Rroxscaffold_159G00432810

receptor-like protein kinase

Basic Information

Type: gene
Biological Identity
rosa_roxburghii
GWHEROQ00000159
Physical Location & Seq
Reverse (-)
458294 .. 459961
1668 bp
Loading structure...
UTR
Exon/CDS
Intron
Rroxscaffold_159G00432810.1

Sequence Viewer

Length: 597 bp
ATGGAGGACTCCACAAGGCAAGTCTACTTTCCAAAATGGATCTATAATCTTTTAGAACAAGGGAATGACCTACGGATTCATATTGAGGATGAAGGAGATGCTAAGTTTGCTAGAAAACTTGCAATTGTGGGTCTTTGGTGCATGCAATGGCACCCAATAGATCGTCCTTCGATGAAAGTTGTAGTTCAAATGTTGGAAAGAGAAGAGGTCGGGGTCTCGGATCTTAGGCGAAGCCGGTGCTGTTTTCTCAGTCGGCAGCAGCGGTTCTCCAGGCCTCCTTTGATCGCTCTTTTGAAGCAGGCTCTCGGGTCAGACTCAAGGAGGTCCCAGCGATGGTGGAGGAGCGATAGAGGACAAATGAAAGGCGGGGCTGCCTTCCGGGAAGGCTGGGCTAGCCTGGGCGGTGTGACAAAGTTGGATTTTGGCAGTGGGCTTGGGCTGGTTTGGGCTTTTGGGGAGGTAGTCAATTTTTTCTCTAACCCTATTTGTCTCTTGGATGTTACCGTGTGGACTGTGTTCATTTGTTACGATGTACACCATATGGGTGTTAGGCGTCAAGATGCTCAAGATAGTGGTTCCATCTTTGGGATAGGGTAG
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families

Protein Analysis

198

Amino Acids

22.7

Weight (kDa)

8.91

Isoelectric Point (pI)

