Prupe.2G312100_v2.0.a1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
prunus_persica
Pp02
OG0000107
Physical Location & Seq
Reverse (-)
29478257 .. 29480459
2203 bp
Loading structure...
UTR
Exon/CDS
Intron
Prupe.2G312100.1

Sequence Viewer

Length: 1653 bp
ATGATGATCATGCCGTCATCGTCCTCAGCTAATCATGATAAGCAGCATGTCTTGGTTAAAAAGATTAACTACACAACTCAGGAAATTGAAATACATTACCAAATTGGTTGCCCGCCGGGGCAGATTTTTTACCTCAATTTATCTTCTTCTCCCTTTGAATTTGAAGACTTTAATTATACCTTATTCAGTTGTCCATCATCTGTACCATATATATCGTCCGGAACTTCTTATGATTGTCTGACGAAACTGAGCCCTTGCCTTGGAAATATTAATAACCAGACTAATTATTATGCGATGCTTGGTGGATATTGTTCCATTAGTAGAATGCCCCTGGAGTCTTGTACCAAGGTGCTTGACTACACATCAGTTCCAGATCTGTTTACCATCAAACAGGCCAATATTCTGAAGCTGCTCTGGTTCATACCTGATTGTCGACGTTGCGAAGATTTGGGCAAGGCATGTAGATTCAAGGATGAATTTTATTCCACACAAAAAAATCACACTGAAACTCAATGTTACGTGCTCAAAGGTCCTAAACGTCCAAGGGCAACGTTAAGGATATTAGGTATTTGTGCACTTTCAGTGGTTGCTATAGTAACAGGGATTGTAATCTGTTATGTCTATAGCTCTACCAAAACAGAGAAGGAAAGCCAGCTGAGAATCGAAAGATTTCTGGATGATTACAGAGCTCTCAAGCCAAGCAGATACTCTTATGCTGATATTAAGAGGATGACAAACAAATTTAAGGACAAGTTGGGCCAAGGGGACTATGGAACAGTGTTCAAAGGAAAGCTTTCCTCTGAATTACTTGTTGCTGTGAAAATCCTGAGCAACTCAAATGAAAAAGCAGGGGAGGATTTCATCAATGAAGTTGGAACAATGGGTCGAATCCACCATGTCAATGTGGTCCGCTTGGTTGGCTTCTGCGCCGACGGATTTATACGAGCTCTTGTCTATGATTTCTTACCAAATGGTTCACTGCAAAATTTCATATCATCATCAGCAGCAGCAGCAGATCATATGAGCAGAAATGATAACTCTAATTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTTTAGGTATAGCCAAAGGAATTGAATATCTTCACCAAGGGTGTGACCAGCAAATTCTCCAGTTTGACATCAAGCCCCACAATGTCTTGCTGGATCAGAATTTTACCCCAAAAGTTTGTGATTTTGGTCTAGCCAAGTTGTGCTCTAAGGATCAAAGTGCAATATCCATGACCACAGCAAGGGGGACCATGGGCTACATTGCGCCCGAAGTCTTCTCTGGAAACTTTGGAAATGTGTCCCATAAGTCGGATGTCTATAGTTTTGGAACGCTGTTGCTTGAAATAGTTGGGGGAAGAAAGAATTTTAAAGTTGCAGAGGACAACGAATCGAGTACGAGCCAAGTCTACTTCCCAAAATGGATCTATAAACTTTTAGAACAAGATCAGGAGGACCTACGGATCCATATTGAGGACGAAGGAGATGTTAAAATTGCAAGGAAGCTTGCAATTGTGGGTCTTTGGTGCATCCAATGGTACCCACTAGACCGTCCTTCCATGAAAATTGTTGTTCAAATGTTGGAAAGACAAGATGACAAGTTAATCATGCCTCCCAATCCTTTTGCCTCTACTTCGAATTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

551

Amino Acids

62.06

Weight (kDa)

7.46

Isoelectric Point (pI)

43.53

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
Acc65I GGTACC 1 cut(s) 1548
AccB1I GGYRCC 1 cut(s) 1548
AccI GTMKAC 2 cut(s) 433, 1419
