MD01G1059600.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr01
OG0000107
Physical Location & Seq
Reverse (-)
16349629 .. 16351638
2010 bp
Loading structure...
UTR
Exon/CDS
Intron
MD01G1059600.v1.1.491

Sequence Viewer

Length: 1818 bp
ATGCAGAAATTGTTCATCTCTTCCTTTTGCATGTTGTTCCTGGTTTTCTTCAAACTAGTTGGAGCAAGCCAATTTACGTGCTCGAAATCCAAATGTAGCAATGATCAAGGCCCGGCTATCCATTTTCCATTGCGCCGCACGCATCATTGTGATCCTGGGATTGAATGCAATCAGACATTTGAGCAGCCGATACTACTAGCAAAATTCTTTGTCAAGCGCATAGATTACAAGCGTCAGGAAATCCAAGTGCATGCCCCATATAACTCTAATTGCTTGCTGCTAATAAAGCCTGTTAAAATCCCAAACATGTCACTCTCTCCCTTCCACTCGTCAGTTTTCGACGTCTATAACGTTACCTTATTCAGCTGCCCACCTGTTGGAACGTATTATGGGAGTCAAGTCCCCTGCCTCGGTGACCCTGGTAGCACAACTTATGGTTTTTATGGTCATTATAGTGATTATAGGGATTATAATTATTATAGTCTTTATTCTCTCTTCCGTAGTCTACCGTCATGTACAAGAATGTATGATGTTTTATCAATTCCAACTGGAAACGAATATGATGTTATTCGTTTCAAGTGGTCTGAACCAAATTGTACACAATGTGAAGCAGAGGGAAAGAGGTGTAGATGGAAGAACAATGGCACCAACAGTGAAATTGAATGTGTGGGGAAACCAAGCAACACATGGAAATTATTGGTTATTGGTGGAATCCTGGGTTCTTTGCTTCTTGTTCTACTGATGATTGCAGCATATCGGGTATACAGCGCTGACAGAAAGGAAAAAGAGAGTCGATTAAGAATTGAAAGATTCTTGGAAGATTACAAAGCACTCAAACCGAGCAGGTATTTGTACGCAGATATTAAGAGGATTACAGATCACTTCAAGGACAAGTTGGGCCAAGGAGCCTATGGAACTGTCTTCAAAGGAAGGCTTTCTTCTGAATTCCTTATTGCTGTCAAAGTCCTCAACAGTTCTAAGGGAGATGGGGAAGAGTTCGTAAATGAAGTGCGAACCATGGGTCATATCCACCACGTCAACGTGGCTCGCTTGGTTGGATTTTGTGCCGATGGATTTGTACGAGCTCTTGTTTACGAGTTCTTCCCCAATGGTTCCCTGCAAGATTTCATTTCATCTGCAGATAGTAAGAATTCCTTCCTTGGTTGGGATAAATTGCAAAATATTGCCCTCGGCATAGCCAAAGGAATTGAATATCTTCACCAAGGATGTGATCAACGAATCCTCCATTTCGATATCAAACCCCACAATGTTTTGCTAGACCAAAACTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCTAAGGATCAAAGCTTGGTGTCTATGACTACAGCTAGGGGGACCATGGGATACATTGCACCCGAAGTGTTCTCCAGGAATTTTGGAAATGTGTCTTACAAGGCAGATGTCTATAGCTTTGGAATGCTGCTGCTCGAGATGGTAGGAGGAAGGAAGAATATTGGTTCAACCATAGAGAACACCACAAATGAAATTTACTATCCACAGTGGATTTATAATCTTCTAGAGGAAGGGGATGACCTACGAATCGAAATTGGGGAAGAAGGAGATGGTAAAATTCCAAGAAAACTTGCAATTATAGGGCTATGGTGTATCCAGTGGCACCCGGTGGATCGTCCTTCCATGAAAGTAGTGGCTCAGATGTTAGAAGGAGACGGAGAAAGCTTGACCATGCCGCCTAATCCCTTTGTTTCTACAGGTCCTACAACTAAAAATGGAAGCATTCCGGCAAGACGACTAGAATTGGAACCAATTGCTGAACTAGAGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

606

Amino Acids

68.46

Weight (kDa)

8.01

