RchiOBHm_Chr5g0047821

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
5
OG0000107
Physical Location & Seq
Reverse (-)
44383959 .. 44385876
1918 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ32568

Sequence Viewer

Length: 1683 bp
ATGCTTCTAACTATGAGTTTCTTCTTCTGGTTGCTCCTGATATTTGTAGATGTCGATGTTGTGCATGGTGGAGGAGTAGGCCTTGAAGATTGCACCGAAACAAGATGTAGCAACGAGGGCCCAGCCATCCGGTTCCCATTTCGACTTAAAGGGAGGCAACCAGTCCATTGTGGCTACCCAGGCTTTGATCTTTCATGCACCAACGACAACAAGACACTTCTTGAGATTCCATCATCATCTAAGCTCTCTGTTACAGGGATTAACTACAAATCACAGCTAATTGAAGCAGATCCTGGACTTGATTGCCTGGCCAGAGACATTTTCTACCACGGTTCTTCTTCTCCCTTCAAACTTGTTGGCAACGCAAGCTTGTTCAGTTGCCCACCATCAGTTGAGAGAGATGAATTTATTACAGATTCCTACCCGTCCTTTGGTTGTCTGGCAAGATTGAGCCCTTGCCATAGTAACCCAGGGATTCCAGGTAACCAGATTTATGCTACCTTCCCAGATCCTAAGAGTGATTGTTCTATTGATAACATACCCCTAGTGTCTTGTACCAAGGTGCATGACTACAAATTTACTCTTGCAAACACATTTGGTATCAGTTATACTGCCATGTATCTCCACTGGTCCATACCATCTTGTCAACATTGTAAAGAGATGGGCAAGTTATGTCGGCTGAAGAATGAATTCACAAATCAGACAGATCTTCAAACTAAATGCTTGGATGTACCCAAAGCCAAAGGTTCTTGCACACTTTCTGTTATTCTTATAGTGACGGGAATGACAATCTACTATGTCTACAGCTCTCTGAAAAGAGAAGAAGAAAATCAGCTGAGAATTAAAAGATTTTTGGATGAATACAGAGCTCTTAAGCCAAGTAGATATTCTTATTCAGATTATAAGAGGATAACAGAGAAGTTCAAGGAGAAGCTGGGTCAAGGGTCCTATGGAACTGTGTTTAAAGGTAGGCTTTCCTCTGAATTACTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAGAAAGGGGAAGATTTTATTAACGAAGTGGGCACAATGGGTCAAATCCACCACGTCAATGTGGTACGCTTGATTGGTTACTGTGCTGATGGATTTATACGAGCTCTTGTTTATGAATTCTTACCAAACGGTCCACTCCAGAATTTCTTATCATCAGCAGATAATGAGAGTTCGTTCCTTGGTTGGGTTAAGTTGCAAGATATTGCTTTAGGTATAGCGAAAGGAATTGAATATCTTCACCAAGGTTGTGAACAACAAATTCTCCACTTTGACATCAAACCCCATAATGTGTTGCTAGACCATGATTTCACTCCAAAAGTTTCCGATTTTGGTTTAGCCAAGTTGTGCTCTAGGGATCGAAGTGCCATATCCATGACTGCAGCGAGGGGAACCATGGGCTATATTGCACCAGAAGTCTTCTCTAGGAACTTTGGTAATGTGTCATATAAGGCAGATGTCTATAGTTTTGGAACATTGCTTCTTGAAATGGTGGGGGGCAGAAAGAATTTTAAAGTCATGGAAGACTCCACCAACCAAGTCTACTTCCCAGAATGGATCTATAACCTCTTAGAACAAGGGAACGACCTTCGCATCCATATTGGGGACGAAGGAGATGTTGAAATTGCTAAGAAACTTGCAGTTGTGGGTCTATGGTGCATCTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

560

Amino Acids

62.76

Weight (kDa)

