MD02G1252000.v1.1

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
malus_domestica
Chr02
OG0000107
Physical Location & Seq
Forward (+)
30364897 .. 30366901
2005 bp
Loading structure...
UTR
Exon/CDS
Intron
MD02G1252000.v1.1.491

Sequence Viewer

Length: 1818 bp
ATGTGCATTATTTTTATTATTATTATCTCAGAAATGCAGAAATTGATCATCTCTTCCTTCTGCATATTGATACTGGTTTTCTTCAAACTAGTTGAAGCAAGCCAATATGTGTGCGCGAAATCCAACTGTAGCAATGATCAAGGCCCGGCTATCCATTTCCCATTGAACATCAGGCGCACACATCATTGTGGAAATTCTGGGCTTGAATGCAATGGGAGATATGAGCAGCAAATACTAATAAAATTATTTGTCAAAGACACAGATTACAAGCGTCAGGAAATCCAAGTCTATTCCCCAAGTAACTGCCTGCTGCTAAAGCTTGTTGAAATCCCAAACATGCCACCCTCTCCCTTCGTGCCAGTAGTCGATTACATGATTAATTTCATAAACGTTACCTTATTCAGTTGTCCTACTTCTGTTGCAATACGAGATACGTATGGTTGTCAAGTCCCCTGCCTTGGCGACCGTGGCAAGAGAACTTATGCCATTGATTCTGGGGTTTATTTTGAAACTCTCTTCCAGAATCTAGAATCCTGTACAAAAATGTATGATGTTTTATCAGTTCCAATAGCCGATGAATATTATGTTTTTCGTTTCAAATGGTCTATACCAAATTGCAGAAAATGTGGAGAGGGAAAGAAGTGTGAATGGCAGAACAATGAAATTAAATGTCTTCCCTGGAGGAAACCAAGCAACACATGGAAAAAAGTGGTTACAGGTGGAATCCTGTGTGCTTTGCTTCTTGTTCTACTGACGATTGCAGCATATCGGGTATATAGCGCTGATAGAAAGGAGAAAGAGAGTCGATTAAGAATTGAAAGATTCTTGGAGGACTACAAAGCACTCAAACCAAGCAGGTATTCGTACGCAGATATTAAGAGGATTACAAATCAATTCAAGGACAAGTTGGGCGAAGGAGCCTATGGAACTGTCTTCAAAGGAATGCTCTCTTCTGAATTCTTCATTGCTGTCAAAGTCCTCAACAGTTCCAAGGGAGATGGGGAAGAGTTCGTAAATGAAGTGCGAACGATGGGTCATATCCACCACGTAAACGTGGCTCGCTTGGTTGGATTTTGTGCTGATGGATTTGTACGAGCTCTTGTTTACGAGTTCTTCCCCAATGGTTCCCTGCAGGATTTCATTTCATCTGCAGATAGTAAGAATTCATTTCTTGGTTGGGATAAGCTACAAGATATTGCCCTAGGCATAGCCAAAGGAATTGAATATCTTCACCAGGGATGCGATCTACGAATCCTGCATTTCGACATCAAACCCCATAATGTTTTGCTAGACCAAAACTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGCTTGGTGTCCATGACTACAGCAAGGGGGACCATGGGCTACATTGCACCTGAAGTGTTCTCCAGGAATTTCGGAAATGTGTCGTACAAGGCAGATGTTTATAGCTTTGGAATGCTACTGCTTGAGATGGTAGGAGGAAGGAAGAATATTGGTTCAATTACGGATAACACTACAAATGAAATTTACTATCCACAGTGGATTTATAATCTTCTAGAGGAAGGGGATGACCTACGAATCCACATTGGGGAAGAAGGAGATGGTAAAATTCCAAAGAAACTTGCAATTATAGGGCTATGGTGTATCCAGTGGCACCCGTCGGATCGTCCTTCCATGAAAATAGTGGTTCAGATGTTAGAAGGAGGAGGAGAAAGCTTGAGTATGCCGCCTAATCCCTTTGTGCCTACTGGTTCTACAACTAGGAATGCAAGACACCTAGAGCTAGAAGCTATTGCTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

606

Amino Acids

68.51

Weight (kDa)

