Rmu_sc0004646.1_g000044

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_multiflora
Rmu_sc0004646.1
OG0000107
Physical Location & Seq
Forward (+)
154307 .. 156579
2273 bp
Loading structure...
UTR
Exon/CDS
Intron
Rmu_sc0004646.1_g000044.1.cds

Sequence Viewer

Length: 1824 bp
atgcagcaaactctcatttcttccttttgcttcatcttgctggctttctcctccaaagtccttggtgaaaaaccgaggtgtgggaaacatggcccagctatcaaattcccttttagcttcaaaggtagccagcccccagaaaattctgggtatcctgggtttcttgtatcctgcaatgaaaagcaggaacccattcttgagctgccaatcccagttaaattcccaatcaaaaccatagactataaggctcagaaaatccacctatatgacccagaaaattgcttgctgatgaaactattgaaagtccacaacatgccgatctctcccttcaactactcaacagaccaaatgattgatattaccttattcaattgttctttacctgaaagggaatcatcgtactatatggatccagtcccctgctttacaggccctggctaccaaatctattcggtttcttcttcccaaaacattgaggacttgcccctcctgtcttgtacaaagatgcgtaatctttcactagttccatacagccacgagatgtttgcacctccaactccaaatcttcatttggaatggtctgaaccaaattgtagaccgtgtgaagcacatggcaagatatgcagattgaagaagtatggcaccactagtactgaaattgaatgccttcccaggaagaaagaaggttcagaaacaaagttagtagccactggggcatccctgggttcatttgtactcatactacttgctgctgcagcttatcatgtctatagttctgacagaaaagaaaaacagaatcaattaaaaattgaaaattttttagaggattacagagctctcaaaccaagcagatactcctatgcagatatcaagaggattacaaatcagttcaaggacaaattaggccaaggagcctatggaactgtttataagggaaagctttcttctgaatgttttgttgctgtcaaagtcctcaatagtacaaagggggatggggaagagtttgtaaatgaagtgggaacaatgggtcatatccaccatgtcaatgtggttcgcttggttggattctgcgctgatgggtttagacgagctcttgtttatgacttcttacctaatggttcactgcaagatttcatttcatcagcagactataacaattctttccttggttgggataagttgcaagatattgccctaggcatagccaaaggaattgaatatctacaccaaggatgcgatcaacgaatcctccatttcgatatcaaaccccacaatgttttgcttgaccataacttcaccccaaagatttctgattttggtttggccaagttatgctccaaggatcagagtatagtgtcaatgactacagctaggggaacgatggggtacattgcacctgaagtgttctccagaaactttggaaatgtatcctataagtcagatgtgtatagttatggaatggtactgctcgagatggtaggaggaagaaagaacatcagttcaaccacagagaacacaactgaagtttactacccagaatggatctataatctactggaagaaggtgaagaccttcgaatccatgttggcgaagaaggagatgctaaaattgcaaagagacttgcgattgtaggtctctggtgtatccaatggcacccggtagatcgtccttctatgaaaggggtggttcagatgttggaaggaggagaaaacttaactatgcctccaaatcctttttcctctcaaggtcctacaggaacaagtgcaagtacacctgccagaagattaaaccttcaactggaagcaattgccgagttagagtaa
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

607

Amino Acids

67.97

Weight (kDa)

6.61

Isoelectric Point (pI)