6.29

Isoelectric Point (pI)

35.4

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 31 - 94 4e-18 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 307 - 516 5e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 308 - 517 2.5e-43 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 903
AccI GTMKAC 2 cut(s) 801, 1560
AclWI GGATC 4 cut(s) 284, 503, 1383, 1583
AcoI YGGCCR 1 cut(s) 309
AcsI RAATTY 7 cut(s) 404, 575, 689, 1136, 1162, 1278, 1525
AcuI CTGAAG 1 cut(s) 701
AfaI GTAC 3 cut(s) 556, 732, 1086
AfiI CCNNNNNNNGG 3 cut(s) 431, 1204, 1621
AflII CTTAAG 1 cut(s) 872
AgsI TTSAA 9 cut(s) 86, 284, 349, 713, 925, 1017, 1250, 1505, 1640
AjiI CACGTC 1 cut(s) 1075
AjnI CCWGG 5 cut(s) 178, 292, 306, 469, 478
AjuI GAANNNNNNNTTGG 2 cut(s) 871, 903
AluBI AGCT 8 cut(s) 244, 277, 369, 807, 835, 869, 934, 1124
AluI AGCT 8 cut(s) 244, 277, 369, 807, 835, 869, 934, 1124
Alw21I GWGCWC 3 cut(s) 871, 1126, 1370
Alw26I GTCTC 1 cut(s) 309
AlwI GGATC 4 cut(s) 284, 503, 1383, 1583
AlwNI CAGNNNCTG 1 cut(s) 293
AoxI GGCC 3 cut(s) 79, 118, 309
ApaI GGGCCC 1 cut(s) 122
ApeKI GCWGC 1 cut(s) 1400
ApoI RAATTY 7 cut(s) 404, 575, 689, 1136, 1162, 1278, 1525
Asp700I GAANNNNTTC 2 cut(s) 689, 1254
AspS9I GGNCC 5 cut(s) 118, 119, 630, 945, 1151
AsuHPI GGTGA 1 cut(s) 1250
AvaII GGWCC 3 cut(s) 630, 945, 1151
BaeGI GKGCMC 2 cut(s) 122, 1055
BalI TGGCCA 1 cut(s) 311
BanII GRGCYC 4 cut(s) 122, 455, 871, 1126
BbsI GAAGAC 2 cut(s) 1429, 1548
Bbv12I GWGCWC 3 cut(s) 871, 1126, 1370
BbvI GCAGC 1 cut(s) 1412
BccI CCATC 6 cut(s) 134, 238, 394, 646, 655, 1103
BciT130I CCWGG 5 cut(s) 180, 294, 308, 471, 480
BcoDI GTCTC 1 cut(s) 309
BfaI CTAG 4 cut(s) 545, 1316, 1371, 1443
BfmI CTRYAG 3 cut(s) 802, 1398, 1480
BfrI CTTAAG 1 cut(s) 872
BglII AGATCT 1 cut(s) 706
BisI GCNGC 1 cut(s) 1401
BlsI GCNGC 1 cut(s) 1402
Bme1390I CCNGG 5 cut(s) 180, 294, 308, 471, 480
Bme18I GGWCC 3 cut(s) 630, 945, 1151
BmgBI CACGTC 1 cut(s) 1075
BmgT120I GGNCC 5 cut(s) 118, 119, 630, 945, 1151
BmiI GGNNCC 4 cut(s) 120, 134, 946, 1411
BmrFI CCNGG 5 cut(s) 180, 294, 308, 471, 480
BmsI GCATC 1 cut(s) 1620
