RLG00000034493

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_laevigata
Chr7
OG0000107
Physical Location & Seq
Reverse (-)
43739236 .. 43741223
1988 bp
Loading structure...
UTR
Exon/CDS
Intron
RLM00000034493

Sequence Viewer

Length: 1719 bp
ATGAGTTTGTTGTTCTGGTTGCTCCTGATATTTGTAGAAGTAGATGTTGTGCATGGTGGAGGAGTAGGTCTTGAAGATTGCACAGAAACAAGATGTGGCAGCTATGGCCCAGCTATCCGGTTCCCATTTCGACTTAAAGGTAGGCAACCGTTCCATTGTGGTTACCAGGGCTTTGATCTTTCATGCACCAACGACAATCGGACACTGCTTGAGATGCCATCATCATCTAAGCTCTTTGTTACAGAGATTGATTACACATCAAAGACAATTGAAGCAGAACCTGCACTTGATTGCTTGGACAAAGACATTTTCTACCACGGTTCTTCTACCTTCAAATATGTCGGCAATACAAGCTTGTTCAGTTGCCCACCATCAACTGAGAGAGATCAATATAGTGCAGACAATTCTCTTTGTCTGGCAAGATTGAGCCCTTGCCATGGTAATTCAGGCAACCATATTTATGCTTTCGTGGCAGGTTGTTCTATTGATGACACACCCCTAGTGTCATGTACCAAGGTGCATGACTACAAATTTGCTCTTGCATACACACTTGATTTCAGCTCACTCTGGTCTCTCCACTGGTCCATACCATCTTGTCAACATTGTGAAGAGAAAGGCAAGCTATGTCGGCTGAAGAATGAATTCACAAATCAGACAGATCCTCAAACTCAATGCTTGGATGTACCCAAAGCCAAAGCGACGGGAACAATAATCTACTATGTCTATAGCTCTGTCAAAAGAGAAGAAGAAAATCAGCTGAGAATTAAAAGATTTTTGGATGACTACAGAGCTCTTAAGCCAAGCAGATACTCTTATGCAGATATTAAGAGGATAACAGAGCAGTTCAAGGAGAAGCTGGGTCAAGGGGCCTATGGAACTGTGTTTAAAGGTAAACTTTCTTCTGAATTTCTTGTTGCTGTGAAAATCCTCAACAATTCAAATGAGAAAGGGGAAGATTTTATTAATGAAGTGGGCACAATGGGTCAAATCCACCATGTCAATGTAGTACGCTTGGTTGGTTACTGTGCTGATGGCTTTATACGAGCTCTTGTTTATAAATTCTTACCAAACGGTCCACTCCAGAATTTCTTATCATCAGCAGATAATGAGAGTTCGTTCCTTGGTTGGGATAAGTTGCAAGATATTGCTTTAGGTATAGCAAAAGGAATTGAATATCTTCACCAAGGTTGTGAACAACAAATCCTCCACTTTGACATCAAACCCCATAATGTGTTGCTAGACCATGATTTCACTCCAAAAGTTTCCGATTTTGGTTTAGCCAAGTTGTGCTCTAAGGAACAAAGCGCGGTATCCATGACTGCAGCAAGGGGAACCATGGGCTACATTGCACCAGAAGTCTTCTCAAGGAACTTTGGTAACGTGTCATATAAGGCAGATGTCTATAGTTTTGGAACATTGCTTCTGGAAATGGTTGGGGGCAGAAAGAATTTTAAAGTCATGGAAGACTCCACCAGCCAAGTCTACTTCCCAGAATGGATCTATAACCTCTTAGAACAAGGGAACGACCTTCGCATCCATATTGGGGACGAAGGAAATGTTGAAATTGCTAGGAAACTTGCAGTTGTGGGTCTATGGTGCATCCAATGGCATCCAATAGACCGTCCTTCCATGAAAACTGTGGTTCAAATGTTGGAAAGGGAAGGTGACAATCTGACCCTACCTCCTAATCCTTTTGCCTCTACTTCATCTTCGAGTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

573

Amino Acids

64.25

Weight (kDa)

5.92

Isoelectric Point (pI)

36.03

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 27 - 91 2.2e-18 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 281 - 551 1.8e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 282 - 549 2.2e-44 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
Loading...
Style Settings
Image
Tree File
Tip: Beautify your tree with professional tools

Download the Full Tree (.nwk) file, then upload it to any of the following tools to customize colors, fonts, annotations, clades, and branch support.