41.76

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 930
AarI CACCTGC 1 cut(s) 1783
Acc36I ACCTGC 1 cut(s) 1783
AccB1I GGYRCC 2 cut(s) 641, 1653
AccI GTMKAC 1 cut(s) 595
AclWI GGATC 4 cut(s) 404, 417, 1350, 1550
AcoI YGGCCR 1 cut(s) 1323
AcsI RAATTY 4 cut(s) 104, 142, 218, 814
AcuI CTGAAG 2 cut(s) 1419, 1542
AfaI GTAC 8 cut(s) 401, 499, 652, 735, 982, 1388, 1464, 1771
AfiI CCNNNNNNNGG 3 cut(s) 80, 1171, 1798
AhlI ACTAGT 2 cut(s) 520, 647
AjnI CCWGG 4 cut(s) 154, 433, 671, 720
AjuI GAANNNNNNNTTGG 2 cut(s) 1720, 1752
AluBI AGCT 8 cut(s) 98, 117, 202, 758, 836, 940, 1091, 1370
AluI AGCT 8 cut(s) 98, 117, 202, 758, 836, 940, 1091, 1370
Alw21I GWGCWC 2 cut(s) 838, 1093
Alw26I GTCTC 2 cut(s) 1612, 1640
AlwI GGATC 4 cut(s) 404, 417, 1350, 1550
AlwNI CAGNNNCTG 1 cut(s) 434
Ama87I CYCGRG 1 cut(s) 1469
AoxI GGCC 4 cut(s) 91, 430, 904, 1323
ApeKI GCWGC 5 cut(s) 4, 202, 749, 752, 755
ApoI RAATTY 4 cut(s) 104, 142, 218, 814
Asp700I GAANNNNTTC 4 cut(s) 192, 666, 940, 1572
AspA2I CCTAGG 1 cut(s) 1195
AspLEI GCGC 1 cut(s) 1073
AspS9I GGNCC 3 cut(s) 92, 431, 1748
AsuC2I CCSGG 1 cut(s) 1658
AsuHPI GGTGA 3 cut(s) 77, 1288, 1577
AsuII TTCGAA 1 cut(s) 1576
AvaI CYCGRG 1 cut(s) 1469
AvaII GGWCC 1 cut(s) 1748
AvrII CCTAGG 1 cut(s) 1195
BalI TGGCCA 1 cut(s) 1325
BamHI GGATCC 1 cut(s) 409
BanI GGYRCC 2 cut(s) 641, 1653
BanII GRGCYC 2 cut(s) 838, 1093
BauI CACGAG 1 cut(s) 536
BbsI GAAGAC 1 cut(s) 1575
Bbv12I GWGCWC 2 cut(s) 838, 1093
BbvI GCAGC 5 cut(s) 16, 189, 736, 739, 767
BccI CCATC 4 cut(s) 986, 1070, 1375, 1468
BcgI CGANNNNNNTGC 2 cut(s) 527, 561
BciT130I CCWGG 4 cut(s) 156, 435, 673, 722
BciVI GTATCC 4 cut(s) 162, 178, 1438, 1655
BcnI CCSGG 1 cut(s) 1658
BcoDI GTCTC 2 cut(s) 1612, 1640
BcuI ACTAGT 2 cut(s) 520, 647
BfaI CTAG 4 cut(s) 521, 648, 1196, 1371
BfmI CTRYAG 4 cut(s) 753, 769, 1365, 1752
BfuAI ACCTGC 1 cut(s) 1783
BfuI GTATCC 4 cut(s) 162, 178, 1438, 1655
BglI GCCNNNNNGGC 1 cut(s) 713
BisI GCNGC 5 cut(s) 5, 203, 750, 753, 756
BlnI CCTAGG 1 cut(s) 1195
BlsI GCNGC 5 cut(s) 6, 204, 751, 754, 757
BmcAI AGTACT 1 cut(s) 652
Bme1390I CCNGG 5 cut(s) 156, 435, 673, 722, 1658
Bme18I GGWCC 1 cut(s) 1748
BmeT110I CYCGRG 1 cut(s) 1469
BmgT120I GGNCC 3 cut(s) 92, 431, 1748
BmiI GGNNCC 5 cut(s) 189, 411, 643, 913, 1655