AccIII TCCGGA 1 cut(s) 218
AciI CCGC 2 cut(s) 113, 910
AclI AACGTT 1 cut(s) 551
AclWI GGATC 5 cut(s) 1176, 1233, 1442, 1468, 1481
AcsI RAATTY 7 cut(s) 158, 476, 740, 985, 1128, 1174, 1375
AcuI CTGAAG 1 cut(s) 425
AfaI GTAC 4 cut(s) 204, 343, 1408, 1550
AfiI CCNNNNNNNGG 5 cut(s) 260, 1054, 1254, 1321, 1483
AgsI TTSAA 8 cut(s) 89, 158, 164, 469, 784, 1100, 1355, 1586
AjnI CCWGG 1 cut(s) 330
AluBI AGCT 8 cut(s) 29, 409, 627, 655, 689, 793, 947, 1516
AluI AGCT 8 cut(s) 29, 409, 627, 655, 689, 793, 947, 1516
Alw21I GWGCWC 5 cut(s) 525, 577, 691, 949, 1220
Alw44I GTGCAC 1 cut(s) 573
AlwI GGATC 5 cut(s) 1176, 1233, 1442, 1468, 1481
Aor13HI TCCGGA 1 cut(s) 218
AoxI GGCC 2 cut(s) 393, 757
ApaLI GTGCAC 1 cut(s) 573
ApeKI GCWGC 5 cut(s) 43, 409, 1004, 1007, 1010
ApoI RAATTY 7 cut(s) 158, 476, 740, 985, 1128, 1174, 1375
AseI ATTAAT 1 cut(s) 270
Asp700I GAANNNNTTC 3 cut(s) 669, 793, 1104
Asp718I GGTACC 1 cut(s) 1548
AspLEI GCGC 2 cut(s) 929, 1279
AspS9I GGNCC 5 cut(s) 530, 757, 907, 1260, 1465
AsuC2I CCSGG 1 cut(s) 117
AsuHPI GGTGA 1 cut(s) 1100
AsuII TTCGAA 1 cut(s) 1646
AvaII GGWCC 4 cut(s) 530, 907, 1260, 1465
BaeGI GKGCMC 1 cut(s) 577
BamHI GGATCC 1 cut(s) 1473
BanI GGYRCC 1 cut(s) 1548
BanII GRGCYC 3 cut(s) 254, 691, 949
BbsI GAAGAC 2 cut(s) 171, 1279
Bbv12I GWGCWC 5 cut(s) 525, 577, 691, 949, 1220
BbvCI CCTCAGC 1 cut(s) 25
BbvI GCAGC 5 cut(s) 55, 396, 1016, 1019, 1022
BccI CCATC 2 cut(s) 202, 392
BciT130I CCWGG 1 cut(s) 332
BclI TGATCA 1 cut(s) 6
BcnI CCSGG 1 cut(s) 117
BfaI CTAG 2 cut(s) 1205, 1556
BfmI CTRYAG 3 cut(s) 591, 622, 1330
BglII AGATCT 1 cut(s) 373
BisI GCNGC 5 cut(s) 44, 410, 1005, 1008, 1011
BlsI GCNGC 5 cut(s) 45, 411, 1006, 1009, 1012
Bme1390I CCNGG 2 cut(s) 117, 332
Bme18I GGWCC 4 cut(s) 530, 907, 1260, 1465
BmgT120I GGNCC 5 cut(s) 530, 757, 907, 1260, 1465
BmiI GGNNCC 3 cut(s) 1261, 1475, 1550
BmrFI CCNGG 2 cut(s) 117, 332
BmsI GCATC 2 cut(s) 285, 1548
BpiI GAAGAC 2 cut(s) 171, 1279
BpmI CTGGAG 2 cut(s) 353, 1118
Bpu10I CCTNAGC 2 cut(s) 25, 827
Bpu14I TTCGAA 1 cut(s) 1646
BpuEI CTTGAG 1 cut(s) 677
BpuMI CCSGG 1 cut(s) 117
BsaAI YACGTR 1 cut(s) 520
BsaBI GATNNNNATC 1 cut(s) 608
BsaJI CCNNGG 9 cut(s) 116, 259, 330, 345, 542, 760, 1048, 1111, 1263
BsaWI WCCGGW 1 cut(s) 218
