RchiOBHm_Chr1g0333541

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
rosa_chinensis
1
OG0000107
Physical Location & Seq
Forward (+)
25686622 .. 25688844
2223 bp
Loading structure...
UTR
Exon/CDS
Intron
PRQ56234

Sequence Viewer

Length: 1776 bp
ATGCAGCAAACTCTCATCCTTTTCTTTTGGTTCATCTTCCTGGCTTTCTCATCCAAAGTCCTTTGTGAAAACCTGAACACCTGCAGAGTTTTGATGTGTGGGGAATATGGCCCAGCTATCAGATTCCCTTTTAGCCTCAAAGGTAGCCACCCAGAAAATTGTGGGTATCCTGGGTTTCTTGTATCCTGCAATGAAAAGAATGAAACCATTCTTGAGCTGCCAATCCCAGTCAAATTCACAATCAAAAACATAGACTATAAGAACCAGTATATTCAGCTATATGACCCAGAAAATTGCTTGCTGGTGAAGCTATTGAAAGTCCACAACATGCCAATTTCTCCTTTCAACTACTCAGAATACCAAATGACTAACATTACTTTATTCAATTGTTCTTCAGCTGAATGGCAATCGGTACATAATATGGCCCGAGTCCCCTGCTTGAGTGGCCCTGTCTACCAAATTTCTTCGCTTGAGTATCCTTACATTGACGACTTATCCTTTCCGTCTTGTACGAAGATCTCTTATCATTCCTCAGTTCCATACGAGTGGTATGATCCTCAAGATCTTTCTTTGGACTGGACGGAACCAAATTGTACACGATGTGAAGCATACGGCAACAAATGTGGATGGAAGAGCAATGACACCAAAAGTACCGAAATTGAATGCCTTCATAGGAAAGGAGGTTCACAGAAAAAGTTAGTCGCAACAGGTGCATCCCTGGGTTCATTTGTACTCGTACTACTTGTCGCTGCACTTTATCGTGTCTACAATTCTGACAGGAAAGAAAAAGAGAATCAATTAAAACTTGAAGTATTTTTAGAGGATTACAGAGCACTCAAACCAAGCAGATATTCTTATGCAGATATTAAGAGGATTACAAATCAATTCAAGGAAAAATTAGGCCAAGGAGCCTATGGGACTGTTTTTAAGGGAAAACTTTCTGCTGAATGTTTTGTTGCGGTGAAAGTCCTCAATAGTACTAAGGGGAATGGGGAAGAGTTTGTAAATGAAGTAGGAACAATGGGACATATCCACCATGTCAATGTGGTTCGATTGGTTGGATTCTGTGCGGATGGATTTAGACGAGCTCTTATTTATGACTTCTTACCTAATGGTTCACTACAAGATTTCATTTCATCAGTAGACAATAACAATTCTTTCCCTGGTTGGGGTAAGTTGCAAGATATTTCTCTTGGAATAGCAAAAGGAATTGAATATCTGCACGAAGGATGCAATCGACGGATCCTTCATTTTGATATCAAACCCCATAATGTTTTGCTAGACCACAACTTCAACGCAAAGATTTCTGATTTTGGTTTGGCCAAGTTATGTTCTAAGGATCAAAGTATAGTGTCAATGACTACCGCCAGGGGAACGATGGGGTACATTGCACCTGAATTGTTCTCCAGGAACTTCGGAAATGTGTCCTATAAGTCAGATGTCTATAGCTATGGAATGGTACTGCTTGAGATTGTAGGAGGGACAAAGAACATTGGTTCAACCACAGAGAACACCAATGAAGTTTACTGCCCAGAATGGATCTATAATCTTCTAGAAGAAAAAGACGACCTACCTATCAATGTATGGGAAGAAGGAGATACTAAAATTGCAAAGAGACTTGCGATTGTAGGTCTCTGGTGCATTCAATGGCACCCTGCAGATCGTCCTTCTATGCAAAGGGTGGTTCAAATGTTAGAAGAAGGAGGAAACTTAACCATGCCTCAAAATCCTTTTGCCTCTCAGGGTCCAGCAGGAACAAATACAAGTACACCTTGA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase

