pycom02g21410

receptor-like protein kinase

Design Primers CRISPR Design

Basic Information

Type: gene
Biological Identity
pyrus_communis
Chr2
OG0000107
Physical Location & Seq
Forward (+)
19594946 .. 19596862
1917 bp
Loading structure...
UTR
Exon/CDS
Intron
pycom02g21410.2

Sequence Viewer

Length: 1770 bp
ATGCAGAAATTGATCGTCTCTTCCTTTTGCATATTGATACTGGTTTTCTTCAAACTAGTTGGAGCAAGCCAGTATATGTGCGCGGAATCTAACTGTAGCAATGATCAAGGCCCGGCTATCCATTTCCCATTGAACATCAGGCGCACACATCATTGTGGAAATCCTGGGCTTGAATGCAATGGGAGACATGAGCAGCAAATACTAATCAAATTTTTTGTCAAACACATAGATTACAAGCGTCAGGAAATCCAAGTCTATTTCCCGAGTAACTGCCTGCTGCTAAAGCCTGTTGAAATCCCAAACATGCCACGCTCTCCCTTCAACGTGTCAGTCGATGACATGAGAAACGTTACCTTATTCAGTTGTCCTACTTCTGTTGCAAGTCTATTTACTAAGCAAGTCCCCTGCCTCGGCGACCGTGGCAAGAGAACTTATGCCATTTATTCTGACTATGATTTTGAAATTCTCTTCCGGAATCTACGATCTTGTACAAAAATGTATGATGTTCCAATACCAATTGGATATGGTCGTCGTTTCAAATGGTCTATACCAAATTGCAGAAAATGTGGAGAGGGAAAGAGGTGTGGATGGCAGAACAATGGCATCAACAGTGAAATTAAATGTCTTCCCTGGAAGAGACCAAGCAACACATGGAAAAAAGTGCTTACAGGTGGAATCCTGGGTGCTTTGCTTCTTGTTCTACTGATGATTGCAGCATATCGGGTATATAGCGCTGATAGAAAGGAGAAAGAGAGTCGATTAAGAATTGAAAGATTCTTGGAGGACTACAAAGCACTCAAACCAAGCAGGTATTCGTACGCAGATATTAAGAGGATTACAAATCAATTCAAGGACAAGTTAGGCGAAGGAGCCTATGGAACTGTCTTCAAGGGAATGCTCTCTTCTGAATTCCTTATTGCTGTCAAAGTTCTCAACAGTTCCAAGGGAGATGGGGAAGAGTTCGTAAATGAAGTGCGAACGATGGGTCATATCCACCATGTCAACGTGGCTCGCTTGGTTGGATTTTGTGCTGATGGATTTGCACGAGCTCTTGTTTACGAGTTCTTCCCCAATGGTTCCCTGCAGGATTTCATTTCATCTGCAGATAGTAAGAATTCATTTCTTGGTTGGGATAAGCTGCAAGATATTGCCCTAGGCATAGCCAAAGGAATTGAATATCTTCACCAGGGATGCGATCTACGAATCCTGCATTTCGACATCAAACCCCATAATGTTTTGCTAGACCAAAACTTCACTCCAAAAATTTCTGATTTTGGTTTGGCCAAGTTATGTTCCAAGGATCAAAGCTTGGTGTCCATGACTACAGCTAAGGGGACCATGGGCTACATTGCACCCGAAGTGTTCTCCAGGAATTTTGGAAATGTGTCTTACAAGGCAGATGTCTATAGCTATGGAATGCTGCTACTTGAGATGGTAGGAGGAAGGAAGAATATTGGTTCAATCACGGATAACACTACAAATGAAATTTACTATCCACAGTGGATTTATAATCTTCTAGAGGAAGGGGATGACCTACGAATCCATATTGGAGAAGAAGGAGATGGTAAAATTCCAAAGAAACTTGCAATTATAGGGCTATGGTGTATCCAGTGGCACCCGTCGGATCGTCCTTCCATGAAAACAGTTGTTCAGATGTTGCAAGGAGGAGGAGAAAGCTTGAGTATGCCACCTAATCCCTTTGTGCCTACTGGTCCTACATCTAGAAATGCTAGACGCCTAGAGCTAGAAGCTATTGCTGAATTAGAGTAA
Functional Annotation
Gene Ontology
Molecular Function
Biological Process
Cellular Component
No ontology terms assigned.
KEGG Pathways
Metabolic & Signaling
No pathways identified.
Pfam Domains
Protein Families
GUB_WAK_bind Pkinase Pkinase_Tyr

Protein Analysis

590

Amino Acids

66.63

Weight (kDa)

8.89

Isoelectric Point (pI)

44.16

Instability Index
Protein Domains (Pfam)
No Pfam domains detected for this protein.
Hydrophobicity Profile (Kyte-Doolittle)
AI Structure Prediction Report
Calculating structure properties...