BmrFI CCNGG 5 cut(s) 156, 435, 673, 722, 1658
BmrI ACTGGG 2 cut(s) 206, 720
BmsI GCATC 4 cut(s) 495, 725, 1223, 1591
BmuI ACTGGG 2 cut(s) 206, 720
BpiI GAAGAC 1 cut(s) 1575
BpmI CTGGAG 1 cut(s) 1393
Bpu14I TTCGAA 1 cut(s) 1576
BpuEI CTTGAG 2 cut(s) 218, 1728
BpuMI CCSGG 1 cut(s) 1658
BsaI GGTCTC 1 cut(s) 1640
BsaXI ACNNNNNCTCC 4 cut(s) 1233, 1263, 1708, 1738
Bsc4I CCNNNNNNNGG 3 cut(s) 80, 1171, 1798
Bse1I ACTGG 5 cut(s) 212, 413, 715, 1560, 1803
Bse3DI GCAATG 2 cut(s) 181, 1389
BseBI CCWGG 4 cut(s) 156, 435, 673, 722
BseGI GGATG 3 cut(s) 716, 997, 1238
BseLI CCNNNNNNNGG 3 cut(s) 80, 1171, 1798
BseMI GCAATG 2 cut(s) 181, 1389
BseMII CTCAG 1 cut(s) 263
BseNI ACTGG 5 cut(s) 212, 413, 715, 1560, 1803
BseRI GAGGAG 2 cut(s) 40, 1719
BseXI GCAGC 5 cut(s) 16, 189, 736, 739, 767
BseYI CCCAGC 1 cut(s) 94
BshFI GGCC 4 cut(s) 93, 432, 906, 1325
BshNI GGYRCC 2 cut(s) 641, 1653
BsiHKAI GWGCWC 2 cut(s) 838, 1093
BsiHKCI CYCGRG 1 cut(s) 1469
BsiSI CCGG 1 cut(s) 1658
BslFI GGGAC 1 cut(s) 401
BslI CCNNNNNNNGG 3 cut(s) 80, 1171, 1798
BsmAI GTCTC 2 cut(s) 1612, 1640
BsmFI GGGAC 1 cut(s) 401
BsmI GAATGC 1 cut(s) 668
BsnI GGCC 4 cut(s) 93, 432, 906, 1325
Bso31I GGTCTC 1 cut(s) 1640
BsoBI CYCGRG 1 cut(s) 1469
Bsp119I TTCGAA 1 cut(s) 1576
Bsp1286I GDGCHC 2 cut(s) 838, 1093
Bsp1407I TGTACA 1 cut(s) 497
Bsp143I GATC 6 cut(s) 318, 409, 1237, 1342, 1542, 1663
BspANI GGCC 4 cut(s) 93, 432, 906, 1325
BspCNI CTCAG 1 cut(s) 262
BspLI GGNNCC 5 cut(s) 189, 411, 643, 913, 1655
BspMAI CTGCAG 1 cut(s) 757
BspMI ACCTGC 1 cut(s) 1783
BspPI GGATC 4 cut(s) 404, 417, 1350, 1550
BspT104I TTCGAA 1 cut(s) 1576
BspT107I GGYRCC 2 cut(s) 641, 1653
BspTNI GGTCTC 1 cut(s) 1640
BsrDI GCAATG 2 cut(s) 181, 1389
BsrGI TGTACA 1 cut(s) 497
BsrI ACTGG 5 cut(s) 212, 413, 715, 1560, 1803
BssMI GATC 6 cut(s) 318, 409, 1237, 1342, 1542, 1663
BssSI CACGAG 1 cut(s) 536
BssT1I CCWWGG 6 cut(s) 61, 907, 1165, 1195, 1228, 1338
Bst2BI CACGAG 1 cut(s) 536
Bst2UI CCWGG 4 cut(s) 156, 435, 673, 722
Bst4CI ACNGT 2 cut(s) 600, 925
Bst6I CTCTTC 1 cut(s) 993
BstAPI GCANNNNNTGC 1 cut(s) 621
BstAUI TGTACA 1 cut(s) 497
BstBI TTCGAA 1 cut(s) 1576
BstC8I GCNNGC 3 cut(s) 42, 131, 284
BstDEI CTNAG 1 cut(s) 249
BstF5I GGATG 3 cut(s) 716, 997, 1238