Protein Analysis

591

Amino Acids

66.76

Weight (kDa)

6.26

Isoelectric Point (pI)

35.34

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
GUB_WAK_bind PF13947 28 - 95 4.8e-17 Wall-associated receptor kinase galacturonan-binding
PK_Tyr_Ser-Thr PF07714 295 - 565 3.3e-44 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 296 - 563 6.5e-46 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AarI CACCTGC 1 cut(s) 89
Acc36I ACCTGC 1 cut(s) 89
AccB1I GGYRCC 1 cut(s) 1650
AccI GTMKAC 3 cut(s) 453, 765, 1143
AciI CCGC 3 cut(s) 959, 1070, 1365
AclWI GGATC 5 cut(s) 548, 1237, 1250, 1347, 1547
AcoI YGGCCR 1 cut(s) 1320
AcsI RAATTY 2 cut(s) 233, 459
AcuI CTGAAG 1 cut(s) 378
AdeI CACNNNGTG 1 cut(s) 602
AfiI CCNNNNNNNGG 2 cut(s) 1168, 1169
AjnI CCWGG 6 cut(s) 39, 169, 717, 1162, 1367, 1406
AjuI GAANNNNNNNTTGG 2 cut(s) 835, 867
AloI GAACNNNNNNTCC 2 cut(s) 667, 699
AluBI AGCT 7 cut(s) 116, 217, 277, 310, 398, 1088, 1449
AluI AGCT 7 cut(s) 116, 217, 277, 310, 398, 1088, 1449
Alw21I GWGCWC 2 cut(s) 835, 1090
Alw26I GTCTC 2 cut(s) 1609, 1637
AlwI GGATC 5 cut(s) 548, 1237, 1250, 1347, 1547
Ama87I CYCGRG 1 cut(s) 426
AoxI GGCC 5 cut(s) 109, 423, 445, 901, 1320
ApeKI GCWGC 3 cut(s) 4, 217, 749
ApoI RAATTY 2 cut(s) 233, 459
Asp700I GAANNNNTTC 3 cut(s) 207, 666, 937
AspS9I GGNCC 4 cut(s) 110, 424, 446, 1745
AsuHPI GGTGA 2 cut(s) 316, 973
AvaI CYCGRG 1 cut(s) 426
AvaII GGWCC 1 cut(s) 1745
BalI TGGCCA 1 cut(s) 1322
BamHI GGATCC 1 cut(s) 1242
BanI GGYRCC 1 cut(s) 1650
BanII GRGCYC 1 cut(s) 1090
Bbv12I GWGCWC 2 cut(s) 835, 1090
BbvI GCAGC 3 cut(s) 16, 204, 736
BccI CCATC 3 cut(s) 621, 1067, 1372
BceAI ACGGC 1 cut(s) 628
BcgI CGANNNNNNTGC 2 cut(s) 417, 451
BciT130I CCWGG 6 cut(s) 41, 171, 719, 1164, 1369, 1408
BciVI GTATCC 3 cut(s) 177, 193, 486
BcoDI GTCTC 2 cut(s) 1609, 1637
BfaI CTAG 2 cut(s) 1280, 1553
BfmI CTRYAG 3 cut(s) 82, 1444, 1656
BfuAI ACCTGC 1 cut(s) 89
BfuI GTATCC 3 cut(s) 177, 193, 486
BglII AGATCT 2 cut(s) 516, 562
BisI GCNGC 3 cut(s) 5, 218, 750
BlsI GCNGC 3 cut(s) 6, 219, 751
BmcAI AGTACT 1 cut(s) 979