Genomic Context

Gene Family Tree

Species Filter
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Publication-ready
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Orthologous Genes (Group: OG0000107)

Species Orthologous Gene IDs
fragaria_vesca FvH4_1g03331 FvH4_1g03331 FvH4_4g22040 FvH4_4g34420 FvH4_4g34420 FvH4_4g34420 FvH4_6g23840 FvH4_6g28420 FvH4_6g52680 FvH4_7g06000 FvH4_7g06000 FvH4_7g06020 FvH4_7g06020 FvH4_7g06020 FvH4_7g06040
malus_domestica MD01G1059600.v1.1 MD02G1234300.v1.1 MD02G1234800.v1.1 MD02G1235400.v1.1 MD02G1245600.v1.1 MD02G1246100.v1.1 MD02G1246600.v1.1 MD02G1247200.v1.1 MD02G1247600.v1.1 MD02G1249400.v1.1 MD02G1249800.v1.1 MD02G1250400.v1.1 MD02G1251000.v1.1 MD02G1252000.v1.1 MD02G1252900.v1.1 MD02G1253800.v1.1 MD02G1254300.v1.1 MD02G1273700.v1.1 MD02G1274600.v1.1 MD07G1070200.v1.1 MD07G1070500.v1.1 MD07G1070800.v1.1 MD07G1071300.v1.1 MD07G1138100.v1.1 MD12G1080000.v1.1 MD12G1251300.v1.1 MD12G1251700.v1.1
prunus_persica Prupe.2G047400_v2.0.a1 Prupe.2G047400_v2.0.a1 Prupe.2G067000_v2.0.a1 Prupe.2G087200_v2.0.a1 Prupe.2G087300_v2.0.a1 Prupe.2G087600_v2.0.a1 Prupe.2G087900_v2.0.a1 Prupe.2G088200_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088400_v2.0.a1 Prupe.2G088900_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089000_v2.0.a1 Prupe.2G089100_v2.0.a1 Prupe.2G103400_v2.0.a1 Prupe.2G104000_v2.0.a1 Prupe.2G312100_v2.0.a1 Prupe.6G137900_v2.0.a1 Prupe.6G142200_v2.0.a1
pyrus_communis pycom01g01220 pycom01g08850 pycom01g08880 pycom01g08910 pycom01g08950 pycom02g20220 pycom02g21130 pycom02g21370 pycom02g21390 pycom02g21410 pycom02g21530 pycom02g21570 pycom02g23470 pycom02g23500 pycom07g05390
rosa_chinensis RchiOBHm_Chr1g0324371 RchiOBHm_Chr1g0324431 RchiOBHm_Chr1g0325121 RchiOBHm_Chr1g0328351 RchiOBHm_Chr1g0328391 RchiOBHm_Chr1g0329541 RchiOBHm_Chr1g0333301 RchiOBHm_Chr1g0333311 RchiOBHm_Chr1g0333361 RchiOBHm_Chr1g0333431 RchiOBHm_Chr1g0333461 RchiOBHm_Chr1g0333471 RchiOBHm_Chr1g0333541 RchiOBHm_Chr1g0333621 RchiOBHm_Chr1g0333631 RchiOBHm_Chr1g0334291 RchiOBHm_Chr1g0334781 RchiOBHm_Chr1g0334821 RchiOBHm_Chr3g0482471 RchiOBHm_Chr5g0047431 RchiOBHm_Chr5g0047561 RchiOBHm_Chr5g0047571 RchiOBHm_Chr5g0047611 RchiOBHm_Chr5g0047651 RchiOBHm_Chr5g0047751 RchiOBHm_Chr5g0047821 RchiOBHm_Chr5g0047961 RchiOBHm_Chr5g0048061 RchiOBHm_Chr6g0283301
rosa_laevigata RLG00000019267 RLG00000023349 RLG00000029423 RLG00000029545 RLG00000029554 RLG00000029607 RLG00000029610 RLG00000029611 RLG00000029614 RLG00000029616 RLG00000029931 RLG00000029932 RLG00000034493