BpiI GAAGAC 2 cut(s) 1429, 1548
BpmI CTGGAG 1 cut(s) 1142
BpuEI CTTGAG 1 cut(s) 242
BsaJI CCNNGG 8 cut(s) 178, 328, 469, 470, 558, 1198, 1261, 1413
BsaWI WCCGGW 1 cut(s) 129
BsaXI ACNNNNNCTCC 2 cut(s) 1266, 1296
Bsc4I CCNNNNNNNGG 3 cut(s) 431, 1204, 1621
Bse1I ACTGG 2 cut(s) 161, 632
Bse3DI GCAATG 1 cut(s) 1493
BseBI CCWGG 5 cut(s) 180, 294, 308, 471, 480
BseDI CCNNGG 8 cut(s) 178, 328, 469, 470, 558, 1198, 1261, 1413
BseGI GGATG 4 cut(s) 126, 733, 862, 1611
BseLI CCNNNNNNNGG 3 cut(s) 431, 1204, 1621
BseMI GCAATG 1 cut(s) 1493
BseMII CTCAG 1 cut(s) 827
BseNI ACTGG 2 cut(s) 161, 632
BseRI GAGGAG 1 cut(s) 87
BseSI GKGCMC 2 cut(s) 122, 1055
BseXI GCAGC 1 cut(s) 1412
BseYI CCCAGC 2 cut(s) 121, 934
BshFI GGCC 3 cut(s) 81, 120, 311
BsiHKAI GWGCWC 3 cut(s) 871, 1126, 1370
BsiSI CCGG 1 cut(s) 130
BslFI GGGAC 1 cut(s) 1637
BslI CCNNNNNNNGG 3 cut(s) 431, 1204, 1621
BsmAI GTCTC 1 cut(s) 309
BsmFI GGGAC 1 cut(s) 1637
BsnI GGCC 3 cut(s) 81, 120, 311
Bsp120I GGGCCC 1 cut(s) 118
Bsp1286I GDGCHC 6 cut(s) 122, 455, 871, 1055, 1126, 1370
Bsp143I GATC 6 cut(s) 187, 289, 508, 706, 1375, 1575
Bsp19I CCATGG 1 cut(s) 1413
BspANI GGCC 3 cut(s) 81, 120, 311
BspCNI CTCAG 1 cut(s) 828
BspLI GGNNCC 4 cut(s) 120, 134, 946, 1411
BspMAI CTGCAG 1 cut(s) 1402
BspPI GGATC 4 cut(s) 284, 503, 1383, 1583
BspTI CTTAAG 1 cut(s) 872
BsrDI GCAATG 1 cut(s) 1493
BsrI ACTGG 2 cut(s) 161, 632
BssECI CCNNGG 8 cut(s) 178, 328, 469, 470, 558, 1198, 1261, 1413
BssMI GATC 6 cut(s) 187, 289, 508, 706, 1375, 1575
BssT1I CCWWGG 4 cut(s) 558, 1198, 1261, 1413
Bst2UI CCWGG 5 cut(s) 180, 294, 308, 471, 480
Bst4CI ACNGT 4 cut(s) 332, 958, 1103, 1151
BstAFI CTTAAG 1 cut(s) 872
BstC8I GCNNGC 1 cut(s) 367
BstDEI CTNAG 5 cut(s) 240, 513, 836, 1588, 1647
BstDSI CCRYGG 2 cut(s) 328, 1413
BstEII GGTNACC 1 cut(s) 482
BstF5I GGATG 4 cut(s) 126, 733, 862, 1611
BstKTI GATC 6 cut(s) 190, 292, 511, 709, 1378, 1578
BstMAI GTCTC 1 cut(s) 309
BstMBI GATC 6 cut(s) 187, 289, 508, 706, 1375, 1575
BstMWI GCNNNNNNNGC 3 cut(s) 117, 180, 366
BstNI CCWGG 5 cut(s) 180, 294, 308, 471, 480
BstPI GGTNACC 1 cut(s) 482