Bme1390I CCNGG 6 cut(s) 41, 171, 719, 1164, 1369, 1408
Bme18I GGWCC 1 cut(s) 1745
BmeT110I CYCGRG 1 cut(s) 426
BmgT120I GGNCC 4 cut(s) 110, 424, 446, 1745
BmiI GGNNCC 5 cut(s) 585, 910, 1244, 1652, 1746
BmrFI CCNGG 6 cut(s) 41, 171, 719, 1164, 1369, 1408
BmrI ACTGGG 1 cut(s) 221
BmsI GCATC 2 cut(s) 722, 1220
BmuI ACTGGG 1 cut(s) 221
BpmI CTGGAG 1 cut(s) 1390
BpuEI CTTGAG 5 cut(s) 233, 460, 491, 543, 1487
BsaI GGTCTC 1 cut(s) 1637
BsaJI CCNNGG 6 cut(s) 170, 717, 718, 904, 1162, 1368
Bsc4I CCNNNNNNNGG 2 cut(s) 1168, 1169
Bse1I ACTGG 3 cut(s) 227, 265, 581
Bse3DI GCAATG 3 cut(s) 196, 643, 1386
BseBI CCWGG 6 cut(s) 41, 171, 719, 1164, 1369, 1408
BseDI CCNNGG 6 cut(s) 170, 717, 718, 904, 1162, 1368
BseGI GGATG 6 cut(s) 15, 50, 632, 713, 1078, 1235
BseLI CCNNNNNNNGG 2 cut(s) 1168, 1169
BseMI GCAATG 3 cut(s) 196, 643, 1386
BseMII CTCAG 3 cut(s) 366, 546, 1754
BseNI ACTGG 3 cut(s) 227, 265, 581
BseXI GCAGC 3 cut(s) 16, 204, 736
BseYI CCCAGC 1 cut(s) 112
BsgI GTGCAG 2 cut(s) 735, 1205
BshFI GGCC 5 cut(s) 111, 425, 447, 903, 1322
BshNI GGYRCC 1 cut(s) 1650
BsiHKAI GWGCWC 2 cut(s) 835, 1090
BsiHKCI CYCGRG 1 cut(s) 426
BslFI GGGAC 4 cut(s) 416, 931, 1038, 1495
BslI CCNNNNNNNGG 2 cut(s) 1168, 1169
BsmAI GTCTC 2 cut(s) 1609, 1637
BsmFI GGGAC 4 cut(s) 416, 931, 1038, 1495
BsmI GAATGC 2 cut(s) 668, 1641
BsnI GGCC 5 cut(s) 111, 425, 447, 903, 1322
Bso31I GGTCTC 1 cut(s) 1637
BsoBI CYCGRG 1 cut(s) 426
Bsp1286I GDGCHC 2 cut(s) 835, 1090
Bsp1407I TGTACA 1 cut(s) 593
Bsp143I GATC 7 cut(s) 516, 553, 562, 1242, 1339, 1539, 1660
BspACI CCGC 3 cut(s) 959, 1070, 1365
BspANI GGCC 5 cut(s) 111, 425, 447, 903, 1322
BspCNI CTCAG 3 cut(s) 365, 545, 1753
BspLI GGNNCC 5 cut(s) 585, 910, 1244, 1652, 1746
BspMAI CTGCAG 2 cut(s) 86, 1660
BspMI ACCTGC 1 cut(s) 89
BspPI GGATC 5 cut(s) 548, 1237, 1250, 1347, 1547
BspQI GCTCTTC 1 cut(s) 626
BspT107I GGYRCC 1 cut(s) 1650
BspTNI GGTCTC 1 cut(s) 1637
BsrDI GCAATG 3 cut(s) 196, 643, 1386
BsrGI TGTACA 1 cut(s) 593
BsrI ACTGG 3 cut(s) 227, 265, 581
BssECI CCNNGG 6 cut(s) 170, 717, 718, 904, 1162, 1368