rosa_multiflora Rmu_co8235835.1_g000001 Rmu_sc0000148.1_g000011 Rmu_sc0000148.1_g000032 Rmu_sc0000148.1_g000074 Rmu_sc0000215.1_g000031 Rmu_sc0000494.1_g000013 Rmu_sc0000574.1_g000036 Rmu_sc0000580.1_g000030 Rmu_sc0000580.1_g000031 Rmu_sc0000725.1_g000007 Rmu_sc0000725.1_g000008 Rmu_sc0000725.1_g000009 Rmu_sc0000982.1_g000049 Rmu_sc0001009.1_g000037 Rmu_sc0002955.1_g000008 Rmu_sc0002955.1_g000024 Rmu_sc0002955.1_g000028 Rmu_sc0002965.1_g000023 Rmu_sc0002965.1_g000024 Rmu_sc0002969.1_g000008 Rmu_sc0003435.1_g000013 Rmu_sc0003441.1_g000002 Rmu_sc0003441.1_g000012 Rmu_sc0003441.1_g000034 Rmu_sc0004646.1_g000044 Rmu_sc0004736.1_g000015 Rmu_sc0005613.1_g000001 Rmu_sc0006031.1_g000009 Rmu_sc0007681.1_g000010 Rmu_sc0013030.1_g000001 Rmu_sc0013038.1_g000011 Rmu_sc0016170.1_g000008 Rmu_sc0019659.1_g000001 Rmu_sc0021068.1_g000002 Rmu_ssc0000388.1_g000040
rosa_roxburghii Rroxscaffold_159G00432810 Rroxscaffold_1G00033860 Rroxscaffold_1G00033950 Rroxscaffold_1G00033960 Rroxscaffold_4G00316500 Rroxscaffold_4G00316570 Rroxscaffold_4G00317370 Rroxscaffold_4G00317440 Rroxscaffold_4G00317510 Rroxscaffold_4G00317530 Rroxscaffold_4G00317540 Rroxscaffold_4G00317620 Rroxscaffold_4G00317630 Rroxscaffold_4G00320890 Rroxscaffold_4G00321680 Rroxscaffold_4G00324900 Rroxscaffold_6G00399330
rosa_rugosa Rorug01G0074700 Rorug01G0081200 Rorug01G0103300 Rorug01G0108500 Rorug01G0108700 Rorug01G0108800 Rorug01G0109100 Rorug01G0109200 Rorug01G0109200 Rorug01G0109800 Rorug01G0109800 Rorug01G0110500 Rorug01G0116300 Rorug01G0116800 Rorug02G0305500 Rorug02G0305600 Rorug03G0071700 Rorug05G0163600 Rorug05G0236200 Rorug06G0030200
rosa_samantha Rh1AG092400 Rh1AG099600 Rh1AG131700 Rh1AG131900 Rh1AG132100 Rh1AG132900 Rh1AG140800 Rh1BG028200 Rh1BG074500 Rh1BG079300 Rh1BG101100 Rh1CG067200 Rh1CG125300 Rh1CG125600 Rh1CG125700 Rh1CG126000 Rh1CG127100 Rh1CG127200 Rh1CG132700 Rh1DG144900 Rh2CG455700 Rh3BG018200 Rh3DG018400 Rh3DG275900 Rh4AG065500 Rh4BG330300 Rh4CG345700 Rh5AG315100 Rh5AG315500 Rh5BG324300 Rh5BG324700 Rh5CG351000 Rh5CG351200 Rh5CG351600 Rh5CG351800 Rh5CG352100 Rh6AG265600 Rh6CG267700 Rh6DG261200
rosa_wichuraiana Rw0G001010 Rw0G003190 Rw0G013160 Rw0G022840 Rw1G007100 Rw1G007220 Rw1G007760 Rw1G010730 Rw1G010790 Rw1G010870 Rw1G010910 Rw1G010940 Rw1G011000 Rw1G011010 Rw1G011040 Rw1G011620 Rw2G029190 Rw3G022330 Rw5G029440 Rw5G029470 Rw5G029560