7.74

Isoelectric Point (pI)

35.83

Instability Index
Protein Domains (Pfam)
Domain Name Pfam ID Position E-value Description
PK_Tyr_Ser-Thr PF07714 298 - 569 9.1e-43 Protein tyrosine and serine/threonine kinase
Pkinase PF00069 299 - 567 2.2e-45 Protein kinase domain
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1557
Acc36I ACCTGC 1 cut(s) 846
AccB1I GGYRCC 1 cut(s) 1662
AccII CGCG 1 cut(s) 116
AciI CCGC 1 cut(s) 1736
AclI AACGTT 1 cut(s) 390
AclWI GGATC 2 cut(s) 1356, 1680
AcoI YGGCCR 1 cut(s) 1329
AcsI RAATTY 7 cut(s) 193, 956, 1162, 1311, 1420, 1533, 1617
AcuI CTGAAG 1 cut(s) 1425
AfaI GTAC 4 cut(s) 538, 866, 1092, 1439
AfeI AGCGCT 1 cut(s) 781
AfiI CCNNNNNNNGG 2 cut(s) 458, 1597
AhlI ACTAGT 1 cut(s) 88
AjnI CCWGG 3 cut(s) 677, 1233, 1415
AjuI GAANNNNNNNTTGG 2 cut(s) 844, 876
AluBI AGCT 8 cut(s) 319, 1097, 1186, 1356, 1458, 1725, 1792, 1799
AluI AGCT 8 cut(s) 319, 1097, 1186, 1356, 1458, 1725, 1792, 1799
Alw21I GWGCWC 1 cut(s) 1099
AlwI GGATC 2 cut(s) 1356, 1680
Aor51HI AGCGCT 1 cut(s) 781
AoxI GGCC 2 cut(s) 142, 1329
ApeKI GCWGC 3 cut(s) 226, 310, 761
ApoI RAATTY 7 cut(s) 193, 956, 1162, 1311, 1420, 1533, 1617
ArsI GACNNNNNNTTYG 2 cut(s) 1018, 1050
AseI ATTAAT 1 cut(s) 378
Asp700I GAANNNNTTC 1 cut(s) 1227
AspA2I CCTAGG 1 cut(s) 1201
AspLEI GCGC 3 cut(s) 116, 177, 782
AspS9I GGNCC 2 cut(s) 143, 1383
AsuC2I CCSGG 1 cut(s) 146
AsuHPI GGTGA 1 cut(s) 1223
AvaII GGWCC 1 cut(s) 1383
AvrII CCTAGG 1 cut(s) 1201
BalI TGGCCA 1 cut(s) 1331
BanI GGYRCC 1 cut(s) 1662
BanII GRGCYC 1 cut(s) 1099
BbsI GAAGAC 2 cut(s) 665, 925
Bbv12I GWGCWC 1 cut(s) 1099
BbvI GCAGC 3 cut(s) 238, 297, 773
BccI CCATC 5 cut(s) 992, 1024, 1076, 1474, 1604
BciT130I CCWGG 3 cut(s) 679, 1235, 1417
BciVI GTATCC 1 cut(s) 1664
BclI TGATCA 2 cut(s) 45, 136
BcnI CCSGG 1 cut(s) 146
BcuI ACTAGT 1 cut(s) 88
BfaI CTAG 8 cut(s) 89, 527, 1202, 1289, 1565, 1770, 1787, 1793
BfmI CTRYAG 4 cut(s) 127, 1130, 1149, 1371
BfoI RGCGCY 1 cut(s) 783
BfuAI ACCTGC 1 cut(s) 846
BfuI GTATCC 1 cut(s) 1664
BisI GCNGC 4 cut(s) 227, 311, 762, 1736
BlnI CCTAGG 1 cut(s) 1201
BlsI GCNGC 4 cut(s) 228, 312, 763, 1737
Bme1390I CCNGG 4 cut(s) 146, 679, 1235, 1417
Bme18I GGWCC 1 cut(s) 1383
BmgT120I GGNCC 2 cut(s) 143, 1383