BstHHI GCGC 1 cut(s) 1073
BstKTI GATC 6 cut(s) 321, 412, 1240, 1345, 1545, 1666
BstMAI GTCTC 2 cut(s) 1612, 1640
BstMBI GATC 6 cut(s) 318, 409, 1237, 1342, 1542, 1663
BstMWI GCNNNNNNNGC 5 cut(s) 429, 621, 713, 755, 1610
BstNI CCWGG 4 cut(s) 156, 435, 673, 722
BstNSI RCATGY 1 cut(s) 316
BstSCI CCNGG 5 cut(s) 154, 433, 671, 720, 1656
BstSFI CTRYAG 4 cut(s) 753, 769, 1365, 1752
BstV1I GCAGC 5 cut(s) 16, 189, 736, 739, 767
BstV2I GAAGAC 1 cut(s) 1575
BstX2I RGATCY 2 cut(s) 409, 1542
BstYI RGATCY 2 cut(s) 409, 1542
BsuI GTATCC 4 cut(s) 162, 178, 1438, 1655
BsuRI GGCC 4 cut(s) 93, 432, 906, 1325
BtsCI GGATG 3 cut(s) 716, 997, 1238
BtsI GCAGTG 1 cut(s) 1121
BtsIMutI CAGTG 2 cut(s) 708, 1121
BveI ACCTGC 1 cut(s) 1783
Cac8I GCNNGC 3 cut(s) 42, 131, 284
CaiI CAGNNNCTG 1 cut(s) 434
CfoI GCGC 1 cut(s) 1073
Cfr13I GGNCC 3 cut(s) 92, 431, 1748
Csp6I GTAC 8 cut(s) 400, 498, 651, 734, 981, 1387, 1463, 1770
CviAII CATG 6 cut(s) 89, 313, 611, 764, 1040, 1583
CviQI GTAC 8 cut(s) 400, 498, 651, 734, 981, 1387, 1463, 1770
DdeI CTNAG 1 cut(s) 249
DpnI GATC 6 cut(s) 320, 411, 1239, 1344, 1544, 1665
DpnII GATC 6 cut(s) 318, 409, 1237, 1342, 1542, 1663
EaeI YGGCCR 1 cut(s) 1323
Eam1104I CTCTTC 1 cut(s) 993
EarI CTCTTC 1 cut(s) 993
Ecl136II GAGCTC 2 cut(s) 836, 1091
Eco130I CCWWGG 6 cut(s) 61, 907, 1165, 1195, 1228, 1338
Eco24I GRGCYC 2 cut(s) 838, 1093
Eco31I GGTCTC 1 cut(s) 1640
Eco32I GATATC 2 cut(s) 868, 1261
Eco47I GGWCC 1 cut(s) 1748
Eco53kI GAGCTC 2 cut(s) 836, 1091
Eco57I CTGAAG 2 cut(s) 1419, 1542
Eco88I CYCGRG 1 cut(s) 1469
EcoICRI GAGCTC 2 cut(s) 836, 1091
EcoO109I RGGNCCY 2 cut(s) 431, 1748
EcoRII CCWGG 4 cut(s) 154, 433, 671, 720
EcoRV GATATC 2 cut(s) 868, 1261
EcoT14I CCWWGG 6 cut(s) 61, 907, 1165, 1195, 1228, 1338
EcoT38I GRGCYC 2 cut(s) 838, 1093
ErhI CCWWGG 6 cut(s) 61, 907, 1165, 1195, 1228, 1338
FaeI CATG 6 cut(s) 92, 316, 614, 767, 1043, 1586
FaqI GGGAC 1 cut(s) 401
FatI CATG 6 cut(s) 88, 312, 610, 763, 1039, 1582
FblI GTMKAC 1 cut(s) 595
Fnu4HI GCNGC 5 cut(s) 5, 203, 750, 753, 756
FokI GGATG 3 cut(s) 703, 1004, 1245
FriOI GRGCYC 2 cut(s) 838, 1093
Fsp4HI GCNGC 5 cut(s) 5, 203, 750, 753, 756
FspBI CTAG 4 cut(s) 521, 648, 1196, 1371
GlaI GCGC 1 cut(s) 1072
GluI GCNGC 5 cut(s) 5, 203, 750, 753, 756