Publication-ready
iTOL Interactive Tree Of Life · Most popular EvolView Flexible annotations MEGA Desktop phylogenetics suite FigTree Desktop tree editor

Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1056
Acc36I ACCTGC 2 cut(s) 289, 464
AccI GTMKAC 1 cut(s) 1482
AccII CGCG 1 cut(s) 1307
AciI CCGC 1 cut(s) 1307
AclWI GGATC 2 cut(s) 653, 1505
AcsI RAATTY 6 cut(s) 530, 641, 905, 1058, 1084, 1447
AcuI CTGAAG 1 cut(s) 653
AfaI GTAC 3 cut(s) 511, 684, 1008
AfiI CCNNNNNNNGG 3 cut(s) 437, 1126, 1543
AflII CTTAAG 1 cut(s) 794
AflIII ACRYGT 1 cut(s) 1380
AgsI TTSAA 8 cut(s) 74, 272, 334, 847, 939, 1172, 1562, 1646
AjnI CCWGG 1 cut(s) 165
AloI GAACNNNNNNTCC 2 cut(s) 1185, 1217
Alw21I GWGCWC 3 cut(s) 793, 1048, 1292
Alw26I GTCTC 1 cut(s) 576
AlwI GGATC 2 cut(s) 653, 1505
AlwNI CAGNNNCTG 1 cut(s) 281
AoxI GGCC 2 cut(s) 106, 867
ApeKI GCWGC 2 cut(s) 99, 1322
ApoI RAATTY 6 cut(s) 530, 641, 905, 1058, 1084, 1447
ArsI GACNNNNNNTTYG 2 cut(s) 515, 547
AseI ATTAAT 1 cut(s) 963
Asp700I GAANNNNTTC 2 cut(s) 641, 1176
AspLEI GCGC 1 cut(s) 1307
AspS9I GGNCC 4 cut(s) 107, 582, 867, 1073
AsuHPI GGTGA 2 cut(s) 1172, 1676
AvaII GGWCC 2 cut(s) 582, 1073
BaeGI GKGCMC 1 cut(s) 977
BanII GRGCYC 3 cut(s) 431, 793, 1048
BarI GAAGNNNNNNTAC 2 cut(s) 883, 915
BbsI GAAGAC 2 cut(s) 1351, 1470
Bbv12I GWGCWC 3 cut(s) 793, 1048, 1292
BbvI GCAGC 2 cut(s) 111, 1334
BccI CCATC 4 cut(s) 226, 379, 598, 1025
BciT130I CCWGG 1 cut(s) 167
BciVI GTATCC 1 cut(s) 1321
BcoDI GTCTC 1 cut(s) 576
BfaI CTAG 3 cut(s) 500, 1238, 1569
BfmI CTRYAG 4 cut(s) 724, 784, 1320, 1402
BfrI CTTAAG 1 cut(s) 794
BfuAI ACCTGC 2 cut(s) 289, 464
BfuI GTATCC 1 cut(s) 1321
BisI GCNGC 2 cut(s) 100, 1323
BlsI GCNGC 2 cut(s) 101, 1324
Bme1390I CCNGG 1 cut(s) 167
Bme18I GGWCC 2 cut(s) 582, 1073
BmgT120I GGNCC 4 cut(s) 107, 582, 867, 1073
BmiI GGNNCC 3 cut(s) 122, 868, 1333
BmrFI CCNGG 1 cut(s) 167
BmsI GCATC 4 cut(s) 204, 1542, 1608, 1618
BpiI GAAGAC 2 cut(s) 1351, 1470
BpmI CTGGAG 1 cut(s) 1064
BpuEI CTTGAG 2 cut(s) 230, 1348
