 1754
StyD4I CCNGG 3 cut(s) 687, 1194, 1376
StyI CCWWGG 4 cut(s) 951, 1162, 1305, 1347
TaaI ACNGT 6 cut(s) 95, 428, 892, 947, 1509, 1574
TaiI ACGT 3 cut(s) 327, 1011, 1017
TaqI TCGA 3 cut(s) 333, 766, 1224
TatI WGTACW 2 cut(s) 497, 1051
TauI GCSGC 1 cut(s) 1699
TfiI GAWTC 6 cut(s) 484, 684, 763, 783, 1212, 1548
Tru1I TTAA 3 cut(s) 131, 627, 837
Tru9I TTAA 3 cut(s) 131, 627, 837
TscAI CASTG 2 cut(s) 1514, 1625
TseFI GTSAC 1 cut(s) 673
TseI GCWGC 5 cut(s) 277, 722, 1147, 1429, 1432
Tsp45I GTSAC 1 cut(s) 673
TspDTI ATGAA 8 cut(s) 204, 636, 993, 1090, 1095, 1116, 1506, 1661
TspGWI ACGGA 2 cut(s) 410, 1490
TspRI CASTG 2 cut(s) 1514, 1625
VpaK11BI GGWCC 1 cut(s) 1344
XapI RAATTY 6 cut(s) 917, 1123, 1272, 1381, 1494, 1578
XceI RCATGY 2 cut(s) 290, 307
XcmI CCANNNNNNNNNTGG 1 cut(s) 657
XmaJI CCTAGG 1 cut(s) 1162
XmnI GAANNNNTTC 1 cut(s) 1188
XspI CTAG 8 cut(s) 56, 1163, 1250, 1338, 1526, 1731, 1748, 1754
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.