BmiI GGNNCC 4 cut(s) 919, 1126, 1384, 1664
BmrFI CCNGG 4 cut(s) 146, 679, 1235, 1417
BmsI GCATC 1 cut(s) 1229
BpiI GAAGAC 2 cut(s) 665, 925
BpmI CTGGAG 2 cut(s) 700, 1399
BpuEI CTTGAG 2 cut(s) 1496, 1747
BpuMI CCSGG 1 cut(s) 146
BsaAI YACGTR 2 cut(s) 435, 1048
BsaJI CCNNGG 8 cut(s) 457, 466, 677, 990, 1201, 1234, 1344, 1386
Bsc4I CCNNNNNNNGG 2 cut(s) 458, 1597
Bse1I ACTGG 4 cut(s) 78, 359, 1657, 1762
Bse3DI GCAATG 4 cut(s) 139, 217, 963, 1395
BseBI CCWGG 3 cut(s) 679, 1235, 1417
BseDI CCNNGG 8 cut(s) 457, 466, 677, 990, 1201, 1234, 1344, 1386
BseGI GGATG 2 cut(s) 1244, 1582
BseLI CCNNNNNNNGG 2 cut(s) 458, 1597
BseMI GCAATG 4 cut(s) 139, 217, 963, 1395
BseMII CTCAG 1 cut(s) 42
BseNI ACTGG 4 cut(s) 78, 359, 1657, 1762
BseRI GAGGAG 2 cut(s) 1728, 1731
BseXI GCAGC 3 cut(s) 238, 297, 773
Bsh1236I CGCG 1 cut(s) 116
Bsh1285I CGRYCG 1 cut(s) 466
BshFI GGCC 2 cut(s) 144, 1331
BshNI GGYRCC 1 cut(s) 1662
BsiEI CGRYCG 1 cut(s) 466
BsiHKAI GWGCWC 1 cut(s) 1099
BsiSI CCGG 1 cut(s) 146
BsiWI CGTACG 1 cut(s) 864
BslFI GGGAC 2 cut(s) 434, 1396
BslI CCNNNNNNNGG 2 cut(s) 458, 1597
BsmFI GGGAC 2 cut(s) 434, 1396
BsmI GAATGC 4 cut(s) 212, 948, 1470, 1780
BsnI GGCC 2 cut(s) 144, 1331
Bsp1286I GDGCHC 1 cut(s) 1099
Bsp1407I TGTACA 1 cut(s) 536
Bsp143I GATC 5 cut(s) 45, 136, 1243, 1348, 1672
Bsp19I CCATGG 1 cut(s) 1386
BspACI CCGC 1 cut(s) 1736
BspANI GGCC 2 cut(s) 144, 1331
BspCNI CTCAG 1 cut(s) 41
BspFNI CGCG 1 cut(s) 116
BspLI GGNNCC 4 cut(s) 919, 1126, 1384, 1664
BspMAI CTGCAG 2 cut(s) 1134, 1153
BspMI ACCTGC 1 cut(s) 846
BspPI GGATC 2 cut(s) 1356, 1680
BspT107I GGYRCC 1 cut(s) 1662
BsrDI GCAATG 4 cut(s) 139, 217, 963, 1395
BsrGI TGTACA 1 cut(s) 536
BsrI ACTGG 4 cut(s) 78, 359, 1657, 1762
BssECI CCNNGG 8 cut(s) 457, 466, 677, 990, 1201, 1234, 1344, 1386
BssMI GATC 5 cut(s) 45, 136, 1243, 1348, 1672
BssT1I CCWWGG 5 cut(s) 457, 990, 1201, 1344, 1386
Bst2UI CCWGG 3 cut(s) 679, 1235, 1417
Bst4CI ACNGT 5 cut(s) 128, 467, 931, 986, 1548
Bst6I CTCTTC 4 cut(s) 58, 521, 955, 999
BstAUI TGTACA 1 cut(s) 536
BstBAI YACGTR 2 cut(s) 435, 1048
BstC8I GCNNGC 3 cut(s) 100, 308, 1060
BstDEI CTNAG 1 cut(s) 28
BstDSI CCRYGG 2 cut(s) 466, 1386
BstF5I GGATG 2 cut(s) 1244, 1582
BstFNI CGCG 1 cut(s) 116