Restriction Enzyme Sites

1 / 10
Enzyme Recognition Site Cut Count Positions (bp)
AanI TTATAA 1 cut(s) 1509
Acc36I ACCTGC 1 cut(s) 798
AccB1I GGYRCC 1 cut(s) 1614
AccII CGCG 1 cut(s) 83
AccIII TCCGGA 1 cut(s) 471
AciI CCGC 1 cut(s) 83
AclI AACGTT 1 cut(s) 348
AclWI GGATC 2 cut(s) 1308, 1632
AcoI YGGCCR 1 cut(s) 1281
AcsI RAATTY 8 cut(s) 209, 462, 908, 1114, 1263, 1372, 1485, 1569
AcyI GRCGYC 1 cut(s) 1735
AfaI GTAC 2 cut(s) 490, 818
AfeI AGCGCT 1 cut(s) 733
AfiI CCNNNNNNNGG 1 cut(s) 410
AflIII ACRYGT 1 cut(s) 324
AhlI ACTAGT 1 cut(s) 55
AjnI CCWGG 5 cut(s) 163, 629, 678, 1185, 1367
AjuI GAANNNNNNNTTGG 2 cut(s) 796, 828
AluBI AGCT 8 cut(s) 1049, 1138, 1308, 1328, 1410, 1677, 1744, 1751
AluI AGCT 8 cut(s) 1049, 1138, 1308, 1328, 1410, 1677, 1744, 1751
Alw21I GWGCWC 1 cut(s) 1051
Alw26I GTCTC 3 cut(s) 22, 178, 631
AlwI GGATC 2 cut(s) 1308, 1632
Ama87I CYCGRG 1 cut(s) 262
Aor13HI TCCGGA 1 cut(s) 471
Aor51HI AGCGCT 1 cut(s) 733
AoxI GGCC 2 cut(s) 109, 1281
ApeKI GCWGC 5 cut(s) 193, 277, 713, 1138, 1420
ApoI RAATTY 8 cut(s) 209, 462, 908, 1114, 1263, 1372, 1485, 1569
ArsI GACNNNNNNTTYG 6 cut(s) 201, 233, 440, 472, 970, 1002
Asp700I GAANNNNTTC 1 cut(s) 1179
AspA2I CCTAGG 1 cut(s) 1153
AspLEI GCGC 3 cut(s) 83, 144, 734
AspS9I GGNCC 3 cut(s) 110, 1335, 1712
AsuC2I CCSGG 1 cut(s) 113
AsuHPI GGTGA 1 cut(s) 1175
AvaI CYCGRG 1 cut(s) 262
AvaII GGWCC 2 cut(s) 1335, 1712
AvrII CCTAGG 1 cut(s) 1153
BalI TGGCCA 1 cut(s) 1283
BanI GGYRCC 1 cut(s) 1614
BanII GRGCYC 1 cut(s) 1051
BauI CACGAG 1 cut(s) 1044
BbsI GAAGAC 2 cut(s) 617, 877
Bbv12I GWGCWC 1 cut(s) 1051
BbvI GCAGC 5 cut(s) 205, 264, 725, 1125, 1407
BccI CCATC 6 cut(s) 582, 944, 976, 1028, 1426, 1556
BciT130I CCWGG 5 cut(s) 165, 631, 680, 1187, 1369
BciVI GTATCC 1 cut(s) 1616
BclI TGATCA 1 cut(s) 103
BcnI CCSGG 1 cut(s) 113
BcoDI GTCTC 3 cut(s) 22, 178, 631
BcuI ACTAGT 1 cut(s) 55
BfaI CTAG 8 cut(s) 56, 1154, 1241, 1517, 1722, 1731, 1739, 1745
BfmI CTRYAG 5 cut(s) 94, 1082, 1101, 1323, 1405
BfoI RGCGCY 1 cut(s) 735
BfuAI ACCTGC 1 cut(s) 798
BfuI GTATCC 1 cut(s) 1616
BisI GCNGC 5 cut(s) 194, 278, 714, 1139, 1421
BlnI CCTAGG 1 cut(s) 1153
BlsI GCNGC 5 cut(s) 195, 279, 715, 1140, 1422
Bme1390I CCNGG 6 cut(s) 113, 165, 631, 680, 1187, 1369
Bme18I GGWCC 2 cut(s) 1335, 1712
BmeT110I CYCGRG 1 cut(s) 262
BmgT120I GGNCC 3 cut(s) 110, 1335, 1712
BmiI GGNNCC 4 cut(s) 871, 1078, 1336, 1616