Bsc4I CCNNNNNNNGG 5 cut(s) 260, 1054, 1254, 1321, 1483
Bse1I ACTGG 1 cut(s) 1135
Bse3DI GCAATG 1 cut(s) 1272
Bse8I GATNNNNATC 1 cut(s) 608
BseAI TCCGGA 1 cut(s) 218
BseBI CCWGG 1 cut(s) 332
BseDI CCNNGG 9 cut(s) 116, 259, 330, 345, 542, 760, 1048, 1111, 1263
BseGI GGATG 5 cut(s) 478, 682, 735, 1330, 1539
BseJI GATNNNNATC 1 cut(s) 608
BseLI CCNNNNNNNGG 5 cut(s) 260, 1054, 1254, 1321, 1483
BseMI GCAATG 1 cut(s) 1272
BseMII CTCAG 5 cut(s) 39, 92, 239, 647, 818
BseNI ACTGG 1 cut(s) 1135
BseSI GKGCMC 1 cut(s) 577
BseXI GCAGC 5 cut(s) 55, 396, 1016, 1019, 1022
BshFI GGCC 2 cut(s) 395, 759
BshNI GGYRCC 1 cut(s) 1548
BsiHKAI GWGCWC 5 cut(s) 525, 577, 691, 949, 1220
BsiSI CCGG 2 cut(s) 116, 219
BslFI GGGAC 3 cut(s) 779, 1273, 1297
BslI CCNNNNNNNGG 5 cut(s) 260, 1054, 1254, 1321, 1483
BsmFI GGGAC 3 cut(s) 779, 1273, 1297
BsmI GAATGC 1 cut(s) 330
BsnI GGCC 2 cut(s) 395, 759
Bsp119I TTCGAA 1 cut(s) 1646
Bsp1286I GDGCHC 6 cut(s) 254, 525, 577, 691, 949, 1220
Bsp13I TCCGGA 1 cut(s) 218
Bsp143I GATC 8 cut(s) 6, 373, 1015, 1168, 1225, 1434, 1456, 1473
Bsp19I CCATGG 1 cut(s) 1263
BspACI CCGC 2 cut(s) 113, 910
BspANI GGCC 2 cut(s) 395, 759
BspCNI CTCAG 5 cut(s) 38, 91, 240, 648, 819
BspEI TCCGGA 1 cut(s) 218
BspHI TCATGA 1 cut(s) 34
BspLI GGNNCC 3 cut(s) 1261, 1475, 1550
BspPI GGATC 5 cut(s) 1176, 1233, 1442, 1468, 1481
BspT104I TTCGAA 1 cut(s) 1646
BspT107I GGYRCC 1 cut(s) 1548
BsrDI GCAATG 1 cut(s) 1272
BsrI ACTGG 1 cut(s) 1135
BssECI CCNNGG 9 cut(s) 116, 259, 330, 345, 542, 760, 1048, 1111, 1263
BssMI GATC 8 cut(s) 6, 373, 1015, 1168, 1225, 1434, 1456, 1473
BssT1I CCWWGG 7 cut(s) 259, 345, 542, 760, 1048, 1111, 1263
Bst2UI CCWGG 1 cut(s) 332
Bst4CI ACNGT 2 cut(s) 778, 1562
BstBAI YACGTR 1 cut(s) 520
BstBI TTCGAA 1 cut(s) 1646
BstC8I GCNNGC 3 cut(s) 113, 653, 1518
BstDEI CTNAG 6 cut(s) 25, 78, 248, 656, 827, 1221
BstDSI CCRYGG 1 cut(s) 1263
BstF5I GGATG 5 cut(s) 478, 682, 735, 1330, 1539
BstHHI GCGC 2 cut(s) 929, 1279
BstKTI GATC 8 cut(s) 9, 376, 1018, 1171, 1228, 1437, 1459, 1476
BstMBI GATC 8 cut(s) 6, 373, 1015, 1168, 1225, 1434, 1456, 1473
BstMWI GCNNNNNNNGC 2 cut(s) 918, 1010
BstNI CCWGG 1 cut(s) 332
BstNSI RCATGY 2 cut(s) 50, 462
BstSCI CCNGG 2 cut(s) 115, 330
