Rw0G013160

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_wichuraiana
Contig00588
OG0000107
Physical Location & Seq
Forward (+)
22130 .. 24406
2277 bp
Loading structure...
UTR
Exon/CDS
Intron
Rw0G013160.1

Sequence Viewer

Length: 1545 bp
ATGCTTCTCAATTTCCTATGGTGGTTGCTCATAGTAATAGAACTGGTACATGGTGGAGAAGGCCTTGAAAATTGCATAGAAACGAGGTGTAAACACCATGGCCCAACTATCCGATTTCCCTTTCGAATTAAAGGTAGGCAGCCAAATCACTGTGGTTATGAAGGCTTTGACATATCATGCACCAATGACAAGCAGACTGTTCTGGAGGTCATGCCATTGTTGGCGAGCAAGTTCTTTGTAAAAAACATCAACTATGCATCTCAGGAAATTGAAATATATTACCAGATTGGTTGCCCTCCTCAACAGGTTTTTGACCTCATCAGTTTATTGCCTTCTTCCCCATTCAAATTTGTAGAGGGCGGACGGAACTATACATTATTCAGCTGTCCATCATCGAAAGAACTAGACGAATATCGACGATCTCAGGGTCCTTATTGTGTGGCGAAACTAGGGCCTTGCAACCATGGCAGCAATCCTATAGGCAACCAGTTTTACACTGTTCCTGCAATGGTCCAAGCCATCATGTCAACATTGCGAAGAGATGAGAAAGACATCTATTTAATTTGTAGAAATAAGCATATATTCAACAAATTTAACCAAACATGTACAAAGGAAAGCTTTCTTCTGAATTATTTGTTGCTGTCCTATGCTGACATTAAGAGGATAACAAATAAATTTGAGGACAAGTTGGGCCAAGGGGCCTATGGAACAGTGTACAAAGGAAAGCTTTCTTCTGAATTATTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAAAAGGGTGGAGATTTTATAAATGAGGTAGGAACAATGGGTCGAATCCACCATGTCAATGTGGTTTGCTTGGTTGGCTTTTGTGCCGATGGATATATACGAGCTCTCATTTATGAATTCTTACCAAATGGTTCATTGCAGAATTTCTTATCACCAGCAGATCGTAAGAACTCTTTCCTTGGTTGGGATAGGTTGCAAGATATTGCTTTAGGTGTAGCCAAGGGAATTGAATATCTTCACCAAGGGTGTGATCAAAGAATCCTCCATTTTGATATCAAACCCCATAATGTTTTGCTAGAGGAGGACTTCACCCCAAAAGTTTCTGATTTTGGTCTAGCCAAGTTATGTTCTAAGGATCAAAGCGCAATATCCATGACTACAGCCAGAGGGACCATGGGCTACATAGCGCCTGAAGTGTTCTCTAGGAACTTTGGTAACGTGTCCTATAAGTCAGATGTCTATAGTTTTGGAACATTGTTGCTGGAAATGGTTGGGGGTAGAAAAAATTTTAAAGTCACTGAGGACTCCACCAGCGAAGTCTACTTCCCAGAGTGGATCTATAACCTCTTAGAAGAAGGGAACGACCTACGAATCCATATTGAGGACGAAGGAGACAGTAAAATTGCTAGGAAGCTTGCAATCGTGGGTCTATGGTGCATCCAATGGCACCCAGTAGATCGTCCGCCCATGAAACTCGTAGTTCAAATGTTGGAAAGAGAAGGTGACAATCTAACCATGCCTCCTAATCCTTTTGCCTCTACTTCAAACTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

514

Amino Acids

58.33

Weight (kDa)

6.51

Isoelectric Point (pI)