BmrFI CCNGG 6 cut(s) 113, 165, 631, 680, 1187, 1369
BmsI GCATC 2 cut(s) 612, 1181
BpiI GAAGAC 2 cut(s) 617, 877
BpmI CTGGAG 1 cut(s) 1351
Bpu10I CCTNAGC 1 cut(s) 1329
BpuEI CTTGAG 2 cut(s) 1448, 1699
BpuMI CCSGG 1 cut(s) 113
BsaHI GRCGYC 1 cut(s) 1735
BsaI GGTCTC 1 cut(s) 631
BsaWI WCCGGW 1 cut(s) 471
Bsc4I CCNNNNNNNGG 1 cut(s) 410
Bse1I ACTGG 4 cut(s) 45, 70, 1609, 1714
Bse3DI GCAATG 3 cut(s) 106, 184, 1347
BseAI TCCGGA 1 cut(s) 471
BseBI CCWGG 5 cut(s) 165, 631, 680, 1187, 1369
BseGI GGATG 3 cut(s) 593, 1196, 1534
BseLI CCNNNNNNNGG 1 cut(s) 410
BseMI GCAATG 3 cut(s) 106, 184, 1347
BseNI ACTGG 4 cut(s) 45, 70, 1609, 1714
BseRI GAGGAG 2 cut(s) 1680, 1683
BseXI GCAGC 5 cut(s) 205, 264, 725, 1125, 1407
Bsh1236I CGCG 1 cut(s) 83
Bsh1285I CGRYCG 1 cut(s) 418
BshFI GGCC 2 cut(s) 111, 1283
BshNI GGYRCC 1 cut(s) 1614
BsiEI CGRYCG 1 cut(s) 418
BsiHKAI GWGCWC 1 cut(s) 1051
BsiHKCI CYCGRG 1 cut(s) 262
BsiSI CCGG 2 cut(s) 113, 472
BsiWI CGTACG 1 cut(s) 816
BslFI GGGAC 2 cut(s) 386, 1348
BslI CCNNNNNNNGG 1 cut(s) 410
BsmAI GTCTC 3 cut(s) 22, 178, 631
BsmBI CGTCTC 1 cut(s) 22
BsmFI GGGAC 2 cut(s) 386, 1348
BsmI GAATGC 3 cut(s) 179, 900, 1422
BsnI GGCC 2 cut(s) 111, 1283
Bso31I GGTCTC 1 cut(s) 631
BsoBI CYCGRG 1 cut(s) 262
Bsp1286I GDGCHC 1 cut(s) 1051
Bsp13I TCCGGA 1 cut(s) 471
Bsp1407I TGTACA 1 cut(s) 488
Bsp143I GATC 6 cut(s) 12, 103, 482, 1195, 1300, 1624
Bsp19I CCATGG 1 cut(s) 1338
BspACI CCGC 1 cut(s) 83
BspANI GGCC 2 cut(s) 111, 1283
BspEI TCCGGA 1 cut(s) 471
BspFNI CGCG 1 cut(s) 83
BspLI GGNNCC 4 cut(s) 871, 1078, 1336, 1616
BspMAI CTGCAG 2 cut(s) 1086, 1105
BspMI ACCTGC 1 cut(s) 798
BspPI GGATC 2 cut(s) 1308, 1632
BspT107I GGYRCC 1 cut(s) 1614
BspTNI GGTCTC 1 cut(s) 631
BsrDI GCAATG 3 cut(s) 106, 184, 1347
BsrGI TGTACA 1 cut(s) 488
BsrI ACTGG 4 cut(s) 45, 70, 1609, 1714
BssMI GATC 6 cut(s) 12, 103, 482, 1195, 1300, 1624
BssNI GRCGYC 1 cut(s) 1735
BssSI CACGAG 1 cut(s) 1044
BssT1I CCWWGG 4 cut(s) 942, 1153, 1296, 1338
Bst2BI CACGAG 1 cut(s) 1044
Bst2UI CCWGG 5 cut(s) 165, 631, 680, 1187, 1369
Bst4CI ACNGT 7 cut(s) 95, 419, 611, 883, 938, 1500, 1645
Bst6I CTCTTC 5 cut(s) 25, 473, 629, 907, 951
BstACI GRCGYC 1 cut(s) 1735
BstAUI TGTACA 1 cut(s) 488
BstC8I GCNNGC 3 cut(s) 67, 275, 1012
BstDEI CTNAG 2 cut(s) 393, 1329
BstDSI CCRYGG 2 cut(s) 418, 1338
BstF5I GGATG 3 cut(s) 593, 1196, 1534
BstFNI CGCG 1 cut(s) 83
BstH2I RGCGCY 1 cut(s) 735