55.51

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AccB1I GGYRCC 1 cut(s) 150
AccI GTMKAC 1 cut(s) 24
AciI CCGC 3 cut(s) 262, 366, 402
AclWI GGATC 2 cut(s) 47, 228
AcyI GRCGYC 1 cut(s) 553
AfaI GTAC 1 cut(s) 534
AfiI CCNNNNNNNGG 2 cut(s) 333, 585
AgsI TTSAA 2 cut(s) 188, 295
AjnI CCWGG 2 cut(s) 269, 396
Alw26I GTCTC 2 cut(s) 220, 494
AlwI GGATC 2 cut(s) 47, 228
Ama87I CYCGRG 1 cut(s) 305
AoxI GGCC 1 cut(s) 272
ApeKI GCWGC 3 cut(s) 256, 259, 371
AspS9I GGNCC 1 cut(s) 324
AsuC2I CCSGG 1 cut(s) 380
AsuNHI GCTAGC 1 cut(s) 392
AvaI CYCGRG 1 cut(s) 305
AvaII GGWCC 1 cut(s) 324
BanI GGYRCC 1 cut(s) 150
BbvI GCAGC 3 cut(s) 268, 271, 358
BccI CCATC 2 cut(s) 327, 587
BcgI CGANNNNNNTGC 2 cut(s) 219, 253
BciT130I CCWGG 2 cut(s) 271, 398
BcnI CCSGG 1 cut(s) 380
BcoDI GTCTC 2 cut(s) 220, 494
BfaI CTAG 2 cut(s) 111, 393
BisI GCNGC 3 cut(s) 257, 260, 372
BlsI GCNGC 3 cut(s) 258, 261, 373
Bme1390I CCNGG 3 cut(s) 271, 380, 398
Bme18I GGWCC 1 cut(s) 324
BmeT110I CYCGRG 1 cut(s) 305
BmgT120I GGNCC 1 cut(s) 324
BmiI GGNNCC 3 cut(s) 152, 326, 577
BmrFI CCNGG 3 cut(s) 271, 380, 398
BmsI GCATC 2 cut(s) 88, 550
BmtI GCTAGC 1 cut(s) 396
BpmI CTGGAG 1 cut(s) 253
BpuEI CTTGAG 2 cut(s) 301, 549
BpuMI CCSGG 1 cut(s) 380
BsaHI GRCGYC 1 cut(s) 553
BsaI GGTCTC 1 cut(s) 220
BsaJI CCNNGG 1 cut(s) 397
Bsc4I CCNNNNNNNGG 2 cut(s) 333, 585
Bse118I RCCGGY 1 cut(s) 234
Bse3DI GCAATG 1 cut(s) 152
BseBI CCWGG 2 cut(s) 271, 398
BseDI CCNNGG 1 cut(s) 397
BseGI GGATG 2 cut(s) 94, 502
BseLI CCNNNNNNNGG 2 cut(s) 333, 585
BseMI GCAATG 1 cut(s) 152
BseMII CTCAG 1 cut(s) 262
BseRI GAGGAG 1 cut(s) 355
BseXI GCAGC 3 cut(s) 268, 271, 358
BseYI CCCAGC 2 cut(s) 327, 387
BshFI GGCC 1 cut(s) 274
BshNI GGYRCC 1 cut(s) 150
BsiHKCI CYCGRG 1 cut(s) 305
BsiSI CCGG 2 cut(s) 235, 379
BslFI GGGAC 1 cut(s) 310
BslI CCNNNNNNNGG 2 cut(s) 333, 585
BsmAI GTCTC 2 cut(s) 220, 494
BsmFI GGGAC 1 cut(s) 310
BsnI GGCC 1 cut(s) 274
Bso31I GGTCTC 1 cut(s) 220
BsoBI CYCGRG 1 cut(s) 305
Bsp1407I TGTACA 1 cut(s) 532
Bsp143I GATC 4 cut(s) 39, 160, 220, 282
BspACI CCGC 3 cut(s) 262, 366, 402
BspANI GGCC 1 cut(s) 274
BspCNI CTCAG 1 cut(s) 261
BspLI GGNNCC 3 cut(s) 152, 326, 577
BspOI GCTAGC 1 cut(s) 396
BspPI GGATC 2 cut(s) 47, 228
BspT107I GGYRCC 1 cut(s) 150
BspTNI GGTCTC 1 cut(s) 220
BsrDI GCAATG 1 cut(s) 152
BsrFI RCCGGY 1 cut(s) 234
BsrGI TGTACA 1 cut(s) 532
BssAI RCCGGY 1 cut(s) 234
BssECI CCNNGG 1 cut(s) 397