BssMI GATC 7 cut(s) 516, 553, 562, 1242, 1339, 1539, 1660
BssT1I CCWWGG 1 cut(s) 904
Bst2UI CCWGG 6 cut(s) 41, 171, 719, 1164, 1369, 1408
Bst4CI ACNGT 1 cut(s) 922
Bst6I CTCTTC 2 cut(s) 626, 990
BstAPI GCANNNNNTGC 1 cut(s) 710
BstAUI TGTACA 1 cut(s) 593
BstC8I GCNNGC 1 cut(s) 299
BstDEI CTNAG 5 cut(s) 352, 532, 981, 1335, 1740
BstF5I GGATG 6 cut(s) 15, 50, 632, 713, 1078, 1235
BstKTI GATC 7 cut(s) 519, 556, 565, 1245, 1342, 1542, 1663
BstMAI GTCTC 2 cut(s) 1609, 1637
BstMBI GATC 7 cut(s) 516, 553, 562, 1242, 1339, 1539, 1660
BstMWI GCNNNNNNNGC 3 cut(s) 307, 444, 710
BstNI CCWGG 6 cut(s) 41, 171, 719, 1164, 1369, 1408
BstNSI RCATGY 1 cut(s) 331
BstSCI CCNGG 6 cut(s) 39, 169, 717, 1162, 1367, 1406
BstSFI CTRYAG 3 cut(s) 82, 1444, 1656
BstV1I GCAGC 3 cut(s) 16, 204, 736
BstX2I RGATCY 4 cut(s) 516, 562, 1242, 1539
BstXI CCANNNNNNTGG 1 cut(s) 546
BstYI RGATCY 4 cut(s) 516, 562, 1242, 1539
BsuI GTATCC 3 cut(s) 177, 193, 486
BsuRI GGCC 5 cut(s) 111, 425, 447, 903, 1322
BtsCI GGATG 6 cut(s) 15, 50, 632, 713, 1078, 1235
BveI ACCTGC 1 cut(s) 89
Cac8I GCNNGC 1 cut(s) 299
Cfr13I GGNCC 4 cut(s) 110, 424, 446, 1745
CspCI CAANNNNNGTGG 2 cut(s) 604, 639
CviAII CATG 3 cut(s) 328, 1037, 1717
DdeI CTNAG 5 cut(s) 352, 532, 981, 1335, 1740
DpnI GATC 7 cut(s) 518, 555, 564, 1244, 1341, 1541, 1662
DpnII GATC 7 cut(s) 516, 553, 562, 1242, 1339, 1539, 1660
DraIII CACNNNGTG 1 cut(s) 602
EaeI YGGCCR 1 cut(s) 1320
Eam1104I CTCTTC 2 cut(s) 626, 990
EarI CTCTTC 2 cut(s) 626, 990
Ecl136II GAGCTC 1 cut(s) 1088
Eco130I CCWWGG 1 cut(s) 904
Eco24I GRGCYC 1 cut(s) 1090
Eco31I GGTCTC 1 cut(s) 1637
Eco32I GATATC 1 cut(s) 1258
Eco47I GGWCC 1 cut(s) 1745
Eco53kI GAGCTC 1 cut(s) 1088
Eco57I CTGAAG 1 cut(s) 378
Eco88I CYCGRG 1 cut(s) 426
EcoICRI GAGCTC 1 cut(s) 1088
EcoRII CCWGG 6 cut(s) 39, 169, 717, 1162, 1367, 1406
EcoRV GATATC 1 cut(s) 1258
EcoT14I CCWWGG 1 cut(s) 904
EcoT38I GRGCYC 1 cut(s) 1090
ErhI CCWWGG 1 cut(s) 904
FaeI CATG 3 cut(s) 331, 1040, 1720
FalI AAGNNNNNCTT 1 cut(s) 1756
FaqI GGGAC 4 cut(s) 416, 931, 1038, 1495
FatI CATG 3 cut(s) 327, 1036, 1716