BstHHI GCGC 3 cut(s) 83, 144, 734
BstKTI GATC 6 cut(s) 15, 106, 485, 1198, 1303, 1627
BstMAI GTCTC 3 cut(s) 22, 178, 631
BstMBI GATC 6 cut(s) 12, 103, 482, 1195, 1300, 1624
BstMCI CGRYCG 1 cut(s) 418
BstMWI GCNNNNNNNGC 2 cut(s) 283, 420
BstNI CCWGG 5 cut(s) 165, 631, 680, 1187, 1369
BstNSI RCATGY 1 cut(s) 307
BstSCI CCNGG 6 cut(s) 111, 163, 629, 678, 1185, 1367
BstSFI CTRYAG 5 cut(s) 94, 1082, 1101, 1323, 1405
BstUI CGCG 1 cut(s) 83
BstV1I GCAGC 5 cut(s) 205, 264, 725, 1125, 1407
BstV2I GAAGAC 2 cut(s) 617, 877
BsuI GTATCC 1 cut(s) 1616
BsuRI GGCC 2 cut(s) 111, 1283
BtgI CCRYGG 2 cut(s) 418, 1338
BtsCI GGATG 3 cut(s) 593, 1196, 1534
BtsIMutI CAGTG 3 cut(s) 616, 1505, 1616
BveI ACCTGC 1 cut(s) 798
Cac8I GCNNGC 3 cut(s) 67, 275, 1012
CfoI GCGC 3 cut(s) 83, 144, 734
Cfr13I GGNCC 3 cut(s) 110, 1335, 1712
CseI GACGC 2 cut(s) 227, 1743
Csp6I GTAC 2 cut(s) 489, 817
CviAII CATG 8 cut(s) 188, 304, 340, 651, 998, 1318, 1339, 1636
CviQI GTAC 2 cut(s) 489, 817
DdeI CTNAG 2 cut(s) 393, 1329
DpnI GATC 6 cut(s) 14, 105, 484, 1197, 1302, 1626
DpnII GATC 6 cut(s) 12, 103, 482, 1195, 1300, 1624
EaeI YGGCCR 1 cut(s) 1281
Eam1104I CTCTTC 5 cut(s) 25, 473, 629, 907, 951
EarI CTCTTC 5 cut(s) 25, 473, 629, 907, 951
Ecl136II GAGCTC 1 cut(s) 1049
Eco130I CCWWGG 4 cut(s) 942, 1153, 1296, 1338
Eco24I GRGCYC 1 cut(s) 1051
Eco31I GGTCTC 1 cut(s) 631
Eco47I GGWCC 2 cut(s) 1335, 1712
Eco47III AGCGCT 1 cut(s) 733
Eco53kI GAGCTC 1 cut(s) 1049
Eco88I CYCGRG 1 cut(s) 262
EcoICRI GAGCTC 1 cut(s) 1049
EcoRI GAATTC 2 cut(s) 908, 1114
EcoRII CCWGG 5 cut(s) 163, 629, 678, 1185, 1367
EcoT14I CCWWGG 4 cut(s) 942, 1153, 1296, 1338
EcoT38I GRGCYC 1 cut(s) 1051
ErhI CCWWGG 4 cut(s) 942, 1153, 1296, 1338
Esp3I CGTCTC 1 cut(s) 22
FaeI CATG 8 cut(s) 191, 307, 343, 654, 1001, 1321, 1342, 1639
FaqI GGGAC 2 cut(s) 386, 1348
FatI CATG 8 cut(s) 187, 303, 339, 650, 997, 1317, 1338, 1635
FbaI TGATCA 1 cut(s) 103
Fnu4HI GCNGC 5 cut(s) 194, 278, 714, 1139, 1421
FokI GGATG 3 cut(s) 600, 1203, 1541
FriOI GRGCYC 1 cut(s) 1051
Fsp4HI GCNGC 5 cut(s) 194, 278, 714, 1139, 1421
FspBI CTAG 8 cut(s) 56, 1154, 1241, 1517, 1722, 1731, 1739, 1745
GlaI GCGC 3 cut(s) 82, 143, 733
GluI GCNGC 5 cut(s) 194, 278, 714, 1139, 1421
GsuI CTGGAG 1 cut(s) 1351
HaeII RGCGCY 1 cut(s) 735
HaeIII GGCC 2 cut(s) 111, 1283
HapII CCGG 2 cut(s) 113, 472
HgaI GACGC 2 cut(s) 227, 1743
HhaI GCGC 3 cut(s) 83, 144, 734