BsaI GGTCTC 1 cut(s) 576
BsaJI CCNNGG 7 cut(s) 166, 316, 436, 513, 1120, 1183, 1335
BsaWI WCCGGW 1 cut(s) 117
BsaXI ACNNNNNCTCC 4 cut(s) 1188, 1218, 1666, 1696
Bsc4I CCNNNNNNNGG 3 cut(s) 437, 1126, 1543
Bse1I ACTGG 1 cut(s) 584
Bse3DI GCAATG 2 cut(s) 1344, 1415
BseBI CCWGG 1 cut(s) 167
BseDI CCNNGG 7 cut(s) 166, 316, 436, 513, 1120, 1183, 1335
BseGI GGATG 5 cut(s) 685, 784, 1533, 1599, 1609
BseLI CCNNNNNNNGG 3 cut(s) 437, 1126, 1543
BseMI GCAATG 2 cut(s) 1344, 1415
BseMII CTCAG 2 cut(s) 369, 749
BseNI ACTGG 1 cut(s) 584
BseRI GAGGAG 1 cut(s) 75
BseSI GKGCMC 1 cut(s) 977
BseXI GCAGC 2 cut(s) 111, 1334
BseYI CCCAGC 2 cut(s) 109, 856
BsgI GTGCAG 2 cut(s) 267, 417
Bsh1236I CGCG 1 cut(s) 1307
BshFI GGCC 2 cut(s) 108, 869
BsiHKAI GWGCWC 3 cut(s) 793, 1048, 1292
BsiSI CCGG 1 cut(s) 118
BslFI GGGAC 1 cut(s) 1559
BslI CCNNNNNNNGG 3 cut(s) 437, 1126, 1543
BsmAI GTCTC 1 cut(s) 576
BsmFI GGGAC 1 cut(s) 1559
BsnI GGCC 2 cut(s) 108, 869
Bso31I GGTCTC 1 cut(s) 576
Bsp1286I GDGCHC 5 cut(s) 431, 793, 977, 1048, 1292
Bsp143I GATC 4 cut(s) 175, 385, 658, 1497
Bsp19I CCATGG 2 cut(s) 436, 1335
BspACI CCGC 1 cut(s) 1307
BspANI GGCC 2 cut(s) 108, 869
BspCNI CTCAG 2 cut(s) 370, 750
BspFNI CGCG 1 cut(s) 1307
BspLI GGNNCC 3 cut(s) 122, 868, 1333
BspMAI CTGCAG 1 cut(s) 1324
BspMI ACCTGC 2 cut(s) 289, 464
BspPI GGATC 2 cut(s) 653, 1505
BspTI CTTAAG 1 cut(s) 794
BspTNI GGTCTC 1 cut(s) 576
BsrDI GCAATG 2 cut(s) 1344, 1415
BsrI ACTGG 1 cut(s) 584
BssECI CCNNGG 7 cut(s) 166, 316, 436, 513, 1120, 1183, 1335
BssMI GATC 4 cut(s) 175, 385, 658, 1497
BssT1I CCWWGG 5 cut(s) 436, 513, 1120, 1183, 1335
Bst2UI CCWGG 1 cut(s) 167
Bst4CI ACNGT 7 cut(s) 150, 320, 880, 1025, 1073, 1622, 1639
Bst6I CTCTTC 1 cut(s) 603
BstAFI CTTAAG 1 cut(s) 794
BstAPI GCANNNNNTGC 1 cut(s) 281
BstC8I GCNNGC 1 cut(s) 620
BstDEI CTNAG 5 cut(s) 228, 378, 758, 1293, 1510
BstDSI CCRYGG 3 cut(s) 316, 436, 1335
BstEII GGTNACC 1 cut(s) 161
BstF5I GGATG 5 cut(s) 685, 784, 1533, 1599, 1609
BstFNI CGCG 1 cut(s) 1307