Isoelectric Point (pI)

41.79

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
Pkinase PF00069 295 - 563 5.5e-45 Protein kinase domain
PK_Tyr_Ser-Thr PF07714 295 - 564 1.3e-42 Protein tyrosine and serine/threonine kinase
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 2 cut(s) 471, 1545
AatII GACGTC 1 cut(s) 345
Acc36I ACCTGC 1 cut(s) 834
AccB1I GGYRCC 2 cut(s) 644, 1650
AccB7I CCANNNNNTGG 1 cut(s) 377
AccI GTMKAC 2 cut(s) 505, 762
AciI CCGC 2 cut(s) 136, 1724
AclI AACGTT 1 cut(s) 351
AclWI GGATC 3 cut(s) 146, 1344, 1668
AcoI YGGCCR 1 cut(s) 1317
AcsI RAATTY 7 cut(s) 203, 944, 1150, 1299, 1408, 1521, 1605
AcyI GRCGYC 1 cut(s) 342
AdeI CACNNNGTG 2 cut(s) 605, 1657
AfaI GTAC 4 cut(s) 517, 598, 854, 1080
AfeI AGCGCT 1 cut(s) 769
AfiI CCNNNNNNNGG 3 cut(s) 377, 410, 1165
AflIII ACRYGT 1 cut(s) 306
AgsI TTSAA 9 cut(s) 52, 164, 577, 662, 806, 886, 925, 1211, 1497
AhlI ACTAGT 1 cut(s) 55
AjiI CACGTC 1 cut(s) 1036
AjnI CCWGG 5 cut(s) 39, 154, 418, 714, 1403
AluBI AGCT 6 cut(s) 366, 1085, 1344, 1364, 1446, 1713
AluI AGCT 6 cut(s) 366, 1085, 1344, 1364, 1446, 1713
Alw21I GWGCWC 2 cut(s) 83, 1087
Alw26I GTCTC 1 cut(s) 1695
AlwI GGATC 3 cut(s) 146, 1344, 1668
Ama87I CYCGRG 1 cut(s) 1463
Aor51HI AGCGCT 1 cut(s) 769
AoxI GGCC 3 cut(s) 109, 898, 1317
ApeKI GCWGC 6 cut(s) 184, 277, 366, 749, 1456, 1459
ApoI RAATTY 7 cut(s) 203, 944, 1150, 1299, 1408, 1521, 1605
ArsI GACNNNNNNTTYG 2 cut(s) 1006, 1038
Asp700I GAANNNNTTC 4 cut(s) 11, 934, 1154, 1215
AspLEI GCGC 3 cut(s) 135, 219, 770
AspS9I GGNCC 4 cut(s) 110, 898, 1371, 1748
AsuC2I CCSGG 2 cut(s) 113, 1655
AsuHPI GGTGA 2 cut(s) 425, 1211
AvaI CYCGRG 1 cut(s) 1463
AvaII GGWCC 2 cut(s) 1371, 1748
BalI TGGCCA 1 cut(s) 1319
BanI GGYRCC 2 cut(s) 644, 1650
BanII GRGCYC 1 cut(s) 1087
BbsI GAAGAC 1 cut(s) 913
Bbv12I GWGCWC 2 cut(s) 83, 1087
BbvI GCAGC 6 cut(s) 196, 264, 353, 761, 1443, 1446
BccI CCATC 5 cut(s) 624, 980, 1064, 1462, 1592
BciT130I CCWGG 5 cut(s) 41, 156, 420, 716, 1405
BciVI GTATCC 2 cut(s) 1373, 1652
BclI TGATCA 2 cut(s) 103, 1231
BcnI CCSGG 2 cut(s) 113, 1655
BcoDI GTCTC 1 cut(s) 1695
BcuI ACTAGT 1 cut(s) 55
BfaI CTAG 7 cut(s) 56, 197, 1277, 1365, 1553, 1787, 1811