Hin1I GRCGYC 1 cut(s) 1735
Hin1II CATG 8 cut(s) 191, 307, 343, 654, 1001, 1321, 1342, 1639
Hin6I GCGC 3 cut(s) 81, 142, 732
HinP1I GCGC 3 cut(s) 81, 142, 732
HincII GTYRAC 1 cut(s) 1003
HindII GTYRAC 1 cut(s) 1003
HindIII AAGCTT 2 cut(s) 1306, 1675
HinfI GANTC 7 cut(s) 86, 475, 675, 754, 774, 1203, 1539
HpaII CCGG 2 cut(s) 113, 472
HphI GGTGA 1 cut(s) 1175
Hpy166II GTNNAC 2 cut(s) 1003, 1057
Hpy188I TCNGA 5 cut(s) 448, 907, 1270, 1624, 1653
Hpy188III TCNNGA 5 cut(s) 242, 262, 472, 1517, 1722
Hpy8I GTNNAC 2 cut(s) 1003, 1057
Hpy99I CGWCG 2 cut(s) 534, 1624
HpyAV CCTTC 6 cut(s) 328, 860, 1437, 1517, 1550, 1641
HpyCH4III ACNGT 7 cut(s) 95, 419, 611, 883, 938, 1500, 1645
HpyCH4IV ACGT 3 cut(s) 324, 348, 1005
HpyF10VI GCNNNNNNNGC 2 cut(s) 283, 420
HpyF3I CTNAG 2 cut(s) 393, 1329
HpySE526I ACGT 3 cut(s) 324, 348, 1005
Hsp92I GRCGYC 1 cut(s) 1735
Hsp92II CATG 8 cut(s) 191, 307, 343, 654, 1001, 1321, 1342, 1639
HspAI GCGC 3 cut(s) 81, 142, 732
Kpn2I TCCGGA 1 cut(s) 471
Ksp22I TGATCA 1 cut(s) 103
Kzo9I GATC 6 cut(s) 12, 103, 482, 1195, 1300, 1624
LmnI GCTCC 2 cut(s) 62, 869
Lsp1109I GCAGC 5 cut(s) 205, 264, 725, 1125, 1407
LweI GCATC 2 cut(s) 612, 1181
MaeI CTAG 8 cut(s) 56, 1154, 1241, 1517, 1722, 1731, 1739, 1745
MaeII ACGT 3 cut(s) 324, 348, 1005
MaeIII GTNAC 2 cut(s) 266, 349
MalI GATC 6 cut(s) 14, 105, 484, 1197, 1302, 1626
MboI GATC 6 cut(s) 12, 103, 482, 1195, 1300, 1624
MfeI CAATTG 1 cut(s) 516
MhlI GDGCHC 1 cut(s) 1051
MlsI TGGCCA 1 cut(s) 1283
MluNI TGGCCA 1 cut(s) 1283
MlyI GAGTC 1 cut(s) 763
MmeI TCCRAC 3 cut(s) 40, 1000, 1602
MnlI CCTC 9 cut(s) 419, 565, 573, 775, 825, 1433, 1513, 1658, 1661
Mox20I TGGCCA 1 cut(s) 1283
MroI TCCGGA 1 cut(s) 471
MroXI GAANNNNTTC 1 cut(s) 1179
MscI TGGCCA 1 cut(s) 1283
MseI TTAA 3 cut(s) 618, 761, 828
MslI CAYNNNNRTG 1 cut(s) 153
Msp20I TGGCCA 1 cut(s) 1283
MspI CCGG 2 cut(s) 113, 472
MspR9I CCNGG 6 cut(s) 113, 165, 631, 680, 1187, 1369
MunI CAATTG 1 cut(s) 516
Mva1269I GAATGC 3 cut(s) 179, 900, 1422
MvaI CCWGG 5 cut(s) 165, 631, 680, 1187, 1369
MvnI CGCG 1 cut(s) 83
MwoI GCNNNNNNNGC 2 cut(s) 283, 420
NciI CCSGG 1 cut(s) 113
NcoI CCATGG 1 cut(s) 1338
NdeII GATC 6 cut(s) 12, 103, 482, 1195, 1300, 1624
NlaIII CATG 8 cut(s) 191, 307, 343, 654, 1001, 1321, 1342, 1639
NlaIV GGNNCC 4 cut(s) 871, 1078, 1336, 1616
NmeAIII GCCGAG 1 cut(s) 390
NspI RCATGY 1 cut(s) 307
PcsI WCGNNNNNNNCGW 1 cut(s) 330