FblI GTMKAC 3 cut(s) 453, 765, 1143
Fnu4HI GCNGC 3 cut(s) 5, 218, 750
FokI GGATG 6 cut(s) 2, 37, 639, 700, 1085, 1242
FriOI GRGCYC 1 cut(s) 1090
Fsp4HI GCNGC 3 cut(s) 5, 218, 750
FspBI CTAG 2 cut(s) 1280, 1553
GluI GCNGC 3 cut(s) 5, 218, 750
GsaI CCCAGC 1 cut(s) 116
GsuI CTGGAG 1 cut(s) 1390
HaeIII GGCC 5 cut(s) 111, 425, 447, 903, 1322
Hin1II CATG 3 cut(s) 331, 1040, 1720
HinfI GANTC 4 cut(s) 123, 429, 793, 1062
HphI GGTGA 2 cut(s) 316, 973
Hpy166II GTNNAC 9 cut(s) 322, 454, 596, 686, 766, 1118, 1144, 1525, 1769
Hpy188I TCNGA 6 cut(s) 122, 355, 775, 1309, 1418, 1438
Hpy188III TCNNGA 3 cut(s) 212, 560, 1553
Hpy8I GTNNAC 9 cut(s) 322, 454, 596, 686, 766, 1118, 1144, 1525, 1769
Hpy99I CGWCG 1 cut(s) 1242
HpyAV CCTTC 6 cut(s) 677, 1220, 1256, 1586, 1677, 1694
HpyCH4III ACNGT 1 cut(s) 922
HpyF10VI GCNNNNNNNGC 3 cut(s) 307, 444, 710
HpyF3I CTNAG 5 cut(s) 352, 532, 981, 1335, 1740
Hsp92II CATG 3 cut(s) 331, 1040, 1720
Kzo9I GATC 7 cut(s) 516, 553, 562, 1242, 1339, 1539, 1660
LguI GCTCTTC 1 cut(s) 626
LmnI GCTCC 1 cut(s) 908
Lsp1109I GCAGC 3 cut(s) 16, 204, 736
LweI GCATC 2 cut(s) 722, 1220
MaeI CTAG 2 cut(s) 1280, 1553
MalI GATC 7 cut(s) 518, 555, 564, 1244, 1341, 1541, 1662
MboI GATC 7 cut(s) 516, 553, 562, 1242, 1339, 1539, 1660
MfeI CAATTG 1 cut(s) 385
MflI RGATCY 4 cut(s) 516, 562, 1242, 1539
MhlI GDGCHC 2 cut(s) 835, 1090
MlsI TGGCCA 1 cut(s) 1322
MluNI TGGCCA 1 cut(s) 1322
MlyI GAGTC 1 cut(s) 438
MmeI TCCRAC 1 cut(s) 1039
Mox20I TGGCCA 1 cut(s) 1322
MroXI GAANNNNTTC 3 cut(s) 207, 666, 937
MscI TGGCCA 1 cut(s) 1322
MseI TTAA 4 cut(s) 800, 867, 927, 1712
MslI CAYNNNNRTG 2 cut(s) 544, 1041
Msp20I TGGCCA 1 cut(s) 1322
MspA1I CMGCKG 1 cut(s) 398
MspR9I CCNGG 6 cut(s) 41, 171, 719, 1164, 1369, 1408
MunI CAATTG 1 cut(s) 385
Mva1269I GAATGC 2 cut(s) 668, 1641
MvaI CCWGG 6 cut(s) 41, 171, 719, 1164, 1369, 1408
MwoI GCNNNNNNNGC 3 cut(s) 307, 444, 710
NdeII GATC 7 cut(s) 516, 553, 562, 1242, 1339, 1539, 1660
NlaIII CATG 3 cut(s) 331, 1040, 1720
NlaIV GGNNCC 5 cut(s) 585, 910, 1244, 1652, 1746
NspI RCATGY 1 cut(s) 331