BstSFI CTRYAG 3 cut(s) 591, 622, 1330
BstSLI GKGCMC 1 cut(s) 577
BstV1I GCAGC 5 cut(s) 55, 396, 1016, 1019, 1022
BstV2I GAAGAC 2 cut(s) 171, 1279
BstX2I RGATCY 3 cut(s) 373, 1434, 1473
BstYI RGATCY 3 cut(s) 373, 1434, 1473
BsuRI GGCC 2 cut(s) 395, 759
BtgI CCRYGG 1 cut(s) 1263
BtgZI GCGATG 1 cut(s) 308
BtsCI GGATG 5 cut(s) 478, 682, 735, 1330, 1539
BtsI GCAGTG 1 cut(s) 977
BtsIMutI CAGTG 4 cut(s) 501, 588, 783, 977
Cac8I GCNNGC 3 cut(s) 113, 653, 1518
CciI TCATGA 1 cut(s) 34
CfoI GCGC 2 cut(s) 929, 1279
Cfr13I GGNCC 5 cut(s) 530, 757, 907, 1260, 1465
Csp6I GTAC 4 cut(s) 203, 342, 1407, 1549
CviAII CATG 9 cut(s) 10, 35, 47, 459, 896, 1243, 1264, 1570, 1618
CviQI GTAC 4 cut(s) 203, 342, 1407, 1549
DdeI CTNAG 6 cut(s) 25, 78, 248, 656, 827, 1221
DpnI GATC 8 cut(s) 8, 375, 1017, 1170, 1227, 1436, 1458, 1475
DpnII GATC 8 cut(s) 6, 373, 1015, 1168, 1225, 1434, 1456, 1473
DraI TTTAAA 1 cut(s) 1381
Ecl136II GAGCTC 2 cut(s) 689, 947
Eco130I CCWWGG 7 cut(s) 259, 345, 542, 760, 1048, 1111, 1263
Eco24I GRGCYC 3 cut(s) 254, 691, 949
Eco47I GGWCC 4 cut(s) 530, 907, 1260, 1465
Eco53kI GAGCTC 2 cut(s) 689, 947
Eco57I CTGAAG 1 cut(s) 425
EcoICRI GAGCTC 2 cut(s) 689, 947
EcoO109I RGGNCCY 2 cut(s) 530, 1465
EcoRII CCWGG 1 cut(s) 330
EcoT14I CCWWGG 7 cut(s) 259, 345, 542, 760, 1048, 1111, 1263
EcoT38I GRGCYC 3 cut(s) 254, 691, 949
ErhI CCWWGG 7 cut(s) 259, 345, 542, 760, 1048, 1111, 1263
FaeI CATG 9 cut(s) 13, 38, 50, 462, 899, 1246, 1267, 1573, 1621
FalI AAGNNNNNCTT 2 cut(s) 777, 809
FaqI GGGAC 3 cut(s) 779, 1273, 1297
FatI CATG 9 cut(s) 9, 34, 46, 458, 895, 1242, 1263, 1569, 1617
FauI CCCGC 1 cut(s) 120
FauNDI CATATG 1 cut(s) 1020
FbaI TGATCA 1 cut(s) 6
FblI GTMKAC 2 cut(s) 433, 1419
Fnu4HI GCNGC 5 cut(s) 44, 410, 1005, 1008, 1011
FokI GGATG 5 cut(s) 485, 689, 742, 1337, 1526
FriOI GRGCYC 3 cut(s) 254, 691, 949
Fsp4HI GCNGC 5 cut(s) 44, 410, 1005, 1008, 1011
FspBI CTAG 2 cut(s) 1205, 1556
GlaI GCGC 2 cut(s) 928, 1278
GluI GCNGC 5 cut(s) 44, 410, 1005, 1008, 1011
GsuI CTGGAG 2 cut(s) 353, 1118
HaeIII GGCC 2 cut(s) 395, 759
HapII CCGG 2 cut(s) 116, 219
HhaI GCGC 2 cut(s) 929, 1279
Hin1II CATG 9 cut(s) 13, 38, 50, 462, 899, 1246, 1267, 1573, 1621
Hin6I GCGC 2 cut(s) 927, 1277
HinP1I GCGC 2 cut(s) 927, 1277