43.72

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 25 - 93 8.4e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 225 - 493 1.6e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 227 - 493 1.2e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 794
AccB1I GGYRCC 1 cut(s) 1440
AccI GTMKAC 1 cut(s) 1314
AciI CCGC 2 cut(s) 360, 1457
AclWI GGATC 2 cut(s) 1137, 1337
AcsI RAATTY 6 cut(s) 347, 590, 674, 890, 916, 1279
AcuI CTGAAG 1 cut(s) 1206
AfaI GTAC 3 cut(s) 48, 607, 716
AfiI CCNNNNNNNGG 2 cut(s) 958, 1375
AflIII ACRYGT 2 cut(s) 602, 1212
AgsI TTSAA 8 cut(s) 68, 272, 346, 586, 771, 1004, 1478, 1539
AluBI AGCT 5 cut(s) 384, 618, 727, 878, 1408
AluI AGCT 5 cut(s) 384, 618, 727, 878, 1408
Alw21I GWGCWC 1 cut(s) 880
Alw26I GTCTC 1 cut(s) 1380
AlwI GGATC 2 cut(s) 1137, 1337
AoxI GGCC 5 cut(s) 61, 100, 452, 691, 699
ApeKI GCWGC 2 cut(s) 139, 468
ApoI RAATTY 6 cut(s) 347, 590, 674, 890, 916, 1279
Asp700I GAANNNNTTC 4 cut(s) 618, 727, 947, 1008
AspLEI GCGC 2 cut(s) 1139, 1183
AspS9I GGNCC 7 cut(s) 101, 428, 452, 511, 691, 699, 1164
AsuHPI GGTGA 4 cut(s) 918, 1004, 1075, 1508
AsuII TTCGAA 1 cut(s) 124
AvaII GGWCC 3 cut(s) 428, 511, 1164
BanI GGYRCC 1 cut(s) 1440
BanII GRGCYC 1 cut(s) 880
Bbv12I GWGCWC 1 cut(s) 880
BbvI GCAGC 2 cut(s) 151, 480
BccI CCATC 3 cut(s) 397, 527, 857
BclI TGATCA 1 cut(s) 1024
BcoDI GTCTC 1 cut(s) 1380
BfaI CTAG 6 cut(s) 404, 449, 1070, 1109, 1197, 1401
BfmI CTRYAG 3 cut(s) 477, 1152, 1234
BfoI RGCGCY 1 cut(s) 1184
BisI GCNGC 2 cut(s) 140, 469
BlsI GCNGC 2 cut(s) 141, 470
Bme18I GGWCC 3 cut(s) 428, 511, 1164
BmgT120I GGNCC 7 cut(s) 101, 428, 452, 511, 691, 699, 1164
BmiI GGNNCC 4 cut(s) 429, 700, 1165, 1442
BmrI ACTGGG 1 cut(s) 1439
BmsI GCATC 2 cut(s) 266, 1440
BmuI ACTGGG 1 cut(s) 1439
BpmI CTGGAG 1 cut(s) 224
Bpu14I TTCGAA 1 cut(s) 124
BsaJI CCNNGG 7 cut(s) 97, 463, 694, 952, 993, 1015, 1167
BsaXI ACNNNNNCTCC 2 cut(s) 1498, 1528
Bsc4I CCNNNNNNNGG 2 cut(s) 958, 1375
Bse1I ACTGG 3 cut(s) 48, 487, 1445
Bse3DI GCAATG 3 cut(s) 513, 530, 908
BseDI CCNNGG 7 cut(s) 97, 463, 694, 952, 993, 1015, 1167
BseGI GGATG 1 cut(s) 1431
BseLI CCNNNNNNNGG 2 cut(s) 958, 1375
BseMI GCAATG 3 cut(s) 513, 530, 908
BseMII CTCAG 3 cut(s) 275, 437, 1284
BseNI ACTGG 3 cut(s) 48, 487, 1445
BseRI GAGGAG 2 cut(s) 288, 1088
BseXI GCAGC 2 cut(s) 151, 480
BshFI GGCC 5 cut(s) 63, 102, 454, 693, 701