BstH2I RGCGCY 1 cut(s) 783
BstHHI GCGC 3 cut(s) 116, 177, 782
BstKTI GATC 5 cut(s) 48, 139, 1246, 1351, 1675
BstMBI GATC 5 cut(s) 45, 136, 1243, 1348, 1672
BstMCI CGRYCG 1 cut(s) 466
BstMWI GCNNNNNNNGC 2 cut(s) 316, 468
BstNI CCWGG 3 cut(s) 679, 1235, 1417
BstNSI RCATGY 1 cut(s) 340
BstSCI CCNGG 4 cut(s) 144, 677, 1233, 1415
BstSFI CTRYAG 4 cut(s) 127, 1130, 1149, 1371
BstSNI TACGTA 1 cut(s) 435
BstUI CGCG 1 cut(s) 116
BstV1I GCAGC 3 cut(s) 238, 297, 773
BstV2I GAAGAC 2 cut(s) 665, 925
BsuI GTATCC 1 cut(s) 1664
BsuRI GGCC 2 cut(s) 144, 1331
BtgI CCRYGG 2 cut(s) 466, 1386
BtsCI GGATG 2 cut(s) 1244, 1582
BtsIMutI CAGTG 2 cut(s) 1553, 1664
BveI ACCTGC 1 cut(s) 846
Cac8I GCNNGC 3 cut(s) 100, 308, 1060
CfoI GCGC 3 cut(s) 116, 177, 782
Cfr13I GGNCC 2 cut(s) 143, 1383
CseI GACGC 1 cut(s) 260
Csp6I GTAC 4 cut(s) 537, 865, 1091, 1438
CviAII CATG 6 cut(s) 337, 373, 699, 1366, 1387, 1684
CviQI GTAC 4 cut(s) 537, 865, 1091, 1438
DdeI CTNAG 1 cut(s) 28
DpnI GATC 5 cut(s) 47, 138, 1245, 1350, 1674
DpnII GATC 5 cut(s) 45, 136, 1243, 1348, 1672
EaeI YGGCCR 1 cut(s) 1329
Eam1104I CTCTTC 4 cut(s) 58, 521, 955, 999
EarI CTCTTC 4 cut(s) 58, 521, 955, 999
Ecl136II GAGCTC 1 cut(s) 1097
Eco105I TACGTA 1 cut(s) 435
Eco130I CCWWGG 5 cut(s) 457, 990, 1201, 1344, 1386
Eco24I GRGCYC 1 cut(s) 1099
Eco47I GGWCC 1 cut(s) 1383
Eco47III AGCGCT 1 cut(s) 781
Eco53kI GAGCTC 1 cut(s) 1097
Eco57I CTGAAG 1 cut(s) 1425
EcoICRI GAGCTC 1 cut(s) 1097
EcoRI GAATTC 2 cut(s) 956, 1162
EcoRII CCWGG 3 cut(s) 677, 1233, 1415
EcoT14I CCWWGG 5 cut(s) 457, 990, 1201, 1344, 1386
EcoT38I GRGCYC 1 cut(s) 1099
ErhI CCWWGG 5 cut(s) 457, 990, 1201, 1344, 1386
FaeI CATG 6 cut(s) 340, 376, 702, 1369, 1390, 1687
FaqI GGGAC 2 cut(s) 434, 1396
FatI CATG 6 cut(s) 336, 372, 698, 1365, 1386, 1683
FbaI TGATCA 2 cut(s) 45, 136
Fnu4HI GCNGC 4 cut(s) 227, 311, 762, 1736
FokI GGATG 2 cut(s) 1251, 1589
FriOI GRGCYC 1 cut(s) 1099
Fsp4HI GCNGC 4 cut(s) 227, 311, 762, 1736
FspBI CTAG 8 cut(s) 89, 527, 1202, 1289, 1565, 1770, 1787, 1793
GlaI GCGC 3 cut(s) 115, 176, 781
GluI GCNGC 4 cut(s) 227, 311, 762, 1736
GsuI CTGGAG 2 cut(s) 700, 1399
HaeII RGCGCY 1 cut(s) 783
HaeIII GGCC 2 cut(s) 144, 1331
HapII CCGG 1 cut(s) 146