BfmI CTRYAG 4 cut(s) 1137, 1359, 1441, 1743
BfoI RGCGCY 1 cut(s) 771
BfuAI ACCTGC 1 cut(s) 834
BfuI GTATCC 2 cut(s) 1373, 1652
BisI GCNGC 8 cut(s) 136, 185, 278, 367, 750, 1457, 1460, 1724
BlsI GCNGC 8 cut(s) 137, 186, 279, 368, 751, 1458, 1461, 1725
Bme1390I CCNGG 7 cut(s) 41, 113, 156, 420, 716, 1405, 1655
Bme18I GGWCC 2 cut(s) 1371, 1748
BmeT110I CYCGRG 1 cut(s) 1463
BmgBI CACGTC 1 cut(s) 1036
BmgT120I GGNCC 4 cut(s) 110, 898, 1371, 1748
BmiI GGNNCC 6 cut(s) 646, 907, 1114, 1372, 1652, 1797
BmrFI CCNGG 7 cut(s) 41, 113, 156, 420, 716, 1405, 1655
BmsI GCATC 1 cut(s) 151
BpiI GAAGAC 1 cut(s) 913
BpmI CTGGAG 1 cut(s) 1387
BpuMI CCSGG 2 cut(s) 113, 1655
BsaAI YACGTR 1 cut(s) 78
BsaHI GRCGYC 1 cut(s) 342
BsaXI ACNNNNNCTCC 2 cut(s) 1227, 1257
Bsc4I CCNNNNNNNGG 3 cut(s) 377, 410, 1165
Bse1I ACTGG 2 cut(s) 553, 1645
Bse3DI GCAATG 3 cut(s) 106, 128, 1383
BseBI CCWGG 5 cut(s) 41, 156, 420, 716, 1405
BseGI GGATG 2 cut(s) 1232, 1570
BseLI CCNNNNNNNGG 3 cut(s) 377, 410, 1165
BseMI GCAATG 3 cut(s) 106, 128, 1383
BseMII CTCAG 1 cut(s) 1700
BseNI ACTGG 2 cut(s) 553, 1645
BseXI GCAGC 6 cut(s) 196, 264, 353, 761, 1443, 1446
BshFI GGCC 3 cut(s) 111, 900, 1319
BshNI GGYRCC 2 cut(s) 644, 1650
BsiHKAI GWGCWC 2 cut(s) 83, 1087
BsiHKCI CYCGRG 1 cut(s) 1463
BsiSI CCGG 3 cut(s) 113, 1655, 1775
BslFI GGGAC 2 cut(s) 386, 1384
BslI CCNNNNNNNGG 3 cut(s) 377, 410, 1165
BsmAI GTCTC 1 cut(s) 1695
BsmBI CGTCTC 1 cut(s) 1695
BsmFI GGGAC 2 cut(s) 386, 1384
BsmI GAATGC 3 cut(s) 170, 1458, 1770
BsnI GGCC 3 cut(s) 111, 900, 1319
BsoBI CYCGRG 1 cut(s) 1463
Bsp1286I GDGCHC 2 cut(s) 83, 1087
Bsp1407I TGTACA 2 cut(s) 515, 596
Bsp143I GATC 6 cut(s) 103, 151, 877, 1231, 1336, 1660
Bsp19I CCATGG 2 cut(s) 1017, 1374
BspACI CCGC 2 cut(s) 136, 1724
BspANI GGCC 3 cut(s) 111, 900, 1319
BspCNI CTCAG 1 cut(s) 1699
BspLI GGNNCC 6 cut(s) 646, 907, 1114, 1372, 1652, 1797
BspMAI CTGCAG 1 cut(s) 1141
BspMI ACCTGC 1 cut(s) 834
BspPI GGATC 3 cut(s) 146, 1344, 1668
BspT107I GGYRCC 2 cut(s) 644, 1650
BsrDI GCAATG 3 cut(s) 106, 128, 1383
BsrGI TGTACA 2 cut(s) 515, 596
BsrI ACTGG 2 cut(s) 553, 1645
BssMI GATC 6 cut(s) 103, 151, 877, 1231, 1336, 1660
BssNAI GTATAC 1 cut(s) 763
BssNI GRCGYC 1 cut(s) 342