GsaI CCCAGC 1 cut(s) 98
GsuI CTGGAG 1 cut(s) 1393
HaeIII GGCC 4 cut(s) 93, 432, 906, 1325
HapII CCGG 1 cut(s) 1658
HhaI GCGC 1 cut(s) 1073
Hin1II CATG 6 cut(s) 92, 316, 614, 767, 1043, 1586
Hin6I GCGC 1 cut(s) 1071
HinP1I GCGC 1 cut(s) 1071
HindIII AAGCTT 1 cut(s) 938
HinfI GANTC 5 cut(s) 392, 796, 1065, 1245, 1578
HpaII CCGG 1 cut(s) 1658
HphI GGTGA 3 cut(s) 77, 1288, 1577
Hpy166II GTNNAC 5 cut(s) 307, 596, 1121, 1528, 1772
Hpy188I TCNGA 9 cut(s) 252, 583, 691, 778, 949, 1312, 1347, 1441, 1692
Hpy188III TCNNGA 4 cut(s) 197, 871, 1410, 1471
Hpy8I GTNNAC 5 cut(s) 307, 596, 1121, 1528, 1772
HpyAV CCTTC 9 cut(s) 337, 677, 677, 1556, 1583, 1589, 1680, 1694, 1802
HpyCH4III ACNGT 2 cut(s) 600, 925
HpyF10VI GCNNNNNNNGC 5 cut(s) 429, 621, 713, 755, 1610
HpyF3I CTNAG 1 cut(s) 249
Hsp92II CATG 6 cut(s) 92, 316, 614, 767, 1043, 1586
HspAI GCGC 1 cut(s) 1071
Kzo9I GATC 6 cut(s) 318, 409, 1237, 1342, 1542, 1663
LmnI GCTCC 2 cut(s) 911, 1340
Lsp1109I GCAGC 5 cut(s) 16, 189, 736, 739, 767
LweI GCATC 4 cut(s) 495, 725, 1223, 1591
MaeI CTAG 4 cut(s) 521, 648, 1196, 1371
MalI GATC 6 cut(s) 320, 411, 1239, 1344, 1544, 1665
MboI GATC 6 cut(s) 318, 409, 1237, 1342, 1542, 1663
MfeI CAATTG 2 cut(s) 370, 1806
MflI RGATCY 2 cut(s) 409, 1542
MhlI GDGCHC 2 cut(s) 838, 1093
MlsI TGGCCA 1 cut(s) 1325
MluNI TGGCCA 1 cut(s) 1325
MmeI TCCRAC 3 cut(s) 578, 1042, 1677
Mox20I TGGCCA 1 cut(s) 1325
MroXI GAANNNNTTC 4 cut(s) 192, 666, 940, 1572
MscI TGGCCA 1 cut(s) 1325
MseI TTAA 4 cut(s) 216, 803, 1715, 1787
MslI CAYNNNNRTG 2 cut(s) 264, 1044
Msp20I TGGCCA 1 cut(s) 1325
MspI CCGG 1 cut(s) 1658
MspR9I CCNGG 5 cut(s) 156, 435, 673, 722, 1658
MunI CAATTG 2 cut(s) 370, 1806
Mva1269I GAATGC 1 cut(s) 668
MvaI CCWGG 4 cut(s) 156, 435, 673, 722
MwoI GCNNNNNNNGC 5 cut(s) 429, 621, 713, 755, 1610
NciI CCSGG 1 cut(s) 1658
NdeII GATC 6 cut(s) 318, 409, 1237, 1342, 1542, 1663
NlaIII CATG 6 cut(s) 92, 316, 614, 767, 1043, 1586
NlaIV GGNNCC 5 cut(s) 189, 411, 643, 913, 1655
NspI RCATGY 1 cut(s) 316
NspV TTCGAA 1 cut(s) 1576
PaeR7I CTCGAG 1 cut(s) 1469
PaqCI CACCTGC 1 cut(s) 1783
PasI CCCWGGG 1 cut(s) 721
PctI GAATGC 1 cut(s) 668
PdmI GAANNNNTTC 4 cut(s) 192, 666, 940, 1572
PfeI GAWTC 5 cut(s) 392, 796, 1065, 1245, 1578