HincII GTYRAC 1 cut(s) 434
HindII GTYRAC 1 cut(s) 434
HindIII AAGCTT 2 cut(s) 791, 1514
HinfI GANTC 5 cut(s) 335, 465, 660, 888, 1400
HpaII CCGG 2 cut(s) 116, 219
HphI GGTGA 1 cut(s) 1100
Hpy166II GTNNAC 5 cut(s) 381, 434, 575, 977, 1420
Hpy188I TCNGA 5 cut(s) 240, 405, 802, 1173, 1324
Hpy188III TCNNGA 8 cut(s) 35, 80, 219, 371, 674, 826, 1293, 1460
Hpy8I GTNNAC 5 cut(s) 381, 434, 575, 977, 1420
Hpy99I CGWCG 2 cut(s) 438, 935
HpyAV CCTTC 3 cut(s) 637, 1484, 1575
HpyCH4III ACNGT 2 cut(s) 778, 1562
HpyCH4IV ACGT 4 cut(s) 436, 519, 538, 551
HpyCH4V TGCA 8 cut(s) 575, 982, 1066, 1235, 1388, 1508, 1520, 1539
HpyF10VI GCNNNNNNNGC 2 cut(s) 918, 1010
HpyF3I CTNAG 6 cut(s) 25, 78, 248, 656, 827, 1221
HpySE526I ACGT 4 cut(s) 436, 519, 538, 551
Hsp92II CATG 9 cut(s) 13, 38, 50, 462, 899, 1246, 1267, 1573, 1621
HspAI GCGC 2 cut(s) 927, 1277
Kpn2I TCCGGA 1 cut(s) 218
KpnI GGTACC 1 cut(s) 1552
Ksp22I TGATCA 1 cut(s) 6
Kzo9I GATC 8 cut(s) 6, 373, 1015, 1168, 1225, 1434, 1456, 1473
Lsp1109I GCAGC 5 cut(s) 55, 396, 1016, 1019, 1022
LweI GCATC 2 cut(s) 285, 1548
MaeI CTAG 2 cut(s) 1205, 1556
MaeII ACGT 4 cut(s) 436, 519, 538, 551
MaeIII GTNAC 3 cut(s) 515, 595, 1118
MalI GATC 8 cut(s) 8, 375, 1017, 1170, 1227, 1436, 1458, 1475
MboI GATC 8 cut(s) 6, 373, 1015, 1168, 1225, 1434, 1456, 1473
MboII GAAGA 7 cut(s) 135, 138, 176, 455, 1097, 1279, 1380
MfeI CAATTG 1 cut(s) 1521
MflI RGATCY 3 cut(s) 373, 1434, 1473
MhlI GDGCHC 6 cut(s) 254, 525, 577, 691, 949, 1220
MlyI GAGTC 1 cut(s) 344
MmeI TCCRAC 3 cut(s) 853, 1302, 1572
MroI TCCGGA 1 cut(s) 218
MroXI GAANNNNTTC 3 cut(s) 669, 793, 1104
MslI CAYNNNNRTG 1 cut(s) 900
MspA1I CMGCKG 1 cut(s) 655
MspI CCGG 2 cut(s) 116, 219
MspR9I CCNGG 2 cut(s) 117, 332
MunI CAATTG 1 cut(s) 1521
Mva1269I GAATGC 1 cut(s) 330
MvaI CCWGG 1 cut(s) 332
MwoI GCNNNNNNNGC 2 cut(s) 918, 1010
NciI CCSGG 1 cut(s) 117
NcoI CCATGG 1 cut(s) 1263
NdeI CATATG 1 cut(s) 1020
NdeII GATC 8 cut(s) 6, 373, 1015, 1168, 1225, 1434, 1456, 1473
NlaIII CATG 9 cut(s) 13, 38, 50, 462, 899, 1246, 1267, 1573, 1621
NlaIV GGNNCC 3 cut(s) 1261, 1475, 1550
NmuCI GTSAC 1 cut(s) 1118
NspI RCATGY 2 cut(s) 50, 462
NspV TTCGAA 1 cut(s) 1646
PagI TCATGA 1 cut(s) 34
PctI GAATGC 1 cut(s) 330
PdmI GAANNNNTTC 3 cut(s) 669, 793, 1104