BssMI GATC 4 cut(s) 39, 160, 220, 282
BssNI GRCGYC 1 cut(s) 553
Bst2UI CCWGG 2 cut(s) 271, 398
Bst4CI ACNGT 2 cut(s) 505, 514
Bst6I CTCTTC 1 cut(s) 198
BstACI GRCGYC 1 cut(s) 553
BstAUI TGTACA 1 cut(s) 532
BstC8I GCNNGC 3 cut(s) 143, 300, 394
BstDEI CTNAG 3 cut(s) 102, 224, 248
BstF5I GGATG 2 cut(s) 94, 502
BstKTI GATC 4 cut(s) 42, 163, 223, 285
BstMAI GTCTC 2 cut(s) 220, 494
BstMBI GATC 4 cut(s) 39, 160, 220, 282
BstMWI GCNNNNNNNGC 2 cut(s) 107, 393
BstNI CCWGG 2 cut(s) 271, 398
BstNSI RCATGY 1 cut(s) 145
BstSCI CCNGG 3 cut(s) 269, 378, 396
BstV1I GCAGC 3 cut(s) 268, 271, 358
BstX2I RGATCY 2 cut(s) 39, 220
BstYI RGATCY 2 cut(s) 39, 220
BsuRI GGCC 1 cut(s) 274
BtgZI GCGATG 1 cut(s) 346
BtsCI GGATG 2 cut(s) 94, 502
BtsI GCAGTG 1 cut(s) 433
BtsIMutI CAGTG 1 cut(s) 433
Cac8I GCNNGC 3 cut(s) 143, 300, 394
Cfr10I RCCGGY 1 cut(s) 234
Cfr13I GGNCC 1 cut(s) 324
CseI GACGC 1 cut(s) 542
Csp6I GTAC 1 cut(s) 533
CviAII CATG 1 cut(s) 142
CviQI GTAC 1 cut(s) 533
DdeI CTNAG 3 cut(s) 102, 224, 248
DpnI GATC 4 cut(s) 41, 162, 222, 284
DpnII GATC 4 cut(s) 39, 160, 220, 282
Eam1104I CTCTTC 1 cut(s) 198
EarI CTCTTC 1 cut(s) 198
Eco147I AGGCCT 1 cut(s) 274
Eco31I GGTCTC 1 cut(s) 220
Eco47I GGWCC 1 cut(s) 324
Eco88I CYCGRG 1 cut(s) 305
EcoO109I RGGNCCY 1 cut(s) 324
EcoRII CCWGG 2 cut(s) 269, 396
FaeI CATG 1 cut(s) 145
FaiI YATR 5 cut(s) 45, 81, 143, 540, 542
FaqI GGGAC 1 cut(s) 310
FatI CATG 1 cut(s) 141
FauI CCCGC 1 cut(s) 359
FauNDI CATATG 1 cut(s) 540
FblI GTMKAC 1 cut(s) 24
Fnu4HI GCNGC 3 cut(s) 257, 260, 372
FokI GGATG 2 cut(s) 101, 509
Fsp4HI GCNGC 3 cut(s) 257, 260, 372
FspBI CTAG 2 cut(s) 111, 393
GluI GCNGC 3 cut(s) 257, 260, 372
GsaI CCCAGC 2 cut(s) 331, 391
GsuI CTGGAG 1 cut(s) 253
HaeIII GGCC 1 cut(s) 274
HapII CCGG 2 cut(s) 235, 379
HgaI GACGC 1 cut(s) 542
Hin1I GRCGYC 1 cut(s) 553
Hin1II CATG 1 cut(s) 145
HinfI GANTC 3 cut(s) 8, 76, 314
HpaII CCGG 2 cut(s) 235, 379
Hpy166II GTNNAC 3 cut(s) 25, 510, 535
Hpy188I TCNGA 2 cut(s) 220, 313
Hpy188III TCNNGA 2 cut(s) 557, 566
Hpy8I GTNNAC 3 cut(s) 25, 510, 535
HpyAV CCTTC 4 cut(s) 86, 177, 377, 385
HpyCH4III ACNGT 2 cut(s) 505, 514
HpyCH4V TGCA 3 cut(s) 122, 141, 145
HpyF10VI GCNNNNNNNGC 2 cut(s) 107, 393
HpyF3I CTNAG 3 cut(s) 102, 224, 248
Hsp92I GRCGYC 1 cut(s) 553
Hsp92II CATG 1 cut(s) 145
Kzo9I GATC 4 cut(s) 39, 160, 220, 282
LmnI GCTCC 1 cut(s) 342
Lsp1109I GCAGC 3 cut(s) 268, 271, 358