BstSCI CCNGG 5 cut(s) 178, 292, 306, 469, 478
BstSFI CTRYAG 3 cut(s) 802, 1398, 1480
BstSLI GKGCMC 2 cut(s) 122, 1055
BstV1I GCAGC 1 cut(s) 1412
BstV2I GAAGAC 2 cut(s) 1429, 1548
BstX2I RGATCY 4 cut(s) 289, 508, 706, 1575
BstYI RGATCY 4 cut(s) 289, 508, 706, 1575
BsuRI GGCC 3 cut(s) 81, 120, 311
BtgI CCRYGG 2 cut(s) 328, 1413
BtrI CACGTC 1 cut(s) 1075
BtsCI GGATG 4 cut(s) 126, 733, 862, 1611
BtsIMutI CAGTG 1 cut(s) 625
Cac8I GCNNGC 1 cut(s) 367
CaiI CAGNNNCTG 1 cut(s) 293
Cfr13I GGNCC 5 cut(s) 118, 119, 630, 945, 1151
Csp6I GTAC 3 cut(s) 555, 731, 1085
CviAII CATG 8 cut(s) 65, 195, 566, 616, 1322, 1393, 1414, 1537
CviQI GTAC 3 cut(s) 555, 731, 1085
DdeI CTNAG 5 cut(s) 240, 513, 836, 1588, 1647
DpnI GATC 6 cut(s) 189, 291, 510, 708, 1377, 1577
DpnII GATC 6 cut(s) 187, 289, 508, 706, 1375, 1575
DraI TTTAAA 2 cut(s) 964, 1531
EaeI YGGCCR 1 cut(s) 309
Ecl136II GAGCTC 2 cut(s) 869, 1124
Eco130I CCWWGG 4 cut(s) 558, 1198, 1261, 1413
Eco147I AGGCCT 1 cut(s) 81
Eco24I GRGCYC 4 cut(s) 122, 455, 871, 1126
Eco47I GGWCC 3 cut(s) 630, 945, 1151
Eco53kI GAGCTC 2 cut(s) 869, 1124
Eco57I CTGAAG 1 cut(s) 701
Eco91I GGTNACC 1 cut(s) 482
EcoICRI GAGCTC 2 cut(s) 869, 1124
EcoO109I RGGNCCY 2 cut(s) 118, 945
EcoO65I GGTNACC 1 cut(s) 482
EcoRI GAATTC 2 cut(s) 689, 1136
EcoRII CCWGG 5 cut(s) 178, 292, 306, 469, 478
EcoT14I CCWWGG 4 cut(s) 558, 1198, 1261, 1413
EcoT38I GRGCYC 4 cut(s) 122, 455, 871, 1126
ErhI CCWWGG 4 cut(s) 558, 1198, 1261, 1413
FaeI CATG 8 cut(s) 68, 198, 569, 619, 1325, 1396, 1417, 1540
FalI AAGNNNNNCTT 2 cut(s) 957, 989
FaqI GGGAC 1 cut(s) 1637
FatI CATG 8 cut(s) 64, 194, 565, 615, 1321, 1392, 1413, 1536
FblI GTMKAC 2 cut(s) 801, 1560
Fnu4HI GCNGC 1 cut(s) 1401
FokI GGATG 4 cut(s) 113, 740, 869, 1598
FriOI GRGCYC 4 cut(s) 122, 455, 871, 1126
Fsp4HI GCNGC 1 cut(s) 1401
FspBI CTAG 4 cut(s) 545, 1316, 1371, 1443
GluI GCNGC 1 cut(s) 1401
GsaI CCCAGC 2 cut(s) 125, 938
GsuI CTGGAG 1 cut(s) 1142
HaeIII GGCC 3 cut(s) 81, 120, 311
HapII CCGG 1 cut(s) 130
Hin1II CATG 8 cut(s) 68, 198, 569, 619, 1325, 1396, 1417, 1540
HincII GTYRAC 1 cut(s) 647