PkrI GCNGC 5 cut(s) 6, 204, 751, 754, 757
PpuMI RGGWCCY 1 cut(s) 1748
PsiI TTATAA 1 cut(s) 930
Psp124BI GAGCTC 2 cut(s) 838, 1093
Psp5II RGGWCCY 1 cut(s) 1748
Psp6I CCWGG 4 cut(s) 154, 433, 671, 720
PspFI CCCAGC 1 cut(s) 94
PspGI CCWGG 4 cut(s) 154, 433, 671, 720
PspN4I GGNNCC 5 cut(s) 189, 411, 643, 913, 1655
PspPI GGNCC 3 cut(s) 92, 431, 1748
PspPPI RGGWCCY 1 cut(s) 1748
PstI CTGCAG 1 cut(s) 757
PstNI CAGNNNCTG 1 cut(s) 434
PsuI RGATCY 2 cut(s) 409, 1542
RsaI GTAC 8 cut(s) 401, 499, 652, 735, 982, 1388, 1464, 1771
RsaNI GTAC 8 cut(s) 400, 498, 651, 734, 981, 1387, 1463, 1770
RseI CAYNNNNRTG 2 cut(s) 264, 1044
SacI GAGCTC 2 cut(s) 838, 1093
SaqAI TTAA 4 cut(s) 216, 803, 1715, 1787
SatI GCNGC 5 cut(s) 5, 203, 750, 753, 756
Sau3AI GATC 6 cut(s) 318, 409, 1237, 1342, 1542, 1663
Sau96I GGNCC 3 cut(s) 92, 431, 1748
ScaI AGTACT 1 cut(s) 652
ScrFI CCNGG 5 cut(s) 156, 435, 673, 722, 1658
SduI GDGCHC 2 cut(s) 838, 1093
SfaNI GCATC 4 cut(s) 495, 725, 1223, 1591
SfcI CTRYAG 4 cut(s) 753, 769, 1365, 1752
Sfr274I CTCGAG 1 cut(s) 1469
SfuI TTCGAA 1 cut(s) 1576
SinI GGWCC 1 cut(s) 1748
SlaI CTCGAG 1 cut(s) 1469
SmiMI CAYNNNNRTG 2 cut(s) 264, 1044
SmlI CTYRAG 3 cut(s) 197, 1469, 1743
SmoI CTYRAG 3 cut(s) 197, 1469, 1743
SpeI ACTAGT 2 cut(s) 520, 647
SspMI CTAG 4 cut(s) 521, 648, 1196, 1371
SstI GAGCTC 2 cut(s) 838, 1093
StyD4I CCNGG 5 cut(s) 154, 433, 671, 720, 1656
StyI CCWWGG 6 cut(s) 61, 907, 1165, 1195, 1228, 1338
TaaI ACNGT 2 cut(s) 600, 925
TaqI TCGA 3 cut(s) 1257, 1470, 1576
TatI WGTACW 5 cut(s) 497, 650, 733, 980, 1769
TfiI GAWTC 5 cut(s) 392, 796, 1065, 1245, 1578
Tru1I TTAA 4 cut(s) 216, 803, 1715, 1787
Tru9I TTAA 4 cut(s) 216, 803, 1715, 1787
TscAI CASTG 2 cut(s) 715, 1128
TseI GCWGC 5 cut(s) 4, 202, 749, 752, 755
TspDTI ATGAA 9 cut(s) 22, 192, 305, 557, 717, 1026, 1123, 1128, 1691
TspRI CASTG 2 cut(s) 715, 1128
VpaK11BI GGWCC 1 cut(s) 1748
XapI RAATTY 4 cut(s) 104, 142, 218, 814
XceI RCATGY 1 cut(s) 316
XcmI CCANNNNNNNNNTGG 1 cut(s) 914
XhoI CTCGAG 1 cut(s) 1469
XmaJI CCTAGG 1 cut(s) 1195
XmiI GTMKAC 1 cut(s) 595
XmnI GAANNNNTTC 4 cut(s) 192, 666, 940, 1572
XspI CTAG 4 cut(s) 521, 648, 1196, 1371
ZrmI AGTACT 1 cut(s) 652
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.