BssT1I CCWWGG 5 cut(s) 901, 1017, 1159, 1222, 1374
Bst1107I GTATAC 1 cut(s) 763
Bst2UI CCWGG 5 cut(s) 41, 156, 420, 716, 1405
Bst4CI ACNGT 5 cut(s) 510, 653, 919, 974, 1536
Bst6I CTCTTC 3 cut(s) 25, 500, 987
BstACI GRCGYC 1 cut(s) 342
BstAUI TGTACA 2 cut(s) 515, 596
BstBAI YACGTR 1 cut(s) 78
BstC8I GCNNGC 5 cut(s) 67, 140, 252, 275, 1048
BstDEI CTNAG 3 cut(s) 978, 1332, 1686
BstDSI CCRYGG 2 cut(s) 1017, 1374
BstEII GGTNACC 1 cut(s) 413
BstF5I GGATG 2 cut(s) 1232, 1570
BstH2I RGCGCY 1 cut(s) 771
BstHHI GCGC 3 cut(s) 135, 219, 770
BstKTI GATC 6 cut(s) 106, 154, 880, 1234, 1339, 1663
BstMAI GTCTC 1 cut(s) 1695
BstMBI GATC 6 cut(s) 103, 151, 877, 1231, 1336, 1660
BstMWI GCNNNNNNNGC 2 cut(s) 139, 286
BstNI CCWGG 5 cut(s) 41, 156, 420, 716, 1405
BstNSI RCATGY 3 cut(s) 34, 254, 310
BstPI GGTNACC 1 cut(s) 413
BstSCI CCNGG 7 cut(s) 39, 111, 154, 418, 714, 1403, 1653
BstSFI CTRYAG 4 cut(s) 1137, 1359, 1441, 1743
BstV1I GCAGC 6 cut(s) 196, 264, 353, 761, 1443, 1446
BstV2I GAAGAC 1 cut(s) 913
BstZ17I GTATAC 1 cut(s) 763
BsuI GTATCC 2 cut(s) 1373, 1652
BsuRI GGCC 3 cut(s) 111, 900, 1319
BtgI CCRYGG 2 cut(s) 1017, 1374
BtrI CACGTC 1 cut(s) 1036
BtsCI GGATG 2 cut(s) 1232, 1570
BtsIMutI CAGTG 3 cut(s) 658, 1541, 1652
BveI ACCTGC 1 cut(s) 834
Cac8I GCNNGC 5 cut(s) 67, 140, 252, 275, 1048
CfoI GCGC 3 cut(s) 135, 219, 770
Cfr13I GGNCC 4 cut(s) 110, 898, 1371, 1748
CseI GACGC 1 cut(s) 221
Csp6I GTAC 4 cut(s) 516, 597, 853, 1079
CviAII CATG 9 cut(s) 31, 251, 307, 513, 687, 1018, 1375, 1672, 1720
CviQI GTAC 4 cut(s) 516, 597, 853, 1079
DdeI CTNAG 3 cut(s) 978, 1332, 1686
DpnI GATC 6 cut(s) 105, 153, 879, 1233, 1338, 1662
DpnII GATC 6 cut(s) 103, 151, 877, 1231, 1336, 1660
DraIII CACNNNGTG 2 cut(s) 605, 1657
EaeI YGGCCR 1 cut(s) 1317
Eam1104I CTCTTC 3 cut(s) 25, 500, 987
EarI CTCTTC 3 cut(s) 25, 500, 987
Ecl136II GAGCTC 1 cut(s) 1085
Eco130I CCWWGG 5 cut(s) 901, 1017, 1159, 1222, 1374
Eco24I GRGCYC 1 cut(s) 1087
Eco32I GATATC 1 cut(s) 1255
Eco47I GGWCC 2 cut(s) 1371, 1748
Eco47III AGCGCT 1 cut(s) 769
Eco53kI GAGCTC 1 cut(s) 1085
Eco88I CYCGRG 1 cut(s) 1463
Eco91I GGTNACC 1 cut(s) 413
EcoICRI GAGCTC 1 cut(s) 1085
EcoO109I RGGNCCY 1 cut(s) 1748
EcoO65I GGTNACC 1 cut(s) 413