BstHHI GCGC 1 cut(s) 1307
BstKTI GATC 4 cut(s) 178, 388, 661, 1500
BstMAI GTCTC 1 cut(s) 576
BstMBI GATC 4 cut(s) 175, 385, 658, 1497
BstMWI GCNNNNNNNGC 6 cut(s) 105, 214, 281, 351, 470, 628
BstNI CCWGG 1 cut(s) 167
BstPI GGTNACC 1 cut(s) 161
BstSCI CCNGG 1 cut(s) 165
BstSFI CTRYAG 4 cut(s) 724, 784, 1320, 1402
BstSLI GKGCMC 1 cut(s) 977
BstUI CGCG 1 cut(s) 1307
BstV1I GCAGC 2 cut(s) 111, 1334
BstV2I GAAGAC 2 cut(s) 1351, 1470
BstX2I RGATCY 2 cut(s) 658, 1497
BstYI RGATCY 2 cut(s) 658, 1497
BsuI GTATCC 1 cut(s) 1321
BsuRI GGCC 2 cut(s) 108, 869
BtgI CCRYGG 3 cut(s) 316, 436, 1335
BtsCI GGATG 5 cut(s) 685, 784, 1533, 1599, 1609
BtsI GCAGTG 1 cut(s) 203
BtsIMutI CAGTG 2 cut(s) 203, 577
BveI ACCTGC 2 cut(s) 289, 464
Cac8I GCNNGC 1 cut(s) 620
CaiI CAGNNNCTG 1 cut(s) 281
CfoI GCGC 1 cut(s) 1307
Cfr13I GGNCC 4 cut(s) 107, 582, 867, 1073
Csp6I GTAC 3 cut(s) 510, 683, 1007
CviQI GTAC 3 cut(s) 510, 683, 1007
DdeI CTNAG 5 cut(s) 228, 378, 758, 1293, 1510
DpnI GATC 4 cut(s) 177, 387, 660, 1499
DpnII GATC 4 cut(s) 175, 385, 658, 1497
DraI TTTAAA 2 cut(s) 886, 1453
Eam1104I CTCTTC 1 cut(s) 603
EarI CTCTTC 1 cut(s) 603
Ecl136II GAGCTC 2 cut(s) 791, 1046
Eco130I CCWWGG 5 cut(s) 436, 513, 1120, 1183, 1335
Eco24I GRGCYC 3 cut(s) 431, 793, 1048
Eco31I GGTCTC 1 cut(s) 576
Eco47I GGWCC 2 cut(s) 582, 1073
Eco53kI GAGCTC 2 cut(s) 791, 1046
Eco57I CTGAAG 1 cut(s) 653
Eco91I GGTNACC 1 cut(s) 161
EcoICRI GAGCTC 2 cut(s) 791, 1046
EcoO109I RGGNCCY 1 cut(s) 867
EcoO65I GGTNACC 1 cut(s) 161
EcoRI GAATTC 1 cut(s) 641
EcoRII CCWGG 1 cut(s) 165
EcoT14I CCWWGG 5 cut(s) 436, 513, 1120, 1183, 1335
EcoT38I GRGCYC 3 cut(s) 431, 793, 1048
ErhI CCWWGG 5 cut(s) 436, 513, 1120, 1183, 1335
FalI AAGNNNNNCTT 2 cut(s) 879, 911
FaqI GGGAC 1 cut(s) 1559
FblI GTMKAC 1 cut(s) 1482
Fnu4HI GCNGC 2 cut(s) 100, 1323
FokI GGATG 5 cut(s) 692, 791, 1520, 1586, 1596
FriOI GRGCYC 3 cut(s) 431, 793, 1048
Fsp4HI GCNGC 2 cut(s) 100, 1323
FspBI CTAG 3 cut(s) 500, 1238, 1569
GlaI GCGC 1 cut(s) 1306