HgaI GACGC 1 cut(s) 260
HhaI GCGC 3 cut(s) 116, 177, 782
Hin1II CATG 6 cut(s) 340, 376, 702, 1369, 1390, 1687
Hin6I GCGC 3 cut(s) 114, 175, 780
HinP1I GCGC 3 cut(s) 114, 175, 780
HindIII AAGCTT 3 cut(s) 317, 1354, 1723
HinfI GANTC 8 cut(s) 491, 523, 530, 723, 802, 822, 1251, 1587
HpaII CCGG 1 cut(s) 146
HphI GGTGA 1 cut(s) 1223
Hpy166II GTNNAC 2 cut(s) 1051, 1105
Hpy188I TCNGA 6 cut(s) 31, 955, 1318, 1427, 1672, 1701
Hpy188III TCNNGA 4 cut(s) 275, 520, 527, 1565
Hpy8I GTNNAC 2 cut(s) 1051, 1105
Hpy99I CGWCG 1 cut(s) 1672
HpyAV CCTTC 8 cut(s) 67, 361, 908, 1485, 1565, 1598, 1689, 1703
HpyCH4III ACNGT 5 cut(s) 128, 467, 931, 986, 1548
HpyCH4IV ACGT 4 cut(s) 390, 434, 1047, 1053
HpyF10VI GCNNNNNNNGC 2 cut(s) 316, 468
HpyF3I CTNAG 1 cut(s) 28
HpySE526I ACGT 4 cut(s) 390, 434, 1047, 1053
Hsp92II CATG 6 cut(s) 340, 376, 702, 1369, 1390, 1687
HspAI GCGC 3 cut(s) 114, 175, 780
Ksp22I TGATCA 2 cut(s) 45, 136
Kzo9I GATC 5 cut(s) 45, 136, 1243, 1348, 1672
LmnI GCTCC 1 cut(s) 917
Lsp1109I GCAGC 3 cut(s) 238, 297, 773
LweI GCATC 1 cut(s) 1229
MaeI CTAG 8 cut(s) 89, 527, 1202, 1289, 1565, 1770, 1787, 1793
MaeII ACGT 4 cut(s) 390, 434, 1047, 1053
MaeIII GTNAC 3 cut(s) 299, 391, 712
MalI GATC 5 cut(s) 47, 138, 1245, 1350, 1674
MboI GATC 5 cut(s) 45, 136, 1243, 1348, 1672
MhlI GDGCHC 1 cut(s) 1099
MlsI TGGCCA 1 cut(s) 1331
MluNI TGGCCA 1 cut(s) 1331
MlyI GAGTC 1 cut(s) 811
MmeI TCCRAC 3 cut(s) 147, 1048, 1650
Mox20I TGGCCA 1 cut(s) 1331
MroXI GAANNNNTTC 1 cut(s) 1227
MscI TGGCCA 1 cut(s) 1331
MseI TTAA 4 cut(s) 378, 666, 809, 876
MslI CAYNNNNRTG 1 cut(s) 186
Msp20I TGGCCA 1 cut(s) 1331
MspI CCGG 1 cut(s) 146
MspR9I CCNGG 4 cut(s) 146, 679, 1235, 1417
Mva1269I GAATGC 4 cut(s) 212, 948, 1470, 1780
MvaI CCWGG 3 cut(s) 679, 1235, 1417
MvnI CGCG 1 cut(s) 116
MwoI GCNNNNNNNGC 2 cut(s) 316, 468
NciI CCSGG 1 cut(s) 146
NcoI CCATGG 1 cut(s) 1386
NdeII GATC 5 cut(s) 45, 136, 1243, 1348, 1672
NlaIII CATG 6 cut(s) 340, 376, 702, 1369, 1390, 1687
NlaIV GGNNCC 4 cut(s) 919, 1126, 1384, 1664
NspI RCATGY 1 cut(s) 340
PctI GAATGC 4 cut(s) 212, 948, 1470, 1780
PdmI GAANNNNTTC 1 cut(s) 1227
PfeI GAWTC 7 cut(s) 491, 523, 530, 723, 822, 1251, 1587
Pfl23II CGTACG 1 cut(s) 864
PfoI TCCNGGA 1 cut(s) 1415