EcoRI GAATTC 2 cut(s) 944, 1150
EcoRII CCWGG 5 cut(s) 39, 154, 418, 714, 1403
EcoRV GATATC 1 cut(s) 1255
EcoT14I CCWWGG 5 cut(s) 901, 1017, 1159, 1222, 1374
EcoT38I GRGCYC 1 cut(s) 1087
ErhI CCWWGG 5 cut(s) 901, 1017, 1159, 1222, 1374
Esp3I CGTCTC 1 cut(s) 1695
FaeI CATG 9 cut(s) 34, 254, 310, 516, 690, 1021, 1378, 1675, 1723
FalI AAGNNNNNCTT 6 cut(s) 918, 950, 922, 954, 1139, 1171
FaqI GGGAC 2 cut(s) 386, 1384
FatI CATG 9 cut(s) 30, 250, 306, 512, 686, 1017, 1374, 1671, 1719
FbaI TGATCA 2 cut(s) 103, 1231
FblI GTMKAC 2 cut(s) 505, 762
Fnu4HI GCNGC 8 cut(s) 136, 185, 278, 367, 750, 1457, 1460, 1724
FokI GGATG 2 cut(s) 1239, 1577
FriOI GRGCYC 1 cut(s) 1087
Fsp4HI GCNGC 8 cut(s) 136, 185, 278, 367, 750, 1457, 1460, 1724
FspBI CTAG 7 cut(s) 56, 197, 1277, 1365, 1553, 1787, 1811
GlaI GCGC 3 cut(s) 134, 218, 769
GluI GCNGC 8 cut(s) 136, 185, 278, 367, 750, 1457, 1460, 1724
GsuI CTGGAG 1 cut(s) 1387
HaeII RGCGCY 1 cut(s) 771
HaeIII GGCC 3 cut(s) 111, 900, 1319
HapII CCGG 3 cut(s) 113, 1655, 1775
HgaI GACGC 1 cut(s) 221
HhaI GCGC 3 cut(s) 135, 219, 770
Hin1I GRCGYC 1 cut(s) 342
Hin1II CATG 9 cut(s) 34, 254, 310, 516, 690, 1021, 1378, 1675, 1723
Hin6I GCGC 3 cut(s) 133, 217, 768
HinP1I GCGC 3 cut(s) 133, 217, 768
HincII GTYRAC 1 cut(s) 1039
HindII GTYRAC 1 cut(s) 1039
HindIII AAGCTT 2 cut(s) 1342, 1711
HinfI GANTC 6 cut(s) 394, 711, 790, 810, 1239, 1575
HpaII CCGG 3 cut(s) 113, 1655, 1775
HphI GGTGA 2 cut(s) 425, 1211
Hpy166II GTNNAC 5 cut(s) 506, 599, 763, 1039, 1093
Hpy188I TCNGA 5 cut(s) 174, 586, 943, 1306, 1689
Hpy188III TCNNGA 3 cut(s) 236, 1465, 1553
Hpy8I GTNNAC 5 cut(s) 506, 599, 763, 1039, 1093
Hpy99I CGWCG 1 cut(s) 344
HpyAV CCTTC 8 cut(s) 331, 924, 1165, 1473, 1553, 1586, 1677, 1691
HpyCH4III ACNGT 5 cut(s) 510, 653, 919, 974, 1536
HpyCH4IV ACGT 6 cut(s) 77, 342, 351, 383, 1035, 1041
HpyF10VI GCNNNNNNNGC 2 cut(s) 139, 286
HpyF3I CTNAG 3 cut(s) 978, 1332, 1686
HpySE526I ACGT 6 cut(s) 77, 342, 351, 383, 1035, 1041
Hsp92I GRCGYC 1 cut(s) 342
Hsp92II CATG 9 cut(s) 34, 254, 310, 516, 690, 1021, 1378, 1675, 1723
HspAI GCGC 3 cut(s) 133, 217, 768
Ksp22I TGATCA 2 cut(s) 103, 1231
Kzo9I GATC 6 cut(s) 103, 151, 877, 1231, 1336, 1660