PaqCI CACCTGC 1 cut(s) 89
PasI CCCWGGG 1 cut(s) 718
PciSI GCTCTTC 1 cut(s) 626
PctI GAATGC 2 cut(s) 668, 1641
PdmI GAANNNNTTC 3 cut(s) 207, 666, 937
PfeI GAWTC 3 cut(s) 123, 793, 1062
PfoI TCCNGGA 1 cut(s) 1406
PkrI GCNGC 3 cut(s) 6, 219, 751
PleI GAGTC 1 cut(s) 437
PpsI GAGTC 1 cut(s) 437
Psp124BI GAGCTC 1 cut(s) 1090
Psp6I CCWGG 6 cut(s) 39, 169, 717, 1162, 1367, 1406
PspFI CCCAGC 1 cut(s) 112
PspGI CCWGG 6 cut(s) 39, 169, 717, 1162, 1367, 1406
PspN4I GGNNCC 5 cut(s) 585, 910, 1244, 1652, 1746
PspPI GGNCC 4 cut(s) 110, 424, 446, 1745
PstI CTGCAG 2 cut(s) 86, 1660
PsuI RGATCY 4 cut(s) 516, 562, 1242, 1539
PvuII CAGCTG 1 cut(s) 398
RseI CAYNNNNRTG 2 cut(s) 544, 1041
SacI GAGCTC 1 cut(s) 1090
SapI GCTCTTC 1 cut(s) 626
SaqAI TTAA 4 cut(s) 800, 867, 927, 1712
SatI GCNGC 3 cut(s) 5, 218, 750
Sau3AI GATC 7 cut(s) 516, 553, 562, 1242, 1339, 1539, 1660
Sau96I GGNCC 4 cut(s) 110, 424, 446, 1745
ScaI AGTACT 1 cut(s) 979
SchI GAGTC 1 cut(s) 438
ScrFI CCNGG 6 cut(s) 41, 171, 719, 1164, 1369, 1408
SduI GDGCHC 2 cut(s) 835, 1090
SfaNI GCATC 2 cut(s) 722, 1220
SfcI CTRYAG 3 cut(s) 82, 1444, 1656
SinI GGWCC 1 cut(s) 1745
SmiMI CAYNNNNRTG 2 cut(s) 544, 1041
SmlI CTYRAG 5 cut(s) 212, 439, 470, 558, 1466
SmoI CTYRAG 5 cut(s) 212, 439, 470, 558, 1466
SsiI CCGC 3 cut(s) 959, 1070, 1365
SspMI CTAG 2 cut(s) 1280, 1553
SstI GAGCTC 1 cut(s) 1090
StyD4I CCNGG 6 cut(s) 39, 169, 717, 1162, 1367, 1406
StyI CCWWGG 1 cut(s) 904
TaaI ACNGT 1 cut(s) 922
TaqI TCGA 2 cut(s) 1051, 1237
TatI WGTACW 4 cut(s) 593, 730, 977, 1766
TfiI GAWTC 3 cut(s) 123, 793, 1062
Tru1I TTAA 4 cut(s) 800, 867, 927, 1712
Tru9I TTAA 4 cut(s) 800, 867, 927, 1712
TseI GCWGC 3 cut(s) 4, 217, 749
TspGWI ACGGA 3 cut(s) 492, 596, 1255
VpaK11BI GGWCC 1 cut(s) 1745
XapI RAATTY 2 cut(s) 233, 459
XbaI TCTAGA 1 cut(s) 1552
XceI RCATGY 1 cut(s) 331
XcmI CCANNNNNNNNNTGG 2 cut(s) 911, 1375
XmiI GTMKAC 3 cut(s) 453, 765, 1143
XmnI GAANNNNTTC 3 cut(s) 207, 666, 937
XspI CTAG 2 cut(s) 1280, 1553
ZrmI AGTACT 1 cut(s) 979
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.