BshNI GGYRCC 1 cut(s) 1440
BsiHKAI GWGCWC 1 cut(s) 880
BslFI GGGAC 1 cut(s) 1177
BslI CCNNNNNNNGG 2 cut(s) 958, 1375
BsmAI GTCTC 1 cut(s) 1380
BsmFI GGGAC 1 cut(s) 1177
BsnI GGCC 5 cut(s) 63, 102, 454, 693, 701
Bsp119I TTCGAA 1 cut(s) 124
Bsp1286I GDGCHC 1 cut(s) 880
Bsp1407I TGTACA 2 cut(s) 605, 714
Bsp143I GATC 6 cut(s) 419, 934, 1024, 1129, 1329, 1450
Bsp19I CCATGG 3 cut(s) 97, 463, 1167
BspACI CCGC 2 cut(s) 360, 1457
BspANI GGCC 5 cut(s) 63, 102, 454, 693, 701
BspCNI CTCAG 3 cut(s) 274, 436, 1285
BspLI GGNNCC 4 cut(s) 429, 700, 1165, 1442
BspPI GGATC 2 cut(s) 1137, 1337
BspT104I TTCGAA 1 cut(s) 124
BspT107I GGYRCC 1 cut(s) 1440
BsrDI GCAATG 3 cut(s) 513, 530, 908
BsrGI TGTACA 2 cut(s) 605, 714
BsrI ACTGG 3 cut(s) 48, 487, 1445
BssECI CCNNGG 7 cut(s) 97, 463, 694, 952, 993, 1015, 1167
BssMI GATC 6 cut(s) 419, 934, 1024, 1129, 1329, 1450
BssT1I CCWWGG 7 cut(s) 97, 463, 694, 952, 993, 1015, 1167
Bst4CI ACNGT 5 cut(s) 152, 199, 499, 712, 1391
Bst6I CTCTTC 1 cut(s) 532
BstAUI TGTACA 2 cut(s) 605, 714
BstBI TTCGAA 1 cut(s) 124
BstC8I GCNNGC 2 cut(s) 226, 1410
BstDEI CTNAG 5 cut(s) 261, 423, 1125, 1293, 1342
BstDSI CCRYGG 3 cut(s) 97, 463, 1167
BstF5I GGATG 1 cut(s) 1431
BstH2I RGCGCY 1 cut(s) 1184
BstHHI GCGC 2 cut(s) 1139, 1183
BstKTI GATC 6 cut(s) 422, 937, 1027, 1132, 1332, 1453
BstMAI GTCTC 1 cut(s) 1380
BstMBI GATC 6 cut(s) 419, 934, 1024, 1129, 1329, 1450
BstMWI GCNNNNNNNGC 2 cut(s) 465, 849
BstNSI RCATGY 1 cut(s) 606
BstSFI CTRYAG 3 cut(s) 477, 1152, 1234
BstV1I GCAGC 2 cut(s) 151, 480
BstX2I RGATCY 1 cut(s) 1329
BstYI RGATCY 1 cut(s) 1329
BsuRI GGCC 5 cut(s) 63, 102, 454, 693, 701
BtgI CCRYGG 3 cut(s) 97, 463, 1167
BtsCI GGATG 1 cut(s) 1431
BtsIMutI CAGTG 4 cut(s) 148, 495, 717, 1290
Cac8I GCNNGC 2 cut(s) 226, 1410
CfoI GCGC 2 cut(s) 1139, 1183
Cfr13I GGNCC 7 cut(s) 101, 428, 452, 511, 691, 699, 1164
Csp6I GTAC 3 cut(s) 47, 606, 715
CviQI GTAC 3 cut(s) 47, 606, 715
DdeI CTNAG 5 cut(s) 261, 423, 1125, 1293, 1342
DpnI GATC 6 cut(s) 421, 936, 1026, 1131, 1331, 1452
DpnII GATC 6 cut(s) 419, 934, 1024, 1129, 1329, 1450
DraI TTTAAA 1 cut(s) 1285
Eam1104I CTCTTC 1 cut(s) 532
EarI CTCTTC 1 cut(s) 532
EciI GGCGGA 2 cut(s) 375, 1446
Ecl136II GAGCTC 1 cut(s) 878
Eco130I CCWWGG 7 cut(s) 97, 463, 694, 952, 993, 1015, 1167
Eco147I AGGCCT 1 cut(s) 63
Eco24I GRGCYC 1 cut(s) 880
Eco32I GATATC 1 cut(s) 1048
Eco47I GGWCC 3 cut(s) 428, 511, 1164