LmnI GCTCC 2 cut(s) 62, 905
Lsp1109I GCAGC 6 cut(s) 196, 264, 353, 761, 1443, 1446
LweI GCATC 1 cut(s) 151
MaeI CTAG 7 cut(s) 56, 197, 1277, 1365, 1553, 1787, 1811
MaeII ACGT 6 cut(s) 77, 342, 351, 383, 1035, 1041
MaeIII GTNAC 3 cut(s) 309, 352, 413
MalI GATC 6 cut(s) 105, 153, 879, 1233, 1338, 1662
MboI GATC 6 cut(s) 103, 151, 877, 1231, 1336, 1660
MfeI CAATTG 1 cut(s) 1800
MhlI GDGCHC 2 cut(s) 83, 1087
MlsI TGGCCA 1 cut(s) 1319
MluNI TGGCCA 1 cut(s) 1319
MlyI GAGTC 2 cut(s) 403, 799
MmeI TCCRAC 4 cut(s) 40, 358, 569, 1036
MnlI CCTC 9 cut(s) 419, 607, 615, 861, 977, 1199, 1253, 1469, 1549
Mox20I TGGCCA 1 cut(s) 1319
MroXI GAANNNNTTC 4 cut(s) 11, 934, 1154, 1215
MscI TGGCCA 1 cut(s) 1319
MseI TTAA 3 cut(s) 294, 797, 864
MslI CAYNNNNRTG 2 cut(s) 147, 453
Msp20I TGGCCA 1 cut(s) 1319
MspA1I CMGCKG 1 cut(s) 366
MspI CCGG 3 cut(s) 113, 1655, 1775
MspR9I CCNGG 7 cut(s) 41, 113, 156, 420, 716, 1405, 1655
MunI CAATTG 1 cut(s) 1800
Mva1269I GAATGC 3 cut(s) 170, 1458, 1770
MvaI CCWGG 5 cut(s) 41, 156, 420, 716, 1405
MwoI GCNNNNNNNGC 2 cut(s) 139, 286
NciI CCSGG 2 cut(s) 113, 1655
NcoI CCATGG 2 cut(s) 1017, 1374
NdeII GATC 6 cut(s) 103, 151, 877, 1231, 1336, 1660
NlaIII CATG 9 cut(s) 34, 254, 310, 516, 690, 1021, 1378, 1675, 1723
NlaIV GGNNCC 6 cut(s) 646, 907, 1114, 1372, 1652, 1797
NmeAIII GCCGAG 1 cut(s) 1170
NmuCI GTSAC 2 cut(s) 309, 413
NspI RCATGY 3 cut(s) 34, 254, 310
PaeI GCATGC 1 cut(s) 254
PaeR7I CTCGAG 1 cut(s) 1463
PciI ACATGT 1 cut(s) 306
PcsI WCGNNNNNNNCGW 1 cut(s) 348
PctI GAATGC 3 cut(s) 170, 1458, 1770
PdmI GAANNNNTTC 4 cut(s) 11, 934, 1154, 1215
PfeI GAWTC 4 cut(s) 711, 810, 1239, 1575
PflMI CCANNNNNTGG 1 cut(s) 377
PfoI TCCNGGA 1 cut(s) 1403
PkrI GCNGC 8 cut(s) 137, 186, 279, 368, 751, 1458, 1461, 1725
PleI GAGTC 2 cut(s) 402, 798
PpsI GAGTC 2 cut(s) 402, 798
Ppu21I YACGTR 1 cut(s) 78
PpuMI RGGWCCY 1 cut(s) 1748
PscI ACATGT 1 cut(s) 306
PsiI TTATAA 2 cut(s) 471, 1545
Psp124BI GAGCTC 1 cut(s) 1087
Psp1406I AACGTT 1 cut(s) 351
Psp5II RGGWCCY 1 cut(s) 1748
Psp6I CCWGG 5 cut(s) 39, 154, 418, 714, 1403
PspEI GGTNACC 1 cut(s) 413
PspGI CCWGG 5 cut(s) 39, 154, 418, 714, 1403
PspN4I GGNNCC 6 cut(s) 646, 907, 1114, 1372, 1652, 1797