GluI GCNGC 2 cut(s) 100, 1323
GsaI CCCAGC 2 cut(s) 113, 860
GsuI CTGGAG 1 cut(s) 1064
HaeIII GGCC 2 cut(s) 108, 869
HapII CCGG 1 cut(s) 118
HhaI GCGC 1 cut(s) 1307
Hin6I GCGC 1 cut(s) 1305
HinP1I GCGC 1 cut(s) 1305
HincII GTYRAC 1 cut(s) 599
HindII GTYRAC 1 cut(s) 599
HindIII AAGCTT 1 cut(s) 352
HinfI GANTC 1 cut(s) 1466
HpaII CCGG 1 cut(s) 118
HphI GGTGA 2 cut(s) 1172, 1676
Hpy166II GTNNAC 5 cut(s) 599, 893, 1076, 1193, 1483
Hpy188I TCNGA 5 cut(s) 201, 654, 904, 1267, 1674
Hpy188III TCNNGA 4 cut(s) 25, 71, 1081, 1424
Hpy8I GTNNAC 5 cut(s) 599, 893, 1076, 1193, 1483
Hpy99I CGWCG 1 cut(s) 703
HpyAV CCTTC 5 cut(s) 340, 1538, 1544, 1635, 1655
HpyCH4III ACNGT 7 cut(s) 150, 320, 880, 1025, 1073, 1622, 1639
HpyCH4IV ACGT 1 cut(s) 1380
HpyF10VI GCNNNNNNNGC 6 cut(s) 105, 214, 281, 351, 470, 628
HpyF3I CTNAG 5 cut(s) 228, 378, 758, 1293, 1510
HpySE526I ACGT 1 cut(s) 1380
HspAI GCGC 1 cut(s) 1305
Kzo9I GATC 4 cut(s) 175, 385, 658, 1497
LmnI GCTCC 1 cut(s) 27
Lsp1109I GCAGC 2 cut(s) 111, 1334
LweI GCATC 4 cut(s) 204, 1542, 1608, 1618
MaeI CTAG 3 cut(s) 500, 1238, 1569
MaeII ACGT 1 cut(s) 1380
MaeIII GTNAC 5 cut(s) 161, 238, 1019, 1376, 1664
MalI GATC 4 cut(s) 177, 387, 660, 1499
MboI GATC 4 cut(s) 175, 385, 658, 1497
MfeI CAATTG 1 cut(s) 267
MflI RGATCY 2 cut(s) 658, 1497
MhlI GDGCHC 5 cut(s) 431, 793, 977, 1048, 1292
MlyI GAGTC 1 cut(s) 1460
MmeI TCCRAC 1 cut(s) 1632
MnlI CCTC 8 cut(s) 53, 672, 822, 938, 1214, 1517, 1692, 1708
MroXI GAANNNNTTC 2 cut(s) 641, 1176
MseI TTAA 7 cut(s) 135, 765, 795, 825, 885, 963, 1452
MslI CAYNNNNRTG 2 cut(s) 459, 999
MspA1I CMGCKG 1 cut(s) 757
MspCI CTTAAG 1 cut(s) 794
MspI CCGG 1 cut(s) 118
MspR9I CCNGG 1 cut(s) 167
MunI CAATTG 1 cut(s) 267
MvaI CCWGG 1 cut(s) 167
MvnI CGCG 1 cut(s) 1307
MwoI GCNNNNNNNGC 6 cut(s) 105, 214, 281, 351, 470, 628
NcoI CCATGG 2 cut(s) 436, 1335
NdeII GATC 4 cut(s) 175, 385, 658, 1497
NlaIV GGNNCC 3 cut(s) 122, 868, 1333
NmuCI GTSAC 1 cut(s) 1664
PdmI GAANNNNTTC 2 cut(s) 641, 1176