Eco53kI GAGCTC 1 cut(s) 878
Eco57I CTGAAG 1 cut(s) 1206
EcoICRI GAGCTC 1 cut(s) 878
EcoO109I RGGNCCY 3 cut(s) 428, 452, 699
EcoRI GAATTC 1 cut(s) 890
EcoRV GATATC 1 cut(s) 1048
EcoT14I CCWWGG 7 cut(s) 97, 463, 694, 952, 993, 1015, 1167
EcoT22I ATGCAT 1 cut(s) 259
EcoT38I GRGCYC 1 cut(s) 880
ErhI CCWWGG 7 cut(s) 97, 463, 694, 952, 993, 1015, 1167
FalI AAGNNNNNCTT 4 cut(s) 602, 634, 711, 743
FaqI GGGAC 1 cut(s) 1177
FbaI TGATCA 1 cut(s) 1024
FblI GTMKAC 1 cut(s) 1314
Fnu4HI GCNGC 2 cut(s) 140, 469
FokI GGATG 1 cut(s) 1418
FriOI GRGCYC 1 cut(s) 880
Fsp4HI GCNGC 2 cut(s) 140, 469
FspBI CTAG 6 cut(s) 404, 449, 1070, 1109, 1197, 1401
GlaI GCGC 2 cut(s) 1138, 1182
GluI GCNGC 2 cut(s) 140, 469
GsuI CTGGAG 1 cut(s) 224
HaeII RGCGCY 1 cut(s) 1184
HaeIII GGCC 5 cut(s) 63, 102, 454, 693, 701
HhaI GCGC 2 cut(s) 1139, 1183
Hin6I GCGC 2 cut(s) 1137, 1181
HinP1I GCGC 2 cut(s) 1137, 1181
HincII GTYRAC 1 cut(s) 528
HindII GTYRAC 1 cut(s) 528
HindIII AAGCTT 3 cut(s) 616, 725, 1406
HinfI GANTC 4 cut(s) 819, 1032, 1298, 1365
HphI GGTGA 4 cut(s) 918, 1004, 1075, 1508
Hpy166II GTNNAC 4 cut(s) 92, 528, 715, 1315
Hpy188I TCNGA 5 cut(s) 113, 627, 736, 1099, 1228
Hpy188III TCNNGA 2 cut(s) 203, 263
Hpy8I GTNNAC 4 cut(s) 92, 528, 715, 1315
Hpy99I CGWCG 1 cut(s) 420
HpyAV CCTTC 6 cut(s) 53, 155, 342, 1343, 1376, 1487
HpyCH4III ACNGT 5 cut(s) 152, 199, 499, 712, 1391
HpyCH4IV ACGT 1 cut(s) 1212
HpyCH4V TGCA 9 cut(s) 75, 180, 257, 459, 506, 913, 970, 1412, 1431
HpyF10VI GCNNNNNNNGC 2 cut(s) 465, 849
HpyF3I CTNAG 5 cut(s) 261, 423, 1125, 1293, 1342
HpySE526I ACGT 1 cut(s) 1212
HspAI GCGC 2 cut(s) 1137, 1181
Ksp22I TGATCA 1 cut(s) 1024
Kzo9I GATC 6 cut(s) 419, 934, 1024, 1129, 1329, 1450
Lsp1109I GCAGC 2 cut(s) 151, 480
LweI GCATC 2 cut(s) 266, 1440
MaeI CTAG 6 cut(s) 404, 449, 1070, 1109, 1197, 1401
MaeII ACGT 1 cut(s) 1212
MaeIII GTNAC 3 cut(s) 1208, 1288, 1496
MalI GATC 6 cut(s) 421, 936, 1026, 1131, 1331, 1452
MboI GATC 6 cut(s) 419, 934, 1024, 1129, 1329, 1450
MboII GAAGA 6 cut(s) 327, 549, 614, 723, 1001, 1358
MflI RGATCY 1 cut(s) 1329
MhlI GDGCHC 1 cut(s) 880
MlyI GAGTC 1 cut(s) 1292
MmeI TCCRAC 1 cut(s) 1464
Mph1103I ATGCAT 1 cut(s) 259
MroXI GAANNNNTTC 4 cut(s) 618, 727, 947, 1008
MseI TTAA 5 cut(s) 129, 560, 594, 657, 1284
MslI CAYNNNNRTG 1 cut(s) 831
MspA1I CMGCKG 1 cut(s) 384
MwoI GCNNNNNNNGC 2 cut(s) 465, 849