HindII GTYRAC 1 cut(s) 647
HindIII AAGCTT 1 cut(s) 367
HinfI GANTC 4 cut(s) 226, 416, 475, 1544
HpaII CCGG 1 cut(s) 130
HphI GGTGA 1 cut(s) 1250
Hpy166II GTNNAC 5 cut(s) 647, 802, 1154, 1271, 1561
Hpy188I TCNGA 5 cut(s) 702, 813, 898, 982, 1345
Hpy188III TCNNGA 4 cut(s) 37, 221, 1159, 1502
Hpy8I GTNNAC 5 cut(s) 647, 802, 1154, 1271, 1561
HpyAV CCTTC 4 cut(s) 355, 511, 1616, 1622
HpyCH4III ACNGT 4 cut(s) 332, 958, 1103, 1151
HpyCH4IV ACGT 1 cut(s) 1074
HpyF10VI GCNNNNNNNGC 3 cut(s) 117, 180, 366
HpyF3I CTNAG 5 cut(s) 240, 513, 836, 1588, 1647
HpySE526I ACGT 1 cut(s) 1074
Hsp92II CATG 8 cut(s) 68, 198, 569, 619, 1325, 1396, 1417, 1540
Kzo9I GATC 6 cut(s) 187, 289, 508, 706, 1375, 1575
LmnI GCTCC 1 cut(s) 39
Lsp1109I GCAGC 1 cut(s) 1412
LweI GCATC 1 cut(s) 1620
MaeI CTAG 4 cut(s) 545, 1316, 1371, 1443
MaeII ACGT 1 cut(s) 1074
MaeIII GTNAC 5 cut(s) 250, 464, 482, 775, 1097
MalI GATC 6 cut(s) 189, 291, 510, 708, 1377, 1577
MboI GATC 6 cut(s) 187, 289, 508, 706, 1375, 1575
MflI RGATCY 4 cut(s) 289, 508, 706, 1575
MhlI GDGCHC 6 cut(s) 122, 455, 871, 1055, 1126, 1370
MlsI TGGCCA 1 cut(s) 311
MluNI TGGCCA 1 cut(s) 311
MlyI GAGTC 1 cut(s) 1538
MnlI CCTC 8 cut(s) 65, 109, 147, 900, 988, 1016, 1398, 1595
Mox20I TGGCCA 1 cut(s) 311
MroXI GAANNNNTTC 2 cut(s) 689, 1254
MscI TGGCCA 1 cut(s) 311
MseI TTAA 8 cut(s) 147, 261, 843, 873, 963, 1041, 1209, 1530
MslI CAYNNNNRTG 2 cut(s) 1077, 1391
Msp20I TGGCCA 1 cut(s) 311
MspA1I CMGCKG 1 cut(s) 835
MspCI CTTAAG 1 cut(s) 872
MspI CCGG 1 cut(s) 130
MspR9I CCNGG 5 cut(s) 180, 294, 308, 471, 480
MvaI CCWGG 5 cut(s) 180, 294, 308, 471, 480
MwoI GCNNNNNNNGC 3 cut(s) 117, 180, 366
NcoI CCATGG 1 cut(s) 1413
NdeII GATC 6 cut(s) 187, 289, 508, 706, 1375, 1575
NlaIII CATG 8 cut(s) 68, 198, 569, 619, 1325, 1396, 1417, 1540
NlaIV GGNNCC 4 cut(s) 120, 134, 946, 1411
NmuCI GTSAC 1 cut(s) 775
PasI CCCWGGG 1 cut(s) 470
PceI AGGCCT 1 cut(s) 81
PdmI GAANNNNTTC 2 cut(s) 689, 1254
PfeI GAWTC 3 cut(s) 226, 416, 475
PfoI TCCNGGA 1 cut(s) 292
PkrI GCNGC 1 cut(s) 1402
PleI GAGTC 1 cut(s) 1538
PpsI GAGTC 1 cut(s) 1538
PpuMI RGGWCCY 1 cut(s) 945