PkrI GCNGC 2 cut(s) 101, 1324
PleI GAGTC 1 cut(s) 1460
PpsI GAGTC 1 cut(s) 1460
PshBI ATTAAT 1 cut(s) 963
PsiI TTATAA 1 cut(s) 1056
Psp124BI GAGCTC 2 cut(s) 793, 1048
Psp6I CCWGG 1 cut(s) 165
PspEI GGTNACC 1 cut(s) 161
PspFI CCCAGC 2 cut(s) 109, 856
PspGI CCWGG 1 cut(s) 165
PspN4I GGNNCC 3 cut(s) 122, 868, 1333
PspPI GGNCC 4 cut(s) 107, 582, 867, 1073
PstI CTGCAG 1 cut(s) 1324
PstNI CAGNNNCTG 1 cut(s) 281
PsuI RGATCY 2 cut(s) 658, 1497
PvuII CAGCTG 1 cut(s) 757
RsaI GTAC 3 cut(s) 511, 684, 1008
RsaNI GTAC 3 cut(s) 510, 683, 1007
RseI CAYNNNNRTG 2 cut(s) 459, 999
SacI GAGCTC 2 cut(s) 793, 1048
SaqAI TTAA 7 cut(s) 135, 765, 795, 825, 885, 963, 1452
SatI GCNGC 2 cut(s) 100, 1323
Sau3AI GATC 4 cut(s) 175, 385, 658, 1497
Sau96I GGNCC 4 cut(s) 107, 582, 867, 1073
SchI GAGTC 1 cut(s) 1460
ScrFI CCNGG 1 cut(s) 167
SduI GDGCHC 5 cut(s) 431, 793, 977, 1048, 1292
SfaNI GCATC 4 cut(s) 204, 1542, 1608, 1618
SfcI CTRYAG 4 cut(s) 724, 784, 1320, 1402
SinI GGWCC 2 cut(s) 582, 1073
SmiMI CAYNNNNRTG 2 cut(s) 459, 999
SmlI CTYRAG 3 cut(s) 209, 794, 1363
SmoI CTYRAG 3 cut(s) 209, 794, 1363
SsiI CCGC 1 cut(s) 1307
SspMI CTAG 3 cut(s) 500, 1238, 1569
SstI GAGCTC 2 cut(s) 793, 1048
StyD4I CCNGG 1 cut(s) 165
StyI CCWWGG 5 cut(s) 436, 513, 1120, 1183, 1335
TaaI ACNGT 7 cut(s) 150, 320, 880, 1025, 1073, 1622, 1639
TaiI ACGT 1 cut(s) 1383
TaqI TCGA 2 cut(s) 130, 1712
Tru1I TTAA 7 cut(s) 135, 765, 795, 825, 885, 963, 1452
Tru9I TTAA 7 cut(s) 135, 765, 795, 825, 885, 963, 1452
TscAI CASTG 2 cut(s) 210, 584
TseFI GTSAC 1 cut(s) 1664
TseI GCWGC 2 cut(s) 99, 1322
Tsp45I GTSAC 1 cut(s) 1664
TspDTI ATGAA 5 cut(s) 171, 654, 981, 1646, 1695
TspRI CASTG 2 cut(s) 210, 584
Vha464I CTTAAG 1 cut(s) 794
VpaK11BI GGWCC 2 cut(s) 582, 1073
VspI ATTAAT 1 cut(s) 963
XapI RAATTY 6 cut(s) 530, 641, 905, 1058, 1084, 1447
XcmI CCANNNNNNNNNTGG 1 cut(s) 1636
XmiI GTMKAC 1 cut(s) 1482
XmnI GAANNNNTTC 2 cut(s) 641, 1176
XspI CTAG 3 cut(s) 500, 1238, 1569
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.