PfeI GAWTC 4 cut(s) 465, 660, 888, 1400
PkrI GCNGC 5 cut(s) 45, 411, 1006, 1009, 1012
PleI GAGTC 1 cut(s) 343
PpsI GAGTC 1 cut(s) 343
Ppu21I YACGTR 1 cut(s) 520
PpuMI RGGWCCY 2 cut(s) 530, 1465
PshBI ATTAAT 1 cut(s) 270
Psp124BI GAGCTC 2 cut(s) 691, 949
Psp1406I AACGTT 1 cut(s) 551
Psp5II RGGWCCY 2 cut(s) 530, 1465
Psp6I CCWGG 1 cut(s) 330
PspGI CCWGG 1 cut(s) 330
PspN4I GGNNCC 3 cut(s) 1261, 1475, 1550
PspPI GGNCC 5 cut(s) 530, 757, 907, 1260, 1465
PspPPI RGGWCCY 2 cut(s) 530, 1465
PsuI RGATCY 3 cut(s) 373, 1434, 1473
PvuII CAGCTG 1 cut(s) 655
RsaI GTAC 4 cut(s) 204, 343, 1408, 1550
RsaNI GTAC 4 cut(s) 203, 342, 1407, 1549
RseI CAYNNNNRTG 1 cut(s) 900
SacI GAGCTC 2 cut(s) 691, 949
SalI GTCGAC 1 cut(s) 432
SatI GCNGC 5 cut(s) 44, 410, 1005, 1008, 1011
Sau3AI GATC 8 cut(s) 6, 373, 1015, 1168, 1225, 1434, 1456, 1473
Sau96I GGNCC 5 cut(s) 530, 757, 907, 1260, 1465
SchI GAGTC 1 cut(s) 344
ScrFI CCNGG 2 cut(s) 117, 332
SduI GDGCHC 6 cut(s) 254, 525, 577, 691, 949, 1220
SfaNI GCATC 2 cut(s) 285, 1548
SfcI CTRYAG 3 cut(s) 591, 622, 1330
SfuI TTCGAA 1 cut(s) 1646
SinI GGWCC 4 cut(s) 530, 907, 1260, 1465
SmiMI CAYNNNNRTG 1 cut(s) 900
SmlI CTYRAG 1 cut(s) 692
SmoI CTYRAG 1 cut(s) 692
SsiI CCGC 2 cut(s) 113, 910
SspI AATATT 2 cut(s) 268, 400
SspMI CTAG 2 cut(s) 1205, 1556
SstI GAGCTC 2 cut(s) 691, 949
StyD4I CCNGG 2 cut(s) 115, 330
StyI CCWWGG 7 cut(s) 259, 345, 542, 760, 1048, 1111, 1263
TaaI ACNGT 2 cut(s) 778, 1562
TaiI ACGT 4 cut(s) 439, 522, 541, 554
TaqI TCGA 5 cut(s) 433, 663, 886, 1403, 1646
TfiI GAWTC 4 cut(s) 465, 660, 888, 1400
TscAI CASTG 4 cut(s) 508, 588, 783, 984
TseFI GTSAC 1 cut(s) 1118
TseI GCWGC 5 cut(s) 43, 409, 1004, 1007, 1010
Tsp45I GTSAC 1 cut(s) 1118
TspDTI ATGAA 7 cut(s) 409, 489, 850, 855, 882, 979, 1586
TspGWI ACGGA 2 cut(s) 948, 1486
TspRI CASTG 4 cut(s) 508, 588, 783, 984
VneI GTGCAC 1 cut(s) 573
VpaK11BI GGWCC 4 cut(s) 530, 907, 1260, 1465
VspI ATTAAT 1 cut(s) 270
XapI RAATTY 7 cut(s) 158, 476, 740, 985, 1128, 1174, 1375
XceI RCATGY 2 cut(s) 50, 462
XcmI CCANNNNNNNNNTGG 1 cut(s) 767
XmiI GTMKAC 2 cut(s) 433, 1419
XmnI GAANNNNTTC 3 cut(s) 669, 793, 1104
XspI CTAG 2 cut(s) 1205, 1556
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.