NcoI CCATGG 3 cut(s) 97, 463, 1167
NdeII GATC 6 cut(s) 419, 934, 1024, 1129, 1329, 1450
NlaIV GGNNCC 4 cut(s) 429, 700, 1165, 1442
NmuCI GTSAC 2 cut(s) 1288, 1496
NsiI ATGCAT 1 cut(s) 259
NspI RCATGY 1 cut(s) 606
NspV TTCGAA 1 cut(s) 124
PceI AGGCCT 1 cut(s) 63
PciI ACATGT 1 cut(s) 602
PdmI GAANNNNTTC 4 cut(s) 618, 727, 947, 1008
PfeI GAWTC 3 cut(s) 819, 1032, 1365
PkrI GCNGC 2 cut(s) 141, 470
PleI GAGTC 1 cut(s) 1292
PpsI GAGTC 1 cut(s) 1292
PpuMI RGGWCCY 1 cut(s) 428
PscI ACATGT 1 cut(s) 602
PsiI TTATAA 1 cut(s) 794
Psp124BI GAGCTC 1 cut(s) 880
Psp5II RGGWCCY 1 cut(s) 428
PspN4I GGNNCC 4 cut(s) 429, 700, 1165, 1442
PspPI GGNCC 7 cut(s) 101, 428, 452, 511, 691, 699, 1164
PspPPI RGGWCCY 1 cut(s) 428
PsuI RGATCY 1 cut(s) 1329
PvuII CAGCTG 1 cut(s) 384
RsaI GTAC 3 cut(s) 48, 607, 716
RsaNI GTAC 3 cut(s) 47, 606, 715
RseI CAYNNNNRTG 1 cut(s) 831
SacI GAGCTC 1 cut(s) 880
SaqAI TTAA 5 cut(s) 129, 560, 594, 657, 1284
SatI GCNGC 2 cut(s) 140, 469
Sau3AI GATC 6 cut(s) 419, 934, 1024, 1129, 1329, 1450
Sau96I GGNCC 7 cut(s) 101, 428, 452, 511, 691, 699, 1164
SchI GAGTC 1 cut(s) 1292
SduI GDGCHC 1 cut(s) 880
SfaNI GCATC 2 cut(s) 266, 1440
SfcI CTRYAG 3 cut(s) 477, 1152, 1234
SfuI TTCGAA 1 cut(s) 124
SinI GGWCC 3 cut(s) 428, 511, 1164
SmiMI CAYNNNNRTG 1 cut(s) 831
SseBI AGGCCT 1 cut(s) 63
SsiI CCGC 2 cut(s) 360, 1457
SspMI CTAG 6 cut(s) 404, 449, 1070, 1109, 1197, 1401
SstI GAGCTC 1 cut(s) 880
StuI AGGCCT 1 cut(s) 63
StyI CCWWGG 7 cut(s) 97, 463, 694, 952, 993, 1015, 1167
TaaI ACNGT 5 cut(s) 152, 199, 499, 712, 1391
TaiI ACGT 1 cut(s) 1215
TaqI TCGA 4 cut(s) 124, 395, 415, 817
TatI WGTACW 2 cut(s) 605, 714
TfiI GAWTC 3 cut(s) 819, 1032, 1365
Tru1I TTAA 5 cut(s) 129, 560, 594, 657, 1284
Tru9I TTAA 5 cut(s) 129, 560, 594, 657, 1284
TscAI CASTG 4 cut(s) 155, 502, 717, 1297
TseFI GTSAC 2 cut(s) 1288, 1496
TseI GCWGC 2 cut(s) 139, 468
Tsp45I GTSAC 2 cut(s) 1288, 1496
TspDTI ATGAA 5 cut(s) 174, 789, 897, 903, 1478
TspGWI ACGGA 1 cut(s) 379
TspRI CASTG 4 cut(s) 155, 502, 717, 1297
VpaK11BI GGWCC 3 cut(s) 428, 511, 1164
XapI RAATTY 6 cut(s) 347, 590, 674, 890, 916, 1279
XceI RCATGY 1 cut(s) 606
XcmI CCANNNNNNNNNTGG 2 cut(s) 701, 1165
XmiI GTMKAC 1 cut(s) 1314
XmnI GAANNNNTTC 4 cut(s) 618, 727, 947, 1008
XspI CTAG 6 cut(s) 404, 449, 1070, 1109, 1197, 1401
Zsp2I ATGCAT 1 cut(s) 259
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.