PkrI GCNGC 4 cut(s) 228, 312, 763, 1737
PleI GAGTC 1 cut(s) 810
PpsI GAGTC 1 cut(s) 810
Ppu21I YACGTR 2 cut(s) 435, 1048
PshBI ATTAAT 1 cut(s) 378
PsiI TTATAA 1 cut(s) 1557
Psp124BI GAGCTC 1 cut(s) 1099
Psp1406I AACGTT 1 cut(s) 390
Psp6I CCWGG 3 cut(s) 677, 1233, 1415
PspGI CCWGG 3 cut(s) 677, 1233, 1415
PspLI CGTACG 1 cut(s) 864
PspN4I GGNNCC 4 cut(s) 919, 1126, 1384, 1664
PspPI GGNCC 2 cut(s) 143, 1383
PstI CTGCAG 2 cut(s) 1134, 1153
RsaI GTAC 4 cut(s) 538, 866, 1092, 1439
RsaNI GTAC 4 cut(s) 537, 865, 1091, 1438
RseI CAYNNNNRTG 1 cut(s) 186
SacI GAGCTC 1 cut(s) 1099
SaqAI TTAA 4 cut(s) 378, 666, 809, 876
SatI GCNGC 4 cut(s) 227, 311, 762, 1736
Sau3AI GATC 5 cut(s) 45, 136, 1243, 1348, 1672
Sau96I GGNCC 2 cut(s) 143, 1383
SbfI CCTGCAGG 1 cut(s) 1134
SchI GAGTC 1 cut(s) 811
ScrFI CCNGG 4 cut(s) 146, 679, 1235, 1417
SdaI CCTGCAGG 1 cut(s) 1134
SduI GDGCHC 1 cut(s) 1099
SfaNI GCATC 1 cut(s) 1229
SfcI CTRYAG 4 cut(s) 127, 1130, 1149, 1371
SinI GGWCC 1 cut(s) 1383
SmiMI CAYNNNNRTG 1 cut(s) 186
SmlI CTYRAG 2 cut(s) 1475, 1726
SmoI CTYRAG 2 cut(s) 1475, 1726
SnaBI TACGTA 1 cut(s) 435
SpeI ACTAGT 1 cut(s) 88
Sse8387I CCTGCAGG 1 cut(s) 1134
SsiI CCGC 1 cut(s) 1736
SspI AATATT 2 cut(s) 581, 1501
SspMI CTAG 8 cut(s) 89, 527, 1202, 1289, 1565, 1770, 1787, 1793
SstI GAGCTC 1 cut(s) 1099
StyD4I CCNGG 4 cut(s) 144, 677, 1233, 1415
StyI CCWWGG 5 cut(s) 457, 990, 1201, 1344, 1386
TaaI ACNGT 5 cut(s) 128, 467, 931, 986, 1548
TaiI ACGT 4 cut(s) 393, 437, 1050, 1056
TaqI TCGA 3 cut(s) 366, 805, 1263
TatI WGTACW 1 cut(s) 536
TauI GCSGC 1 cut(s) 1738
TfiI GAWTC 7 cut(s) 491, 523, 530, 723, 822, 1251, 1587
Tru1I TTAA 4 cut(s) 378, 666, 809, 876
Tru9I TTAA 4 cut(s) 378, 666, 809, 876
TscAI CASTG 2 cut(s) 1553, 1664
TseI GCWGC 3 cut(s) 226, 310, 761
TspGWI ACGGA 1 cut(s) 1529
TspRI CASTG 2 cut(s) 1553, 1664
VpaK11BI GGWCC 1 cut(s) 1383
VspI ATTAAT 1 cut(s) 378
XapI RAATTY 7 cut(s) 193, 956, 1162, 1311, 1420, 1533, 1617
XbaI TCTAGA 2 cut(s) 526, 1564
XceI RCATGY 1 cut(s) 340
XcmI CCANNNNNNNNNTGG 2 cut(s) 696, 1690
XmaJI CCTAGG 1 cut(s) 1201
XmnI GAANNNNTTC 1 cut(s) 1227
XspI CTAG 8 cut(s) 89, 527, 1202, 1289, 1565, 1770, 1787, 1793
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.