LweI GCATC 2 cut(s) 88, 550
MaeI CTAG 2 cut(s) 111, 393
MaeIII GTNAC 3 cut(s) 406, 499, 524
MalI GATC 4 cut(s) 41, 162, 222, 284
MboI GATC 4 cut(s) 39, 160, 220, 282
MboII GAAGA 1 cut(s) 215
MfeI CAATTG 1 cut(s) 123
MflI RGATCY 2 cut(s) 39, 220
MluCI AATT 2 cut(s) 123, 466
MlyI GAGTC 2 cut(s) 2, 308
MmeI TCCRAC 2 cut(s) 174, 396
MnlI CCTC 7 cut(s) 79, 199, 285, 315, 333, 344, 451
MslI CAYNNNNRTG 1 cut(s) 543
MspA1I CMGCKG 1 cut(s) 262
MspI CCGG 2 cut(s) 235, 379
MspR9I CCNGG 3 cut(s) 271, 380, 398
MunI CAATTG 1 cut(s) 123
MvaI CCWGG 2 cut(s) 271, 398
MwoI GCNNNNNNNGC 2 cut(s) 107, 393
NciI CCSGG 1 cut(s) 380
NdeI CATATG 1 cut(s) 540
NdeII GATC 4 cut(s) 39, 160, 220, 282
NheI GCTAGC 1 cut(s) 392
NlaIII CATG 1 cut(s) 145
NlaIV GGNNCC 3 cut(s) 152, 326, 577
NmuCI GTSAC 1 cut(s) 406
NspI RCATGY 1 cut(s) 145
PaeI GCATGC 1 cut(s) 145
PceI AGGCCT 1 cut(s) 274
PfeI GAWTC 1 cut(s) 76
PfoI TCCNGGA 1 cut(s) 378
PkrI GCNGC 3 cut(s) 258, 261, 373
PleI GAGTC 2 cut(s) 2, 308
PpsI GAGTC 2 cut(s) 2, 308
PpuMI RGGWCCY 1 cut(s) 324
Psp5II RGGWCCY 1 cut(s) 324
Psp6I CCWGG 2 cut(s) 269, 396
PspFI CCCAGC 2 cut(s) 327, 387
PspGI CCWGG 2 cut(s) 269, 396
PspN4I GGNNCC 3 cut(s) 152, 326, 577
PspPI GGNCC 1 cut(s) 324
PspPPI RGGWCCY 1 cut(s) 324
PsuI RGATCY 2 cut(s) 39, 220
RsaI GTAC 1 cut(s) 534
RsaNI GTAC 1 cut(s) 533
RseI CAYNNNNRTG 1 cut(s) 543
SatI GCNGC 3 cut(s) 257, 260, 372
Sau3AI GATC 4 cut(s) 39, 160, 220, 282
Sau96I GGNCC 1 cut(s) 324
SchI GAGTC 2 cut(s) 2, 308
ScrFI CCNGG 3 cut(s) 271, 380, 398
SetI ASST 4 cut(s) 72, 210, 326, 462
SfaNI GCATC 2 cut(s) 88, 550
SinI GGWCC 1 cut(s) 324
SmiMI CAYNNNNRTG 1 cut(s) 543
SmlI CTYRAG 2 cut(s) 316, 564
SmoI CTYRAG 2 cut(s) 316, 564
SphI GCATGC 1 cut(s) 145
Sse9I AATT 2 cut(s) 123, 466
SseBI AGGCCT 1 cut(s) 274
SsiI CCGC 3 cut(s) 262, 366, 402
SspMI CTAG 2 cut(s) 111, 393
StuI AGGCCT 1 cut(s) 274
StyD4I CCNGG 3 cut(s) 269, 378, 396
TaaI ACNGT 2 cut(s) 505, 514
TaqI TCGA 1 cut(s) 170
TasI AATT 2 cut(s) 123, 466
TatI WGTACW 1 cut(s) 532
TfiI GAWTC 1 cut(s) 76
TscAI CASTG 1 cut(s) 433
TseFI GTSAC 1 cut(s) 406
TseI GCWGC 3 cut(s) 256, 259, 371
Tsp45I GTSAC 1 cut(s) 406
TspDTI ATGAA 5 cut(s) 68, 105, 188, 374, 508
TspGWI ACGGA 1 cut(s) 88
TspRI CASTG 1 cut(s) 433
VpaK11BI GGWCC 1 cut(s) 324
XceI RCATGY 1 cut(s) 145
XmiI GTMKAC 1 cut(s) 24
XspI CTAG 2 cut(s) 111, 393
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.