PspPI GGNCC 4 cut(s) 110, 898, 1371, 1748
PspPPI RGGWCCY 1 cut(s) 1748
PstI CTGCAG 1 cut(s) 1141
PvuII CAGCTG 1 cut(s) 366
RsaI GTAC 4 cut(s) 517, 598, 854, 1080
RsaNI GTAC 4 cut(s) 516, 597, 853, 1079
RseI CAYNNNNRTG 2 cut(s) 147, 453
SacI GAGCTC 1 cut(s) 1087
SaqAI TTAA 3 cut(s) 294, 797, 864
SatI GCNGC 8 cut(s) 136, 185, 278, 367, 750, 1457, 1460, 1724
Sau3AI GATC 6 cut(s) 103, 151, 877, 1231, 1336, 1660
Sau96I GGNCC 4 cut(s) 110, 898, 1371, 1748
SchI GAGTC 2 cut(s) 403, 799
ScrFI CCNGG 7 cut(s) 41, 113, 156, 420, 716, 1405, 1655
SduI GDGCHC 2 cut(s) 83, 1087
SfaNI GCATC 1 cut(s) 151
SfcI CTRYAG 4 cut(s) 1137, 1359, 1441, 1743
Sfr274I CTCGAG 1 cut(s) 1463
SinI GGWCC 2 cut(s) 1371, 1748
SlaI CTCGAG 1 cut(s) 1463
SmiMI CAYNNNNRTG 2 cut(s) 147, 453
SmlI CTYRAG 1 cut(s) 1463
SmoI CTYRAG 1 cut(s) 1463
SpeI ACTAGT 1 cut(s) 55
SphI GCATGC 1 cut(s) 254
SsiI CCGC 2 cut(s) 136, 1724
SspI AATATT 2 cut(s) 1183, 1489
SspMI CTAG 7 cut(s) 56, 197, 1277, 1365, 1553, 1787, 1811
SstI GAGCTC 1 cut(s) 1087
StyD4I CCNGG 7 cut(s) 39, 111, 154, 418, 714, 1403, 1653
StyI CCWWGG 5 cut(s) 901, 1017, 1159, 1222, 1374
TaaI ACNGT 5 cut(s) 510, 653, 919, 974, 1536
TaiI ACGT 6 cut(s) 80, 345, 354, 386, 1038, 1044
TaqI TCGA 6 cut(s) 83, 339, 793, 1251, 1464, 1578
TatI WGTACW 2 cut(s) 515, 596
TauI GCSGC 2 cut(s) 138, 1726
TfiI GAWTC 4 cut(s) 711, 810, 1239, 1575
Tru1I TTAA 3 cut(s) 294, 797, 864
Tru9I TTAA 3 cut(s) 294, 797, 864
TscAI CASTG 3 cut(s) 658, 1541, 1652
TseFI GTSAC 2 cut(s) 309, 413
TseI GCWGC 6 cut(s) 184, 277, 366, 749, 1456, 1459
Tsp45I GTSAC 2 cut(s) 309, 413
TspDTI ATGAA 6 cut(s) 4, 1020, 1117, 1122, 1533, 1688
TspGWI ACGGA 2 cut(s) 488, 1719
TspRI CASTG 3 cut(s) 658, 1541, 1652
Van91I CCANNNNNTGG 1 cut(s) 377
VpaK11BI GGWCC 2 cut(s) 1371, 1748
XapI RAATTY 7 cut(s) 203, 944, 1150, 1299, 1408, 1521, 1605
XbaI TCTAGA 1 cut(s) 1552
XceI RCATGY 3 cut(s) 34, 254, 310
XcmI CCANNNNNNNNNTGG 3 cut(s) 684, 908, 1678
XhoI CTCGAG 1 cut(s) 1463
XmiI GTMKAC 2 cut(s) 505, 762
XmnI GAANNNNTTC 4 cut(s) 11, 934, 1154, 1215
XspI CTAG 7 cut(s) 56, 197, 1277, 1365, 1553, 1787, 1811
ZraI GACGTC 1 cut(s) 343
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.