PctI GAATGC 3 cut(s) 179, 900, 1422
PdmI GAANNNNTTC 1 cut(s) 1179
PfeI GAWTC 6 cut(s) 86, 475, 675, 774, 1203, 1539
Pfl23II CGTACG 1 cut(s) 816
PfoI TCCNGGA 1 cut(s) 1367
PkrI GCNGC 5 cut(s) 195, 279, 715, 1140, 1422
PleI GAGTC 1 cut(s) 762
PpsI GAGTC 1 cut(s) 762
PsiI TTATAA 1 cut(s) 1509
Psp124BI GAGCTC 1 cut(s) 1051
Psp1406I AACGTT 1 cut(s) 348
Psp6I CCWGG 5 cut(s) 163, 629, 678, 1185, 1367
PspGI CCWGG 5 cut(s) 163, 629, 678, 1185, 1367
PspLI CGTACG 1 cut(s) 816
PspN4I GGNNCC 4 cut(s) 871, 1078, 1336, 1616
PspPI GGNCC 3 cut(s) 110, 1335, 1712
PstI CTGCAG 2 cut(s) 1086, 1105
RsaI GTAC 2 cut(s) 490, 818
RsaNI GTAC 2 cut(s) 489, 817
RseI CAYNNNNRTG 1 cut(s) 153
SacI GAGCTC 1 cut(s) 1051
SaqAI TTAA 3 cut(s) 618, 761, 828
SatI GCNGC 5 cut(s) 194, 278, 714, 1139, 1421
Sau3AI GATC 6 cut(s) 12, 103, 482, 1195, 1300, 1624
Sau96I GGNCC 3 cut(s) 110, 1335, 1712
SbfI CCTGCAGG 1 cut(s) 1086
SchI GAGTC 1 cut(s) 763
ScrFI CCNGG 6 cut(s) 113, 165, 631, 680, 1187, 1369
SdaI CCTGCAGG 1 cut(s) 1086
SduI GDGCHC 1 cut(s) 1051
SfaNI GCATC 2 cut(s) 612, 1181
SfcI CTRYAG 5 cut(s) 94, 1082, 1101, 1323, 1405
SinI GGWCC 2 cut(s) 1335, 1712
SmiMI CAYNNNNRTG 1 cut(s) 153
SmlI CTYRAG 2 cut(s) 1427, 1678
SmoI CTYRAG 2 cut(s) 1427, 1678
SpeI ACTAGT 1 cut(s) 55
Sse8387I CCTGCAGG 1 cut(s) 1086
SsiI CCGC 1 cut(s) 83
SspI AATATT 1 cut(s) 1453
SspMI CTAG 8 cut(s) 56, 1154, 1241, 1517, 1722, 1731, 1739, 1745
SstI GAGCTC 1 cut(s) 1051
StyD4I CCNGG 6 cut(s) 111, 163, 629, 678, 1185, 1367
StyI CCWWGG 4 cut(s) 942, 1153, 1296, 1338
TaaI ACNGT 7 cut(s) 95, 419, 611, 883, 938, 1500, 1645
TaiI ACGT 3 cut(s) 327, 351, 1008
TaqI TCGA 3 cut(s) 333, 757, 1215
TatI WGTACW 1 cut(s) 488
TfiI GAWTC 6 cut(s) 86, 475, 675, 774, 1203, 1539
Tru1I TTAA 3 cut(s) 618, 761, 828
Tru9I TTAA 3 cut(s) 618, 761, 828
TscAI CASTG 3 cut(s) 616, 1505, 1616
TseI GCWGC 5 cut(s) 193, 277, 713, 1138, 1420
TspDTI ATGAA 6 cut(s) 984, 1081, 1086, 1107, 1497, 1652
TspGWI ACGGA 1 cut(s) 1481
TspRI CASTG 3 cut(s) 616, 1505, 1616
VpaK11BI GGWCC 2 cut(s) 1335, 1712
XapI RAATTY 8 cut(s) 209, 462, 908, 1114, 1263, 1372, 1485, 1569
XbaI TCTAGA 2 cut(s) 1516, 1721
XceI RCATGY 1 cut(s) 307
XcmI CCANNNNNNNNNTGG 1 cut(s) 648
XmaJI CCTAGG 1 cut(s) 1153
XmnI GAANNNNTTC 1 cut(s) 1179
XspI CTAG 8 cut(s) 56, 1154, 1241, 1517, 1722, 1731, 1739, 1745
Using CommOnly database (standard laboratory enzymes). Scanned on CDS sequence.