PsiI TTATAA 1 cut(s) 903
Psp124BI GAGCTC 2 cut(s) 871, 1126
Psp5II RGGWCCY 1 cut(s) 945
Psp6I CCWGG 5 cut(s) 178, 292, 306, 469, 478
PspEI GGTNACC 1 cut(s) 482
PspFI CCCAGC 2 cut(s) 121, 934
PspGI CCWGG 5 cut(s) 178, 292, 306, 469, 478
PspN4I GGNNCC 4 cut(s) 120, 134, 946, 1411
PspOMI GGGCCC 1 cut(s) 118
PspPI GGNCC 5 cut(s) 118, 119, 630, 945, 1151
PspPPI RGGWCCY 1 cut(s) 945
PstI CTGCAG 1 cut(s) 1402
PstNI CAGNNNCTG 1 cut(s) 293
PsuI RGATCY 4 cut(s) 289, 508, 706, 1575
PvuII CAGCTG 1 cut(s) 835
RsaI GTAC 3 cut(s) 556, 732, 1086
RsaNI GTAC 3 cut(s) 555, 731, 1085
RseI CAYNNNNRTG 2 cut(s) 1077, 1391
SacI GAGCTC 2 cut(s) 871, 1126
SaqAI TTAA 8 cut(s) 147, 261, 843, 873, 963, 1041, 1209, 1530
SatI GCNGC 1 cut(s) 1401
Sau3AI GATC 6 cut(s) 187, 289, 508, 706, 1375, 1575
Sau96I GGNCC 5 cut(s) 118, 119, 630, 945, 1151
SchI GAGTC 1 cut(s) 1538
ScrFI CCNGG 5 cut(s) 180, 294, 308, 471, 480
SduI GDGCHC 6 cut(s) 122, 455, 871, 1055, 1126, 1370
SfaNI GCATC 1 cut(s) 1620
SfcI CTRYAG 3 cut(s) 802, 1398, 1480
SinI GGWCC 3 cut(s) 630, 945, 1151
SmiMI CAYNNNNRTG 2 cut(s) 1077, 1391
SmlI CTYRAG 2 cut(s) 221, 872
SmoI CTYRAG 2 cut(s) 221, 872
SseBI AGGCCT 1 cut(s) 81
SspMI CTAG 4 cut(s) 545, 1316, 1371, 1443
SstI GAGCTC 2 cut(s) 871, 1126
StuI AGGCCT 1 cut(s) 81
StyD4I CCNGG 5 cut(s) 178, 292, 306, 469, 478
StyI CCWWGG 4 cut(s) 558, 1198, 1261, 1413
TaaI ACNGT 4 cut(s) 332, 958, 1103, 1151
TaiI ACGT 1 cut(s) 1077
TaqI TCGA 3 cut(s) 54, 142, 1378
TfiI GAWTC 3 cut(s) 226, 416, 475
Tru1I TTAA 8 cut(s) 147, 261, 843, 873, 963, 1041, 1209, 1530
Tru9I TTAA 8 cut(s) 147, 261, 843, 873, 963, 1041, 1209, 1530
TscAI CASTG 1 cut(s) 632
TseFI GTSAC 1 cut(s) 775
TseI GCWGC 1 cut(s) 1400
Tsp45I GTSAC 1 cut(s) 775
TspDTI ATGAA 5 cut(s) 183, 417, 702, 873, 1149
TspRI CASTG 1 cut(s) 632
Vha464I CTTAAG 1 cut(s) 872
VpaK11BI GGWCC 3 cut(s) 630, 945, 1151
XapI RAATTY 7 cut(s) 404, 575, 689, 1136, 1162, 1278, 1525
XmiI GTMKAC 2 cut(s) 801, 1560
XmnI GAANNNNTTC 2 cut(s) 689, 1254
XspI CTAG 4 cut(s) 545, 1316, 1371, 1443
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.